Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002493

Physical Location & Seq

Genomic Coordinates Reverse (-)

1924270 .. 1927850

Gene Structure 3581 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G06350.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1812 bp

ATGGCAGCTTCTTCAACTAATGCTCGTCTCACCAACCCTCCTCGTCTACTCTCCAAACCCCGACTTTCACCTACCTCCGTCGCCAATCTCCGTTTTCCAGCCGCCGATTTCTCCACTCGCTTCTTTGCCGATTCTTCGTCCCCGCGGCTAAGGAGTGTACCGTTTCCGGTGGTATTTTCCGATCAAAGGCGCCGGCGAAGCATGGAACCTAGCAATGTCTATGTGGCTTCAAATTCCACGGAAATGGAGATCGGAAGTCATGATATCGTGAAGAATCCGAGCTTGATCTGTGCTCCAGTGATGGCGGATTCAATAGACAAGATGGTGATTGAAACGAGTAAAGCCCATGAATTGGGTGCAGACTTGGTTGAAATTCGATTAGATTGGCTAAAGGACTTCAATCCTCTTGAGGATCTAAAAACCATTATTAAGAAATCTCCTCTACCCACTTTATTCACCTACAGACCAAAATGGGAAGGTGGTCAGTATGAAGGTGATGAAAATGAGAGACGGGATGTGCTTCGTCTGGCCATGGAGTTGGGAGCTGATTATATTGATGTTGAACTTCAGGTGGCAAGTGAGTTCATCAAATCTATTGACGGAAAGAAGCCTGGAAAGTTCAAAGTAATTGTTTCATCGCACAACTATCAGAATACCCCTTCTGTTGAGGACCTTGATGGCCTTGTTGCAAGAATACAACAGACTGGAGCCGACATTGTTAAGATTGCTACTACTGCTGTGGACATTGCAGATGTTGCTCGCATGTTCCATATAACCTCAAAAGCTCAAGTTCCCACAATTGGACTTGTTATGGGTGAAAGAGGTTTGATGTCTCGGATTCTTTGTTCGAAATTTGGTGGTTATTTGACCTTTGGCACCTTAGATTCTAGTAAAGTTTCTGCGCCAGGTCAACCAACGATCAAGGATCTGTTGGATCTTTACAACTTTAGAAGAATTGGTCCTGACACAAAGGTATATGGAATTATTGGCAAGCCTGTCAGCCACAGCAAATCACCTATTGTTCACAATCAAGCTTTCAAATCAGTTGATTTTAATGGAGTATATGTCCACCTGTTAGTTGATAATCTTGTAAGCTTTCTTCAAGCATACTCATCCTCTGATTTCGCTGGATTCAGCTGTACAATTCCGCACAAAGAAGCTGCATTGCAATGTTGTGATGAAGTTGATCCATTGGCAAAGTCTATAGGAGCTGTGAACACTATACTAAGGAGAAAAAGTGACGGAAAGTTGTTGGGTTACAACACAGATTGTATTGGTTCCATTTCTGCTATTGAGGATGGCCTACGAAGTTCAGGTGATCCAAGCAGTGTACCTTCTTCTTCTTCGCCATTGGCCAGTAAAACAGTGGTGGTTATTGGTGCTGGTGGAGCAGGCAAGGCTCTTGCTTATGGTGCAAAAGAAAAGGGGGCCAAAGTTGTAATTGCTAATCGAACTTACGAACGAGCACTAGAACTCGCAGAAGCAATAGGAGGCAAAGCGTTATCTCTGACAGATTTAGATAACTATCACCCAGAAGATGGCATGGTTTTGGCAAACACAACATCTATGGGTATGCAACCAAATGTTGAGGAGACTCCAATTTCTAAGGATGCATTGAAGCACTATGCACTGGTCTTTGATGCGGTATACACTCCGAGAATCACCAGACTGTTGAGGGAAGCAGAAGAAAGTGGAGCCATAACTGTCTCAGGGTCAGAGATGTTTGTCAGGCAGGCTTACGAGCAGTTTGAGATCTTCACCGGTTTACCCGCTCCAAAGGAACTCTACTGGCAAATAATGTCAAAGTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004764 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009423 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0016053 GO:0016491 GO:0016614 GO:0016616 GO:0019632 GO:0019752 GO:0022414 GO:0032501 GO:0032502 GO:0032787 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043648 GO:0043650 GO:0044237 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046417 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0055114 GO:0061458 GO:0071704 GO:1901576 GO:1901615

KEGG Pathways

Metabolic & Signaling

ko00400 ko01100 ko01110 ko01130 ko01230 map00400 map01100 map01110 map01130 map01230

Pfam Domains

Protein Families

DHquinase_I Shikimate_DH Shikimate_dh_N

Protein Analysis

603

Amino Acids

65.8

Weight (kDa)

6.41

Isoelectric Point (pI)

40.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DHquinase_I	PF01487	97 - 314	1.7e-69	Type I 3-dehydroquinase
Shikimate_dh_N	PF08501	328 - 408	1.5e-27	Shikimate dehydrogenase substrate binding domain
Shikimate_DH	PF01488	450 - 533	2.9e-11	Shikimate / quinate 5-dehydrogenase
FAD_binding_2	PF00890	456 - 519	9.5e-07	FAD binding domain
F420_oxidored	PF03807	456 - 510	7.3e-06	NADP oxidoreductase coenzyme F420-dependent
SDH_C	PF18317	571 - 594	5.2e-08	Shikimate 5'-dehydrogenase C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002493)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06350
fragaria_vesca	FvH4_1g23213 FvH4_1g23213 FvH4_1g23213 FvH4_1g23232 FvH4_1g23232 FvH4_1g23232
malus_domestica	MD00G1130500.v1.1 MD15G1335600.v1.1
prunus_persica	Prupe.6G166100_v2.0.a1 Prupe.6G166100_v2.0.a1 Prupe.6G166100_v2.0.a1 Prupe.6G166200_v2.0.a1 Prupe.6G166200_v2.0.a1 Prupe.6G166200_v2.0.a1 Prupe.6G166200_v2.0.a1 Prupe.6G166200_v2.0.a1
pyrus_communis	pycom01g04680 pycom01g04700 pycom15g28990
rosa_chinensis	RchiOBHm_Chr2g0117991 RchiOBHm_Chr2g0118061
rosa_laevigata	RLG00000018384 RLG00000018389 RLG00000018397
rosa_multiflora	Rmu_sc0000948.1_g000018 Rmu_sc0000948.1_g000032
rosa_roxburghii	Rroxscaffold_2G00125870 Rroxscaffold_2G00126000 Rroxscaffold_2G00126080 Rroxscaffold_5G00352100
rosa_rugosa	Rorug02G0215100 Rorug02G0215200 Rorug02G0215500.1 Rorug02G0217000
rosa_samantha	Rh2BG283700 Rh2DG280600 Rh2DG298000 Rh2DG298700
rosa_wichuraiana	Rw2G021480 Rw2G021530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	189, 875
AccB7I	CCANNNNNTGG	2 cut(s)	352, 1538
AccBSI	CCGCTC	1 cut(s)	1772
AccI	GTMKAC	2 cut(s)	46, 1647
AccII	CGCG	1 cut(s)	145
AciI	CCGC	7 cut(s)	102, 143, 145, 305, 1148, 1643, 1770
AclWI	GGATC	5 cut(s)	420, 933, 942, 1181, 1313
AcoI	YGGCCR	2 cut(s)	528, 1353
AcsI	RAATTY	3 cut(s)	232, 372, 851
AcuI	CTGAAG	1 cut(s)	551
AcyI	GRCGYC	1 cut(s)	190
AfaI	GTAC	4 cut(s)	159, 1141, 1332, 1808
AfiI	CCNNNNNNNGG	4 cut(s)	186, 352, 800, 1538
AgeI	ACCGGT	1 cut(s)	1760
AjnI	CCWGG	2 cut(s)	610, 904
AloI	GAACNNNNNNTCC	2 cut(s)	829, 861
AluBI	AGCT	9 cut(s)	8, 282, 545, 785, 1034, 1095, 1137, 1160, 1211
AluI	AGCT	9 cut(s)	8, 282, 545, 785, 1034, 1095, 1137, 1160, 1211
Alw21I	GWGCWC	2 cut(s)	295, 1468
Alw26I	GTCTC	5 cut(s)	32, 502, 837, 1586, 1711
AlwI	GGATC	5 cut(s)	420, 933, 942, 1181, 1313
AoxI	GGCC	5 cut(s)	528, 679, 1300, 1353, 1428
ApeKI	GCWGC	2 cut(s)	5, 1160
ApoI	RAATTY	3 cut(s)	232, 372, 851
AsiGI	ACCGGT	1 cut(s)	1760
AspLEI	GCGC	2 cut(s)	192, 904
AspS9I	GGNCC	3 cut(s)	670, 959, 1428
AsuII	TTCGAA	1 cut(s)	848
AvaII	GGWCC	2 cut(s)	670, 959
BalI	TGGCCA	2 cut(s)	530, 1355
BanI	GGYRCC	2 cut(s)	189, 875
BarI	GAAGNNNNNNTAC	2 cut(s)	1083, 1115
Bbv12I	GWGCWC	2 cut(s)	295, 1468
BbvI	GCAGC	2 cut(s)	17, 1147
BccI	CCATC	5 cut(s)	295, 316, 671, 1292, 1532
BciT130I	CCWGG	2 cut(s)	612, 906
BcoDI	GTCTC	5 cut(s)	32, 502, 837, 1586, 1711
BfaI	CTAG	3 cut(s)	210, 888, 1469
BfmI	CTRYAG	2 cut(s)	460, 1203
BfoI	RGCGCY	1 cut(s)	193
BglII	AGATCT	1 cut(s)	1752
BisI	GCNGC	4 cut(s)	6, 102, 146, 1161
BlsI	GCNGC	4 cut(s)	7, 103, 147, 1162
BmcAI	AGTACT	1 cut(s)	1808
Bme1390I	CCNGG	2 cut(s)	612, 906
Bme18I	GGWCC	2 cut(s)	670, 959
BmgT120I	GGNCC	3 cut(s)	670, 959, 1428
BmiI	GGNNCC	7 cut(s)	191, 207, 709, 877, 1279, 1429, 1696
BmrFI	CCNGG	2 cut(s)	612, 906
BmsI	GCATC	2 cut(s)	1600, 1630
BpmI	CTGGAG	2 cut(s)	279, 726
Bpu10I	CCTNAGC	1 cut(s)	149
Bpu14I	TTCGAA	1 cut(s)	848
BpuEI	CTTGAG	2 cut(s)	428, 771
BsaBI	GATNNNNATC	1 cut(s)	1524
BsaHI	GRCGYC	1 cut(s)	190
BsaJI	CCNNGG	3 cut(s)	143, 237, 531
BsaWI	WCCGGW	2 cut(s)	166, 1760
BsaXI	ACNNNNNCTCC	6 cut(s)	22, 52, 1050, 1080, 1222, 1252
Bsc4I	CCNNNNNNNGG	4 cut(s)	186, 352, 800, 1538
Bse118I	RCCGGY	2 cut(s)	192, 1760
Bse1I	ACTGG	5 cut(s)	296, 709, 1356, 1635, 1793
Bse3DI	GCAATG	4 cut(s)	220, 744, 1163, 1175
Bse8I	GATNNNNATC	1 cut(s)	1524
BseBI	CCWGG	2 cut(s)	612, 906
BseDI	CCNNGG	3 cut(s)	143, 237, 531
BseGI	GGATG	4 cut(s)	520, 1112, 1303, 1615
BseJI	GATNNNNATC	1 cut(s)	1524
BseLI	CCNNNNNNNGG	4 cut(s)	186, 352, 800, 1538
BseMI	GCAATG	4 cut(s)	220, 744, 1163, 1175
BseMII	CTCAG	1 cut(s)	1722
BseNI	ACTGG	5 cut(s)	296, 709, 1356, 1635, 1793
BseRI	GAGGAG	3 cut(s)	30, 429, 1604
BseXI	GCAGC	2 cut(s)	17, 1147
BsgI	GTGCAG	1 cut(s)	378
Bsh1236I	CGCG	1 cut(s)	145
BshFI	GGCC	5 cut(s)	530, 681, 1302, 1355, 1430
BshNI	GGYRCC	2 cut(s)	189, 875
BshTI	ACCGGT	1 cut(s)	1760
BsiHKAI	GWGCWC	2 cut(s)	295, 1468
BsiSI	CCGG	3 cut(s)	167, 193, 1761
BslFI	GGGAC	1 cut(s)	124
BslI	CCNNNNNNNGG	4 cut(s)	186, 352, 800, 1538
BsmAI	GTCTC	5 cut(s)	32, 502, 837, 1586, 1711
BsmBI	CGTCTC	2 cut(s)	32, 502
BsmFI	GGGAC	1 cut(s)	124
BsnI	GGCC	5 cut(s)	530, 681, 1302, 1355, 1430
Bsp119I	TTCGAA	1 cut(s)	848
Bsp1286I	GDGCHC	2 cut(s)	295, 1468
Bsp1407I	TGTACA	1 cut(s)	1139
Bsp19I	CCATGG	1 cut(s)	531
BspACI	CCGC	7 cut(s)	102, 143, 145, 305, 1148, 1643, 1770
BspANI	GGCC	5 cut(s)	530, 681, 1302, 1355, 1430
BspCNI	CTCAG	1 cut(s)	1721
BspFNI	CGCG	1 cut(s)	145
BspHI	TCATGA	1 cut(s)	259
BspLI	GGNNCC	7 cut(s)	191, 207, 709, 877, 1279, 1429, 1696
BspPI	GGATC	5 cut(s)	420, 933, 942, 1181, 1313
BspT104I	TTCGAA	1 cut(s)	848
BspT107I	GGYRCC	2 cut(s)	189, 875
BsrBI	CCGCTC	1 cut(s)	1772
BsrDI	GCAATG	4 cut(s)	220, 744, 1163, 1175
BsrFI	RCCGGY	2 cut(s)	192, 1760
BsrGI	TGTACA	1 cut(s)	1139
BsrI	ACTGG	5 cut(s)	296, 709, 1356, 1635, 1793
BssAI	RCCGGY	2 cut(s)	192, 1760
BssECI	CCNNGG	3 cut(s)	143, 237, 531
BssNAI	GTATAC	1 cut(s)	1648
BssNI	GRCGYC	1 cut(s)	190
BssT1I	CCWWGG	1 cut(s)	531
Bst1107I	GTATAC	1 cut(s)	1648
Bst2UI	CCWGG	2 cut(s)	612, 906
Bst4CI	ACNGT	4 cut(s)	162, 1366, 1671, 1705
BstACI	GRCGYC	1 cut(s)	190
BstAPI	GCANNNNNTGC	1 cut(s)	755
BstAUI	TGTACA	1 cut(s)	1139
BstBI	TTCGAA	1 cut(s)	848
BstC8I	GCNNGC	5 cut(s)	194, 760, 992, 1393, 1734
BstDEI	CTNAG	5 cut(s)	149, 880, 1226, 1605, 1708
BstDSI	CCRYGG	3 cut(s)	143, 237, 531
BstF5I	GGATG	4 cut(s)	520, 1112, 1303, 1615
BstFNI	CGCG	1 cut(s)	145
BstH2I	RGCGCY	1 cut(s)	193
BstHHI	GCGC	2 cut(s)	192, 904
BstMAI	GTCTC	5 cut(s)	32, 502, 837, 1586, 1711
BstMWI	GCNNNNNNNGC	6 cut(s)	198, 734, 755, 1388, 1397, 1412
BstNI	CCWGG	2 cut(s)	612, 906
BstNSI	RCATGY	1 cut(s)	766
BstSCI	CCNGG	2 cut(s)	610, 904
BstSFI	CTRYAG	2 cut(s)	460, 1203
BstUI	CGCG	1 cut(s)	145
BstV1I	GCAGC	2 cut(s)	17, 1147
BstX2I	RGATCY	4 cut(s)	412, 925, 934, 1752
BstXI	CCANNNNNNTGG	2 cut(s)	244, 538
BstYI	RGATCY	4 cut(s)	412, 925, 934, 1752
BstZ17I	GTATAC	1 cut(s)	1648
BsuRI	GGCC	5 cut(s)	530, 681, 1302, 1355, 1430
BtgI	CCRYGG	3 cut(s)	143, 237, 531
BtgZI	GCGATG	1 cut(s)	621
BtsCI	GGATG	4 cut(s)	520, 1112, 1303, 1615
BtsI	GCAGTG	1 cut(s)	1333
BtsIMutI	CAGTG	4 cut(s)	303, 1333, 1371, 1628
Cac8I	GCNNGC	5 cut(s)	194, 760, 992, 1393, 1734
CciI	TCATGA	1 cut(s)	259
CfoI	GCGC	2 cut(s)	192, 904
Cfr10I	RCCGGY	2 cut(s)	192, 1760
Cfr13I	GGNCC	3 cut(s)	670, 959, 1428
Cfr42I	CCGCGG	1 cut(s)	146
Csp6I	GTAC	4 cut(s)	158, 1140, 1331, 1807
CspAI	ACCGGT	1 cut(s)	1760
CviAII	CATG	6 cut(s)	202, 260, 347, 532, 763, 1543
CviQI	GTAC	4 cut(s)	158, 1140, 1331, 1807
DdeI	CTNAG	5 cut(s)	149, 880, 1226, 1605, 1708
DinI	GGCGCC	1 cut(s)	191
EaeI	YGGCCR	2 cut(s)	528, 1353
EciI	GGCGGA	1 cut(s)	320
Eco130I	CCWWGG	1 cut(s)	531
Eco32I	GATATC	1 cut(s)	265
Eco47I	GGWCC	2 cut(s)	670, 959
Eco57I	CTGAAG	1 cut(s)	551
EcoO109I	RGGNCCY	1 cut(s)	670
EcoRII	CCWGG	2 cut(s)	610, 904
EcoRV	GATATC	1 cut(s)	265
EcoT14I	CCWWGG	1 cut(s)	531
EcoT22I	ATGCAT	1 cut(s)	1615
EgeI	GGCGCC	1 cut(s)	191
EheI	GGCGCC	1 cut(s)	191
ErhI	CCWWGG	1 cut(s)	531
Esp3I	CGTCTC	2 cut(s)	32, 502
FaeI	CATG	6 cut(s)	205, 263, 350, 535, 766, 1546
FaqI	GGGAC	1 cut(s)	124
FatI	CATG	6 cut(s)	201, 259, 346, 531, 762, 1542
FauI	CCCGC	2 cut(s)	150, 1777
FblI	GTMKAC	2 cut(s)	46, 1647
Fnu4HI	GCNGC	4 cut(s)	6, 102, 146, 1161
FokI	GGATG	4 cut(s)	527, 1099, 1310, 1622
Fsp4HI	GCNGC	4 cut(s)	6, 102, 146, 1161
FspBI	CTAG	3 cut(s)	210, 888, 1469
GlaI	GCGC	2 cut(s)	191, 903
GluI	GCNGC	4 cut(s)	6, 102, 146, 1161
GsuI	CTGGAG	2 cut(s)	279, 726
HaeII	RGCGCY	1 cut(s)	193
HaeIII	GGCC	5 cut(s)	530, 681, 1302, 1355, 1430
HapII	CCGG	3 cut(s)	167, 193, 1761
HhaI	GCGC	2 cut(s)	192, 904
Hin1I	GRCGYC	1 cut(s)	190
Hin1II	CATG	6 cut(s)	205, 263, 350, 535, 766, 1546
Hin6I	GCGC	2 cut(s)	190, 902
HinP1I	GCGC	2 cut(s)	190, 902
HincII	GTYRAC	1 cut(s)	911
HindII	GTYRAC	1 cut(s)	911
HindIII	AAGCTT	2 cut(s)	1032, 1093
HinfI	GANTC	8 cut(s)	131, 274, 308, 838, 884, 1131, 1594, 1659
HpaII	CCGG	3 cut(s)	167, 193, 1761
Hpy188I	TCNGA	9 cut(s)	181, 254, 279, 651, 837, 1120, 1509, 1656, 1717
Hpy188III	TCNNGA	4 cut(s)	260, 268, 407, 962
Hpy99I	CGWCG	1 cut(s)	83
HpyAV	CCTTC	4 cut(s)	470, 485, 669, 1344
HpyCH4III	ACNGT	4 cut(s)	162, 1366, 1671, 1705
HpyCH4V	TGCA	9 cut(s)	359, 689, 749, 1163, 1168, 1415, 1576, 1613, 1628
HpyF10VI	GCNNNNNNNGC	6 cut(s)	198, 734, 755, 1388, 1397, 1412
HpyF3I	CTNAG	5 cut(s)	149, 880, 1226, 1605, 1708
Hsp92I	GRCGYC	1 cut(s)	190
Hsp92II	CATG	6 cut(s)	205, 263, 350, 535, 766, 1546
HspAI	GCGC	2 cut(s)	190, 902
KasI	GGCGCC	1 cut(s)	189
KroI	GCCGGC	1 cut(s)	192
KroNI	GCCGGC	1 cut(s)	194
KspI	CCGCGG	1 cut(s)	146
LmnI	GCTCC	7 cut(s)	298, 542, 707, 1208, 1388, 1694, 1777
Lsp1109I	GCAGC	2 cut(s)	17, 1147
LweI	GCATC	2 cut(s)	1600, 1630
MaeI	CTAG	3 cut(s)	210, 888, 1469
MaeIII	GTNAC	2 cut(s)	1238, 1256
MbiI	CCGCTC	1 cut(s)	1772
MfeI	CAATTG	1 cut(s)	798
MflI	RGATCY	4 cut(s)	412, 925, 934, 1752
MhlI	GDGCHC	2 cut(s)	295, 1468
MlsI	TGGCCA	2 cut(s)	530, 1355
MluNI	TGGCCA	2 cut(s)	530, 1355
Mly113I	GGCGCC	1 cut(s)	190
MlyI	GAGTC	1 cut(s)	1588
MmeI	TCCRAC	1 cut(s)	912
Mox20I	TGGCCA	2 cut(s)	530, 1355
Mph1103I	ATGCAT	1 cut(s)	1615
MreI	CGCCGGCG	1 cut(s)	192
MroNI	GCCGGC	1 cut(s)	192
MscI	TGGCCA	2 cut(s)	530, 1355
MseI	TTAA	3 cut(s)	429, 720, 1053
MslI	CAYNNNNRTG	2 cut(s)	242, 1168
Msp20I	TGGCCA	2 cut(s)	530, 1355
MspA1I	CMGCKG	2 cut(s)	145, 1137
MspI	CCGG	3 cut(s)	167, 193, 1761
MspR9I	CCNGG	2 cut(s)	612, 906
MunI	CAATTG	1 cut(s)	798
MvaI	CCWGG	2 cut(s)	612, 906
MvnI	CGCG	1 cut(s)	145
MwoI	GCNNNNNNNGC	6 cut(s)	198, 734, 755, 1388, 1397, 1412
NaeI	GCCGGC	1 cut(s)	194
NarI	GGCGCC	1 cut(s)	190
NcoI	CCATGG	1 cut(s)	531
NgoMIV	GCCGGC	1 cut(s)	192
NlaIII	CATG	6 cut(s)	205, 263, 350, 535, 766, 1546
NlaIV	GGNNCC	7 cut(s)	191, 207, 709, 877, 1279, 1429, 1696
NmuCI	GTSAC	1 cut(s)	1238
NsiI	ATGCAT	1 cut(s)	1615
NspI	RCATGY	1 cut(s)	766
NspV	TTCGAA	1 cut(s)	848
PagI	TCATGA	1 cut(s)	259
PdiI	GCCGGC	1 cut(s)	194
PfeI	GAWTC	7 cut(s)	131, 274, 308, 838, 884, 1131, 1659
PflMI	CCANNNNNTGG	2 cut(s)	352, 1538
PinAI	ACCGGT	1 cut(s)	1760
PkrI	GCNGC	4 cut(s)	7, 103, 147, 1162
PleI	GAGTC	1 cut(s)	1588
PluTI	GGCGCC	1 cut(s)	193
PpsI	GAGTC	1 cut(s)	1588
PpuMI	RGGWCCY	1 cut(s)	670
Psp5II	RGGWCCY	1 cut(s)	670
Psp6I	CCWGG	2 cut(s)	610, 904
PspGI	CCWGG	2 cut(s)	610, 904
PspN4I	GGNNCC	7 cut(s)	191, 207, 709, 877, 1279, 1429, 1696
PspPI	GGNCC	3 cut(s)	670, 959, 1428
PspPPI	RGGWCCY	1 cut(s)	670
PsuI	RGATCY	4 cut(s)	412, 925, 934, 1752
PvuII	CAGCTG	1 cut(s)	1137
RsaI	GTAC	4 cut(s)	159, 1141, 1332, 1808
RsaNI	GTAC	4 cut(s)	158, 1140, 1331, 1807
RseI	CAYNNNNRTG	2 cut(s)	242, 1168
SacII	CCGCGG	1 cut(s)	146
SaqAI	TTAA	3 cut(s)	429, 720, 1053
SatI	GCNGC	4 cut(s)	6, 102, 146, 1161
Sau96I	GGNCC	3 cut(s)	670, 959, 1428
ScaI	AGTACT	1 cut(s)	1808
SchI	GAGTC	1 cut(s)	1588
ScrFI	CCNGG	2 cut(s)	612, 906
SduI	GDGCHC	2 cut(s)	295, 1468
SfaNI	GCATC	2 cut(s)	1600, 1630
SfcI	CTRYAG	2 cut(s)	460, 1203
SfoI	GGCGCC	1 cut(s)	191
Sfr303I	CCGCGG	1 cut(s)	146
SfuI	TTCGAA	1 cut(s)	848
SgrAI	CRCCGGYG	1 cut(s)	192
SgrBI	CCGCGG	1 cut(s)	146
SinI	GGWCC	2 cut(s)	670, 959
SmiMI	CAYNNNNRTG	2 cut(s)	242, 1168
SmlI	CTYRAG	2 cut(s)	407, 786
SmoI	CTYRAG	2 cut(s)	407, 786
SsiI	CCGC	7 cut(s)	102, 143, 145, 305, 1148, 1643, 1770
SspDI	GGCGCC	1 cut(s)	189
SspMI	CTAG	3 cut(s)	210, 888, 1469
StyD4I	CCNGG	2 cut(s)	610, 904
StyI	CCWWGG	1 cut(s)	531
TaaI	ACNGT	4 cut(s)	162, 1366, 1671, 1705
TaqI	TCGA	3 cut(s)	376, 848, 1450
TatI	WGTACW	2 cut(s)	1139, 1806
TauI	GCSGC	2 cut(s)	104, 148
TfiI	GAWTC	7 cut(s)	131, 274, 308, 838, 884, 1131, 1659
Tru1I	TTAA	3 cut(s)	429, 720, 1053
Tru9I	TTAA	3 cut(s)	429, 720, 1053
TscAI	CASTG	4 cut(s)	303, 1333, 1371, 1635
TseFI	GTSAC	1 cut(s)	1238
TseI	GCWGC	2 cut(s)	5, 1160
Tsp45I	GTSAC	1 cut(s)	1238
TspDTI	ATGAA	6 cut(s)	363, 504, 513, 574, 624, 1194
TspGWI	ACGGA	5 cut(s)	67, 80, 254, 615, 1257
TspRI	CASTG	4 cut(s)	303, 1333, 1371, 1635
Van91I	CCANNNNNTGG	2 cut(s)	352, 1538
VpaK11BI	GGWCC	2 cut(s)	670, 959
XapI	RAATTY	3 cut(s)	232, 372, 851
XceI	RCATGY	1 cut(s)	766
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1363
XmiI	GTMKAC	2 cut(s)	46, 1647
XspI	CTAG	3 cut(s)	210, 888, 1469
ZrmI	AGTACT	1 cut(s)	1808
Zsp2I	ATGCAT	1 cut(s)	1615

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.