Pre-mRNA-splicing factor cwc25
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G44195 AT2G44200 |
| fragaria_vesca | FvH4_4g13451 |
| malus_domestica | MD04G1014200.v1.1 |
| prunus_persica | Prupe.1G161200_v2.0.a1 Prupe.1G161200_v2.0.a1 Prupe.1G161200_v2.0.a1 Prupe.1G161200_v2.0.a1 Prupe.1G161200_v2.0.a1 Prupe.1G161200_v2.0.a1 Prupe.1G161200_v2.0.a1 Prupe.1G161500_v2.0.a1 Prupe.1G161500_v2.0.a1 Prupe.1G161500_v2.0.a1 Prupe.1G162300_v2.0.a1 |
| pyrus_communis | pycom04g01100 |
| rosa_chinensis | RchiOBHm_Chr4g0414011 |
| rosa_laevigata | RLG00000008185 |
| rosa_multiflora | Rmu_sc0003264.1_g000022 Rmu_sc0006428.1_g000008 |
| rosa_roxburghii | Rroxscaffold_5G00357930 |
| rosa_rugosa | Rorug04G0125000 |
| rosa_samantha | Rh4AG183500 Rh4BG183000 Rh4CG195500 Rh4DG178800 |
| rosa_wichuraiana | Rw4G015600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1820 |
| Acc36I | ACCTGC | 2 cut(s) | 1809, 1820 |
| AccB1I | GGYRCC | 2 cut(s) | 237, 1551 |
| AccII | CGCG | 3 cut(s) | 141, 159, 314 |
| AccIII | TCCGGA | 1 cut(s) | 221 |
| AclI | AACGTT | 1 cut(s) | 1651 |
| AclWI | GGATC | 3 cut(s) | 398, 411, 458 |
| AcoI | YGGCCR | 1 cut(s) | 228 |
| AcsI | RAATTY | 2 cut(s) | 11, 1717 |
| AcuI | CTGAAG | 3 cut(s) | 819, 1230, 1845 |
| AcvI | CACGTG | 1 cut(s) | 761 |
| AcyI | GRCGYC | 2 cut(s) | 238, 1552 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 447, 1548 |
| AgsI | TTSAA | 5 cut(s) | 497, 567, 737, 1657, 1736 |
| AhlI | ACTAGT | 1 cut(s) | 1739 |
| AjiI | CACGTC | 1 cut(s) | 749 |
| AjnI | CCWGG | 4 cut(s) | 165, 777, 1315, 1692 |
| Alw21I | GWGCWC | 5 cut(s) | 117, 165, 760, 883, 1423 |
| AlwI | GGATC | 3 cut(s) | 398, 411, 458 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 332, 797, 1151, 1208 |
| Aor13HI | TCCGGA | 1 cut(s) | 221 |
| AoxI | GGCC | 6 cut(s) | 72, 178, 228, 438, 780, 1528 |
| ApeKI | GCWGC | 4 cut(s) | 302, 305, 424, 1592 |
| ApoI | RAATTY | 2 cut(s) | 11, 1717 |
| AspLEI | GCGC | 3 cut(s) | 240, 337, 1554 |
| AspS9I | GGNCC | 1 cut(s) | 439 |
| AsuC2I | CCSGG | 2 cut(s) | 243, 339 |
| AsuHPI | GGTGA | 2 cut(s) | 265, 1844 |
| BamHI | GGATCC | 1 cut(s) | 403 |
| BanI | GGYRCC | 2 cut(s) | 237, 1551 |
| BanII | GRGCYC | 3 cut(s) | 117, 165, 346 |
| BbrPI | CACGTG | 1 cut(s) | 761 |
| BbsI | GAAGAC | 1 cut(s) | 975 |
| Bbv12I | GWGCWC | 5 cut(s) | 117, 165, 760, 883, 1423 |
| BbvI | GCAGC | 4 cut(s) | 289, 292, 436, 1579 |
| BccI | CCATC | 4 cut(s) | 24, 466, 1397, 1638 |
| BceAI | ACGGC | 1 cut(s) | 215 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 109, 143, 1658, 1692 |
| BciT130I | CCWGG | 4 cut(s) | 167, 779, 1317, 1694 |
| BcnI | CCSGG | 2 cut(s) | 243, 339 |
| BcuI | ACTAGT | 1 cut(s) | 1739 |
| BfaI | CTAG | 1 cut(s) | 1740 |
| BfmI | CTRYAG | 1 cut(s) | 1446 |
| BfoI | RGCGCY | 2 cut(s) | 241, 1555 |
| BfuAI | ACCTGC | 2 cut(s) | 1809, 1820 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 246 |
| BglII | AGATCT | 1 cut(s) | 1703 |
| Bme1390I | CCNGG | 6 cut(s) | 167, 243, 339, 779, 1317, 1694 |
| BmgBI | CACGTC | 1 cut(s) | 749 |
| BmgT120I | GGNCC | 1 cut(s) | 439 |
| BmiI | GGNNCC | 4 cut(s) | 44, 239, 405, 1553 |
| BmrFI | CCNGG | 6 cut(s) | 167, 243, 339, 779, 1317, 1694 |
| BpiI | GAAGAC | 1 cut(s) | 975 |
| BpmI | CTGGAG | 1 cut(s) | 149 |
| BpuEI | CTTGAG | 1 cut(s) | 245 |
| BpuMI | CCSGG | 2 cut(s) | 243, 339 |
| BsaAI | YACGTR | 1 cut(s) | 761 |
| BsaHI | GRCGYC | 2 cut(s) | 238, 1552 |
| BsaWI | WCCGGW | 1 cut(s) | 221 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 447, 1548 |
| Bse118I | RCCGGY | 1 cut(s) | 176 |
| Bse3DI | GCAATG | 1 cut(s) | 1846 |
| BseAI | TCCGGA | 1 cut(s) | 221 |
| BseBI | CCWGG | 4 cut(s) | 167, 779, 1317, 1694 |
| BseGI | GGATG | 5 cut(s) | 12, 35, 682, 1162, 1732 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 447, 1548 |
| BseMI | GCAATG | 1 cut(s) | 1846 |
| BseMII | CTCAG | 4 cut(s) | 380, 1143, 1614, 1826 |
| BseRI | GAGGAG | 1 cut(s) | 1796 |
| BseXI | GCAGC | 4 cut(s) | 289, 292, 436, 1579 |
| Bsh1236I | CGCG | 3 cut(s) | 141, 159, 314 |
| BshFI | GGCC | 6 cut(s) | 74, 180, 230, 440, 782, 1530 |
| BshNI | GGYRCC | 2 cut(s) | 237, 1551 |
| BsiHKAI | GWGCWC | 5 cut(s) | 117, 165, 760, 883, 1423 |
| BsiSI | CCGG | 4 cut(s) | 177, 222, 243, 338 |
| BslFI | GGGAC | 1 cut(s) | 170 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 447, 1548 |
| BsmFI | GGGAC | 1 cut(s) | 170 |
| BsmI | GAATGC | 6 cut(s) | 661, 847, 1141, 1198, 1261, 1324 |
| BsnI | GGCC | 6 cut(s) | 74, 180, 230, 440, 782, 1530 |
| Bsp1286I | GDGCHC | 6 cut(s) | 117, 165, 346, 760, 883, 1423 |
| Bsp13I | TCCGGA | 1 cut(s) | 221 |
| Bsp143I | GATC | 4 cut(s) | 126, 403, 450, 1703 |
| BspANI | GGCC | 6 cut(s) | 74, 180, 230, 440, 782, 1530 |
| BspCNI | CTCAG | 4 cut(s) | 379, 1144, 1615, 1825 |
| BspEI | TCCGGA | 1 cut(s) | 221 |
| BspFNI | CGCG | 3 cut(s) | 141, 159, 314 |
| BspHI | TCATGA | 1 cut(s) | 685 |
| BspLI | GGNNCC | 4 cut(s) | 44, 239, 405, 1553 |
| BspMI | ACCTGC | 2 cut(s) | 1809, 1820 |
| BspPI | GGATC | 3 cut(s) | 398, 411, 458 |
| BspQI | GCTCTTC | 1 cut(s) | 279 |
| BspT107I | GGYRCC | 2 cut(s) | 237, 1551 |
| BsrDI | GCAATG | 1 cut(s) | 1846 |
| BsrFI | RCCGGY | 1 cut(s) | 176 |
| BssAI | RCCGGY | 1 cut(s) | 176 |
| BssMI | GATC | 4 cut(s) | 126, 403, 450, 1703 |
| BssNI | GRCGYC | 2 cut(s) | 238, 1552 |
| Bst2UI | CCWGG | 4 cut(s) | 167, 779, 1317, 1694 |
| Bst6I | CTCTTC | 3 cut(s) | 90, 279, 1522 |
| BstACI | GRCGYC | 2 cut(s) | 238, 1552 |
| BstBAI | YACGTR | 1 cut(s) | 761 |
| BstC8I | GCNNGC | 6 cut(s) | 87, 122, 161, 174, 178, 957 |
| BstDEI | CTNAG | 4 cut(s) | 366, 1152, 1623, 1812 |
| BstDSI | CCRYGG | 6 cut(s) | 231, 1006, 1069, 1132, 1189, 1252 |
| BstEII | GGTNACC | 1 cut(s) | 833 |
| BstF5I | GGATG | 5 cut(s) | 12, 35, 682, 1162, 1732 |
| BstFNI | CGCG | 3 cut(s) | 141, 159, 314 |
| BstH2I | RGCGCY | 2 cut(s) | 241, 1555 |
| BstHHI | GCGC | 3 cut(s) | 240, 337, 1554 |
| BstKTI | GATC | 4 cut(s) | 129, 406, 453, 1706 |
| BstMBI | GATC | 4 cut(s) | 126, 403, 450, 1703 |
| BstNI | CCWGG | 4 cut(s) | 167, 779, 1317, 1694 |
| BstNSI | RCATGY | 1 cut(s) | 959 |
| BstPI | GGTNACC | 1 cut(s) | 833 |
| BstSCI | CCNGG | 6 cut(s) | 165, 241, 337, 777, 1315, 1692 |
| BstSFI | CTRYAG | 1 cut(s) | 1446 |
| BstUI | CGCG | 3 cut(s) | 141, 159, 314 |
| BstV1I | GCAGC | 4 cut(s) | 289, 292, 436, 1579 |
| BstV2I | GAAGAC | 1 cut(s) | 975 |
| BstX2I | RGATCY | 2 cut(s) | 403, 1703 |
| BstYI | RGATCY | 2 cut(s) | 403, 1703 |
| BsuRI | GGCC | 6 cut(s) | 74, 180, 230, 440, 782, 1530 |
| BtgI | CCRYGG | 6 cut(s) | 231, 1006, 1069, 1132, 1189, 1252 |
| BtrI | CACGTC | 1 cut(s) | 749 |
| BtsCI | GGATG | 5 cut(s) | 12, 35, 682, 1162, 1732 |
| BveI | ACCTGC | 2 cut(s) | 1809, 1820 |
| Cac8I | GCNNGC | 6 cut(s) | 87, 122, 161, 174, 178, 957 |
| CaiI | CAGNNNCTG | 4 cut(s) | 332, 797, 1151, 1208 |
| CciI | TCATGA | 1 cut(s) | 685 |
| CfoI | GCGC | 3 cut(s) | 240, 337, 1554 |
| Cfr10I | RCCGGY | 1 cut(s) | 176 |
| Cfr13I | GGNCC | 1 cut(s) | 439 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 805, 840 |
| CviAII | CATG | 6 cut(s) | 686, 839, 956, 1442, 1493, 1631 |
| DdeI | CTNAG | 4 cut(s) | 366, 1152, 1623, 1812 |
| DinI | GGCGCC | 2 cut(s) | 239, 1553 |
| DpnI | GATC | 4 cut(s) | 128, 405, 452, 1705 |
| DpnII | GATC | 4 cut(s) | 126, 403, 450, 1703 |
| EaeI | YGGCCR | 1 cut(s) | 228 |
| Eam1104I | CTCTTC | 3 cut(s) | 90, 279, 1522 |
| EarI | CTCTTC | 3 cut(s) | 90, 279, 1522 |
| Ecl136II | GAGCTC | 2 cut(s) | 115, 163 |
| Eco24I | GRGCYC | 3 cut(s) | 117, 165, 346 |
| Eco53kI | GAGCTC | 2 cut(s) | 115, 163 |
| Eco57I | CTGAAG | 3 cut(s) | 819, 1230, 1845 |
| Eco72I | CACGTG | 1 cut(s) | 761 |
| Eco91I | GGTNACC | 1 cut(s) | 833 |
| EcoICRI | GAGCTC | 2 cut(s) | 115, 163 |
| EcoO109I | RGGNCCY | 1 cut(s) | 439 |
| EcoO65I | GGTNACC | 1 cut(s) | 833 |
| EcoRII | CCWGG | 4 cut(s) | 165, 777, 1315, 1692 |
| EcoT22I | ATGCAT | 2 cut(s) | 868, 1846 |
| EcoT38I | GRGCYC | 3 cut(s) | 117, 165, 346 |
| EgeI | GGCGCC | 2 cut(s) | 239, 1553 |
| EheI | GGCGCC | 2 cut(s) | 239, 1553 |
| FaeI | CATG | 6 cut(s) | 689, 842, 959, 1445, 1496, 1634 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 254, 286, 1203, 1235, 1408, 1440, 1706, 1738 |
| FaqI | GGGAC | 1 cut(s) | 170 |
| FatI | CATG | 6 cut(s) | 685, 838, 955, 1441, 1492, 1630 |
| FokI | GGATG | 5 cut(s) | 19, 42, 689, 1169, 1739 |
| FriOI | GRGCYC | 3 cut(s) | 117, 165, 346 |
| FspBI | CTAG | 1 cut(s) | 1740 |
| GlaI | GCGC | 3 cut(s) | 239, 336, 1553 |
| GsuI | CTGGAG | 1 cut(s) | 149 |
| HaeII | RGCGCY | 2 cut(s) | 241, 1555 |
| HaeIII | GGCC | 6 cut(s) | 74, 180, 230, 440, 782, 1530 |
| HapII | CCGG | 4 cut(s) | 177, 222, 243, 338 |
| HhaI | GCGC | 3 cut(s) | 240, 337, 1554 |
| Hin1I | GRCGYC | 2 cut(s) | 238, 1552 |
| Hin1II | CATG | 6 cut(s) | 689, 842, 959, 1445, 1496, 1634 |
| Hin6I | GCGC | 3 cut(s) | 238, 335, 1552 |
| HinP1I | GCGC | 3 cut(s) | 238, 335, 1552 |
| HindIII | AAGCTT | 2 cut(s) | 392, 1217 |
| HpaII | CCGG | 4 cut(s) | 177, 222, 243, 338 |
| HphI | GGTGA | 2 cut(s) | 265, 1844 |
| Hpy166II | GTNNAC | 1 cut(s) | 488 |
| Hpy188III | TCNNGA | 6 cut(s) | 58, 67, 222, 454, 469, 686 |
| Hpy8I | GTNNAC | 1 cut(s) | 488 |
| Hpy99I | CGWCG | 4 cut(s) | 113, 134, 1797, 1854 |
| HpyAV | CCTTC | 9 cut(s) | 19, 64, 280, 300, 310, 526, 1434, 1654, 1753 |
| HpyCH4IV | ACGT | 6 cut(s) | 63, 584, 748, 760, 823, 1651 |
| HpyCH4V | TGCA | 5 cut(s) | 866, 959, 1612, 1679, 1844 |
| HpyF3I | CTNAG | 4 cut(s) | 366, 1152, 1623, 1812 |
| HpySE526I | ACGT | 6 cut(s) | 63, 584, 748, 760, 823, 1651 |
| Hsp92I | GRCGYC | 2 cut(s) | 238, 1552 |
| Hsp92II | CATG | 6 cut(s) | 689, 842, 959, 1445, 1496, 1634 |
| HspAI | GCGC | 3 cut(s) | 238, 335, 1552 |
| KasI | GGCGCC | 2 cut(s) | 237, 1551 |
| Kpn2I | TCCGGA | 1 cut(s) | 221 |
| KroI | GCCGGC | 1 cut(s) | 176 |
| KroNI | GCCGGC | 1 cut(s) | 178 |
| Kzo9I | GATC | 4 cut(s) | 126, 403, 450, 1703 |
| LguI | GCTCTTC | 1 cut(s) | 279 |
| LmnI | GCTCC | 5 cut(s) | 42, 120, 152, 168, 169 |
| Lsp1109I | GCAGC | 4 cut(s) | 289, 292, 436, 1579 |
| MaeI | CTAG | 1 cut(s) | 1740 |
| MaeII | ACGT | 6 cut(s) | 63, 584, 748, 760, 823, 1651 |
| MaeIII | GTNAC | 3 cut(s) | 524, 812, 833 |
| MalI | GATC | 4 cut(s) | 128, 405, 452, 1705 |
| MboI | GATC | 4 cut(s) | 126, 403, 450, 1703 |
| MflI | RGATCY | 2 cut(s) | 403, 1703 |
| MhlI | GDGCHC | 6 cut(s) | 117, 165, 346, 760, 883, 1423 |
| MluCI | AATT | 4 cut(s) | 11, 668, 806, 1717 |
| Mly113I | GGCGCC | 2 cut(s) | 238, 1552 |
| Mph1103I | ATGCAT | 2 cut(s) | 868, 1846 |
| MroI | TCCGGA | 1 cut(s) | 221 |
| MroNI | GCCGGC | 1 cut(s) | 176 |
| MseI | TTAA | 4 cut(s) | 420, 657, 720, 951 |
| MslI | CAYNNNNRTG | 3 cut(s) | 702, 888, 933 |
| MspA1I | CMGCKG | 2 cut(s) | 302, 608 |
| MspI | CCGG | 4 cut(s) | 177, 222, 243, 338 |
| MspR9I | CCNGG | 6 cut(s) | 167, 243, 339, 779, 1317, 1694 |
| Mva1269I | GAATGC | 6 cut(s) | 661, 847, 1141, 1198, 1261, 1324 |
| MvaI | CCWGG | 4 cut(s) | 167, 779, 1317, 1694 |
| MvnI | CGCG | 3 cut(s) | 141, 159, 314 |
| NaeI | GCCGGC | 1 cut(s) | 178 |
| NarI | GGCGCC | 2 cut(s) | 238, 1552 |
| NciI | CCSGG | 2 cut(s) | 243, 339 |
| NdeII | GATC | 4 cut(s) | 126, 403, 450, 1703 |
| NgoMIV | GCCGGC | 1 cut(s) | 176 |
| NlaIII | CATG | 6 cut(s) | 689, 842, 959, 1445, 1496, 1634 |
| NlaIV | GGNNCC | 4 cut(s) | 44, 239, 405, 1553 |
| NmeAIII | GCCGAG | 2 cut(s) | 100, 1576 |
| NmuCI | GTSAC | 1 cut(s) | 524 |
| NsiI | ATGCAT | 2 cut(s) | 868, 1846 |
| NspI | RCATGY | 1 cut(s) | 959 |
| PaeI | GCATGC | 1 cut(s) | 959 |
| PagI | TCATGA | 1 cut(s) | 685 |
| PaqCI | CACCTGC | 1 cut(s) | 1820 |
| PciSI | GCTCTTC | 1 cut(s) | 279 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 138 |
| PctI | GAATGC | 6 cut(s) | 661, 847, 1141, 1198, 1261, 1324 |
| PdiI | GCCGGC | 1 cut(s) | 178 |
| PfoI | TCCNGGA | 1 cut(s) | 165 |
| PluTI | GGCGCC | 2 cut(s) | 241, 1555 |
| PmaCI | CACGTG | 1 cut(s) | 761 |
| PmlI | CACGTG | 1 cut(s) | 761 |
| Ppu21I | YACGTR | 1 cut(s) | 761 |
| Psp124BI | GAGCTC | 2 cut(s) | 117, 165 |
| Psp1406I | AACGTT | 1 cut(s) | 1651 |
| Psp6I | CCWGG | 4 cut(s) | 165, 777, 1315, 1692 |
| PspCI | CACGTG | 1 cut(s) | 761 |
| PspEI | GGTNACC | 1 cut(s) | 833 |
| PspGI | CCWGG | 4 cut(s) | 165, 777, 1315, 1692 |
| PspN4I | GGNNCC | 4 cut(s) | 44, 239, 405, 1553 |
| PspPI | GGNCC | 1 cut(s) | 439 |
| PstNI | CAGNNNCTG | 4 cut(s) | 332, 797, 1151, 1208 |
| PsuI | RGATCY | 2 cut(s) | 403, 1703 |
| PvuII | CAGCTG | 1 cut(s) | 608 |
| RseI | CAYNNNNRTG | 3 cut(s) | 702, 888, 933 |
| SacI | GAGCTC | 2 cut(s) | 117, 165 |
| SapI | GCTCTTC | 1 cut(s) | 279 |
| SaqAI | TTAA | 4 cut(s) | 420, 657, 720, 951 |
| Sau3AI | GATC | 4 cut(s) | 126, 403, 450, 1703 |
| Sau96I | GGNCC | 1 cut(s) | 439 |
| ScrFI | CCNGG | 6 cut(s) | 167, 243, 339, 779, 1317, 1694 |
| SduI | GDGCHC | 6 cut(s) | 117, 165, 346, 760, 883, 1423 |
| SfcI | CTRYAG | 1 cut(s) | 1446 |
| SfoI | GGCGCC | 2 cut(s) | 239, 1553 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 702, 888, 933 |
| SmlI | CTYRAG | 1 cut(s) | 260 |
| SmoI | CTYRAG | 1 cut(s) | 260 |
| SpeI | ACTAGT | 1 cut(s) | 1739 |
| SphI | GCATGC | 1 cut(s) | 959 |
| Sse9I | AATT | 4 cut(s) | 11, 668, 806, 1717 |
| SspDI | GGCGCC | 2 cut(s) | 237, 1551 |
| SspMI | CTAG | 1 cut(s) | 1740 |
| SstI | GAGCTC | 2 cut(s) | 117, 165 |
| StyD4I | CCNGG | 6 cut(s) | 165, 241, 337, 777, 1315, 1692 |
| TaiI | ACGT | 6 cut(s) | 66, 587, 751, 763, 826, 1654 |
| TasI | AATT | 4 cut(s) | 11, 668, 806, 1717 |
| TauI | GCSGC | 6 cut(s) | 92, 249, 311, 314, 356, 1713 |
| Tru1I | TTAA | 4 cut(s) | 420, 657, 720, 951 |
| Tru9I | TTAA | 4 cut(s) | 420, 657, 720, 951 |
| TseFI | GTSAC | 1 cut(s) | 524 |
| TseI | GCWGC | 4 cut(s) | 302, 305, 424, 1592 |
| Tsp45I | GTSAC | 1 cut(s) | 524 |
| TspDTI | ATGAA | 8 cut(s) | 23, 693, 702, 756, 819, 1211, 1509, 1647 |
| TspGWI | ACGGA | 1 cut(s) | 1781 |
| XapI | RAATTY | 2 cut(s) | 11, 1717 |
| XceI | RCATGY | 1 cut(s) | 959 |
| XspI | CTAG | 1 cut(s) | 1740 |
| Zsp2I | ATGCAT | 2 cut(s) | 868, 1846 |