Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0004688

Physical Location & Seq

Genomic Coordinates Forward (+)

17915426 .. 17922406

Gene Structure 6981 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G122400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2634 bp

ATGAATTACGAGCAGAGGCTCAAAGCCGCAGCGAAAATCATACTCGCCGACGACGCACGCGCCGGCGACGAGCGTGTTAGCGCTGAAGAACTCGGCGTTACGGCTTCATTAAAGCCTCACCAAGTCGAAGGTGTCTCGTGGCTCATACGCCGATACAATCTTGGCGTCAACGTCATTCTTGGAGACGAGATGGGACTGGGCAAGACTTTGCAAGCTGTCTCTTTATTGAGCTATTTGAAGGTTCACAAGTTGTCACCTGGGCCATTTTTGGTATTGTGTCCTCTAAGTGTAACAGATGGTTGGGTCTCTGAGATGGAGAAATTTGCACCAAAACTAAAAGTTCTTCGGTACGTTGGTGATAAAGAATATAGGCGCATTCTTCGCAGGACAATCTACGAGCATGGAAAAGAAGAGTCCTCCTCTTCATCTGATGTATTGTCGTTGCCTTTTGATGTCCTATTGACAACATATGACATGGTGTTGGCAGATCAGGATTTTCTTTCTCAGATACCATGGAGTTATGCAGTAATTGATGAAGCTCAGAGGCTTAAAAACCCTAATAGTGTTCTGTACAATGTCCTAAGAGAGCGCTATCTTATACCAAGACGGTTACTGATGACTGGCACACCCATTCAAAACAATATCACTGAACTTTGGGCTTTGATGCATTTTTGTATGCCATCAGTCTATGGGAAACTGGATGAGTTCCTTGCAACATTTAAGGAAGCTGGAGATCCTTCATCAGGCCATGATACAGCTAAAGTTAAGGAGCAACTTAAAAGCTTAAGATGCATATTGGGAGCTTTCATGATCCGGCGTACAAAATCTAAACTTATTGAGAGTGGAGATCTATTGCTGCCACCGCTTACTGAGATAACAGTGCTGGCACCATTGGTCGGATTGCAAAAGAAGGTGTACATGTCAATACTGAGGAAGGAGCTTCCTAAACTACTTGCTGTCTCTTCTGGAGGTCCAAATCATCAATCCTTACAGAATATTGTGATACAGTTACGAAAAGCATGTAGCCATCCTTATCTCTTCCCGGGTATTGAGCCCGAACCATATGAAGAGGGTGAACACCTTGTTCAGGCTAGTGGTAAACTTATGATTTTGGACCAACTACTTCAAAAGCTGCATGGGTATGGACACCGTGTGCTTCTCTTTGCACAGATGACGCATACCCTTGACATTCTCCAGGATTTTCTAGAGTTAAGGAAATATTCCTATGAACGCCTTGATGGATCAATTCGGGCTGAGGAGCGGTTTGCTGCCATAAGAAGTTTCAGCACACAATCAACCAAAAAAAGTTTGAAGTCTCAACCTGATCAAAATGGTGCTTTTGTCTTCATGATCTCTACAAGAGCTGGTGGAGTTGGCTTGAATCTTGTGGCTGCTGATACTGTTATATTCTACGAGCAAGATTGGAATCCCCAGGTTGACAAACAAGCTCTTCAGCGGGCTCACAGGATTGGTCAAATGAATGATGTACTGTCAATAAACCTAGTTACAGGATGTACGGTGGAGGAGGTTATCATGCGGAGAGCGGAGAGGAAGTTGCGGCTTAGCCATAATGTTATTGGAGATGATGTTATGGACCAGGAAGGTAAAGAAGAAGCAGGAGTTGAACCTAGTGACTTGCGATCCATCATATTTGGGTTACATCTCTTCGATCCTGATGAAATCAACAATGATGAGTTTGGGATGTCAGAACTGAATGCTATGGCTGAGAAGGTAATCTCAGTGCGCGATAAACAGATAGCAAATGAGGATGAGAGGAAATTTGAGGTCAATCCAACAGATGTTTTGCATGGACATGATCTTGTTGCAGGAGAAAGTAACACTTCTCTTAGTTTCAATTCTAGTTTTGATGAAGCTTCATATCTCTCTTGGGTTGAAAAATTCAAGGAGGTATCACAAGAAAGTGGAAATGAAAATATGGATTTGAGAAGCAGAAGAAACTTTCTCGAGGAAAAGCGTCTAAAACGTGAGGCTGCAAAGAAGAAGGCAGAGGAGGAGAAGTTATCTAAGTGGGAAGACCTTGGGTACCATTCATTGTCTGTCGAGGACCCTGTCAGCCCTGTGGATAGTGACATGATGTCTGATTCAGGTTCTGTCCAGTTTGTTTATGGGGACTGTACACAACCATCAAAAGTTTGTCCATCTGAACCTACCATTATTTTCAGCTGTGTTGATGATTCTGGACACTGGGGTCATGGAGGAATGTTTGATGCACTGGCCAAGCTATCTTCAAGTATCCCCGATGCATATCTGCAAGCTTCAGAATTTGATGACCTGCATCTTGGTGATCTTCACCTTATAAGAGTTAATGAGGATGCGAATGAACAGAAGATGGACTGTAATCTCCCTCAATGGGTGGCTTTGGCTGTTGTACAATCTTATAATCCCAGGCGTAAAGTACCCCGAAGCAAGATTTCTATTCCTGACTTAGAAAGATGCTTATCGAAGGCATCATTTTCAGCTGCTCAGAATTCTGCTTCAATCCACATGCCACGCATTGGGTATCAAGATGGATCAGATCGTGCAGAATGGTACACAGTCGAACGTCTTCTACGAAAATATGCTTCTCTGTACAGCATAAAGATATATGTGTATTATTATAAGCGGTCTGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003678 GO:0003824 GO:0004003 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0005886 GO:0006139 GO:0006259 GO:0006281 GO:0006289 GO:0006293 GO:0006294 GO:0006296 GO:0006325 GO:0006338 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0008026 GO:0008094 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022607 GO:0031334 GO:0031974 GO:0031981 GO:0032392 GO:0032508 GO:0033554 GO:0033683 GO:0034622 GO:0034641 GO:0036094 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043254 GO:0043933 GO:0044085 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051130 GO:0051276 GO:0051716 GO:0065003 GO:0065004 GO:0065007 GO:0070013 GO:0070035 GO:0070911 GO:0071103 GO:0071704 GO:0071824 GO:0071840 GO:0071944 GO:0090304 GO:0090305 GO:0097159 GO:0140097 GO:1901265 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Helicase_C SNF2_N

Protein Analysis

878

Amino Acids

99.05

Weight (kDa)

5.8

Isoelectric Point (pI)

47.35

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004688)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G44980 AT2G44980 AT2G44980
fragaria_vesca	FvH4_7g09450 FvH4_7g09450 FvH4_7g09450 FvH4_7g09450 FvH4_7g09450 FvH4_7g09450 FvH4_7g09450 FvH4_7g09450 FvH4_7g09450
malus_domestica	MD07G1098400.v1.1
prunus_persica	Prupe.2G122400_v2.0.a1 Prupe.2G122400_v2.0.a1 Prupe.2G122400_v2.0.a1
pyrus_communis	pycom07g08110
rosa_chinensis	RchiOBHm_Chr1g0346091
rosa_laevigata	RLG00000028814
rosa_multiflora	Rmu_sc0003809.1_g000022 Rmu_ssc0000255.1_g000070
rosa_roxburghii	Rroxscaffold_4G00308820
rosa_rugosa	Rorug01G0178000 Rorug01G0178100 Rorug01G0178200
rosa_samantha	Rh1AG197500 Rh1BG162800 Rh1CG182500 Rh1DG193400
rosa_wichuraiana	Rw1G016330 Rw1G016580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	2318, 2400, 2619
AasI	GACNNNNNNGTC	1 cut(s)	2208
Acc36I	ACCTGC	1 cut(s)	2301
Acc65I	GGTACC	1 cut(s)	2043
AccB1I	GGYRCC	2 cut(s)	886, 2043
AccB7I	CCANNNNNTGG	1 cut(s)	2516
AccBSI	CCGCTC	2 cut(s)	1261, 1544
AccII	CGCG	2 cut(s)	60, 1746
AciI	CCGC	8 cut(s)	27, 863, 1261, 1456, 1537, 1544, 1558, 2623
AclWI	GGATC	6 cut(s)	728, 805, 1249, 1635, 1664, 2539
AcoI	YGGCCR	1 cut(s)	2235
AcsI	RAATTY	5 cut(s)	320, 1778, 1898, 2282, 2488
AcuI	CTGAAG	3 cut(s)	105, 1436, 2262
AcyI	GRCGYC	1 cut(s)	165
AdeI	CACNNNGTG	1 cut(s)	1153
AfeI	AGCGCT	2 cut(s)	82, 590
AfiI	CCNNNNNNNGG	5 cut(s)	743, 896, 1087, 2371, 2516
AflII	CTTAAG	1 cut(s)	784
AflIII	ACRYGT	1 cut(s)	918
AhdI	GACNNNNNGTC	1 cut(s)	2095
AjnI	CCWGG	5 cut(s)	256, 1194, 1431, 1596, 2405
Alw26I	GTCTC	6 cut(s)	139, 177, 223, 310, 964, 1320
AlwI	GGATC	6 cut(s)	728, 805, 1249, 1635, 1664, 2539
AlwNI	CAGNNNCTG	1 cut(s)	2111
Ama87I	CYCGRG	2 cut(s)	1042, 1964
Aor51HI	AGCGCT	2 cut(s)	82, 590
AoxI	GGCC	3 cut(s)	260, 745, 2235
ApeKI	GCWGC	7 cut(s)	29, 856, 1132, 1268, 1391, 1991, 2480
ApoI	RAATTY	5 cut(s)	320, 1778, 1898, 2282, 2488
Asp700I	GAANNNNTTC	1 cut(s)	2565
Asp718I	GGTACC	1 cut(s)	2043
AspLEI	GCGC	5 cut(s)	62, 83, 375, 591, 1746
AspS9I	GGNCC	5 cut(s)	260, 971, 1114, 1594, 2065
AsuC2I	CCSGG	2 cut(s)	1043, 1044
AsuHPI	GGTGA	6 cut(s)	110, 246, 368, 1085, 2303, 2315
AvaI	CYCGRG	2 cut(s)	1042, 1964
AvaII	GGWCC	4 cut(s)	971, 1114, 1594, 2065
BaeI	ACNNNNGTAYC	2 cut(s)	340, 373
BalI	TGGCCA	1 cut(s)	2237
BanI	GGYRCC	2 cut(s)	886, 2043
BanII	GRGCYC	2 cut(s)	1056, 1462
BauI	CACGAG	1 cut(s)	136
BbsI	GAAGAC	3 cut(s)	1336, 2040, 2558
BbvCI	CCTCAGC	1 cut(s)	1254
BbvI	GCAGC	7 cut(s)	41, 843, 1119, 1255, 1378, 1978, 2467
BceAI	ACGGC	1 cut(s)	117
BciT130I	CCWGG	5 cut(s)	258, 1196, 1433, 1598, 2407
BciVI	GTATCC	1 cut(s)	2264
BclI	TGATCA	1 cut(s)	1324
BcnI	CCSGG	2 cut(s)	1043, 1044
BcoDI	GTCTC	6 cut(s)	139, 177, 223, 310, 964, 1320
BfaI	CTAG	5 cut(s)	1092, 1205, 1502, 1629, 1860
BfoI	RGCGCY	2 cut(s)	84, 592
BfrI	CTTAAG	1 cut(s)	784
BfuAI	ACCTGC	1 cut(s)	2301
BfuI	GTATCC	1 cut(s)	2264
BglII	AGATCT	1 cut(s)	847
BisI	GCNGC	9 cut(s)	27, 30, 857, 1133, 1269, 1392, 1559, 1992, 2481
BlpI	GCTNAGC	1 cut(s)	1562
BlsI	GCNGC	9 cut(s)	28, 31, 858, 1134, 1270, 1393, 1560, 1993, 2482
Bme1390I	CCNGG	7 cut(s)	258, 1043, 1044, 1196, 1433, 1598, 2407
Bme18I	GGWCC	4 cut(s)	971, 1114, 1594, 2065
BmeRI	GACNNNNNGTC	1 cut(s)	2095
BmeT110I	CYCGRG	2 cut(s)	1042, 1964
BmgT120I	GGNCC	5 cut(s)	260, 971, 1114, 1594, 2065
BmiI	GGNNCC	3 cut(s)	888, 2045, 2067
BmrFI	CCNGG	7 cut(s)	258, 1043, 1044, 1196, 1433, 1598, 2407
BmrI	ACTGGG	2 cut(s)	206, 2215
BmsI	GCATC	8 cut(s)	654, 779, 2218, 2251, 2305, 2323, 2444, 2477
BmuI	ACTGGG	2 cut(s)	206, 2215
BpiI	GAAGAC	3 cut(s)	1336, 2040, 2558
BplI	GAGNNNNNCTC	2 cut(s)	404, 436
BpmI	CTGGAG	3 cut(s)	750, 987, 1178
Bpu10I	CCTNAGC	1 cut(s)	1254
Bpu1102I	GCTNAGC	1 cut(s)	1562
BpuMI	CCSGG	2 cut(s)	1043, 1044
BsaBI	GATNNNNATC	3 cut(s)	1425, 2265, 2458
BsaHI	GRCGYC	1 cut(s)	165
BsaI	GGTCTC	1 cut(s)	310
BsaJI	CCNNGG	6 cut(s)	257, 512, 1042, 1431, 2038, 2405
BsaXI	ACNNNNNCTCC	6 cut(s)	1538, 1568, 1572, 1602, 2003, 2033
Bsc4I	CCNNNNNNNGG	5 cut(s)	743, 896, 1087, 2371, 2516
Bse118I	RCCGGY	1 cut(s)	62
Bse1I	ACTGG	6 cut(s)	201, 625, 702, 2116, 2210, 2238
Bse8I	GATNNNNATC	3 cut(s)	1425, 2265, 2458
BseBI	CCWGG	5 cut(s)	258, 1196, 1433, 1598, 2407
BseDI	CCNNGG	6 cut(s)	257, 512, 1042, 1431, 2038, 2405
BseGI	GGATG	6 cut(s)	706, 1027, 1517, 1707, 1774, 2338
BseJI	GATNNNNATC	3 cut(s)	1425, 2265, 2458
BseLI	CCNNNNNNNGG	5 cut(s)	743, 896, 1087, 2371, 2516
BseMII	CTCAG	9 cut(s)	300, 518, 554, 861, 920, 1245, 1716, 1752, 2498
BseNI	ACTGG	6 cut(s)	201, 625, 702, 2116, 2210, 2238
BseRI	GAGGAG	5 cut(s)	409, 1271, 1538, 2024, 2027
BseXI	GCAGC	7 cut(s)	41, 843, 1119, 1255, 1378, 1978, 2467
BsgI	GTGCAG	1 cut(s)	2562
Bsh1236I	CGCG	2 cut(s)	60, 1746
BshFI	GGCC	3 cut(s)	262, 747, 2237
BshNI	GGYRCC	2 cut(s)	886, 2043
BsiHKCI	CYCGRG	2 cut(s)	1042, 1964
BsiSI	CCGG	3 cut(s)	63, 814, 1043
BslFI	GGGAC	2 cut(s)	207, 2144
BslI	CCNNNNNNNGG	5 cut(s)	743, 896, 1087, 2371, 2516
BsmAI	GTCTC	6 cut(s)	139, 177, 223, 310, 964, 1320
BsmBI	CGTCTC	1 cut(s)	177
BsmFI	GGGAC	2 cut(s)	207, 2144
BsmI	GAATGC	2 cut(s)	375, 1720
BsnI	GGCC	3 cut(s)	262, 747, 2237
Bso31I	GGTCTC	1 cut(s)	310
BsoBI	CYCGRG	2 cut(s)	1042, 1964
Bsp1286I	GDGCHC	2 cut(s)	1056, 1462
Bsp1407I	TGTACA	5 cut(s)	570, 915, 2135, 2389, 2589
Bsp1720I	GCTNAGC	1 cut(s)	1562
Bsp19I	CCATGG	1 cut(s)	512
BspACI	CCGC	8 cut(s)	27, 863, 1261, 1456, 1537, 1544, 1558, 2623
BspANI	GGCC	3 cut(s)	262, 747, 2237
BspCNI	CTCAG	9 cut(s)	301, 517, 553, 862, 921, 1246, 1717, 1751, 2497
BspFNI	CGCG	2 cut(s)	60, 1746
BspHI	TCATGA	2 cut(s)	807, 1347
BspLI	GGNNCC	3 cut(s)	888, 2045, 2067
BspMI	ACCTGC	1 cut(s)	2301
BspPI	GGATC	6 cut(s)	728, 805, 1249, 1635, 1664, 2539
BspQI	GCTCTTC	1 cut(s)	1455
BspT107I	GGYRCC	2 cut(s)	886, 2043
BspTI	CTTAAG	1 cut(s)	784
BspTNI	GGTCTC	1 cut(s)	310
BsrBI	CCGCTC	2 cut(s)	1261, 1544
BsrFI	RCCGGY	1 cut(s)	62
BsrGI	TGTACA	5 cut(s)	570, 915, 2135, 2389, 2589
BsrI	ACTGG	6 cut(s)	201, 625, 702, 2116, 2210, 2238
BssAI	RCCGGY	1 cut(s)	62
BssECI	CCNNGG	6 cut(s)	257, 512, 1042, 1431, 2038, 2405
BssNI	GRCGYC	1 cut(s)	165
BssSI	CACGAG	1 cut(s)	136
BssT1I	CCWWGG	2 cut(s)	512, 2038
Bst2BI	CACGAG	1 cut(s)	136
Bst2UI	CCWGG	5 cut(s)	258, 1196, 1433, 1598, 2407
Bst6I	CTCTTC	7 cut(s)	405, 427, 967, 1043, 1062, 1455, 1670
BstACI	GRCGYC	1 cut(s)	165
BstAFI	CTTAAG	1 cut(s)	784
BstAUI	TGTACA	5 cut(s)	570, 915, 2135, 2389, 2589
BstC8I	GCNNGC	6 cut(s)	58, 64, 213, 885, 1458, 2274
BstDSI	CCRYGG	1 cut(s)	512
BstENI	CCTNNNNNAGG	2 cut(s)	741, 1085
BstF5I	GGATG	6 cut(s)	706, 1027, 1517, 1707, 1774, 2338
BstFNI	CGCG	2 cut(s)	60, 1746
BstH2I	RGCGCY	2 cut(s)	84, 592
BstHHI	GCGC	5 cut(s)	62, 83, 375, 591, 1746
BstMAI	GTCTC	6 cut(s)	139, 177, 223, 310, 964, 1320
BstMWI	GCNNNNNNNGC	4 cut(s)	53, 381, 789, 862
BstNI	CCWGG	5 cut(s)	258, 1196, 1433, 1598, 2407
BstNSI	RCATGY	3 cut(s)	922, 1023, 2509
BstSCI	CCNGG	7 cut(s)	256, 1041, 1042, 1194, 1431, 1596, 2405
BstUI	CGCG	2 cut(s)	60, 1746
BstV1I	GCAGC	7 cut(s)	41, 843, 1119, 1255, 1378, 1978, 2467
BstV2I	GAAGAC	3 cut(s)	1336, 2040, 2558
BstX2I	RGATCY	2 cut(s)	733, 847
BstYI	RGATCY	2 cut(s)	733, 847
BsuI	GTATCC	1 cut(s)	2264
BsuRI	GGCC	3 cut(s)	262, 747, 2237
BtgI	CCRYGG	1 cut(s)	512
BtsCI	GGATG	6 cut(s)	706, 1027, 1517, 1707, 1774, 2338
BtsIMutI	CAGTG	5 cut(s)	645, 885, 1746, 2203, 2231
BveI	ACCTGC	1 cut(s)	2301
Cac8I	GCNNGC	6 cut(s)	58, 64, 213, 885, 1458, 2274
CaiI	CAGNNNCTG	1 cut(s)	2111
CciI	TCATGA	2 cut(s)	807, 1347
CfoI	GCGC	5 cut(s)	62, 83, 375, 591, 1746
Cfr10I	RCCGGY	1 cut(s)	62
Cfr13I	GGNCC	5 cut(s)	260, 971, 1114, 1594, 2065
Cfr9I	CCCGGG	1 cut(s)	1042
CseI	GACGC	4 cut(s)	62, 154, 1183, 1964
DraIII	CACNNNGTG	1 cut(s)	1153
DrdI	GACNNNNNNGTC	1 cut(s)	2208
DriI	GACNNNNNGTC	1 cut(s)	2095
DseDI	GACNNNNNNGTC	1 cut(s)	2208
EaeI	YGGCCR	1 cut(s)	2235
Eam1104I	CTCTTC	7 cut(s)	405, 427, 967, 1043, 1062, 1455, 1670
Eam1105I	GACNNNNNGTC	1 cut(s)	2095
EarI	CTCTTC	7 cut(s)	405, 427, 967, 1043, 1062, 1455, 1670
Eco130I	CCWWGG	2 cut(s)	512, 2038
Eco24I	GRGCYC	2 cut(s)	1056, 1462
Eco31I	GGTCTC	1 cut(s)	310
Eco47I	GGWCC	4 cut(s)	971, 1114, 1594, 2065
Eco47III	AGCGCT	2 cut(s)	82, 590
Eco57I	CTGAAG	3 cut(s)	105, 1436, 2262
Eco88I	CYCGRG	2 cut(s)	1042, 1964
EcoNI	CCTNNNNNAGG	2 cut(s)	741, 1085
EcoO109I	RGGNCCY	1 cut(s)	2065
EcoRI	GAATTC	1 cut(s)	2488
EcoRII	CCWGG	5 cut(s)	256, 1194, 1431, 1596, 2405
EcoT14I	CCWWGG	2 cut(s)	512, 2038
EcoT22I	ATGCAT	3 cut(s)	669, 794, 2266
EcoT38I	GRGCYC	2 cut(s)	1056, 1462
ErhI	CCWWGG	2 cut(s)	512, 2038
Esp3I	CGTCTC	1 cut(s)	177
FalI	AAGNNNNNCTT	2 cut(s)	1825, 1857
FaqI	GGGAC	2 cut(s)	207, 2144
FauI	CCCGC	1 cut(s)	1449
FauNDI	CATATG	2 cut(s)	469, 1063
FbaI	TGATCA	1 cut(s)	1324
Fnu4HI	GCNGC	9 cut(s)	27, 30, 857, 1133, 1269, 1392, 1559, 1992, 2481
FokI	GGATG	6 cut(s)	713, 1014, 1524, 1714, 1781, 2345
FriOI	GRGCYC	2 cut(s)	1056, 1462
Fsp4HI	GCNGC	9 cut(s)	27, 30, 857, 1133, 1269, 1392, 1559, 1992, 2481
FspBI	CTAG	5 cut(s)	1092, 1205, 1502, 1629, 1860
GlaI	GCGC	5 cut(s)	61, 82, 374, 590, 1745
GluI	GCNGC	9 cut(s)	27, 30, 857, 1133, 1269, 1392, 1559, 1992, 2481
GsuI	CTGGAG	3 cut(s)	750, 987, 1178
HaeII	RGCGCY	2 cut(s)	84, 592
HaeIII	GGCC	3 cut(s)	262, 747, 2237
HapII	CCGG	3 cut(s)	63, 814, 1043
HgaI	GACGC	4 cut(s)	62, 154, 1183, 1964
HhaI	GCGC	5 cut(s)	62, 83, 375, 591, 1746
Hin1I	GRCGYC	1 cut(s)	165
Hin6I	GCGC	5 cut(s)	60, 81, 373, 589, 1744
HinP1I	GCGC	5 cut(s)	60, 81, 373, 589, 1744
HincII	GTYRAC	2 cut(s)	169, 1438
HindII	GTYRAC	2 cut(s)	169, 1438
HindIII	AAGCTT	3 cut(s)	781, 1872, 2274
HinfI	GANTC	5 cut(s)	413, 1381, 1426, 2102, 2195
HpaII	CCGG	3 cut(s)	63, 814, 1043
HphI	GGTGA	6 cut(s)	110, 246, 368, 1085, 2303, 2315
Hpy166II	GTNNAC	8 cut(s)	169, 244, 916, 1076, 1100, 1438, 2138, 2553
Hpy8I	GTNNAC	8 cut(s)	169, 244, 916, 1076, 1100, 1438, 2138, 2553
Hpy99I	CGWCG	3 cut(s)	53, 56, 71
HpyAV	CCTTC	9 cut(s)	122, 232, 747, 904, 928, 1595, 1723, 1996, 2458
HpyCH4IV	ACGT	4 cut(s)	171, 351, 1984, 2563
HpyF10VI	GCNNNNNNNGC	4 cut(s)	53, 381, 789, 862
HpySE526I	ACGT	4 cut(s)	171, 351, 1984, 2563
Hsp92I	GRCGYC	1 cut(s)	165
HspAI	GCGC	5 cut(s)	60, 81, 373, 589, 1744
KpnI	GGTACC	1 cut(s)	2047
KroI	GCCGGC	1 cut(s)	62
KroNI	GCCGGC	1 cut(s)	64
Ksp22I	TGATCA	1 cut(s)	1324
LguI	GCTCTTC	1 cut(s)	1455
LmnI	GCTCC	4 cut(s)	769, 800, 937, 1258
Lsp1109I	GCAGC	7 cut(s)	41, 843, 1119, 1255, 1378, 1978, 2467
LweI	GCATC	8 cut(s)	654, 779, 2218, 2251, 2305, 2323, 2444, 2477
MaeI	CTAG	5 cut(s)	1092, 1205, 1502, 1629, 1860
MaeII	ACGT	4 cut(s)	171, 351, 1984, 2563
MbiI	CCGCTC	2 cut(s)	1261, 1544
MflI	RGATCY	2 cut(s)	733, 847
MhlI	GDGCHC	2 cut(s)	1056, 1462
MlsI	TGGCCA	1 cut(s)	2237
MluCI	AATT	9 cut(s)	4, 320, 528, 1245, 1778, 1855, 1898, 2282, 2488
MluNI	TGGCCA	1 cut(s)	2237
MlyI	GAGTC	1 cut(s)	422
MmeI	TCCRAC	2 cut(s)	877, 1817
Mox20I	TGGCCA	1 cut(s)	2237
Mph1103I	ATGCAT	3 cut(s)	669, 794, 2266
MreI	CGCCGGCG	1 cut(s)	62
MroNI	GCCGGC	1 cut(s)	62
MroXI	GAANNNNTTC	1 cut(s)	2565
MscI	TGGCCA	1 cut(s)	2237
MseI	TTAA	8 cut(s)	110, 549, 720, 765, 777, 785, 1211, 2325
MslI	CAYNNNNRTG	3 cut(s)	1140, 1812, 2301
Msp20I	TGGCCA	1 cut(s)	2237
MspA1I	CMGCKG	3 cut(s)	1456, 2184, 2480
MspCI	CTTAAG	1 cut(s)	784
MspI	CCGG	3 cut(s)	63, 814, 1043
MspR9I	CCNGG	7 cut(s)	258, 1043, 1044, 1196, 1433, 1598, 2407
Mva1269I	GAATGC	2 cut(s)	375, 1720
MvaI	CCWGG	5 cut(s)	258, 1196, 1433, 1598, 2407
MvnI	CGCG	2 cut(s)	60, 1746
MwoI	GCNNNNNNNGC	4 cut(s)	53, 381, 789, 862
NaeI	GCCGGC	1 cut(s)	64
NciI	CCSGG	2 cut(s)	1043, 1044
NcoI	CCATGG	1 cut(s)	512
NdeI	CATATG	2 cut(s)	469, 1063
NgoMIV	GCCGGC	1 cut(s)	62
NlaIV	GGNNCC	3 cut(s)	888, 2045, 2067
NmeAIII	GCCGAG	1 cut(s)	72
NmuCI	GTSAC	3 cut(s)	252, 1631, 2087
NsiI	ATGCAT	3 cut(s)	669, 794, 2266
NspI	RCATGY	3 cut(s)	922, 1023, 2509
PaeR7I	CTCGAG	1 cut(s)	1964
PagI	TCATGA	2 cut(s)	807, 1347
PciI	ACATGT	1 cut(s)	918
PciSI	GCTCTTC	1 cut(s)	1455
PcsI	WCGNNNNNNNCGW	1 cut(s)	2569
PctI	GAATGC	2 cut(s)	375, 1720
PdiI	GCCGGC	1 cut(s)	64
PdmI	GAANNNNTTC	1 cut(s)	2565
PfeI	GAWTC	4 cut(s)	1381, 1426, 2102, 2195
PflFI	GACNNNGTC	1 cut(s)	2069
PflMI	CCANNNNNTGG	1 cut(s)	2516
PfoI	TCCNGGA	1 cut(s)	1194
PkrI	GCNGC	9 cut(s)	28, 31, 858, 1134, 1270, 1393, 1560, 1993, 2482
PleI	GAGTC	1 cut(s)	421
PpsI	GAGTC	1 cut(s)	421
PpuMI	RGGWCCY	1 cut(s)	2065
PscI	ACATGT	1 cut(s)	918
PsiI	TTATAA	3 cut(s)	2318, 2400, 2619
Psp5II	RGGWCCY	1 cut(s)	2065
Psp6I	CCWGG	5 cut(s)	256, 1194, 1431, 1596, 2405
PspGI	CCWGG	5 cut(s)	256, 1194, 1431, 1596, 2405
PspN4I	GGNNCC	3 cut(s)	888, 2045, 2067
PspPI	GGNCC	5 cut(s)	260, 971, 1114, 1594, 2065
PspPPI	RGGWCCY	1 cut(s)	2065
PsrI	GAACNNNNNNTAC	2 cut(s)	2553, 2585
PstNI	CAGNNNCTG	1 cut(s)	2111
PsuI	RGATCY	2 cut(s)	733, 847
PsyI	GACNNNGTC	1 cut(s)	2069
PvuII	CAGCTG	2 cut(s)	2184, 2480
RseI	CAYNNNNRTG	3 cut(s)	1140, 1812, 2301
SapI	GCTCTTC	1 cut(s)	1455
SaqAI	TTAA	8 cut(s)	110, 549, 720, 765, 777, 785, 1211, 2325
SatI	GCNGC	9 cut(s)	27, 30, 857, 1133, 1269, 1392, 1559, 1992, 2481
Sau96I	GGNCC	5 cut(s)	260, 971, 1114, 1594, 2065
SchI	GAGTC	1 cut(s)	422
ScrFI	CCNGG	7 cut(s)	258, 1043, 1044, 1196, 1433, 1598, 2407
SduI	GDGCHC	2 cut(s)	1056, 1462
SfaNI	GCATC	8 cut(s)	654, 779, 2218, 2251, 2305, 2323, 2444, 2477
Sfr274I	CTCGAG	1 cut(s)	1964
SgrAI	CRCCGGYG	1 cut(s)	62
SinI	GGWCC	4 cut(s)	971, 1114, 1594, 2065
SlaI	CTCGAG	1 cut(s)	1964
SmaI	CCCGGG	1 cut(s)	1044
SmiMI	CAYNNNNRTG	3 cut(s)	1140, 1812, 2301
SmlI	CTYRAG	2 cut(s)	784, 1964
SmoI	CTYRAG	2 cut(s)	784, 1964
Sse9I	AATT	9 cut(s)	4, 320, 528, 1245, 1778, 1855, 1898, 2282, 2488
SsiI	CCGC	8 cut(s)	27, 863, 1261, 1456, 1537, 1544, 1558, 2623
SspI	AATATT	2 cut(s)	997, 1220
SspMI	CTAG	5 cut(s)	1092, 1205, 1502, 1629, 1860
StyD4I	CCNGG	7 cut(s)	256, 1041, 1042, 1194, 1431, 1596, 2405
StyI	CCWWGG	2 cut(s)	512, 2038
TaiI	ACGT	4 cut(s)	174, 354, 1987, 2566
TaqI	TCGA	6 cut(s)	126, 1668, 1965, 2061, 2462, 2559
TasI	AATT	9 cut(s)	4, 320, 528, 1245, 1778, 1855, 1898, 2282, 2488
TatI	WGTACW	6 cut(s)	570, 915, 1486, 2135, 2389, 2589
TauI	GCSGC	2 cut(s)	29, 1561
TfiI	GAWTC	4 cut(s)	1381, 1426, 2102, 2195
Tru1I	TTAA	8 cut(s)	110, 549, 720, 765, 777, 785, 1211, 2325
Tru9I	TTAA	8 cut(s)	110, 549, 720, 765, 777, 785, 1211, 2325
TscAI	CASTG	5 cut(s)	652, 885, 1746, 2210, 2238
TseFI	GTSAC	3 cut(s)	252, 1631, 2087
TseI	GCWGC	7 cut(s)	29, 856, 1132, 1268, 1391, 1991, 2480
Tsp45I	GTSAC	3 cut(s)	252, 1631, 2087
TspMI	CCCGGG	1 cut(s)	1042
TspRI	CASTG	5 cut(s)	652, 885, 1746, 2210, 2238
Tth111I	GACNNNGTC	1 cut(s)	2069
Van91I	CCANNNNNTGG	1 cut(s)	2516
Vha464I	CTTAAG	1 cut(s)	784
VpaK11BI	GGWCC	4 cut(s)	971, 1114, 1594, 2065
XagI	CCTNNNNNAGG	2 cut(s)	741, 1085
XapI	RAATTY	5 cut(s)	320, 1778, 1898, 2282, 2488
XbaI	TCTAGA	1 cut(s)	1204
XceI	RCATGY	3 cut(s)	922, 1023, 2509
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1574, 2123
XhoI	CTCGAG	1 cut(s)	1964
XmaI	CCCGGG	1 cut(s)	1042
XmnI	GAANNNNTTC	1 cut(s)	2565
XspI	CTAG	5 cut(s)	1092, 1205, 1502, 1629, 1860
Zsp2I	ATGCAT	3 cut(s)	669, 794, 2266

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.