FvH4_1g28120

Belongs to the Glu Leu Phe Val dehydrogenases family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Reverse (-)
19967406 .. 19970425
3020 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g28120.t2

Sequence Viewer

Length: 1239 bp
ATGAATGCTTTAGCGGCAACAAACAGAAACTTTAAGTTGGCTGCCCGGATTTTGGGATTGGACTCGAAGCTTGAAAAGAGTTTACTGATACCATTTAGGGAAATCAAGGTGGAGTGTACTATCCCCAAAGATGACGGCAGTTTGGCTTCATATGTTGGCTTCAGAATCCAACATGACAATGCTAGAGGCCCCATGAAGGGAGGCATCAGATATCATCCAGAGGTTGAGCCTGATGAGGTGAATGCTTTAGCACAGCTGATGACATGGAAGACGGCCGTGGCTAACATCCCCTATGGAGGTGCCAAAGGTGGGATAGGATGTGATCCAGGGGAGCTCAGTGTTTCTGAGCTTGAACGACTCACCAGAGTTTTCACCCAAAAGATTCATGATCTTATTGGAATCCACACTGATGTTCCGGCACCGGATATGGGCACCGGTCCACAGACCATGGCCTGGATACTTGACGAGTACTCCAAATTCCATGGCTACTCACCTGCAGTTGTCACTGGGAAACCAACTGATCTTGGTGGATCATTGGGAAGAGATGCAGCAACTGGAAGAGGAGTACTATTTGCAACAGAGGCTTTACTGAATGAGTATGGGAAGACCATCTCCGGCCAACGCTTTGTTATACAGGGTTTTGGGAATGTGGGATCCTGGGCTGCCCAACTCATTCATGAGAAAGGTGGGAAAATAGTTGCAGTGAGTGACATCAGTGGAGCTATAAAGAACAGCCAAGGACTTGACATTCCAAGCCTACTCAAGCATGTCAAGGAACAAAGAGGTGTCAAGGGCTTCTATGGCGGAGAGTCGATACAAGATTCCAACTCAATTTTAGCTCAAGACTGTGACATTCTCATTCCTGCAGCACTTGGAGGTGTCATCAACAGGGAAAATGCAAATGATATAAAAGCCAAATTTATTATCGAAGCAGCAAATCATCCCACTGACCCCGAAGCCGATGAGATCTTGTCAAAGAAAGGTGTTGTTATTCTTCCTGATATTTATGCAAACTCTGGAGGAGTCACTGTTAGTTACTTCGAGTGGGTGCAGAACATTCAAGGTTTCCTGTGGGATGAAGAAAAGGTGAATAATGAGCTGAGGACTTACATGACTAAAGGCTTCAAAGATGTCAAGGAGATGTGCAAAACCCACAACTGTGACCTCCGCATGGGAGCCTTCACTCTTGGAGTTAATCGCGTTGCGCGGGCAACTGTCCTCAGGGGGTGGGAAGCCTGA

Protein Analysis

413

Amino Acids

44.7

Weight (kDa)

6.18

Isoelectric Point (pI)

26.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ELFV_dehydrog_N PF02812 33 - 159 4.1e-50 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
ELFV_dehydrog PF00208 176 - 409 1e-82 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 502
Acc36I ACCTGC 1 cut(s) 502
AccB1I GGYRCC 3 cut(s) 299, 418, 431
AccB7I CCANNNNNTGG 1 cut(s) 453
AccII CGCG 2 cut(s) 1200, 1207
AciI CCGC 4 cut(s) 14, 804, 1168, 1207
AclWI GGATC 4 cut(s) 317, 538, 648, 661
AcoI YGGCCR 2 cut(s) 273, 616
AcsI RAATTY 2 cut(s) 476, 917
AcuI CTGAAG 1 cut(s) 145
AfaI GTAC 3 cut(s) 118, 470, 567
AfiI CCNNNNNNNGG 8 cut(s) 52, 196, 197, 296, 309, 428, 453, 1171
AgeI ACCGGT 1 cut(s) 434
AgsI TTSAA 4 cut(s) 74, 353, 1061, 1126
AjnI CCWGG 3 cut(s) 325, 452, 656
AleI CACNNNNGTG 1 cut(s) 1158
AluBI AGCT 7 cut(s) 70, 256, 334, 349, 722, 839, 1099
AluI AGCT 7 cut(s) 70, 256, 334, 349, 722, 839, 1099
Alw21I GWGCWC 1 cut(s) 336
AlwI GGATC 4 cut(s) 317, 538, 648, 661
AlwNI CAGNNNCTG 1 cut(s) 554
AoxI GGCC 4 cut(s) 187, 273, 450, 616
ApeKI GCWGC 5 cut(s) 41, 548, 662, 866, 932
ApoI RAATTY 2 cut(s) 476, 917
AsiGI ACCGGT 1 cut(s) 434
AspLEI GCGC 1 cut(s) 1207
AspS9I GGNCC 2 cut(s) 188, 437
AsuC2I CCSGG 1 cut(s) 46
AsuHPI GGTGA 5 cut(s) 250, 352, 364, 483, 1099
AvaII GGWCC 1 cut(s) 437
AxyI CCTNAGG 1 cut(s) 1220
BaeGI GKGCMC 1 cut(s) 434
BamHI GGATCC 1 cut(s) 653
BanI GGYRCC 3 cut(s) 299, 418, 431
BanII GRGCYC 1 cut(s) 336
BbsI GAAGAC 2 cut(s) 275, 611
Bbv12I GWGCWC 1 cut(s) 336
BbvCI CCTCAGC 1 cut(s) 1100
BbvI GCAGC 5 cut(s) 28, 560, 649, 878, 944
BccI CCATC 1 cut(s) 617
BceAI ACGGC 3 cut(s) 151, 260, 288
BciT130I CCWGG 3 cut(s) 327, 454, 658
BciVI GTATCC 1 cut(s) 450
BcnI CCSGG 1 cut(s) 46
BfaI CTAG 1 cut(s) 183
BfmI CTRYAG 2 cut(s) 495, 864
BfuAI ACCTGC 1 cut(s) 502
BfuI GTATCC 1 cut(s) 450
BglII AGATCT 1 cut(s) 966
BisI GCNGC 6 cut(s) 15, 42, 549, 663, 867, 933
BlsI GCNGC 6 cut(s) 16, 43, 550, 664, 868, 934
BmcAI AGTACT 2 cut(s) 470, 567
Bme1390I CCNGG 4 cut(s) 46, 327, 454, 658
Bme18I GGWCC 1 cut(s) 437
BmgT120I GGNCC 2 cut(s) 188, 437
BmiI GGNNCC 6 cut(s) 190, 301, 420, 433, 655, 1177
BmrFI CCNGG 4 cut(s) 46, 327, 454, 658
BmrI ACTGGG 1 cut(s) 516
BmsI GCATC 2 cut(s) 213, 535
BmuI ACTGGG 1 cut(s) 516
BpiI GAAGAC 2 cut(s) 275, 611
BpmI CTGGAG 1 cut(s) 1038
Bpu10I CCTNAGC 1 cut(s) 1100
BpuEI CTTGAG 2 cut(s) 746, 825
BpuMI CCSGG 1 cut(s) 46
BsaJI CCNNGG 6 cut(s) 276, 326, 447, 481, 657, 736
BsaWI WCCGGW 2 cut(s) 421, 434
BsaXI ACNNNNNCTCC 4 cut(s) 455, 485, 1014, 1044
Bsc4I CCNNNNNNNGG 8 cut(s) 52, 196, 197, 296, 309, 428, 453, 1171
Bse118I RCCGGY 1 cut(s) 434
Bse1I ACTGG 2 cut(s) 511, 559
Bse21I CCTNAGG 1 cut(s) 1220
BseBI CCWGG 3 cut(s) 327, 454, 658
BseDI CCNNGG 6 cut(s) 276, 326, 447, 481, 657, 736
BseGI GGATG 5 cut(s) 214, 285, 323, 940, 1081
BseLI CCNNNNNNNGG 8 cut(s) 52, 196, 197, 296, 309, 428, 453, 1171
BseMII CTCAG 4 cut(s) 336, 349, 1091, 1234
BseNI ACTGG 2 cut(s) 511, 559
BseRI GAGGAG 2 cut(s) 576, 1035
BseSI GKGCMC 1 cut(s) 434
BseX3I CGGCCG 1 cut(s) 273
BseXI GCAGC 5 cut(s) 28, 560, 649, 878, 944
BsgI GTGCAG 1 cut(s) 1070
Bsh1236I CGCG 2 cut(s) 1200, 1207
Bsh1285I CGRYCG 1 cut(s) 276
BshFI GGCC 4 cut(s) 189, 275, 452, 618
BshNI GGYRCC 3 cut(s) 299, 418, 431
BshTI ACCGGT 1 cut(s) 434
BsiEI CGRYCG 1 cut(s) 276
BsiHKAI GWGCWC 1 cut(s) 336
BsiSI CCGG 5 cut(s) 46, 416, 422, 435, 615
BslI CCNNNNNNNGG 8 cut(s) 52, 196, 197, 296, 309, 428, 453, 1171
BsmI GAATGC 2 cut(s) 10, 247
BsnI GGCC 4 cut(s) 189, 275, 452, 618
Bsp1286I GDGCHC 2 cut(s) 336, 434
Bsp143I GATC 6 cut(s) 322, 388, 520, 530, 653, 966
Bsp19I CCATGG 2 cut(s) 447, 481
BspACI CCGC 4 cut(s) 14, 804, 1168, 1207
BspANI GGCC 4 cut(s) 189, 275, 452, 618
BspCNI CTCAG 4 cut(s) 337, 348, 1092, 1233
BspFNI CGCG 2 cut(s) 1200, 1207
BspHI TCATGA 2 cut(s) 385, 676
BspLI GGNNCC 6 cut(s) 190, 301, 420, 433, 655, 1177
BspMAI CTGCAG 2 cut(s) 499, 868
BspMI ACCTGC 1 cut(s) 502
BspPI GGATC 4 cut(s) 317, 538, 648, 661
BspT107I GGYRCC 3 cut(s) 299, 418, 431
BsrFI RCCGGY 1 cut(s) 434
BsrI ACTGG 2 cut(s) 511, 559
BssAI RCCGGY 1 cut(s) 434
BssECI CCNNGG 6 cut(s) 276, 326, 447, 481, 657, 736
BssMI GATC 6 cut(s) 322, 388, 520, 530, 653, 966
BssT1I CCWWGG 3 cut(s) 447, 481, 736
Bst2UI CCWGG 3 cut(s) 327, 454, 658
Bst4CI ACNGT 4 cut(s) 848, 1030, 1160, 1216
Bst6I CTCTTC 2 cut(s) 535, 553
BstC8I GCNNGC 1 cut(s) 1209
BstDEI CTNAG 4 cut(s) 335, 345, 1100, 1220
BstDSI CCRYGG 3 cut(s) 276, 447, 481
BstF5I GGATG 5 cut(s) 214, 285, 323, 940, 1081
BstFNI CGCG 2 cut(s) 1200, 1207
BstHHI GCGC 1 cut(s) 1207
BstKTI GATC 6 cut(s) 325, 391, 523, 533, 656, 969
BstMBI GATC 6 cut(s) 322, 388, 520, 530, 653, 966
BstMCI CGRYCG 1 cut(s) 276
BstMWI GCNNNNNNNGC 3 cut(s) 14, 581, 801
BstNI CCWGG 3 cut(s) 327, 454, 658
BstNSI RCATGY 1 cut(s) 770
BstSCI CCNGG 4 cut(s) 44, 325, 452, 656
BstSFI CTRYAG 2 cut(s) 495, 864
BstSLI GKGCMC 1 cut(s) 434
BstUI CGCG 2 cut(s) 1200, 1207
BstV1I GCAGC 5 cut(s) 28, 560, 649, 878, 944
BstV2I GAAGAC 2 cut(s) 275, 611
BstX2I RGATCY 2 cut(s) 653, 966
BstYI RGATCY 2 cut(s) 653, 966
BstZI CGGCCG 1 cut(s) 273
Bsu36I CCTNAGG 1 cut(s) 1220
BsuI GTATCC 1 cut(s) 450
BsuRI GGCC 4 cut(s) 189, 275, 452, 618
BtgI CCRYGG 3 cut(s) 276, 447, 481
BtsCI GGATG 5 cut(s) 214, 285, 323, 940, 1081
BtsI GCAGTG 1 cut(s) 708
BtsIMutI CAGTG 7 cut(s) 343, 405, 504, 708, 721, 945, 1026
BveI ACCTGC 1 cut(s) 502
Cac8I GCNNGC 1 cut(s) 1209
CaiI CAGNNNCTG 1 cut(s) 554
CciI TCATGA 2 cut(s) 385, 676
CfoI GCGC 1 cut(s) 1207
Cfr10I RCCGGY 1 cut(s) 434
Cfr13I GGNCC 2 cut(s) 188, 437
Csp6I GTAC 3 cut(s) 117, 469, 566
CspAI ACCGGT 1 cut(s) 434
CviQI GTAC 3 cut(s) 117, 469, 566
DdeI CTNAG 4 cut(s) 335, 345, 1100, 1220
DpnI GATC 6 cut(s) 324, 390, 522, 532, 655, 968
DpnII GATC 6 cut(s) 322, 388, 520, 530, 653, 966
EaeI YGGCCR 2 cut(s) 273, 616
EagI CGGCCG 1 cut(s) 273
Eam1104I CTCTTC 2 cut(s) 535, 553
EarI CTCTTC 2 cut(s) 535, 553
EciI GGCGGA 1 cut(s) 819
Ecl136II GAGCTC 1 cut(s) 334
EclXI CGGCCG 1 cut(s) 273
Eco130I CCWWGG 3 cut(s) 447, 481, 736
Eco24I GRGCYC 1 cut(s) 336
Eco32I GATATC 1 cut(s) 212
Eco47I GGWCC 1 cut(s) 437
Eco52I CGGCCG 1 cut(s) 273
Eco53kI GAGCTC 1 cut(s) 334
Eco57I CTGAAG 1 cut(s) 145
Eco81I CCTNAGG 1 cut(s) 1220
EcoICRI GAGCTC 1 cut(s) 334
EcoO109I RGGNCCY 1 cut(s) 188
EcoRII CCWGG 3 cut(s) 325, 452, 656
EcoRV GATATC 1 cut(s) 212
EcoT14I CCWWGG 3 cut(s) 447, 481, 736
EcoT38I GRGCYC 1 cut(s) 336
ErhI CCWWGG 3 cut(s) 447, 481, 736
FauI CCCGC 1 cut(s) 1200
FauNDI CATATG 1 cut(s) 151
Fnu4HI GCNGC 6 cut(s) 15, 42, 549, 663, 867, 933
FokI GGATG 5 cut(s) 201, 272, 330, 927, 1088
FriOI GRGCYC 1 cut(s) 336
Fsp4HI GCNGC 6 cut(s) 15, 42, 549, 663, 867, 933
FspBI CTAG 1 cut(s) 183
GlaI GCGC 1 cut(s) 1206
GluI GCNGC 6 cut(s) 15, 42, 549, 663, 867, 933
GsuI CTGGAG 1 cut(s) 1038
HaeIII GGCC 4 cut(s) 189, 275, 452, 618
HapII CCGG 5 cut(s) 46, 416, 422, 435, 615
HhaI GCGC 1 cut(s) 1207
Hin6I GCGC 1 cut(s) 1205
HinP1I GCGC 1 cut(s) 1205
HindIII AAGCTT 1 cut(s) 68
HinfI GANTC 8 cut(s) 62, 165, 357, 382, 399, 809, 821, 1023
HpaII CCGG 5 cut(s) 46, 416, 422, 435, 615
HphI GGTGA 5 cut(s) 250, 352, 364, 483, 1099
Hpy166II GTNNAC 3 cut(s) 83, 117, 440
Hpy188I TCNGA 3 cut(s) 164, 209, 346
Hpy188III TCNNGA 6 cut(s) 218, 386, 677, 842, 998, 1017
Hpy8I GTNNAC 3 cut(s) 83, 117, 440
HpyAV CCTTC 2 cut(s) 190, 1189
HpyCH4III ACNGT 4 cut(s) 848, 1030, 1160, 1216
HpyCH4V TGCA 9 cut(s) 497, 548, 575, 701, 866, 899, 1010, 1051, 1146
HpyF10VI GCNNNNNNNGC 3 cut(s) 14, 581, 801
HpyF3I CTNAG 4 cut(s) 335, 345, 1100, 1220
HspAI GCGC 1 cut(s) 1205
Kzo9I GATC 6 cut(s) 322, 388, 520, 530, 653, 966
LmnI GCTCC 3 cut(s) 331, 719, 1175
Lsp1109I GCAGC 5 cut(s) 28, 560, 649, 878, 944
LweI GCATC 2 cut(s) 213, 535
MaeI CTAG 1 cut(s) 183
MaeIII GTNAC 6 cut(s) 502, 707, 848, 1024, 1034, 1160
MalI GATC 6 cut(s) 324, 390, 522, 532, 655, 968
MboI GATC 6 cut(s) 322, 388, 520, 530, 653, 966
MboII GAAGA 6 cut(s) 280, 552, 570, 616, 986, 1091
MflI RGATCY 2 cut(s) 653, 966
MhlI GDGCHC 2 cut(s) 336, 434
MluCI AATT 3 cut(s) 476, 831, 917
MlyI GAGTC 4 cut(s) 56, 351, 818, 1032
MmeI TCCRAC 2 cut(s) 193, 849
MseI TTAA 2 cut(s) 33, 1194
MslI CAYNNNNRTG 3 cut(s) 177, 408, 1158
MspA1I CMGCKG 1 cut(s) 256
MspI CCGG 5 cut(s) 46, 416, 422, 435, 615
MspR9I CCNGG 4 cut(s) 46, 327, 454, 658
Mva1269I GAATGC 2 cut(s) 10, 247
MvaI CCWGG 3 cut(s) 327, 454, 658
MvnI CGCG 2 cut(s) 1200, 1207
MwoI GCNNNNNNNGC 3 cut(s) 14, 581, 801
NciI CCSGG 1 cut(s) 46
NcoI CCATGG 2 cut(s) 447, 481
NdeI CATATG 1 cut(s) 151
NdeII GATC 6 cut(s) 322, 388, 520, 530, 653, 966
NlaIV GGNNCC 6 cut(s) 190, 301, 420, 433, 655, 1177
NmuCI GTSAC 5 cut(s) 502, 707, 848, 1024, 1160
NspI RCATGY 1 cut(s) 770
OliI CACNNNNGTG 1 cut(s) 1158
PagI TCATGA 2 cut(s) 385, 676
PaqCI CACCTGC 1 cut(s) 502
PctI GAATGC 2 cut(s) 10, 247
PfeI GAWTC 4 cut(s) 165, 382, 399, 821
PflMI CCANNNNNTGG 1 cut(s) 453
PinAI ACCGGT 1 cut(s) 434
PkrI GCNGC 6 cut(s) 16, 43, 550, 664, 868, 934
PleI GAGTC 4 cut(s) 56, 351, 817, 1031
PpsI GAGTC 4 cut(s) 56, 351, 817, 1031
Psp124BI GAGCTC 1 cut(s) 336
Psp6I CCWGG 3 cut(s) 325, 452, 656
PspGI CCWGG 3 cut(s) 325, 452, 656
PspN4I GGNNCC 6 cut(s) 190, 301, 420, 433, 655, 1177
PspPI GGNCC 2 cut(s) 188, 437
PstI CTGCAG 2 cut(s) 499, 868
PstNI CAGNNNCTG 1 cut(s) 554
PsuI RGATCY 2 cut(s) 653, 966
PvuII CAGCTG 1 cut(s) 256
RsaI GTAC 3 cut(s) 118, 470, 567
RsaNI GTAC 3 cut(s) 117, 469, 566
RseI CAYNNNNRTG 3 cut(s) 177, 408, 1158
SacI GAGCTC 1 cut(s) 336
SaqAI TTAA 2 cut(s) 33, 1194
SatI GCNGC 6 cut(s) 15, 42, 549, 663, 867, 933
Sau3AI GATC 6 cut(s) 322, 388, 520, 530, 653, 966
Sau96I GGNCC 2 cut(s) 188, 437
ScaI AGTACT 2 cut(s) 470, 567
SchI GAGTC 4 cut(s) 56, 351, 818, 1032
ScrFI CCNGG 4 cut(s) 46, 327, 454, 658
SduI GDGCHC 2 cut(s) 336, 434
SfaNI GCATC 2 cut(s) 213, 535
SfcI CTRYAG 2 cut(s) 495, 864
SinI GGWCC 1 cut(s) 437
SmiMI CAYNNNNRTG 3 cut(s) 177, 408, 1158
SmlI CTYRAG 2 cut(s) 761, 840
SmoI CTYRAG 2 cut(s) 761, 840
Sse9I AATT 3 cut(s) 476, 831, 917
SsiI CCGC 4 cut(s) 14, 804, 1168, 1207
SspMI CTAG 1 cut(s) 183
SstI GAGCTC 1 cut(s) 336
StyD4I CCNGG 4 cut(s) 44, 325, 452, 656
StyI CCWWGG 3 cut(s) 447, 481, 736
TaaI ACNGT 4 cut(s) 848, 1030, 1160, 1216
TaqI TCGA 4 cut(s) 65, 812, 927, 1041
TasI AATT 3 cut(s) 476, 831, 917
TatI WGTACW 3 cut(s) 116, 468, 565
TauI GCSGC 1 cut(s) 17
TfiI GAWTC 4 cut(s) 165, 382, 399, 821
Tru1I TTAA 2 cut(s) 33, 1194
Tru9I TTAA 2 cut(s) 33, 1194
TscAI CASTG 7 cut(s) 343, 412, 511, 708, 721, 952, 1033
TseFI GTSAC 5 cut(s) 502, 707, 848, 1024, 1160
TseI GCWGC 5 cut(s) 41, 548, 662, 866, 932
Tsp45I GTSAC 5 cut(s) 502, 707, 848, 1024, 1160
TspDTI ATGAA 6 cut(s) 17, 138, 209, 374, 665, 1092
TspRI CASTG 7 cut(s) 343, 412, 511, 708, 721, 952, 1033
Van91I CCANNNNNTGG 1 cut(s) 453
VpaK11BI GGWCC 1 cut(s) 437
XapI RAATTY 2 cut(s) 476, 917
XceI RCATGY 1 cut(s) 770
XspI CTAG 1 cut(s) 183
ZrmI AGTACT 2 cut(s) 470, 567
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.