Pre-mRNA-splicing factor cwc25
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G44195 AT2G44200 |
| fragaria_vesca | FvH4_4g13451 |
| malus_domestica | MD04G1014200.v1.1 |
| prunus_persica | Prupe.1G161200_v2.0.a1 Prupe.1G161200_v2.0.a1 Prupe.1G161200_v2.0.a1 Prupe.1G161200_v2.0.a1 Prupe.1G161200_v2.0.a1 Prupe.1G161200_v2.0.a1 Prupe.1G161200_v2.0.a1 Prupe.1G161500_v2.0.a1 Prupe.1G161500_v2.0.a1 Prupe.1G161500_v2.0.a1 Prupe.1G162300_v2.0.a1 |
| pyrus_communis | pycom04g01100 |
| rosa_chinensis | RchiOBHm_Chr4g0414011 |
| rosa_laevigata | RLG00000008185 |
| rosa_multiflora | Rmu_sc0003264.1_g000022 Rmu_sc0006428.1_g000008 |
| rosa_roxburghii | Rroxscaffold_5G00357930 |
| rosa_rugosa | Rorug04G0125000 |
| rosa_samantha | Rh4AG183500 Rh4BG183000 Rh4CG195500 Rh4DG178800 |
| rosa_wichuraiana | Rw4G015600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1544 |
| Acc36I | ACCTGC | 2 cut(s) | 1533, 1544 |
| AccB1I | GGYRCC | 1 cut(s) | 237 |
| AccIII | TCCGGA | 2 cut(s) | 48, 221 |
| AciI | CCGC | 9 cut(s) | 74, 90, 118, 246, 303, 306, 312, 321, 1434 |
| AclI | AACGTT | 1 cut(s) | 1375 |
| AclWI | GGATC | 4 cut(s) | 141, 407, 420, 467 |
| AcoI | YGGCCR | 1 cut(s) | 228 |
| AcsI | RAATTY | 2 cut(s) | 1222, 1441 |
| AcuI | CTGAAG | 2 cut(s) | 828, 1569 |
| AcyI | GRCGYC | 1 cut(s) | 238 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 456, 1176 |
| AflIII | ACRYGT | 1 cut(s) | 63 |
| AgsI | TTSAA | 7 cut(s) | 10, 262, 506, 576, 746, 1245, 1381 |
| AhlI | ACTAGT | 1 cut(s) | 1463 |
| AjiI | CACGTC | 2 cut(s) | 896, 1148 |
| AjnI | CCWGG | 2 cut(s) | 165, 241 |
| Alw21I | GWGCWC | 5 cut(s) | 117, 165, 769, 895, 1147 |
| Alw26I | GTCTC | 1 cut(s) | 1151 |
| AlwI | GGATC | 4 cut(s) | 141, 407, 420, 467 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 806 |
| Aor13HI | TCCGGA | 2 cut(s) | 48, 221 |
| AoxI | GGCC | 2 cut(s) | 178, 228 |
| ApeKI | GCWGC | 6 cut(s) | 308, 314, 341, 362, 433, 1316 |
| ApoI | RAATTY | 2 cut(s) | 1222, 1441 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 114, 146 |
| AspLEI | GCGC | 2 cut(s) | 240, 346 |
| AsuC2I | CCSGG | 2 cut(s) | 40, 348 |
| AsuHPI | GGTGA | 2 cut(s) | 265, 1568 |
| AxyI | CCTNAGG | 1 cut(s) | 519 |
| BamHI | GGATCC | 1 cut(s) | 412 |
| BanI | GGYRCC | 1 cut(s) | 237 |
| BanII | GRGCYC | 3 cut(s) | 117, 165, 355 |
| BauI | CACGAG | 1 cut(s) | 1404 |
| BbsI | GAAGAC | 3 cut(s) | 285, 1131, 1219 |
| Bbv12I | GWGCWC | 5 cut(s) | 117, 165, 769, 895, 1147 |
| BbvI | GCAGC | 6 cut(s) | 295, 301, 328, 374, 445, 1303 |
| BccI | CCATC | 4 cut(s) | 475, 932, 1333, 1362 |
| BceAI | ACGGC | 1 cut(s) | 215 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 109, 143, 1382, 1416 |
| BciT130I | CCWGG | 2 cut(s) | 167, 243 |
| BciVI | GTATCC | 1 cut(s) | 868 |
| BcnI | CCSGG | 2 cut(s) | 40, 348 |
| BcoDI | GTCTC | 1 cut(s) | 1151 |
| BcuI | ACTAGT | 1 cut(s) | 1463 |
| BfaI | CTAG | 2 cut(s) | 1320, 1464 |
| BfoI | RGCGCY | 1 cut(s) | 241 |
| BfuAI | ACCTGC | 2 cut(s) | 1533, 1544 |
| BfuI | GTATCC | 1 cut(s) | 868 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 246 |
| BglII | AGATCT | 1 cut(s) | 1427 |
| Bme1390I | CCNGG | 4 cut(s) | 40, 167, 243, 348 |
| BmgBI | CACGTC | 2 cut(s) | 896, 1148 |
| BmiI | GGNNCC | 3 cut(s) | 44, 239, 414 |
| BmrFI | CCNGG | 4 cut(s) | 40, 167, 243, 348 |
| BmsI | GCATC | 7 cut(s) | 341, 379, 662, 1323, 1333, 1390, 1441 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1191 |
| BpiI | GAAGAC | 3 cut(s) | 285, 1131, 1219 |
| BpmI | CTGGAG | 1 cut(s) | 149 |
| Bpu10I | CCTNAGC | 1 cut(s) | 324 |
| BpuMI | CCSGG | 2 cut(s) | 40, 348 |
| BsaAI | YACGTR | 1 cut(s) | 833 |
| BsaHI | GRCGYC | 1 cut(s) | 238 |
| BsaJI | CCNNGG | 4 cut(s) | 241, 347, 976, 1039 |
| BsaWI | WCCGGW | 3 cut(s) | 48, 221, 582 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 456, 1176 |
| Bse118I | RCCGGY | 1 cut(s) | 176 |
| Bse21I | CCTNAGG | 1 cut(s) | 519 |
| Bse3DI | GCAATG | 1 cut(s) | 1570 |
| BseAI | TCCGGA | 2 cut(s) | 48, 221 |
| BseBI | CCWGG | 2 cut(s) | 167, 243 |
| BseDI | CCNNGG | 4 cut(s) | 241, 347, 976, 1039 |
| BseGI | GGATG | 3 cut(s) | 691, 1348, 1456 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 456, 1176 |
| BseMI | GCAATG | 1 cut(s) | 1570 |
| BseMII | CTCAG | 3 cut(s) | 389, 705, 1338 |
| BseRI | GAGGAG | 1 cut(s) | 1520 |
| BseXI | GCAGC | 6 cut(s) | 295, 301, 328, 374, 445, 1303 |
| BshFI | GGCC | 2 cut(s) | 180, 230 |
| BshNI | GGYRCC | 1 cut(s) | 237 |
| BsiHKAI | GWGCWC | 5 cut(s) | 117, 165, 769, 895, 1147 |
| BsiSI | CCGG | 6 cut(s) | 39, 49, 177, 222, 347, 583 |
| BslFI | GGGAC | 1 cut(s) | 170 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 456, 1176 |
| BsmAI | GTCTC | 1 cut(s) | 1151 |
| BsmFI | GGGAC | 1 cut(s) | 170 |
| BsmI | GAATGC | 6 cut(s) | 670, 859, 922, 985, 1048, 1111 |
| BsnI | GGCC | 2 cut(s) | 180, 230 |
| Bsp1286I | GDGCHC | 6 cut(s) | 117, 165, 355, 769, 895, 1147 |
| Bsp13I | TCCGGA | 2 cut(s) | 48, 221 |
| Bsp143I | GATC | 6 cut(s) | 126, 146, 412, 459, 1162, 1427 |
| BspACI | CCGC | 9 cut(s) | 74, 90, 118, 246, 303, 306, 312, 321, 1434 |
| BspANI | GGCC | 2 cut(s) | 180, 230 |
| BspCNI | CTCAG | 3 cut(s) | 388, 706, 1339 |
| BspEI | TCCGGA | 2 cut(s) | 48, 221 |
| BspLI | GGNNCC | 3 cut(s) | 44, 239, 414 |
| BspMI | ACCTGC | 2 cut(s) | 1533, 1544 |
| BspPI | GGATC | 4 cut(s) | 141, 407, 420, 467 |
| BspT107I | GGYRCC | 1 cut(s) | 237 |
| BsrDI | GCAATG | 1 cut(s) | 1570 |
| BsrFI | RCCGGY | 1 cut(s) | 176 |
| BssAI | RCCGGY | 1 cut(s) | 176 |
| BssECI | CCNNGG | 4 cut(s) | 241, 347, 976, 1039 |
| BssMI | GATC | 6 cut(s) | 126, 146, 412, 459, 1162, 1427 |
| BssNI | GRCGYC | 1 cut(s) | 238 |
| BssSI | CACGAG | 1 cut(s) | 1404 |
| Bst2BI | CACGAG | 1 cut(s) | 1404 |
| Bst2UI | CCWGG | 2 cut(s) | 167, 243 |
| Bst4CI | ACNGT | 7 cut(s) | 291, 563, 914, 977, 1040, 1193, 1578 |
| Bst6I | CTCTTC | 1 cut(s) | 90 |
| BstACI | GRCGYC | 1 cut(s) | 238 |
| BstBAI | YACGTR | 1 cut(s) | 833 |
| BstC8I | GCNNGC | 5 cut(s) | 87, 174, 178, 769, 983 |
| BstDEI | CTNAG | 6 cut(s) | 324, 375, 519, 714, 792, 1347 |
| BstDSI | CCRYGG | 2 cut(s) | 976, 1039 |
| BstF5I | GGATG | 3 cut(s) | 691, 1348, 1456 |
| BstH2I | RGCGCY | 1 cut(s) | 241 |
| BstHHI | GCGC | 2 cut(s) | 240, 346 |
| BstKTI | GATC | 6 cut(s) | 129, 149, 415, 462, 1165, 1430 |
| BstMAI | GTCTC | 1 cut(s) | 1151 |
| BstMBI | GATC | 6 cut(s) | 126, 146, 412, 459, 1162, 1427 |
| BstNI | CCWGG | 2 cut(s) | 167, 243 |
| BstNSI | RCATGY | 1 cut(s) | 1106 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1191 |
| BstSCI | CCNGG | 4 cut(s) | 38, 165, 241, 346 |
| BstV1I | GCAGC | 6 cut(s) | 295, 301, 328, 374, 445, 1303 |
| BstV2I | GAAGAC | 3 cut(s) | 285, 1131, 1219 |
| BstX2I | RGATCY | 2 cut(s) | 412, 1427 |
| BstYI | RGATCY | 2 cut(s) | 412, 1427 |
| Bsu36I | CCTNAGG | 1 cut(s) | 519 |
| BsuI | GTATCC | 1 cut(s) | 868 |
| BsuRI | GGCC | 2 cut(s) | 180, 230 |
| BtgI | CCRYGG | 2 cut(s) | 976, 1039 |
| BtrI | CACGTC | 2 cut(s) | 896, 1148 |
| BtsCI | GGATG | 3 cut(s) | 691, 1348, 1456 |
| BveI | ACCTGC | 2 cut(s) | 1533, 1544 |
| Cac8I | GCNNGC | 5 cut(s) | 87, 174, 178, 769, 983 |
| CaiI | CAGNNNCTG | 1 cut(s) | 806 |
| CfoI | GCGC | 2 cut(s) | 240, 346 |
| Cfr10I | RCCGGY | 1 cut(s) | 176 |
| CseI | GACGC | 1 cut(s) | 1265 |
| CviAII | CATG | 9 cut(s) | 393, 695, 725, 788, 851, 1103, 1166, 1217, 1355 |
| DdeI | CTNAG | 6 cut(s) | 324, 375, 519, 714, 792, 1347 |
| DinI | GGCGCC | 1 cut(s) | 239 |
| DpnI | GATC | 6 cut(s) | 128, 148, 414, 461, 1164, 1429 |
| DpnII | GATC | 6 cut(s) | 126, 146, 412, 459, 1162, 1427 |
| EaeI | YGGCCR | 1 cut(s) | 228 |
| Eam1104I | CTCTTC | 1 cut(s) | 90 |
| EarI | CTCTTC | 1 cut(s) | 90 |
| EciI | GGCGGA | 2 cut(s) | 89, 292 |
| Ecl136II | GAGCTC | 2 cut(s) | 115, 163 |
| Eco24I | GRGCYC | 3 cut(s) | 117, 165, 355 |
| Eco53kI | GAGCTC | 2 cut(s) | 115, 163 |
| Eco57I | CTGAAG | 2 cut(s) | 828, 1569 |
| Eco81I | CCTNAGG | 1 cut(s) | 519 |
| EcoICRI | GAGCTC | 2 cut(s) | 115, 163 |
| EcoRII | CCWGG | 2 cut(s) | 165, 241 |
| EcoT22I | ATGCAT | 2 cut(s) | 394, 1570 |
| EcoT38I | GRGCYC | 3 cut(s) | 117, 165, 355 |
| EgeI | GGCGCC | 1 cut(s) | 239 |
| EheI | GGCGCC | 1 cut(s) | 239 |
| FaeI | CATG | 9 cut(s) | 396, 698, 728, 791, 854, 1106, 1169, 1220, 1358 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 254, 286, 1430, 1462 |
| FaqI | GGGAC | 1 cut(s) | 170 |
| FatI | CATG | 9 cut(s) | 392, 694, 724, 787, 850, 1102, 1165, 1216, 1354 |
| FokI | GGATG | 3 cut(s) | 698, 1355, 1463 |
| FriOI | GRGCYC | 3 cut(s) | 117, 165, 355 |
| FspBI | CTAG | 2 cut(s) | 1320, 1464 |
| GlaI | GCGC | 2 cut(s) | 239, 345 |
| GsuI | CTGGAG | 1 cut(s) | 149 |
| HaeII | RGCGCY | 1 cut(s) | 241 |
| HaeIII | GGCC | 2 cut(s) | 180, 230 |
| HapII | CCGG | 6 cut(s) | 39, 49, 177, 222, 347, 583 |
| HgaI | GACGC | 1 cut(s) | 1265 |
| HhaI | GCGC | 2 cut(s) | 240, 346 |
| Hin1I | GRCGYC | 1 cut(s) | 238 |
| Hin1II | CATG | 9 cut(s) | 396, 698, 728, 791, 854, 1106, 1169, 1220, 1358 |
| Hin6I | GCGC | 2 cut(s) | 238, 344 |
| HinP1I | GCGC | 2 cut(s) | 238, 344 |
| HindIII | AAGCTT | 1 cut(s) | 401 |
| HpaII | CCGG | 6 cut(s) | 39, 49, 177, 222, 347, 583 |
| HphI | GGTGA | 2 cut(s) | 265, 1568 |
| Hpy188III | TCNNGA | 4 cut(s) | 49, 222, 463, 478 |
| Hpy99I | CGWCG | 8 cut(s) | 113, 134, 900, 1152, 1193, 1281, 1521, 1578 |
| HpyAV | CCTTC | 6 cut(s) | 19, 64, 280, 535, 1378, 1477 |
| HpyCH4III | ACNGT | 7 cut(s) | 291, 563, 914, 977, 1040, 1193, 1578 |
| HpyCH4IV | ACGT | 7 cut(s) | 63, 593, 757, 832, 895, 1147, 1375 |
| HpyCH4V | TGCA | 6 cut(s) | 392, 1336, 1354, 1403, 1537, 1568 |
| HpyF3I | CTNAG | 6 cut(s) | 324, 375, 519, 714, 792, 1347 |
| HpySE526I | ACGT | 7 cut(s) | 63, 593, 757, 832, 895, 1147, 1375 |
| Hsp92I | GRCGYC | 1 cut(s) | 238 |
| Hsp92II | CATG | 9 cut(s) | 396, 698, 728, 791, 854, 1106, 1169, 1220, 1358 |
| HspAI | GCGC | 2 cut(s) | 238, 344 |
| KasI | GGCGCC | 1 cut(s) | 237 |
| Kpn2I | TCCGGA | 2 cut(s) | 48, 221 |
| KroI | GCCGGC | 1 cut(s) | 176 |
| KroNI | GCCGGC | 1 cut(s) | 178 |
| Kzo9I | GATC | 6 cut(s) | 126, 146, 412, 459, 1162, 1427 |
| LmnI | GCTCC | 5 cut(s) | 42, 76, 120, 168, 169 |
| Lsp1109I | GCAGC | 6 cut(s) | 295, 301, 328, 374, 445, 1303 |
| LweI | GCATC | 7 cut(s) | 341, 379, 662, 1323, 1333, 1390, 1441 |
| MaeI | CTAG | 2 cut(s) | 1320, 1464 |
| MaeII | ACGT | 7 cut(s) | 63, 593, 757, 832, 895, 1147, 1375 |
| MaeIII | GTNAC | 1 cut(s) | 533 |
| MalI | GATC | 6 cut(s) | 128, 148, 414, 461, 1164, 1429 |
| MboI | GATC | 6 cut(s) | 126, 146, 412, 459, 1162, 1427 |
| MflI | RGATCY | 2 cut(s) | 412, 1427 |
| MhlI | GDGCHC | 6 cut(s) | 117, 165, 355, 769, 895, 1147 |
| MluCI | AATT | 4 cut(s) | 256, 815, 1222, 1441 |
| Mly113I | GGCGCC | 1 cut(s) | 238 |
| Mph1103I | ATGCAT | 2 cut(s) | 394, 1570 |
| MroI | TCCGGA | 2 cut(s) | 48, 221 |
| MroNI | GCCGGC | 1 cut(s) | 176 |
| MseI | TTAA | 4 cut(s) | 429, 666, 918, 1458 |
| MspA1I | CMGCKG | 3 cut(s) | 308, 314, 617 |
| MspI | CCGG | 6 cut(s) | 39, 49, 177, 222, 347, 583 |
| MspR9I | CCNGG | 4 cut(s) | 40, 167, 243, 348 |
| Mva1269I | GAATGC | 6 cut(s) | 670, 859, 922, 985, 1048, 1111 |
| MvaI | CCWGG | 2 cut(s) | 167, 243 |
| NaeI | GCCGGC | 1 cut(s) | 178 |
| NarI | GGCGCC | 1 cut(s) | 238 |
| NciI | CCSGG | 2 cut(s) | 40, 348 |
| NdeII | GATC | 6 cut(s) | 126, 146, 412, 459, 1162, 1427 |
| NgoMIV | GCCGGC | 1 cut(s) | 176 |
| NlaIII | CATG | 9 cut(s) | 396, 698, 728, 791, 854, 1106, 1169, 1220, 1358 |
| NlaIV | GGNNCC | 3 cut(s) | 44, 239, 414 |
| NmuCI | GTSAC | 1 cut(s) | 533 |
| NsiI | ATGCAT | 2 cut(s) | 394, 1570 |
| NspI | RCATGY | 1 cut(s) | 1106 |
| PaqCI | CACCTGC | 1 cut(s) | 1544 |
| PctI | GAATGC | 6 cut(s) | 670, 859, 922, 985, 1048, 1111 |
| PdiI | GCCGGC | 1 cut(s) | 178 |
| PfoI | TCCNGGA | 1 cut(s) | 165 |
| PluTI | GGCGCC | 1 cut(s) | 241 |
| Ppu21I | YACGTR | 1 cut(s) | 833 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1191 |
| Psp124BI | GAGCTC | 2 cut(s) | 117, 165 |
| Psp1406I | AACGTT | 1 cut(s) | 1375 |
| Psp6I | CCWGG | 2 cut(s) | 165, 241 |
| PspGI | CCWGG | 2 cut(s) | 165, 241 |
| PspN4I | GGNNCC | 3 cut(s) | 44, 239, 414 |
| PstNI | CAGNNNCTG | 1 cut(s) | 806 |
| PsuI | RGATCY | 2 cut(s) | 412, 1427 |
| PvuII | CAGCTG | 1 cut(s) | 617 |
| SacI | GAGCTC | 2 cut(s) | 117, 165 |
| SaqAI | TTAA | 4 cut(s) | 429, 666, 918, 1458 |
| Sau3AI | GATC | 6 cut(s) | 126, 146, 412, 459, 1162, 1427 |
| ScrFI | CCNGG | 4 cut(s) | 40, 167, 243, 348 |
| SduI | GDGCHC | 6 cut(s) | 117, 165, 355, 769, 895, 1147 |
| SfaNI | GCATC | 7 cut(s) | 341, 379, 662, 1323, 1333, 1390, 1441 |
| SfoI | GGCGCC | 1 cut(s) | 239 |
| SpeI | ACTAGT | 1 cut(s) | 1463 |
| Sse9I | AATT | 4 cut(s) | 256, 815, 1222, 1441 |
| SsiI | CCGC | 9 cut(s) | 74, 90, 118, 246, 303, 306, 312, 321, 1434 |
| SspDI | GGCGCC | 1 cut(s) | 237 |
| SspMI | CTAG | 2 cut(s) | 1320, 1464 |
| SstI | GAGCTC | 2 cut(s) | 117, 165 |
| StyD4I | CCNGG | 4 cut(s) | 38, 165, 241, 346 |
| TaaI | ACNGT | 7 cut(s) | 291, 563, 914, 977, 1040, 1193, 1578 |
| TaiI | ACGT | 7 cut(s) | 66, 596, 760, 835, 898, 1150, 1378 |
| TasI | AATT | 4 cut(s) | 256, 815, 1222, 1441 |
| TauI | GCSGC | 4 cut(s) | 92, 249, 308, 314 |
| Tru1I | TTAA | 4 cut(s) | 429, 666, 918, 1458 |
| Tru9I | TTAA | 4 cut(s) | 429, 666, 918, 1458 |
| TseFI | GTSAC | 1 cut(s) | 533 |
| TseI | GCWGC | 6 cut(s) | 308, 314, 341, 362, 433, 1316 |
| Tsp45I | GTSAC | 1 cut(s) | 533 |
| TspDTI | ATGAA | 7 cut(s) | 702, 765, 828, 1080, 1233, 1275, 1371 |
| TspGWI | ACGGA | 2 cut(s) | 146, 1505 |
| XapI | RAATTY | 2 cut(s) | 1222, 1441 |
| XceI | RCATGY | 1 cut(s) | 1106 |
| XspI | CTAG | 2 cut(s) | 1320, 1464 |
| Zsp2I | ATGCAT | 2 cut(s) | 394, 1570 |