AT3G03910

Belongs to the Glu Leu Phe Val dehydrogenases family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Forward (+)
1006780 .. 1009018
2239 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G03910.2

Sequence Viewer

Length: 1236 bp
ATGAATGCTTTAGCAGCAACCAACAGAAACTTCAAGCTTGCTTCTAGGCTTCTTGGTTTAGACTCAAAGCTCGAGAAAAGTCTTCTCATTCCCTTCAGAGAGATCAAGGTGGAATGTACCATACCAAAAGACGATGGAACTCTAGCATCCTTTGTTGGATTCAGAGTTCAACACGACAATGCAAGAGGTCCCATGAAAGGTGGAATCAGATATCATCCAGAGGTTGAACCGGATGAAGTAAACGCTTTGGCTCAACTTATGACATGGAAAACAGCAGTGGCTAAGATACCTTATGGAGGAGCCAAAGGAGGAATCGGTTGTGACCCGAGCGAGCTAAGTCTCTCAGAGCTCGAACGTTTGACTCGAGTTTTCACTCAGAAGATTCACGATCTTATTGGGATTCATACTGATGTTCCAGCTCCTGATATGGGAACCGGTCCTCAGACAATGGCTTGGATTCTTGATGAATACTCAAAATTCCATGGACATTCTCCTGCTGTTGTCACTGGAAAACCCATTGATCTTGGTGGATCTCTTGGGAGAGATGCTGCTACAGGAAGAGGAGTGTTGTTTGCAACAGAAGCTTTACTCAACGAACATGGAAAGACCATATCTGGACAGCGATTCGCCATCCAGGGCTTTGGAAATGTGGGTTCTTGGGCAGCGAAGTTGATAAGTGACAAAGGTGGTAAGATTGTGGCGGTGAGTGATGTCACAGGAGCAATCAAGAACAATAATGGAATTGACATCTTGAGTTTGCTCGAGCATGCTGAAGAAAACAGAGGAATCAAAGGGTTTGATGGTGCTGATTCAATCGATCCTGATTCGATTCTTGTCGAAGATTGTGATATTCTTGTCCCTGCAGCTCTAGGGGGAGTCATCAACAGGGAAAATGCAAACGAAATAAAAGCCAAATTCATCATTGAAGGTGCTAATCACCCAACTGATCCTGAGGCTGACGAGATCTTGAAGAAGAAAGGTGTTATGATCCTCCCAGATATATACGCAAACTCAGGAGGAGTCACTGTAAGTTACTTCGAGTGGGTTCAGAACATACAAGGATTCATGTGGGATGAGGAAAAGGTGAATAGGGAGCTAAAGACCTACATGACTCGCGGGTTCAAAGACTTGAAAGAAATGTGTCAGACGCACTCATGTGATCTCCGTATGGGAGCTTTCACCCTCGGTATTAATCGTGTCGCTCAAGCTACCACTATCAGAGGCTGGGGTTCTTGA

Protein Analysis

411

Amino Acids

44.53

Weight (kDa)

5.75

Isoelectric Point (pI)

20.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ELFV_dehydrog_N PF02812 33 - 159 4e-51 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
ELFV_dehydrog PF00208 176 - 350 2.8e-64 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 1116
AciI CCGC 2 cut(s) 701, 1116
AclI AACGTT 1 cut(s) 355
AclWI GGATC 4 cut(s) 538, 812, 941, 982
AcsI RAATTY 2 cut(s) 476, 914
AcuI CTGAAG 2 cut(s) 79, 792
AfaI GTAC 1 cut(s) 118
AfiI CCNNNNNNNGG 3 cut(s) 197, 296, 428
AgeI ACCGGT 1 cut(s) 434
AgsI TTSAA 8 cut(s) 34, 170, 227, 813, 926, 970, 1123, 1132
AjnI CCWGG 1 cut(s) 633
AjuI GAANNNNNNNTTGG 2 cut(s) 14, 46
AleI CACNNNNGTG 1 cut(s) 1155
AloI GAACNNNNNNTCC 2 cut(s) 150, 182
Alw21I GWGCWC 1 cut(s) 351
Alw26I GTCTC 1 cut(s) 344
AlwI GGATC 4 cut(s) 538, 812, 941, 982
AlwNI CAGNNNCTG 2 cut(s) 422, 1224
Ama87I CYCGRG 4 cut(s) 71, 325, 363, 761
ApeKI GCWGC 4 cut(s) 14, 548, 662, 863
ApoI RAATTY 2 cut(s) 476, 914
AseI ATTAAT 1 cut(s) 1191
AsiGI ACCGGT 1 cut(s) 434
AspS9I GGNCC 2 cut(s) 188, 437
AsuHPI GGTGA 4 cut(s) 715, 929, 1096, 1171
AvaI CYCGRG 4 cut(s) 71, 325, 363, 761
AvaII GGWCC 2 cut(s) 188, 437
AxyI CCTNAGG 1 cut(s) 951
BanII GRGCYC 1 cut(s) 351
BbsI GAAGAC 1 cut(s) 74
Bbv12I GWGCWC 1 cut(s) 351
BbvI GCAGC 4 cut(s) 26, 535, 674, 875
BccI CCATC 3 cut(s) 128, 638, 794
BciT130I CCWGG 1 cut(s) 635
BcoDI GTCTC 1 cut(s) 344
BfaI CTAG 3 cut(s) 45, 143, 869
BfmI CTRYAG 2 cut(s) 552, 861
BglII AGATCT 1 cut(s) 963
BisI GCNGC 4 cut(s) 15, 549, 663, 864
BlsI GCNGC 4 cut(s) 16, 550, 664, 865
Bme1390I CCNGG 1 cut(s) 635
Bme18I GGWCC 2 cut(s) 188, 437
BmeT110I CYCGRG 4 cut(s) 71, 325, 363, 761
BmgT120I GGNCC 2 cut(s) 188, 437
BmiI GGNNCC 3 cut(s) 190, 301, 433
BmrFI CCNGG 1 cut(s) 635
BmsI GCATC 2 cut(s) 155, 535
BpiI GAAGAC 1 cut(s) 74
BpuEI CTTGAG 2 cut(s) 772, 1188
Bsa29I ATCGAT 1 cut(s) 816
BsaJI CCNNGG 3 cut(s) 481, 634, 1183
BsaWI WCCGGW 2 cut(s) 229, 434
BsaXI ACNNNNNCTCC 2 cut(s) 1011, 1041
Bsc4I CCNNNNNNNGG 3 cut(s) 197, 296, 428
Bse118I RCCGGY 1 cut(s) 434
Bse1I ACTGG 1 cut(s) 511
Bse21I CCTNAGG 1 cut(s) 951
BseBI CCWGG 1 cut(s) 635
BseCI ATCGAT 1 cut(s) 816
BseDI CCNNGG 3 cut(s) 481, 634, 1183
BseGI GGATG 5 cut(s) 146, 214, 238, 630, 1078
BseLI CCNNNNNNNGG 3 cut(s) 197, 296, 428
BseMII CTCAG 5 cut(s) 357, 389, 455, 942, 1026
BseNI ACTGG 1 cut(s) 511
BseRI GAGGAG 3 cut(s) 312, 576, 1032
BseXI GCAGC 4 cut(s) 26, 535, 674, 875
BseYI CCCAGC 1 cut(s) 1224
Bsh1236I CGCG 1 cut(s) 1116
BshTI ACCGGT 1 cut(s) 434
BshVI ATCGAT 1 cut(s) 816
BsiHKAI GWGCWC 1 cut(s) 351
BsiHKCI CYCGRG 4 cut(s) 71, 325, 363, 761
BsiSI CCGG 2 cut(s) 230, 435
BslFI GGGAC 2 cut(s) 174, 842
BslI CCNNNNNNNGG 3 cut(s) 197, 296, 428
BsmAI GTCTC 1 cut(s) 344
BsmFI GGGAC 2 cut(s) 174, 842
BsmI GAATGC 1 cut(s) 10
BsoBI CYCGRG 4 cut(s) 71, 325, 363, 761
Bsp1286I GDGCHC 1 cut(s) 351
Bsp143I GATC 9 cut(s) 102, 388, 520, 530, 817, 946, 963, 987, 1159
Bsp19I CCATGG 1 cut(s) 481
BspACI CCGC 2 cut(s) 701, 1116
BspCNI CTCAG 5 cut(s) 356, 388, 454, 943, 1025
BspDI ATCGAT 1 cut(s) 816
BspFNI CGCG 1 cut(s) 1116
BspLI GGNNCC 3 cut(s) 190, 301, 433
BspMAI CTGCAG 1 cut(s) 865
BspPI GGATC 4 cut(s) 538, 812, 941, 982
BsrFI RCCGGY 1 cut(s) 434
BsrI ACTGG 1 cut(s) 511
BssAI RCCGGY 1 cut(s) 434
BssECI CCNNGG 3 cut(s) 481, 634, 1183
BssMI GATC 9 cut(s) 102, 388, 520, 530, 817, 946, 963, 987, 1159
BssT1I CCWWGG 1 cut(s) 481
Bst2UI CCWGG 1 cut(s) 635
Bst4CI ACNGT 1 cut(s) 1027
Bst6I CTCTTC 1 cut(s) 553
BstC8I GCNNGC 3 cut(s) 39, 332, 768
BstDEI CTNAG 7 cut(s) 282, 335, 343, 375, 441, 951, 1012
BstDSI CCRYGG 1 cut(s) 481
BstENI CCTNNNNNAGG 1 cut(s) 294
BstF5I GGATG 5 cut(s) 146, 214, 238, 630, 1078
BstFNI CGCG 1 cut(s) 1116
BstKTI GATC 9 cut(s) 105, 391, 523, 533, 820, 949, 966, 990, 1162
BstMAI GTCTC 1 cut(s) 344
BstMBI GATC 9 cut(s) 102, 388, 520, 530, 817, 946, 963, 987, 1159
BstMWI GCNNNNNNNGC 2 cut(s) 14, 581
BstNI CCWGG 1 cut(s) 635
BstNSI RCATGY 1 cut(s) 770
BstSCI CCNGG 1 cut(s) 633
BstSFI CTRYAG 2 cut(s) 552, 861
BstUI CGCG 1 cut(s) 1116
BstV1I GCAGC 4 cut(s) 26, 535, 674, 875
BstV2I GAAGAC 1 cut(s) 74
BstX2I RGATCY 2 cut(s) 530, 963
BstXI CCANNNNNNTGG 1 cut(s) 641
BstYI RGATCY 2 cut(s) 530, 963
Bsu15I ATCGAT 1 cut(s) 816
Bsu36I CCTNAGG 1 cut(s) 951
BsuTUI ATCGAT 1 cut(s) 816
BtgI CCRYGG 1 cut(s) 481
BtsCI GGATG 5 cut(s) 146, 214, 238, 630, 1078
BtsI GCAGTG 1 cut(s) 282
BtsIMutI CAGTG 3 cut(s) 282, 504, 1023
Cac8I GCNNGC 3 cut(s) 39, 332, 768
CaiI CAGNNNCTG 2 cut(s) 422, 1224
Cfr10I RCCGGY 1 cut(s) 434
Cfr13I GGNCC 2 cut(s) 188, 437
ClaI ATCGAT 1 cut(s) 816
CseI GACGC 1 cut(s) 1156
Csp6I GTAC 1 cut(s) 117
CspAI ACCGGT 1 cut(s) 434
CviAII CATG 8 cut(s) 193, 264, 482, 599, 767, 1066, 1108, 1155
CviQI GTAC 1 cut(s) 117
DdeI CTNAG 7 cut(s) 282, 335, 343, 375, 441, 951, 1012
DpnI GATC 9 cut(s) 104, 390, 522, 532, 819, 948, 965, 989, 1161
DpnII GATC 9 cut(s) 102, 388, 520, 530, 817, 946, 963, 987, 1159
Eam1104I CTCTTC 1 cut(s) 553
EarI CTCTTC 1 cut(s) 553
Ecl136II GAGCTC 1 cut(s) 349
Eco130I CCWWGG 1 cut(s) 481
Eco24I GRGCYC 1 cut(s) 351
Eco32I GATATC 1 cut(s) 212
Eco47I GGWCC 2 cut(s) 188, 437
Eco53kI GAGCTC 1 cut(s) 349
Eco57I CTGAAG 2 cut(s) 79, 792
Eco81I CCTNAGG 1 cut(s) 951
Eco88I CYCGRG 4 cut(s) 71, 325, 363, 761
EcoICRI GAGCTC 1 cut(s) 349
EcoNI CCTNNNNNAGG 1 cut(s) 294
EcoO109I RGGNCCY 1 cut(s) 188
EcoRII CCWGG 1 cut(s) 633
EcoRV GATATC 1 cut(s) 212
EcoT14I CCWWGG 1 cut(s) 481
EcoT38I GRGCYC 1 cut(s) 351
ErhI CCWWGG 1 cut(s) 481
FaeI CATG 8 cut(s) 196, 267, 485, 602, 770, 1069, 1111, 1158
FaqI GGGAC 2 cut(s) 174, 842
FatI CATG 8 cut(s) 192, 263, 481, 598, 766, 1065, 1107, 1154
FauI CCCGC 1 cut(s) 1109
Fnu4HI GCNGC 4 cut(s) 15, 549, 663, 864
FokI GGATG 5 cut(s) 133, 201, 245, 617, 1085
FriOI GRGCYC 1 cut(s) 351
Fsp4HI GCNGC 4 cut(s) 15, 549, 663, 864
FspBI CTAG 3 cut(s) 45, 143, 869
GluI GCNGC 4 cut(s) 15, 549, 663, 864
GsaI CCCAGC 1 cut(s) 1228
HapII CCGG 2 cut(s) 230, 435
HgaI GACGC 1 cut(s) 1156
Hin1II CATG 8 cut(s) 196, 267, 485, 602, 770, 1069, 1111, 1158
HindIII AAGCTT 2 cut(s) 35, 582
HpaII CCGG 2 cut(s) 230, 435
HphI GGTGA 4 cut(s) 715, 929, 1096, 1171
Hpy166II GTNNAC 1 cut(s) 241
Hpy188I TCNGA 9 cut(s) 98, 164, 209, 346, 378, 444, 1050, 1146, 1220
Hpy8I GTNNAC 1 cut(s) 241
HpyAV CCTTC 2 cut(s) 103, 920
HpyCH4III ACNGT 1 cut(s) 1027
HpyCH4IV ACGT 1 cut(s) 355
HpyCH4V TGCA 4 cut(s) 182, 575, 863, 896
HpyF10VI GCNNNNNNNGC 2 cut(s) 14, 581
HpyF3I CTNAG 7 cut(s) 282, 335, 343, 375, 441, 951, 1012
HpySE526I ACGT 1 cut(s) 355
Hsp92II CATG 8 cut(s) 196, 267, 485, 602, 770, 1069, 1111, 1158
Kzo9I GATC 9 cut(s) 102, 388, 520, 530, 817, 946, 963, 987, 1159
LmnI GCTCC 5 cut(s) 299, 424, 719, 1093, 1172
Lsp1109I GCAGC 4 cut(s) 26, 535, 674, 875
LweI GCATC 2 cut(s) 155, 535
MaeI CTAG 3 cut(s) 45, 143, 869
MaeII ACGT 1 cut(s) 355
MaeIII GTNAC 6 cut(s) 320, 502, 677, 712, 1021, 1031
MalI GATC 9 cut(s) 104, 390, 522, 532, 819, 948, 965, 989, 1161
MboI GATC 9 cut(s) 102, 388, 520, 530, 817, 946, 963, 987, 1159
MboII GAAGA 7 cut(s) 74, 391, 570, 785, 851, 982, 985
MflI RGATCY 2 cut(s) 530, 963
MhlI GDGCHC 1 cut(s) 351
MluCI AATT 3 cut(s) 476, 741, 914
MlyI GAGTC 5 cut(s) 56, 355, 885, 1029, 1105
MmeI TCCRAC 1 cut(s) 136
MseI TTAA 1 cut(s) 1191
MslI CAYNNNNRTG 3 cut(s) 177, 408, 1155
MspI CCGG 2 cut(s) 230, 435
MspR9I CCNGG 1 cut(s) 635
Mva1269I GAATGC 1 cut(s) 10
MvaI CCWGG 1 cut(s) 635
MvnI CGCG 1 cut(s) 1116
MwoI GCNNNNNNNGC 2 cut(s) 14, 581
NcoI CCATGG 1 cut(s) 481
NdeII GATC 9 cut(s) 102, 388, 520, 530, 817, 946, 963, 987, 1159
NlaIII CATG 8 cut(s) 196, 267, 485, 602, 770, 1069, 1111, 1158
NlaIV GGNNCC 3 cut(s) 190, 301, 433
NmuCI GTSAC 5 cut(s) 320, 502, 677, 712, 1021
NspI RCATGY 1 cut(s) 770
OliI CACNNNNGTG 1 cut(s) 1155
PaeI GCATGC 1 cut(s) 770
PaeR7I CTCGAG 3 cut(s) 71, 363, 761
PcsI WCGNNNNNNNCGW 1 cut(s) 361
PctI GAATGC 1 cut(s) 10
PinAI ACCGGT 1 cut(s) 434
PkrI GCNGC 4 cut(s) 16, 550, 664, 865
PleI GAGTC 5 cut(s) 56, 355, 884, 1028, 1105
PpsI GAGTC 5 cut(s) 56, 355, 884, 1028, 1105
PpuMI RGGWCCY 1 cut(s) 188
PshBI ATTAAT 1 cut(s) 1191
Psp124BI GAGCTC 1 cut(s) 351
Psp1406I AACGTT 1 cut(s) 355
Psp5II RGGWCCY 1 cut(s) 188
Psp6I CCWGG 1 cut(s) 633
PspFI CCCAGC 1 cut(s) 1224
PspGI CCWGG 1 cut(s) 633
PspN4I GGNNCC 3 cut(s) 190, 301, 433
PspPI GGNCC 2 cut(s) 188, 437
PspPPI RGGWCCY 1 cut(s) 188
PspXI VCTCGAGB 2 cut(s) 363, 761
PstI CTGCAG 1 cut(s) 865
PstNI CAGNNNCTG 2 cut(s) 422, 1224
PsuI RGATCY 2 cut(s) 530, 963
RsaI GTAC 1 cut(s) 118
RsaNI GTAC 1 cut(s) 117
RseI CAYNNNNRTG 3 cut(s) 177, 408, 1155
SacI GAGCTC 1 cut(s) 351
SaqAI TTAA 1 cut(s) 1191
SatI GCNGC 4 cut(s) 15, 549, 663, 864
Sau3AI GATC 9 cut(s) 102, 388, 520, 530, 817, 946, 963, 987, 1159
Sau96I GGNCC 2 cut(s) 188, 437
SchI GAGTC 5 cut(s) 56, 355, 885, 1029, 1105
ScrFI CCNGG 1 cut(s) 635
SduI GDGCHC 1 cut(s) 351
SfaNI GCATC 2 cut(s) 155, 535
SfcI CTRYAG 2 cut(s) 552, 861
Sfr274I CTCGAG 3 cut(s) 71, 363, 761
SinI GGWCC 2 cut(s) 188, 437
SlaI CTCGAG 3 cut(s) 71, 363, 761
SmiMI CAYNNNNRTG 3 cut(s) 177, 408, 1155
SmlI CTYRAG 5 cut(s) 71, 363, 751, 761, 1203
SmoI CTYRAG 5 cut(s) 71, 363, 751, 761, 1203
SphI GCATGC 1 cut(s) 770
Sse9I AATT 3 cut(s) 476, 741, 914
SsiI CCGC 2 cut(s) 701, 1116
SspMI CTAG 3 cut(s) 45, 143, 869
SstI GAGCTC 1 cut(s) 351
StyD4I CCNGG 1 cut(s) 633
StyI CCWWGG 1 cut(s) 481
TaaI ACNGT 1 cut(s) 1027
TaiI ACGT 1 cut(s) 358
TaqI TCGA 8 cut(s) 72, 351, 364, 762, 816, 827, 837, 1038
TasI AATT 3 cut(s) 476, 741, 914
Tru1I TTAA 1 cut(s) 1191
Tru9I TTAA 1 cut(s) 1191
TscAI CASTG 3 cut(s) 282, 511, 1030
TseFI GTSAC 5 cut(s) 320, 502, 677, 712, 1021
TseI GCWGC 4 cut(s) 14, 548, 662, 863
Tsp45I GTSAC 5 cut(s) 320, 502, 677, 712, 1021
TspDTI ATGAA 7 cut(s) 17, 209, 249, 392, 480, 907, 1054
TspGWI ACGGA 1 cut(s) 1154
TspRI CASTG 3 cut(s) 282, 511, 1030
VpaK11BI GGWCC 2 cut(s) 188, 437
VspI ATTAAT 1 cut(s) 1191
XagI CCTNNNNNAGG 1 cut(s) 294
XapI RAATTY 2 cut(s) 476, 914
XceI RCATGY 1 cut(s) 770
XhoI CTCGAG 3 cut(s) 71, 363, 761
XspI CTAG 3 cut(s) 45, 143, 869
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.