Rh3DG369200

Belongs to the Glu Leu Phe Val dehydrogenases family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
Physical Location & Seq
Forward (+)
46727474 .. 46729333
1860 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG369200.1

Sequence Viewer

Length: 1239 bp
ATGAACGCTTTAGTAGCAACAAACAGAAATTTTAAGTTGGCTGCTCGACTGTTGGGATTGGACTCGAAGCTTGAACAGAGTTTACTCATACCATTTAGGGAAATCAAGGTCGAGTGCACTATCCCCAAAGATGATGGCAGTTTGGCTTCATATGTTGGCTTCAGAATTCAACATGACAATGCTAGAGGCCCCATGAAGGGAGGCATCAGATATCACCCAGAGGTTGAGCCAGACGAGGTGAATGCCTTAGCACAGCTGATGACATGGAAGACGGCGGTAGCTAACATCCCATATGGTGGTGCCAAGGGTGGGATAGGATGTGATCCAGGGAAGCTCAGTATTTCAGAGCTTGAGAGACTCACCAGAGTTTTCACCCAAAAGATTCATGATCTTATTGGAATCCACACTGATGTTCCAGCACCAGATATGGGCACTGGTCCACAGACCATGGCTTGGATACTTGATGAGTACTCCAAATTCCATGGCTACTCACCTGCAGTTGTCACTGGGAAACCTACTGATCTTGGTGGATCATTGGGAAGAGATGCAGCAACTGGAAGAGGAGTACTTTTTGCAACAGAGGCTTTACTGAATGAGTATGGGAAGACCATCTCCGGACAACGCTTTGTTATACAGGGATTTGGGAATGTGGGATCCTGGGCTGCCCAACTCATTCATGAGAAAGGTGGGAAAATAGTTGCAGTGAGTGACATCAGTGGAGCTATAAAGAACAGCCAAGGACTTGACATTCCAAGCCTACTCAACCATGTCAAGGAACAAAGAGGTGTCAAGGGCTTCCATGGCGGGGAGTCCATACAAGATTCCCACTCAATTTTAACTGAAGACTGTGACATTCTCATTCCTGCAGCACTTGGAGGTGTCATCAACAGGGAAAATGCAAATGATATAAAAGCCAAATTTATTATCGAAGCAGCTAATCATCCCACTGACCCCGAAGCGGATGAGATCTTGTCAAAGAAAGGTGTTGTTATTCTTCCTGATATATATGCAAACTCTGGAGGAGTCACTGTTAGTTACTTCGAATGGGTGCAGAACATCCAAGGTTTCCTGTGGGATGAAGAAAAAGTGAATAATGAGCTGAGGACTTACATGACTAGAGGCTTCAAAAATGTCAAGGAGATGTGCAAAACCCACAACTGTGACCTCCGGATGGGAGCCTTCACTCTCGGAGTTAATCGCGTTGCACGGGCTACTGTCCTCAGGGGGTGGGAAGCCTAA

Protein Analysis

412

Amino Acids

44.78

Weight (kDa)

6.28

Isoelectric Point (pI)

27.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ELFV_dehydrog_N PF02812 33 - 159 4.7e-50 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
ELFV_dehydrog PF00208 176 - 409 7.9e-83 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 502
Acc36I ACCTGC 1 cut(s) 502
AccB1I GGYRCC 1 cut(s) 299
AccB7I CCANNNNNTGG 2 cut(s) 296, 453
AccII CGCG 1 cut(s) 1200
AccIII TCCGGA 2 cut(s) 614, 1167
AciI CCGC 3 cut(s) 275, 804, 959
AclWI GGATC 4 cut(s) 317, 538, 648, 661
AcsI RAATTY 4 cut(s) 28, 165, 476, 917
AcuI CTGAAG 2 cut(s) 145, 861
AfaI GTAC 2 cut(s) 470, 567
AgsI TTSAA 3 cut(s) 74, 170, 1126
AjnI CCWGG 2 cut(s) 325, 656
AleI CACNNNNGTG 1 cut(s) 1158
AluBI AGCT 8 cut(s) 70, 256, 281, 334, 349, 722, 935, 1099
AluI AGCT 8 cut(s) 70, 256, 281, 334, 349, 722, 935, 1099
Alw21I GWGCWC 1 cut(s) 119
Alw26I GTCTC 1 cut(s) 349
Alw44I GTGCAC 1 cut(s) 115
AlwI GGATC 4 cut(s) 317, 538, 648, 661
AlwNI CAGNNNCTG 1 cut(s) 554
Aor13HI TCCGGA 2 cut(s) 614, 1167
AoxI GGCC 1 cut(s) 187
ApaLI GTGCAC 1 cut(s) 115
ApeKI GCWGC 5 cut(s) 41, 548, 662, 866, 932
ApoI RAATTY 4 cut(s) 28, 165, 476, 917
AspS9I GGNCC 2 cut(s) 188, 437
AsuHPI GGTGA 5 cut(s) 206, 250, 352, 364, 483
AsuII TTCGAA 1 cut(s) 1041
AvaII GGWCC 1 cut(s) 437
AxyI CCTNAGG 1 cut(s) 1220
BaeGI GKGCMC 2 cut(s) 119, 434
BamHI GGATCC 1 cut(s) 653
BanI GGYRCC 1 cut(s) 299
BbsI GAAGAC 3 cut(s) 275, 611, 849
Bbv12I GWGCWC 1 cut(s) 119
BbvCI CCTCAGC 1 cut(s) 1100
BbvI GCAGC 5 cut(s) 28, 560, 649, 878, 944
BccI CCATC 3 cut(s) 128, 617, 1165
BceAI ACGGC 1 cut(s) 288
BcgI CGANNNNNNTGC 2 cut(s) 224, 258
BciT130I CCWGG 2 cut(s) 327, 658
BciVI GTATCC 1 cut(s) 450
BcoDI GTCTC 1 cut(s) 349
BfaI CTAG 2 cut(s) 183, 1116
BfmI CTRYAG 2 cut(s) 495, 864
BfuAI ACCTGC 1 cut(s) 502
BfuI GTATCC 1 cut(s) 450
BglII AGATCT 1 cut(s) 966
BisI GCNGC 5 cut(s) 42, 549, 663, 867, 933
BlsI GCNGC 5 cut(s) 43, 550, 664, 868, 934
BmcAI AGTACT 2 cut(s) 470, 567
Bme1390I CCNGG 2 cut(s) 327, 658
Bme18I GGWCC 1 cut(s) 437
BmgT120I GGNCC 2 cut(s) 188, 437
BmiI GGNNCC 4 cut(s) 190, 301, 655, 1177
BmrFI CCNGG 2 cut(s) 327, 658
BmrI ACTGGG 1 cut(s) 516
BmsI GCATC 2 cut(s) 213, 535
BmuI ACTGGG 1 cut(s) 516
BpiI GAAGAC 3 cut(s) 275, 611, 849
BpmI CTGGAG 1 cut(s) 1038
Bpu10I CCTNAGC 2 cut(s) 247, 1100
Bpu14I TTCGAA 1 cut(s) 1041
BpuEI CTTGAG 1 cut(s) 371
BsaJI CCNNGG 8 cut(s) 303, 326, 447, 481, 657, 736, 799, 1060
BsaWI WCCGGW 2 cut(s) 614, 1167
BsaXI ACNNNNNCTCC 2 cut(s) 1014, 1044
Bse1I ACTGG 3 cut(s) 439, 511, 559
Bse21I CCTNAGG 1 cut(s) 1220
BseAI TCCGGA 2 cut(s) 614, 1167
BseBI CCWGG 2 cut(s) 327, 658
BseDI CCNNGG 8 cut(s) 303, 326, 447, 481, 657, 736, 799, 1060
BseGI GGATG 7 cut(s) 285, 323, 940, 967, 1056, 1081, 1176
BseMII CTCAG 3 cut(s) 349, 1091, 1234
BseNI ACTGG 3 cut(s) 439, 511, 559
BseRI GAGGAG 2 cut(s) 576, 1035
BseSI GKGCMC 2 cut(s) 119, 434
BseXI GCAGC 5 cut(s) 28, 560, 649, 878, 944
BsgI GTGCAG 1 cut(s) 1070
Bsh1236I CGCG 1 cut(s) 1200
BshFI GGCC 1 cut(s) 189
BshNI GGYRCC 1 cut(s) 299
BsiHKAI GWGCWC 1 cut(s) 119
BsiSI CCGG 2 cut(s) 615, 1168
BsmAI GTCTC 1 cut(s) 349
BsmI GAATGC 1 cut(s) 247
BsnI GGCC 1 cut(s) 189
Bsp119I TTCGAA 1 cut(s) 1041
Bsp1286I GDGCHC 2 cut(s) 119, 434
Bsp13I TCCGGA 2 cut(s) 614, 1167
Bsp143I GATC 6 cut(s) 322, 388, 520, 530, 653, 966
Bsp19I CCATGG 3 cut(s) 447, 481, 799
BspACI CCGC 3 cut(s) 275, 804, 959
BspANI GGCC 1 cut(s) 189
BspCNI CTCAG 3 cut(s) 348, 1092, 1233
BspEI TCCGGA 2 cut(s) 614, 1167
BspFNI CGCG 1 cut(s) 1200
BspHI TCATGA 2 cut(s) 385, 676
BspLI GGNNCC 4 cut(s) 190, 301, 655, 1177
BspMAI CTGCAG 2 cut(s) 499, 868
BspMI ACCTGC 1 cut(s) 502
BspPI GGATC 4 cut(s) 317, 538, 648, 661
BspT104I TTCGAA 1 cut(s) 1041
BspT107I GGYRCC 1 cut(s) 299
BsrI ACTGG 3 cut(s) 439, 511, 559
BssECI CCNNGG 8 cut(s) 303, 326, 447, 481, 657, 736, 799, 1060
BssMI GATC 6 cut(s) 322, 388, 520, 530, 653, 966
BssT1I CCWWGG 6 cut(s) 303, 447, 481, 736, 799, 1060
Bst2UI CCWGG 2 cut(s) 327, 658
Bst4CI ACNGT 5 cut(s) 51, 848, 1030, 1160, 1216
Bst6I CTCTTC 2 cut(s) 535, 553
BstBI TTCGAA 1 cut(s) 1041
BstDEI CTNAG 4 cut(s) 247, 335, 1100, 1220
BstDSI CCRYGG 3 cut(s) 447, 481, 799
BstF5I GGATG 7 cut(s) 285, 323, 940, 967, 1056, 1081, 1176
BstFNI CGCG 1 cut(s) 1200
BstKTI GATC 6 cut(s) 325, 391, 523, 533, 656, 969
BstMAI GTCTC 1 cut(s) 349
BstMBI GATC 6 cut(s) 322, 388, 520, 530, 653, 966
BstMWI GCNNNNNNNGC 3 cut(s) 14, 581, 801
BstNI CCWGG 2 cut(s) 327, 658
BstSCI CCNGG 2 cut(s) 325, 656
BstSFI CTRYAG 2 cut(s) 495, 864
BstSLI GKGCMC 2 cut(s) 119, 434
BstUI CGCG 1 cut(s) 1200
BstV1I GCAGC 5 cut(s) 28, 560, 649, 878, 944
BstV2I GAAGAC 3 cut(s) 275, 611, 849
BstX2I RGATCY 2 cut(s) 653, 966
BstYI RGATCY 2 cut(s) 653, 966
Bsu36I CCTNAGG 1 cut(s) 1220
BsuI GTATCC 1 cut(s) 450
BsuRI GGCC 1 cut(s) 189
BtgI CCRYGG 3 cut(s) 447, 481, 799
BtsCI GGATG 7 cut(s) 285, 323, 940, 967, 1056, 1081, 1176
BtsI GCAGTG 1 cut(s) 708
BtsIMutI CAGTG 7 cut(s) 405, 432, 504, 708, 721, 945, 1026
BveI ACCTGC 1 cut(s) 502
CaiI CAGNNNCTG 1 cut(s) 554
CciI TCATGA 2 cut(s) 385, 676
Cfr13I GGNCC 2 cut(s) 188, 437
Csp6I GTAC 2 cut(s) 469, 566
CviQI GTAC 2 cut(s) 469, 566
DdeI CTNAG 4 cut(s) 247, 335, 1100, 1220
DpnI GATC 6 cut(s) 324, 390, 522, 532, 655, 968
DpnII GATC 6 cut(s) 322, 388, 520, 530, 653, 966
Eam1104I CTCTTC 2 cut(s) 535, 553
EarI CTCTTC 2 cut(s) 535, 553
Eco130I CCWWGG 6 cut(s) 303, 447, 481, 736, 799, 1060
Eco32I GATATC 1 cut(s) 212
Eco47I GGWCC 1 cut(s) 437
Eco57I CTGAAG 2 cut(s) 145, 861
Eco81I CCTNAGG 1 cut(s) 1220
EcoO109I RGGNCCY 1 cut(s) 188
EcoRI GAATTC 1 cut(s) 165
EcoRII CCWGG 2 cut(s) 325, 656
EcoRV GATATC 1 cut(s) 212
EcoT14I CCWWGG 6 cut(s) 303, 447, 481, 736, 799, 1060
ErhI CCWWGG 6 cut(s) 303, 447, 481, 736, 799, 1060
FauI CCCGC 1 cut(s) 797
FauNDI CATATG 2 cut(s) 151, 292
Fnu4HI GCNGC 5 cut(s) 42, 549, 663, 867, 933
FokI GGATG 7 cut(s) 272, 330, 927, 974, 1043, 1088, 1183
Fsp4HI GCNGC 5 cut(s) 42, 549, 663, 867, 933
FspBI CTAG 2 cut(s) 183, 1116
GluI GCNGC 5 cut(s) 42, 549, 663, 867, 933
GsuI CTGGAG 1 cut(s) 1038
HaeIII GGCC 1 cut(s) 189
HapII CCGG 2 cut(s) 615, 1168
HindIII AAGCTT 1 cut(s) 68
HinfI GANTC 7 cut(s) 62, 357, 382, 399, 809, 821, 1023
HpaII CCGG 2 cut(s) 615, 1168
HphI GGTGA 5 cut(s) 206, 250, 352, 364, 483
Hpy166II GTNNAC 3 cut(s) 83, 117, 440
Hpy188I TCNGA 4 cut(s) 164, 209, 346, 1190
Hpy188III TCNNGA 6 cut(s) 386, 615, 677, 998, 1017, 1168
Hpy8I GTNNAC 3 cut(s) 83, 117, 440
HpyAV CCTTC 2 cut(s) 190, 1189
HpyCH4III ACNGT 5 cut(s) 51, 848, 1030, 1160, 1216
HpyF10VI GCNNNNNNNGC 3 cut(s) 14, 581, 801
HpyF3I CTNAG 4 cut(s) 247, 335, 1100, 1220
Kpn2I TCCGGA 2 cut(s) 614, 1167
Kzo9I GATC 6 cut(s) 322, 388, 520, 530, 653, 966
LmnI GCTCC 2 cut(s) 719, 1175
Lsp1109I GCAGC 5 cut(s) 28, 560, 649, 878, 944
LweI GCATC 2 cut(s) 213, 535
MaeI CTAG 2 cut(s) 183, 1116
MaeIII GTNAC 6 cut(s) 502, 707, 848, 1024, 1034, 1160
MalI GATC 6 cut(s) 324, 390, 522, 532, 655, 968
MboI GATC 6 cut(s) 322, 388, 520, 530, 653, 966
MboII GAAGA 7 cut(s) 280, 552, 570, 616, 854, 986, 1091
MflI RGATCY 2 cut(s) 653, 966
MhlI GDGCHC 2 cut(s) 119, 434
MluCI AATT 5 cut(s) 28, 165, 476, 831, 917
MlyI GAGTC 4 cut(s) 56, 351, 818, 1032
MroI TCCGGA 2 cut(s) 614, 1167
MseI TTAA 3 cut(s) 33, 836, 1194
MslI CAYNNNNRTG 3 cut(s) 177, 408, 1158
MspA1I CMGCKG 1 cut(s) 256
MspI CCGG 2 cut(s) 615, 1168
MspR9I CCNGG 2 cut(s) 327, 658
Mva1269I GAATGC 1 cut(s) 247
MvaI CCWGG 2 cut(s) 327, 658
MvnI CGCG 1 cut(s) 1200
MwoI GCNNNNNNNGC 3 cut(s) 14, 581, 801
NcoI CCATGG 3 cut(s) 447, 481, 799
NdeI CATATG 2 cut(s) 151, 292
NdeII GATC 6 cut(s) 322, 388, 520, 530, 653, 966
NlaIV GGNNCC 4 cut(s) 190, 301, 655, 1177
NmuCI GTSAC 5 cut(s) 502, 707, 848, 1024, 1160
NspV TTCGAA 1 cut(s) 1041
OliI CACNNNNGTG 1 cut(s) 1158
PagI TCATGA 2 cut(s) 385, 676
PaqCI CACCTGC 1 cut(s) 502
PctI GAATGC 1 cut(s) 247
PfeI GAWTC 3 cut(s) 382, 399, 821
PflMI CCANNNNNTGG 2 cut(s) 296, 453
PkrI GCNGC 5 cut(s) 43, 550, 664, 868, 934
PleI GAGTC 4 cut(s) 56, 351, 817, 1031
PpsI GAGTC 4 cut(s) 56, 351, 817, 1031
Psp6I CCWGG 2 cut(s) 325, 656
PspGI CCWGG 2 cut(s) 325, 656
PspN4I GGNNCC 4 cut(s) 190, 301, 655, 1177
PspPI GGNCC 2 cut(s) 188, 437
PsrI GAACNNNNNNTAC 2 cut(s) 66, 98
PstI CTGCAG 2 cut(s) 499, 868
PstNI CAGNNNCTG 1 cut(s) 554
PsuI RGATCY 2 cut(s) 653, 966
PvuII CAGCTG 1 cut(s) 256
RsaI GTAC 2 cut(s) 470, 567
RsaNI GTAC 2 cut(s) 469, 566
RseI CAYNNNNRTG 3 cut(s) 177, 408, 1158
SaqAI TTAA 3 cut(s) 33, 836, 1194
SatI GCNGC 5 cut(s) 42, 549, 663, 867, 933
Sau3AI GATC 6 cut(s) 322, 388, 520, 530, 653, 966
Sau96I GGNCC 2 cut(s) 188, 437
ScaI AGTACT 2 cut(s) 470, 567
SchI GAGTC 4 cut(s) 56, 351, 818, 1032
ScrFI CCNGG 2 cut(s) 327, 658
SduI GDGCHC 2 cut(s) 119, 434
SfaNI GCATC 2 cut(s) 213, 535
SfcI CTRYAG 2 cut(s) 495, 864
SfuI TTCGAA 1 cut(s) 1041
SinI GGWCC 1 cut(s) 437
SmiMI CAYNNNNRTG 3 cut(s) 177, 408, 1158
SmlI CTYRAG 1 cut(s) 350
SmoI CTYRAG 1 cut(s) 350
Sse9I AATT 5 cut(s) 28, 165, 476, 831, 917
SsiI CCGC 3 cut(s) 275, 804, 959
SspMI CTAG 2 cut(s) 183, 1116
StyD4I CCNGG 2 cut(s) 325, 656
StyI CCWWGG 6 cut(s) 303, 447, 481, 736, 799, 1060
TaaI ACNGT 5 cut(s) 51, 848, 1030, 1160, 1216
TaqI TCGA 5 cut(s) 46, 65, 111, 927, 1041
TasI AATT 5 cut(s) 28, 165, 476, 831, 917
TatI WGTACW 2 cut(s) 468, 565
TfiI GAWTC 3 cut(s) 382, 399, 821
Tru1I TTAA 3 cut(s) 33, 836, 1194
Tru9I TTAA 3 cut(s) 33, 836, 1194
TscAI CASTG 7 cut(s) 412, 439, 511, 708, 721, 952, 1033
TseFI GTSAC 5 cut(s) 502, 707, 848, 1024, 1160
TseI GCWGC 5 cut(s) 41, 548, 662, 866, 932
Tsp45I GTSAC 5 cut(s) 502, 707, 848, 1024, 1160
TspDTI ATGAA 6 cut(s) 17, 138, 209, 374, 665, 1092
TspRI CASTG 7 cut(s) 412, 439, 511, 708, 721, 952, 1033
Van91I CCANNNNNTGG 2 cut(s) 296, 453
VneI GTGCAC 1 cut(s) 115
VpaK11BI GGWCC 1 cut(s) 437
XapI RAATTY 4 cut(s) 28, 165, 476, 917
XspI CTAG 2 cut(s) 183, 1116
ZrmI AGTACT 2 cut(s) 470, 567
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.