Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004688

Physical Location & Seq

Genomic Coordinates Reverse (-)

18552173 .. 18556674

Gene Structure 4502 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G44980.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2556 bp

ATGTCAAAAGAGAGTTCACCGCCAAAAGTCCCTTCCACGACGATGGAGTATGAACGGCGACTTGAAGCGGCGGCGGAAATTATACTCGAGAAGGAGGCGAAATTTAGCAACACACCTCCGGATTGTAGTGAATTTGGGGTCACGGCGACTCTAAAGCCTCACCAAGTCGAAGGTGTCTCTTGGCTTATACAGAAATATCTACTCGGCGTCAATGTCGTTCTCGAATTGGACCAGATGGGATTGGGAAAGACTCTCCAAGCAATCTCTTTCCTGAGTTATTTGAAGTTTCGTCAAGGCTTGCCTGGGCCATTTCTGGTGCTATGTCCCTTAAGTGTAACGGATGGTTGGGTATCAGAGATAAATAGGTTCACTCCAAATCTTGAAGTTCTTAGATATGTTGGCGATAAGTATTGCCGTCTGGATATGCGTAAGTCAATGTATGATCATGGACATTTCTTACCATTTGATGTATTGCTGACAACATATGACATAGCATTGGTGGATCAAGACTTTCTTTCTCAAATTCCTTGGCAATATGCTATAATTGATGAAGCTCAAAGACTCAAGAATCCTAACAGTGTTCTGTATAATGTCTTACTTGAGCAATTCCTCATTCCACGACGTCTCTTGATTACTGGCACACCTATCCAGAACAATCTTACCGAACTTTGGGCTCTGATGCATTTTTGCATGCCACTAGTTTTTGGGACACTGGACCAGTTCCTTTCCGCATTCAAAGAGACTGGGGACGGTCTTGATGTATCTAATGACAAGGAAACATATAAGAGTCTGAAGTTCATCTTAGGTGCCTTTATGCTGAGGCGTACAAAATCTTTGCTCATTGAGTCTGGAAATCTGGTGCTGCCACCTCTCACGGAGCTAACTGTAATGGTTCCGCTCGTCAGTCTTCAAAAGAAGATATATACTTCCATTTTGAGGAAAGAGCTTCCAGGGCTTCTTGAACTGTCTTCTGGAGGATCAAATCATACGTCTTTACAAAATATTGTGATACAGCTAAGAAAAGCATGTAGCCACCCTTACTTATTTCCAGGTATCGAACCAGAGCCTTTTGAAGAGGGTGAACACCTTGTTCAGGCAAGTGGTAAGCTTTTGGTTTTGGATCAATTGCTCAAAAGGCTCCATGATAGTGGCCATCGTGTCCTCCTCTTTTCCCAAATGACCTCAACACTTGACATTTTGCAGGATTTTATGGAGCTTCGTAGGTATTCGTATGAGCGCCTTGATGGATCAGTACGGGCTGAAGAACGTTTTGCTGCGATAAAGAATTTCAGCGTTGATGGAAGCAATGCCTTTGTTTTCATGATCTCTACAAGAGCAGGGGGAGTCGGTTTGAATCTTGTTGCTGCTGATACTGTTATATTTTATGAACAAGACTGGAACCCACAGGTGGATAAACAAGCTTTGCAACGAGCTCATCGAATTGGACAAATCAGTCATGTGCTGTCTATAAACCTCGTTACTGAACATTCTGTGGAAGAGGTTATTTTGAGGAGGGCAGAGAGAAAGTTGCAGCTTAGTCATAATGTTGTGGGAGATAACATGGAAGAGAAAGAAGAAGATGGTGGTGATTTGCGGTCTCTAGTGTTTGGTTTACAAAGGTTTGATCCCGAGGAGATTCACAATGAAGAGTCTGATAACCTGAAAATGGTAGAAATAAGTTCTCTTGCTGAGAAAGTTGTTGCAATACGTCAAAACGTTGAACCAGACAAGGAAGAAAGAAGGTTTGAAATTAATTCGAGCGACACTTTGCTAGGAAATACATCATCTGCAAGTCTGGATTCCGAGCTTGATGAAGCTTCTTACCTTTCATGGGTTGAGAAATTGAAGGAAGCTGCACGATCAAGCAAGGATGAAAAAATTATTGAGTTGGGAAATAGAAAGAACTTATCTGAGGAAAGAAATCTGAGAATTGAGGCTGCCAGGAAAAAGGCAGAAGAGAAGAAGTTAGCCACGTGGGGAGCACACGGTTATCAGTCTTTGTCCGTGGAAGAACCGATTTTGCCTGATGATGTTGATTCCAGCTCAGATGCAGGATCTGTTAACTTTGTCTTTGGAGACTGTACAAATCCATCAACTGTCTCTCATGAGCCAGCAATCATATTCAGCTGTGTTGATGACTCTGGAAACTGGGGACGTGGTGGAATGTTTGATGCTCTGTCAAAACTGTCTAATACTGTACCCACTGCTTATCACCGAGCATCCGAGTTTAAAGACCTTCATCTTGGAGACCTGCATCTCATAAAAATTGATGACAATGATGACCAACAAAACACACAAGCAAGCAAGCCTCTTTGGGTGGCAGTTGCAGTTACACAATCTTACAATTCGAGGCGTAAAGTCCCACGTAGTAGCATTTCAATTCCAGACCTTGAAAGTTGCTTAGCCAAAGCTTCATTCTCTGCTTCTCAGAAATCAGCCTCACTCCACATGCCACGTATTGGTTACCAAGACGGATCAGACCGATCTCAATGGTACACTGTTGAGCGTCTTCTTCGAAAATACTCCTCCATCTTCACCGTCAAAATATTCGTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003678 GO:0003824 GO:0004003 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0005886 GO:0006139 GO:0006259 GO:0006281 GO:0006289 GO:0006293 GO:0006294 GO:0006296 GO:0006325 GO:0006338 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0008026 GO:0008094 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022607 GO:0031334 GO:0031974 GO:0031981 GO:0032392 GO:0032508 GO:0033554 GO:0033683 GO:0034622 GO:0034641 GO:0036094 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043254 GO:0043933 GO:0044085 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051130 GO:0051276 GO:0051716 GO:0065003 GO:0065004 GO:0065007 GO:0070013 GO:0070035 GO:0070911 GO:0071103 GO:0071704 GO:0071824 GO:0071840 GO:0071944 GO:0090304 GO:0090305 GO:0097159 GO:0140097 GO:1901265 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Helicase_C SNF2_N

Protein Analysis

851

Amino Acids

95.88

Weight (kDa)

5.43

Isoelectric Point (pI)

45.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SNF2-rel_dom	PF00176	54 - 357	4.9e-64	SNF2-related domain
HDA2-3	PF11496	305 - 436	3.3e-06	Class II histone deacetylase complex subunits 2 and 3
Helicase_C	PF00271	378 - 501	1.5e-19	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004688)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G44980 AT2G44980 AT2G44980
fragaria_vesca	FvH4_7g09450 FvH4_7g09450 FvH4_7g09450 FvH4_7g09450 FvH4_7g09450 FvH4_7g09450 FvH4_7g09450 FvH4_7g09450 FvH4_7g09450
malus_domestica	MD07G1098400.v1.1
prunus_persica	Prupe.2G122400_v2.0.a1 Prupe.2G122400_v2.0.a1 Prupe.2G122400_v2.0.a1
pyrus_communis	pycom07g08110
rosa_chinensis	RchiOBHm_Chr1g0346091
rosa_laevigata	RLG00000028814
rosa_multiflora	Rmu_sc0003809.1_g000022 Rmu_ssc0000255.1_g000070
rosa_roxburghii	Rroxscaffold_4G00308820
rosa_rugosa	Rorug01G0178000 Rorug01G0178100 Rorug01G0178200
rosa_samantha	Rh1AG197500 Rh1BG162800 Rh1CG182500 Rh1DG193400
rosa_wichuraiana	Rw1G016330 Rw1G016580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1452
AatII	GACGTC	1 cut(s)	625
Acc36I	ACCTGC	1 cut(s)	2259
AccB1I	GGYRCC	1 cut(s)	806
AccB7I	CCANNNNNTGG	1 cut(s)	2459
AccBSI	CCGCTC	1 cut(s)	898
AccIII	TCCGGA	1 cut(s)	118
AciI	CCGC	7 cut(s)	20, 68, 71, 74, 729, 896, 1594
AclI	AACGTT	2 cut(s)	1267, 1716
AclWI	GGATC	7 cut(s)	510, 985, 1128, 1255, 1619, 2062, 2482
AcoI	YGGCCR	1 cut(s)	1150
AcsI	RAATTY	4 cut(s)	101, 131, 522, 1285
AcuI	CTGAAG	2 cut(s)	812, 1281
AcvI	CACGTG	1 cut(s)	1974
AcyI	GRCGYC	2 cut(s)	207, 622
AfaI	GTAC	5 cut(s)	826, 1254, 2083, 2199, 2495
AfiI	CCNNNNNNNGG	7 cut(s)	669, 936, 1093, 1408, 1666, 1831, 2459
AflII	CTTAAG	1 cut(s)	328
AhlI	ACTAGT	1 cut(s)	697
AjiI	CACGTC	1 cut(s)	2156
AjnI	CCWGG	4 cut(s)	301, 949, 1048, 1940
AjuI	GAANNNNNNNTTGG	4 cut(s)	16, 48, 2399, 2431
Alw21I	GWGCWC	2 cut(s)	1435, 1984
Alw26I	GTCTC	7 cut(s)	181, 629, 734, 1602, 2070, 2104, 2241
AlwI	GGATC	7 cut(s)	510, 985, 1128, 1255, 1619, 2062, 2482
AlwNI	CAGNNNCTG	1 cut(s)	2057
Ama87I	CYCGRG	2 cut(s)	86, 1628
Aor13HI	TCCGGA	1 cut(s)	118
AoxI	GGCC	2 cut(s)	305, 1150
ApeKI	GCWGC	6 cut(s)	862, 1274, 1364, 1531, 1853, 1937
ApoI	RAATTY	4 cut(s)	101, 131, 522, 1285
ArsI	GACNNNNNNTTYG	2 cut(s)	974, 1006
AseI	ATTAAT	1 cut(s)	1752
AspLEI	GCGC	1 cut(s)	1239
AspS9I	GGNCC	3 cut(s)	229, 305, 715
AsuHPI	GGTGA	6 cut(s)	9, 152, 1091, 1598, 2204, 2527
AsuII	TTCGAA	1 cut(s)	2515
AvaI	CYCGRG	2 cut(s)	86, 1628
AvaII	GGWCC	2 cut(s)	229, 715
BalI	TGGCCA	1 cut(s)	1152
BanI	GGYRCC	1 cut(s)	806
BanII	GRGCYC	2 cut(s)	676, 1435
BbrPI	CACGTG	1 cut(s)	1974
BbsI	GAAGAC	3 cut(s)	899, 960, 2501
Bbv12I	GWGCWC	2 cut(s)	1435, 1984
BbvCI	CCTCAGC	1 cut(s)	818
BbvI	GCAGC	6 cut(s)	849, 1261, 1351, 1543, 1840, 1924
BccI	CCATC	9 cut(s)	37, 229, 335, 1161, 1238, 1292, 1574, 2098, 2537
BceAI	ACGGC	3 cut(s)	71, 159, 399
BciT130I	CCWGG	4 cut(s)	303, 951, 1050, 1942
BclI	TGATCA	1 cut(s)	442
BcoDI	GTCTC	7 cut(s)	181, 629, 734, 1602, 2070, 2104, 2241
BcuI	ACTAGT	1 cut(s)	697
BfaI	CTAG	3 cut(s)	698, 1601, 1772
BfoI	RGCGCY	1 cut(s)	1240
BfrI	CTTAAG	1 cut(s)	328
BfuAI	ACCTGC	1 cut(s)	2259
BisI	GCNGC	8 cut(s)	69, 72, 863, 1275, 1365, 1532, 1854, 1938
BlpI	GCTNAGC	1 cut(s)	2401
BlsI	GCNGC	8 cut(s)	70, 73, 864, 1276, 1366, 1533, 1855, 1939
Bme1390I	CCNGG	4 cut(s)	303, 951, 1050, 1942
Bme18I	GGWCC	2 cut(s)	229, 715
BmeT110I	CYCGRG	2 cut(s)	86, 1628
BmgBI	CACGTC	1 cut(s)	2156
BmgT120I	GGNCC	3 cut(s)	229, 305, 715
BmiI	GGNNCC	4 cut(s)	808, 894, 1139, 1400
BmrFI	CCNGG	4 cut(s)	303, 951, 1050, 1942
BmrI	ACTGGG	2 cut(s)	753, 2158
BmsI	GCATC	5 cut(s)	669, 2038, 2161, 2228, 2263
BmuI	ACTGGG	2 cut(s)	753, 2158
BpiI	GAAGAC	3 cut(s)	899, 960, 2501
BpmI	CTGGAG	1 cut(s)	993
Bpu10I	CCTNAGC	1 cut(s)	818
Bpu1102I	GCTNAGC	1 cut(s)	2401
Bpu14I	TTCGAA	1 cut(s)	2515
BpuEI	CTTGAG	2 cut(s)	548, 620
BsaAI	YACGTR	3 cut(s)	1974, 2366, 2456
BsaHI	GRCGYC	2 cut(s)	207, 622
BsaI	GGTCTC	2 cut(s)	1602, 2241
BsaJI	CCNNGG	5 cut(s)	302, 527, 950, 1629, 2004
BsaWI	WCCGGW	1 cut(s)	118
Bsc4I	CCNNNNNNNGG	7 cut(s)	669, 936, 1093, 1408, 1666, 1831, 2459
Bse1I	ACTGG	6 cut(s)	640, 717, 718, 748, 1400, 2153
Bse3DI	GCAATG	1 cut(s)	1312
BseAI	TCCGGA	1 cut(s)	118
BseBI	CCWGG	4 cut(s)	303, 951, 1050, 1942
BseDI	CCNNGG	5 cut(s)	302, 527, 950, 1629, 2004
BseGI	GGATG	3 cut(s)	346, 1876, 2219
BseLI	CCNNNNNNNGG	7 cut(s)	669, 936, 1093, 1408, 1666, 1831, 2459
BseMI	GCAATG	1 cut(s)	1312
BseMII	CTCAG	7 cut(s)	263, 809, 1680, 1902, 1916, 2058, 2441
BseNI	ACTGG	6 cut(s)	640, 717, 718, 748, 1400, 2153
BseRI	GAGGAG	4 cut(s)	1154, 1525, 1646, 2515
BseXI	GCAGC	6 cut(s)	849, 1261, 1351, 1543, 1840, 1924
BsgI	GTGCAG	1 cut(s)	1839
BshFI	GGCC	2 cut(s)	307, 1152
BshNI	GGYRCC	1 cut(s)	806
BsiHKAI	GWGCWC	2 cut(s)	1435, 1984
BsiHKCI	CYCGRG	2 cut(s)	86, 1628
BsiSI	CCGG	1 cut(s)	119
BslFI	GGGAC	6 cut(s)	14, 309, 721, 761, 2166, 2345
BslI	CCNNNNNNNGG	7 cut(s)	669, 936, 1093, 1408, 1666, 1831, 2459
BsmAI	GTCTC	7 cut(s)	181, 629, 734, 1602, 2070, 2104, 2241
BsmBI	CGTCTC	1 cut(s)	629
BsmFI	GGGAC	6 cut(s)	14, 309, 721, 761, 2166, 2345
BsmI	GAATGC	1 cut(s)	731
BsnI	GGCC	2 cut(s)	307, 1152
Bso31I	GGTCTC	2 cut(s)	1602, 2241
BsoBI	CYCGRG	2 cut(s)	86, 1628
Bsp119I	TTCGAA	1 cut(s)	2515
Bsp1286I	GDGCHC	3 cut(s)	676, 1435, 1984
Bsp13I	TCCGGA	1 cut(s)	118
Bsp1407I	TGTACA	1 cut(s)	2081
Bsp1720I	GCTNAGC	1 cut(s)	2401
BspACI	CCGC	7 cut(s)	20, 68, 71, 74, 729, 896, 1594
BspANI	GGCC	2 cut(s)	307, 1152
BspCNI	CTCAG	7 cut(s)	264, 810, 1681, 1903, 1917, 2057, 2440
BspEI	TCCGGA	1 cut(s)	118
BspHI	TCATGA	2 cut(s)	1320, 2104
BspLI	GGNNCC	4 cut(s)	808, 894, 1139, 1400
BspMI	ACCTGC	1 cut(s)	2259
BspPI	GGATC	7 cut(s)	510, 985, 1128, 1255, 1619, 2062, 2482
BspT104I	TTCGAA	1 cut(s)	2515
BspT107I	GGYRCC	1 cut(s)	806
BspTI	CTTAAG	1 cut(s)	328
BspTNI	GGTCTC	2 cut(s)	1602, 2241
BsrBI	CCGCTC	1 cut(s)	898
BsrDI	GCAATG	1 cut(s)	1312
BsrGI	TGTACA	1 cut(s)	2081
BsrI	ACTGG	6 cut(s)	640, 717, 718, 748, 1400, 2153
BssECI	CCNNGG	5 cut(s)	302, 527, 950, 1629, 2004
BssNI	GRCGYC	2 cut(s)	207, 622
BssT1I	CCWWGG	1 cut(s)	527
Bst2UI	CCWGG	4 cut(s)	303, 951, 1050, 1942
Bst6I	CTCTTC	5 cut(s)	1068, 1491, 1560, 1641, 1950
BstACI	GRCGYC	2 cut(s)	207, 622
BstAFI	CTTAAG	1 cut(s)	328
BstAUI	TGTACA	1 cut(s)	2081
BstBAI	YACGTR	3 cut(s)	1974, 2366, 2456
BstBI	TTCGAA	1 cut(s)	2515
BstC8I	GCNNGC	5 cut(s)	299, 692, 2112, 2302, 2306
BstDSI	CCRYGG	1 cut(s)	2004
BstEII	GGTNACC	1 cut(s)	2462
BstENI	CCTNNNNNAGG	1 cut(s)	1091
BstF5I	GGATG	3 cut(s)	346, 1876, 2219
BstH2I	RGCGCY	1 cut(s)	1240
BstHHI	GCGC	1 cut(s)	1239
BstMAI	GTCTC	7 cut(s)	181, 629, 734, 1602, 2070, 2104, 2241
BstMWI	GCNNNNNNNGC	2 cut(s)	952, 1135
BstNI	CCWGG	4 cut(s)	303, 951, 1050, 1942
BstNSI	RCATGY	3 cut(s)	694, 1029, 2452
BstPI	GGTNACC	1 cut(s)	2462
BstSCI	CCNGG	4 cut(s)	301, 949, 1048, 1940
BstV1I	GCAGC	6 cut(s)	849, 1261, 1351, 1543, 1840, 1924
BstV2I	GAAGAC	3 cut(s)	899, 960, 2501
BstX2I	RGATCY	1 cut(s)	2054
BstXI	CCANNNNNNTGG	2 cut(s)	43, 1148
BstYI	RGATCY	1 cut(s)	2054
BsuRI	GGCC	2 cut(s)	307, 1152
BtgI	CCRYGG	1 cut(s)	2004
BtrI	CACGTC	1 cut(s)	2156
BtsCI	GGATG	3 cut(s)	346, 1876, 2219
BtsI	GCAGTG	1 cut(s)	2202
BtsIMutI	CAGTG	4 cut(s)	583, 710, 2202, 2496
BveI	ACCTGC	1 cut(s)	2259
Cac8I	GCNNGC	5 cut(s)	299, 692, 2112, 2302, 2306
CaiI	CAGNNNCTG	1 cut(s)	2057
CciI	TCATGA	2 cut(s)	1320, 2104
CfoI	GCGC	1 cut(s)	1239
Cfr13I	GGNCC	3 cut(s)	229, 305, 715
CseI	GACGC	2 cut(s)	196, 2495
Csp6I	GTAC	5 cut(s)	825, 1253, 2082, 2198, 2494
CviQI	GTAC	5 cut(s)	825, 1253, 2082, 2198, 2494
DraI	TTTAAA	1 cut(s)	2230
DrdI	GACNNNNNNGTC	1 cut(s)	1452
DseDI	GACNNNNNNGTC	1 cut(s)	1452
EaeI	YGGCCR	1 cut(s)	1150
Eam1104I	CTCTTC	5 cut(s)	1068, 1491, 1560, 1641, 1950
EarI	CTCTTC	5 cut(s)	1068, 1491, 1560, 1641, 1950
EciI	GGCGGA	1 cut(s)	89
Ecl136II	GAGCTC	1 cut(s)	1433
Eco130I	CCWWGG	1 cut(s)	527
Eco24I	GRGCYC	2 cut(s)	676, 1435
Eco31I	GGTCTC	2 cut(s)	1602, 2241
Eco47I	GGWCC	2 cut(s)	229, 715
Eco53kI	GAGCTC	1 cut(s)	1433
Eco57I	CTGAAG	2 cut(s)	812, 1281
Eco72I	CACGTG	1 cut(s)	1974
Eco88I	CYCGRG	2 cut(s)	86, 1628
Eco91I	GGTNACC	1 cut(s)	2462
EcoICRI	GAGCTC	1 cut(s)	1433
EcoNI	CCTNNNNNAGG	1 cut(s)	1091
EcoO65I	GGTNACC	1 cut(s)	2462
EcoRII	CCWGG	4 cut(s)	301, 949, 1048, 1940
EcoT14I	CCWWGG	1 cut(s)	527
EcoT22I	ATGCAT	1 cut(s)	684
EcoT38I	GRGCYC	2 cut(s)	676, 1435
ErhI	CCWWGG	1 cut(s)	527
Esp3I	CGTCTC	1 cut(s)	629
FalI	AAGNNNNNCTT	4 cut(s)	498, 530, 785, 817
FaqI	GGGAC	6 cut(s)	14, 309, 721, 761, 2166, 2345
FauNDI	CATATG	1 cut(s)	484
FbaI	TGATCA	1 cut(s)	442
Fnu4HI	GCNGC	8 cut(s)	69, 72, 863, 1275, 1365, 1532, 1854, 1938
FokI	GGATG	3 cut(s)	353, 1883, 2206
FriOI	GRGCYC	2 cut(s)	676, 1435
Fsp4HI	GCNGC	8 cut(s)	69, 72, 863, 1275, 1365, 1532, 1854, 1938
FspBI	CTAG	3 cut(s)	698, 1601, 1772
GlaI	GCGC	1 cut(s)	1238
GluI	GCNGC	8 cut(s)	69, 72, 863, 1275, 1365, 1532, 1854, 1938
GsuI	CTGGAG	1 cut(s)	993
HaeII	RGCGCY	1 cut(s)	1240
HaeIII	GGCC	2 cut(s)	307, 1152
HapII	CCGG	1 cut(s)	119
HgaI	GACGC	2 cut(s)	196, 2495
HhaI	GCGC	1 cut(s)	1239
Hin1I	GRCGYC	2 cut(s)	207, 622
Hin6I	GCGC	1 cut(s)	1237
HinP1I	GCGC	1 cut(s)	1237
HincII	GTYRAC	1 cut(s)	2062
HindII	GTYRAC	1 cut(s)	2062
HindIII	AAGCTT	4 cut(s)	1106, 1419, 1815, 2409
HpaI	GTTAAC	1 cut(s)	2062
HpaII	CCGG	1 cut(s)	119
HphI	GGTGA	6 cut(s)	9, 152, 1091, 1598, 2204, 2527
Hpy166II	GTNNAC	6 cut(s)	17, 369, 1082, 1613, 2062, 2496
Hpy8I	GTNNAC	6 cut(s)	17, 369, 1082, 1613, 2062, 2496
Hpy99I	CGWCG	2 cut(s)	43, 624
HpyAV	CCTTC	6 cut(s)	42, 85, 164, 1734, 1840, 2246
HpyCH4IV	ACGT	9 cut(s)	622, 989, 1267, 1708, 1716, 1973, 2155, 2365, 2455
HpyF10VI	GCNNNNNNNGC	2 cut(s)	952, 1135
HpySE526I	ACGT	9 cut(s)	622, 989, 1267, 1708, 1716, 1973, 2155, 2365, 2455
Hsp92I	GRCGYC	2 cut(s)	207, 622
HspAI	GCGC	1 cut(s)	1237
Kpn2I	TCCGGA	1 cut(s)	118
Ksp22I	TGATCA	1 cut(s)	442
KspAI	GTTAAC	1 cut(s)	2062
LmnI	GCTCC	4 cut(s)	877, 1143, 1213, 1979
Lsp1109I	GCAGC	6 cut(s)	849, 1261, 1351, 1543, 1840, 1924
LweI	GCATC	5 cut(s)	669, 2038, 2161, 2228, 2263
MaeI	CTAG	3 cut(s)	698, 1601, 1772
MaeII	ACGT	9 cut(s)	622, 989, 1267, 1708, 1716, 1973, 2155, 2365, 2455
MaeIII	GTNAC	5 cut(s)	139, 334, 1477, 2329, 2462
MbiI	CCGCTC	1 cut(s)	898
MfeI	CAATTG	1 cut(s)	1124
MflI	RGATCY	1 cut(s)	2054
MhlI	GDGCHC	3 cut(s)	676, 1435, 1984
MlsI	TGGCCA	1 cut(s)	1152
MluNI	TGGCCA	1 cut(s)	1152
MlyI	GAGTC	8 cut(s)	142, 244, 555, 796, 854, 1353, 1658, 2132
Mox20I	TGGCCA	1 cut(s)	1152
Mph1103I	ATGCAT	1 cut(s)	684
MroI	TCCGGA	1 cut(s)	118
MscI	TGGCCA	1 cut(s)	1152
MseI	TTAA	4 cut(s)	329, 1752, 2061, 2229
MslI	CAYNNNNRTG	2 cut(s)	41, 1146
Msp20I	TGGCCA	1 cut(s)	1152
MspA1I	CMGCKG	1 cut(s)	2127
MspCI	CTTAAG	1 cut(s)	328
MspI	CCGG	1 cut(s)	119
MspR9I	CCNGG	4 cut(s)	303, 951, 1050, 1942
MunI	CAATTG	1 cut(s)	1124
Mva1269I	GAATGC	1 cut(s)	731
MvaI	CCWGG	4 cut(s)	303, 951, 1050, 1942
MwoI	GCNNNNNNNGC	2 cut(s)	952, 1135
NdeI	CATATG	1 cut(s)	484
NlaIV	GGNNCC	4 cut(s)	808, 894, 1139, 1400
NmeAIII	GCCGAG	1 cut(s)	183
NmuCI	GTSAC	1 cut(s)	139
NsiI	ATGCAT	1 cut(s)	684
NspI	RCATGY	3 cut(s)	694, 1029, 2452
NspV	TTCGAA	1 cut(s)	2515
PaeI	GCATGC	1 cut(s)	694
PaeR7I	CTCGAG	1 cut(s)	86
PagI	TCATGA	2 cut(s)	1320, 2104
PcsI	WCGNNNNNNNCGW	1 cut(s)	1435
PctI	GAATGC	1 cut(s)	731
PfeI	GAWTC	5 cut(s)	568, 1354, 1636, 1799, 2036
PflMI	CCANNNNNTGG	1 cut(s)	2459
PkrI	GCNGC	8 cut(s)	70, 73, 864, 1276, 1366, 1533, 1855, 1939
PleI	GAGTC	8 cut(s)	142, 244, 555, 795, 853, 1352, 1657, 2132
PmaCI	CACGTG	1 cut(s)	1974
PmlI	CACGTG	1 cut(s)	1974
PpsI	GAGTC	8 cut(s)	142, 244, 555, 795, 853, 1352, 1657, 2132
Ppu21I	YACGTR	3 cut(s)	1974, 2366, 2456
PshBI	ATTAAT	1 cut(s)	1752
Psp124BI	GAGCTC	1 cut(s)	1435
Psp1406I	AACGTT	2 cut(s)	1267, 1716
Psp6I	CCWGG	4 cut(s)	301, 949, 1048, 1940
PspCI	CACGTG	1 cut(s)	1974
PspEI	GGTNACC	1 cut(s)	2462
PspGI	CCWGG	4 cut(s)	301, 949, 1048, 1940
PspN4I	GGNNCC	4 cut(s)	808, 894, 1139, 1400
PspPI	GGNCC	3 cut(s)	229, 305, 715
PstNI	CAGNNNCTG	1 cut(s)	2057
PsuI	RGATCY	1 cut(s)	2054
PvuII	CAGCTG	1 cut(s)	2127
RsaI	GTAC	5 cut(s)	826, 1254, 2083, 2199, 2495
RsaNI	GTAC	5 cut(s)	825, 1253, 2082, 2198, 2494
RseI	CAYNNNNRTG	2 cut(s)	41, 1146
SacI	GAGCTC	1 cut(s)	1435
SaqAI	TTAA	4 cut(s)	329, 1752, 2061, 2229
SatI	GCNGC	8 cut(s)	69, 72, 863, 1275, 1365, 1532, 1854, 1938
Sau96I	GGNCC	3 cut(s)	229, 305, 715
SchI	GAGTC	8 cut(s)	142, 244, 555, 796, 854, 1353, 1658, 2132
ScrFI	CCNGG	4 cut(s)	303, 951, 1050, 1942
SduI	GDGCHC	3 cut(s)	676, 1435, 1984
SfaNI	GCATC	5 cut(s)	669, 2038, 2161, 2228, 2263
Sfr274I	CTCGAG	1 cut(s)	86
SfuI	TTCGAA	1 cut(s)	2515
SinI	GGWCC	2 cut(s)	229, 715
SlaI	CTCGAG	1 cut(s)	86
SmiMI	CAYNNNNRTG	2 cut(s)	41, 1146
SmlI	CTYRAG	4 cut(s)	86, 328, 563, 599
SmoI	CTYRAG	4 cut(s)	86, 328, 563, 599
SpeI	ACTAGT	1 cut(s)	697
SphI	GCATGC	1 cut(s)	694
SsiI	CCGC	7 cut(s)	20, 68, 71, 74, 729, 896, 1594
SspI	AATATT	2 cut(s)	1003, 2547
SspMI	CTAG	3 cut(s)	698, 1601, 1772
SstI	GAGCTC	1 cut(s)	1435
StyD4I	CCNGG	4 cut(s)	301, 949, 1048, 1940
StyI	CCWWGG	1 cut(s)	527
TaiI	ACGT	9 cut(s)	625, 992, 1270, 1711, 1719, 1976, 2158, 2368, 2458
TaqI	TCGA	8 cut(s)	87, 168, 222, 1056, 1438, 1757, 2348, 2515
TaqII	GACCGA	1 cut(s)	2496
TatI	WGTACW	1 cut(s)	2081
TauI	GCSGC	2 cut(s)	71, 74
TfiI	GAWTC	5 cut(s)	568, 1354, 1636, 1799, 2036
Tru1I	TTAA	4 cut(s)	329, 1752, 2061, 2229
Tru9I	TTAA	4 cut(s)	329, 1752, 2061, 2229
TscAI	CASTG	4 cut(s)	583, 717, 2209, 2503
TseFI	GTSAC	1 cut(s)	139
TseI	GCWGC	6 cut(s)	862, 1274, 1364, 1531, 1853, 1937
Tsp45I	GTSAC	1 cut(s)	139
TspGWI	ACGGA	4 cut(s)	353, 890, 1993, 2487
TspRI	CASTG	4 cut(s)	583, 717, 2209, 2503
Van91I	CCANNNNNTGG	1 cut(s)	2459
Vha464I	CTTAAG	1 cut(s)	328
VpaK11BI	GGWCC	2 cut(s)	229, 715
VspI	ATTAAT	1 cut(s)	1752
XagI	CCTNNNNNAGG	1 cut(s)	1091
XapI	RAATTY	4 cut(s)	101, 131, 522, 1285
XceI	RCATGY	3 cut(s)	694, 1029, 2452
XhoI	CTCGAG	1 cut(s)	86
XspI	CTAG	3 cut(s)	698, 1601, 1772
ZraI	GACGTC	1 cut(s)	623
Zsp2I	ATGCAT	1 cut(s)	684

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.