Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0002493

Physical Location & Seq

Genomic Coordinates Forward (+)

30398179 .. 30404747

Gene Structure 6569 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ49092

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1545 bp

ATGATGGGGACTTCAACACTAGTTTGCGCTCCGATAACGGCGGAAACGGTTCGCAAGATGGTGAGCGATATGGGCAAGGCAGCAGCCCTTGGTGCTGATCTAGTGGAGATTAGATTGGATTATTTGAAGGTCTTCAATAGCAATGAAGATCTTAAGACCCTAATTAAAGAATCCCCTTCGCCAACTCTTTTCACTTATAGACCAAAGTGGCAAGGTGGTCAGTATGATGGTGATGAAAAACATCGACTGGATGCTCTTCGATTAGCGATGGAGCTTGGAGCTGATTACATTGATGTCGAGTTTCAGGTTGCTCATGAATTCATCGACTCCATATATGGAAAGAAGCCTGACAAGTTTAAAGTTATTGTTTCTTCCCACAACTATCAAGATACTCCATCTGTCGAGGATCTCGGAGATCTTGTTGCTAGAATGCAAGCCACTGGAGCTGACATAGTCAGCATCACAACCACTGCCTTGGATATTACTGACGTAGCACGCATTTTTCAGATAACTGTGCATTCTCAAGTCCCAGTAATAGGACTTGCAATGGGTGAGAGGGGCTTGATTTCTCGGATACTCTGCGCAAAATTTGGTGGTTACCTTACTTCTGGTACACTCGATTCAGGAATTGTTTCAGTTCCTGGAGAACCTGCCATCAAGGATATATTACATGTATACAACTTCAGACTGATAAGACCTGGTACAAAACTGTTTGGTGTTATTGGAAAGCCTATCAGCCACAGCAAATCTCCTCTTCTCTACAATGAAGGATTCAAGTCAGTAGGTTTCGATGGAGTTTATCTACATCTTTTGGTAGATGACATTGCAAATTTTCTCCGTACTTACTCATCAACTGACTTTTCTGGATTCAGCGTTGGGATTCCTCACAAGGAAGCTGCAGTAAAGTGCTGTGATGAGGTTGATCCAGTTGCCAAGTCAATAGGAGCTGTTAACTGCATTGTAAGGAGGCCAACTGATGGGAAGTTATTTGGCTTAAATACTGACTATTTTGGGTCTATTTCTGCTATCGAGGATGGACTTCGAGGTTCACATGATAGAGACAATACCACTGGTTCACCTTTAGCTGGTAGGTTGTTTGTTGTCATGGGTGCCGGAGGTGCTGGAAAGGCGCTTGCTTATGGTGCAAAGCAGAAGGGAGCTAGAATTGTTATTGCCAACCGCAAATATGATCGAGCCAGAAAACTTGCAGACGAAGTTGGAGGAGATGCTTTGTCTTTTGCTGAATTAGAAAATTTCCACCCAGAGGACGGCATGGTTCTTGCAAATGCAACATCTGTCGGAATGCAACCGAATATTGATGAGACACCTATTCCTAAGCATGCTCTGAGATCATATTCGTTGGTGTTTGATGCCGTTTACAACCCCAAAATGACTAGACTTTTGAGCGAAGCTGCGGAGTCCAGTGTCACAGTTGTTAGTGGGGTTGAGATGCTCATTGGACAGGCATATGAACAGTTTGAGAGGTTCACCGGATTGCCTGCACCAAAGGAACTGTTTAGGAAAGTTATGGAAAATTGCCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004764 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009423 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0016053 GO:0016491 GO:0016614 GO:0016616 GO:0019632 GO:0019752 GO:0022414 GO:0032501 GO:0032502 GO:0032787 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043648 GO:0043650 GO:0044237 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046417 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0055114 GO:0061458 GO:0071704 GO:1901576 GO:1901615

KEGG Pathways

Metabolic & Signaling

ko00400 ko01100 ko01110 ko01130 ko01230 map00400 map01100 map01110 map01130 map01230

Pfam Domains

Protein Families

DHquinase_I Shikimate_DH Shikimate_dh_N

Protein Analysis

514

Amino Acids

55.81

Weight (kDa)

5.83

Isoelectric Point (pI)

22.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DHquinase_I	PF01487	9 - 226	2e-63	Type I 3-dehydroquinase
Shikimate_dh_N	PF08501	240 - 320	6.2e-25	Shikimate dehydrogenase substrate binding domain
Shikimate_DH	PF01488	362 - 419	1.6e-06	Shikimate / quinate 5-dehydrogenase
SDH_C	PF18317	481 - 510	3.4e-10	Shikimate 5'-dehydrogenase C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002493)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06350
fragaria_vesca	FvH4_1g23213 FvH4_1g23213 FvH4_1g23213 FvH4_1g23232 FvH4_1g23232 FvH4_1g23232
malus_domestica	MD00G1130500.v1.1 MD15G1335600.v1.1
prunus_persica	Prupe.6G166100_v2.0.a1 Prupe.6G166100_v2.0.a1 Prupe.6G166100_v2.0.a1 Prupe.6G166200_v2.0.a1 Prupe.6G166200_v2.0.a1 Prupe.6G166200_v2.0.a1 Prupe.6G166200_v2.0.a1 Prupe.6G166200_v2.0.a1
pyrus_communis	pycom01g04680 pycom01g04700 pycom15g28990
rosa_chinensis	RchiOBHm_Chr2g0117991 RchiOBHm_Chr2g0118061
rosa_laevigata	RLG00000018384 RLG00000018389 RLG00000018397
rosa_multiflora	Rmu_sc0000948.1_g000018 Rmu_sc0000948.1_g000032
rosa_roxburghii	Rroxscaffold_2G00125870 Rroxscaffold_2G00126000 Rroxscaffold_2G00126080 Rroxscaffold_5G00352100
rosa_rugosa	Rorug02G0215100 Rorug02G0215200 Rorug02G0215500.1 Rorug02G0217000
rosa_samantha	Rh2BG283700 Rh2DG280600 Rh2DG298000 Rh2DG298700
rosa_wichuraiana	Rw2G021480 Rw2G021530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	583
Acc36I	ACCTGC	1 cut(s)	658
AccB1I	GGYRCC	1 cut(s)	1109
AccB7I	CCANNNNNTGG	1 cut(s)	977
AccI	GTMKAC	1 cut(s)	675
AciI	CCGC	3 cut(s)	41, 1180, 1415
AclWI	GGATC	2 cut(s)	414, 917
AcsI	RAATTY	4 cut(s)	317, 587, 829, 1252
AcuI	CTGAAG	1 cut(s)	667
AfaI	GTAC	3 cut(s)	613, 703, 841
AfiI	CCNNNNNNNGG	5 cut(s)	536, 977, 1085, 1264, 1268
AflII	CTTAAG	1 cut(s)	152
AflIII	ACRYGT	1 cut(s)	670
AgsI	TTSAA	4 cut(s)	15, 127, 136, 775
AhlI	ACTAGT	1 cut(s)	19
AjnI	CCWGG	2 cut(s)	640, 697
AluBI	AGCT	8 cut(s)	274, 281, 446, 896, 947, 1085, 1160, 1412
AluI	AGCT	8 cut(s)	274, 281, 446, 896, 947, 1085, 1160, 1412
Alw26I	GTCTC	2 cut(s)	1053, 1316
AlwI	GGATC	2 cut(s)	414, 917
AlwNI	CAGNNNCTG	1 cut(s)	641
AoxI	GGCC	1 cut(s)	968
ApeKI	GCWGC	4 cut(s)	80, 83, 896, 1412
ApoI	RAATTY	4 cut(s)	317, 587, 829, 1252
ArsI	GACNNNNNNTTYG	2 cut(s)	1384, 1416
Asp700I	GAANNNNTTC	3 cut(s)	48, 131, 631
AspLEI	GCGC	3 cut(s)	29, 584, 1132
AsuHPI	GGTGA	5 cut(s)	73, 242, 563, 1068, 1480
BanI	GGYRCC	1 cut(s)	1109
BbsI	GAAGAC	1 cut(s)	124
BbvI	GCAGC	4 cut(s)	92, 95, 883, 1399
BccI	CCATC	8 cut(s)	52, 221, 262, 403, 662, 785, 971, 1028
BceAI	ACGGC	3 cut(s)	54, 1285, 1358
BciT130I	CCWGG	2 cut(s)	642, 699
BciVI	GTATCC	1 cut(s)	567
BcoDI	GTCTC	2 cut(s)	1053, 1316
BcuI	ACTAGT	1 cut(s)	19
BfaI	CTAG	5 cut(s)	20, 101, 426, 1161, 1395
BfmI	CTRYAG	1 cut(s)	897
BfoI	RGCGCY	1 cut(s)	1133
BfrI	CTTAAG	1 cut(s)	152
BfuAI	ACCTGC	1 cut(s)	658
BfuI	GTATCC	1 cut(s)	567
BglII	AGATCT	2 cut(s)	148, 415
BisI	GCNGC	4 cut(s)	81, 84, 897, 1413
BlsI	GCNGC	4 cut(s)	82, 85, 898, 1414
Bme1390I	CCNGG	2 cut(s)	642, 699
BmiI	GGNNCC	1 cut(s)	1111
BmrFI	CCNGG	2 cut(s)	642, 699
BmrI	ACTGGG	1 cut(s)	524
BmsI	GCATC	5 cut(s)	241, 468, 1216, 1360, 1440
BmuI	ACTGGG	1 cut(s)	524
BpiI	GAAGAC	1 cut(s)	124
BpmI	CTGGAG	2 cut(s)	462, 663
Bpu10I	CCTNAGC	1 cut(s)	1335
BpuEI	CTTGAG	1 cut(s)	507
BsaJI	CCNNGG	2 cut(s)	88, 474
BsaWI	WCCGGW	1 cut(s)	1490
BsaXI	ACNNNNNCTCC	2 cut(s)	405, 435
Bsc4I	CCNNNNNNNGG	5 cut(s)	536, 977, 1085, 1264, 1268
Bse1I	ACTGG	6 cut(s)	252, 445, 530, 926, 1075, 1422
Bse3DI	GCAATG	3 cut(s)	148, 552, 822
BseBI	CCWGG	2 cut(s)	642, 699
BseDI	CCNNGG	2 cut(s)	88, 474
BseGI	GGATG	2 cut(s)	256, 1039
BseLI	CCNNNNNNNGG	5 cut(s)	536, 977, 1085, 1264, 1268
BseMI	GCAATG	3 cut(s)	148, 552, 822
BseMII	CTCAG	1 cut(s)	1337
BseNI	ACTGG	6 cut(s)	252, 445, 530, 926, 1075, 1422
BseRI	GAGGAG	2 cut(s)	741, 1236
BseXI	GCAGC	4 cut(s)	92, 95, 883, 1399
BsgI	GTGCAG	1 cut(s)	1485
BshFI	GGCC	1 cut(s)	970
BshNI	GGYRCC	1 cut(s)	1109
BsiSI	CCGG	2 cut(s)	1113, 1491
BslFI	GGGAC	2 cut(s)	22, 512
BslI	CCNNNNNNNGG	5 cut(s)	536, 977, 1085, 1264, 1268
BsmAI	GTCTC	2 cut(s)	1053, 1316
BsmFI	GGGAC	2 cut(s)	22, 512
BsmI	GAATGC	3 cut(s)	435, 517, 1308
BsnI	GGCC	1 cut(s)	970
Bsp143I	GATC	7 cut(s)	97, 148, 406, 415, 922, 1189, 1349
BspACI	CCGC	3 cut(s)	41, 1180, 1415
BspANI	GGCC	1 cut(s)	970
BspCNI	CTCAG	1 cut(s)	1338
BspHI	TCATGA	1 cut(s)	313
BspLI	GGNNCC	1 cut(s)	1111
BspMAI	CTGCAG	1 cut(s)	901
BspMI	ACCTGC	1 cut(s)	658
BspPI	GGATC	2 cut(s)	414, 917
BspQI	GCTCTTC	1 cut(s)	261
BspT107I	GGYRCC	1 cut(s)	1109
BspTI	CTTAAG	1 cut(s)	152
BsrDI	GCAATG	3 cut(s)	148, 552, 822
BsrI	ACTGG	6 cut(s)	252, 445, 530, 926, 1075, 1422
BssECI	CCNNGG	2 cut(s)	88, 474
BssMI	GATC	7 cut(s)	97, 148, 406, 415, 922, 1189, 1349
BssNAI	GTATAC	1 cut(s)	676
BssT1I	CCWWGG	2 cut(s)	88, 474
Bst1107I	GTATAC	1 cut(s)	676
Bst2UI	CCWGG	2 cut(s)	642, 699
Bst4CI	ACNGT	6 cut(s)	49, 514, 711, 1432, 1476, 1515
Bst6I	CTCTTC	2 cut(s)	261, 759
BstAFI	CTTAAG	1 cut(s)	152
BstC8I	GCNNGC	5 cut(s)	435, 496, 1134, 1341, 1500
BstDEI	CTNAG	2 cut(s)	1335, 1346
BstEII	GGTNACC	1 cut(s)	596
BstF5I	GGATG	2 cut(s)	256, 1039
BstH2I	RGCGCY	1 cut(s)	1133
BstHHI	GCGC	3 cut(s)	29, 584, 1132
BstKTI	GATC	7 cut(s)	100, 151, 409, 418, 925, 1192, 1352
BstMAI	GTCTC	2 cut(s)	1053, 1316
BstMBI	GATC	7 cut(s)	97, 148, 406, 415, 922, 1189, 1349
BstMWI	GCNNNNNNNGC	6 cut(s)	72, 92, 443, 1118, 1127, 1142
BstNI	CCWGG	2 cut(s)	642, 699
BstNSI	RCATGY	2 cut(s)	674, 1343
BstPI	GGTNACC	1 cut(s)	596
BstSCI	CCNGG	2 cut(s)	640, 697
BstSFI	CTRYAG	1 cut(s)	897
BstV1I	GCAGC	4 cut(s)	92, 95, 883, 1399
BstV2I	GAAGAC	1 cut(s)	124
BstX2I	RGATCY	3 cut(s)	148, 406, 415
BstXI	CCANNNNNNTGG	1 cut(s)	475
BstYI	RGATCY	3 cut(s)	148, 406, 415
BstZ17I	GTATAC	1 cut(s)	676
BsuI	GTATCC	1 cut(s)	567
BsuRI	GGCC	1 cut(s)	970
BtgZI	GCGATG	1 cut(s)	281
BtsCI	GGATG	2 cut(s)	256, 1039
BtsI	GCAGTG	1 cut(s)	468
BtsIMutI	CAGTG	4 cut(s)	438, 468, 1068, 1429
BveI	ACCTGC	1 cut(s)	658
Cac8I	GCNNGC	5 cut(s)	435, 496, 1134, 1341, 1500
CaiI	CAGNNNCTG	1 cut(s)	641
CciI	TCATGA	1 cut(s)	313
CfoI	GCGC	3 cut(s)	29, 584, 1132
CsiI	ACCWGGT	1 cut(s)	697
Csp6I	GTAC	3 cut(s)	612, 702, 840
CviAII	CATG	6 cut(s)	314, 671, 1052, 1105, 1273, 1340
CviQI	GTAC	3 cut(s)	612, 702, 840
DdeI	CTNAG	2 cut(s)	1335, 1346
DpnI	GATC	7 cut(s)	99, 150, 408, 417, 924, 1191, 1351
DpnII	GATC	7 cut(s)	97, 148, 406, 415, 922, 1189, 1349
DraI	TTTAAA	1 cut(s)	358
Eam1104I	CTCTTC	2 cut(s)	261, 759
EarI	CTCTTC	2 cut(s)	261, 759
EciI	GGCGGA	1 cut(s)	56
Eco130I	CCWWGG	2 cut(s)	88, 474
Eco57I	CTGAAG	1 cut(s)	667
Eco91I	GGTNACC	1 cut(s)	596
EcoO65I	GGTNACC	1 cut(s)	596
EcoRI	GAATTC	1 cut(s)	317
EcoRII	CCWGG	2 cut(s)	640, 697
EcoT14I	CCWWGG	2 cut(s)	88, 474
ErhI	CCWWGG	2 cut(s)	88, 474
FaeI	CATG	6 cut(s)	317, 674, 1055, 1108, 1276, 1343
FaqI	GGGAC	2 cut(s)	22, 512
FatI	CATG	6 cut(s)	313, 670, 1051, 1104, 1272, 1339
FauNDI	CATATG	1 cut(s)	1468
FblI	GTMKAC	1 cut(s)	675
Fnu4HI	GCNGC	4 cut(s)	81, 84, 897, 1413
FokI	GGATG	2 cut(s)	263, 1046
Fsp4HI	GCNGC	4 cut(s)	81, 84, 897, 1413
FspBI	CTAG	5 cut(s)	20, 101, 426, 1161, 1395
FspI	TGCGCA	1 cut(s)	583
GlaI	GCGC	3 cut(s)	28, 583, 1131
GluI	GCNGC	4 cut(s)	81, 84, 897, 1413
GsuI	CTGGAG	2 cut(s)	462, 663
HaeII	RGCGCY	1 cut(s)	1133
HaeIII	GGCC	1 cut(s)	970
HapII	CCGG	2 cut(s)	1113, 1491
HhaI	GCGC	3 cut(s)	29, 584, 1132
Hin1II	CATG	6 cut(s)	317, 674, 1055, 1108, 1276, 1343
Hin6I	GCGC	3 cut(s)	27, 582, 1130
HinP1I	GCGC	3 cut(s)	27, 582, 1130
HincII	GTYRAC	1 cut(s)	952
HindII	GTYRAC	1 cut(s)	952
HinfI	GANTC	7 cut(s)	170, 326, 620, 771, 867, 880, 1418
HpaI	GTTAAC	1 cut(s)	952
HpaII	CCGG	2 cut(s)	1113, 1491
HphI	GGTGA	5 cut(s)	73, 242, 563, 1068, 1480
Hpy166II	GTNNAC	7 cut(s)	614, 676, 952, 1049, 1076, 1378, 1488
Hpy188I	TCNGA	7 cut(s)	33, 413, 507, 573, 686, 1301, 1347
Hpy188III	TCNNGA	4 cut(s)	314, 386, 624, 864
Hpy8I	GTNNAC	7 cut(s)	614, 676, 952, 1049, 1076, 1378, 1488
HpyAV	CCTTC	4 cut(s)	121, 186, 761, 1147
HpyCH4III	ACNGT	6 cut(s)	49, 514, 711, 1432, 1476, 1515
HpyCH4IV	ACGT	1 cut(s)	489
HpyF10VI	GCNNNNNNNGC	6 cut(s)	72, 92, 443, 1118, 1127, 1142
HpyF3I	CTNAG	2 cut(s)	1335, 1346
HpySE526I	ACGT	1 cut(s)	489
Hsp92II	CATG	6 cut(s)	317, 674, 1055, 1108, 1276, 1343
HspAI	GCGC	3 cut(s)	27, 582, 1130
KspAI	GTTAAC	1 cut(s)	952
Kzo9I	GATC	7 cut(s)	97, 148, 406, 415, 922, 1189, 1349
LguI	GCTCTTC	1 cut(s)	261
LmnI	GCTCC	6 cut(s)	34, 271, 278, 443, 944, 1157
Lsp1109I	GCAGC	4 cut(s)	92, 95, 883, 1399
LweI	GCATC	5 cut(s)	241, 468, 1216, 1360, 1440
MabI	ACCWGGT	1 cut(s)	697
MaeI	CTAG	5 cut(s)	20, 101, 426, 1161, 1395
MaeII	ACGT	1 cut(s)	489
MaeIII	GTNAC	2 cut(s)	596, 1426
MalI	GATC	7 cut(s)	99, 150, 408, 417, 924, 1191, 1351
MboI	GATC	7 cut(s)	97, 148, 406, 415, 922, 1189, 1349
MboII	GAAGA	5 cut(s)	124, 158, 248, 363, 746
MflI	RGATCY	3 cut(s)	148, 406, 415
MluCI	AATT	9 cut(s)	162, 317, 587, 627, 829, 1164, 1244, 1252, 1534
MlyI	GAGTC	2 cut(s)	320, 1427
MmeI	TCCRAC	2 cut(s)	1198, 1279
MroXI	GAANNNNTTC	3 cut(s)	48, 131, 631
MseI	TTAA	5 cut(s)	153, 165, 357, 951, 995
MspCI	CTTAAG	1 cut(s)	152
MspI	CCGG	2 cut(s)	1113, 1491
MspR9I	CCNGG	2 cut(s)	642, 699
Mva1269I	GAATGC	3 cut(s)	435, 517, 1308
MvaI	CCWGG	2 cut(s)	642, 699
MwoI	GCNNNNNNNGC	6 cut(s)	72, 92, 443, 1118, 1127, 1142
NdeI	CATATG	1 cut(s)	1468
NdeII	GATC	7 cut(s)	97, 148, 406, 415, 922, 1189, 1349
NlaIII	CATG	6 cut(s)	317, 674, 1055, 1108, 1276, 1343
NlaIV	GGNNCC	1 cut(s)	1111
NmuCI	GTSAC	1 cut(s)	1426
NsbI	TGCGCA	1 cut(s)	583
NspI	RCATGY	2 cut(s)	674, 1343
PaeI	GCATGC	1 cut(s)	1343
PagI	TCATGA	1 cut(s)	313
PciI	ACATGT	1 cut(s)	670
PciSI	GCTCTTC	1 cut(s)	261
PctI	GAATGC	3 cut(s)	435, 517, 1308
PdmI	GAANNNNTTC	3 cut(s)	48, 131, 631
PfeI	GAWTC	5 cut(s)	170, 620, 771, 867, 880
PflFI	GACNNNGTC	1 cut(s)	452
PflMI	CCANNNNNTGG	1 cut(s)	977
PfoI	TCCNGGA	1 cut(s)	640
PkrI	GCNGC	4 cut(s)	82, 85, 898, 1414
PleI	GAGTC	2 cut(s)	320, 1426
PpsI	GAGTC	2 cut(s)	320, 1426
PscI	ACATGT	1 cut(s)	670
Psp6I	CCWGG	2 cut(s)	640, 697
PspEI	GGTNACC	1 cut(s)	596
PspGI	CCWGG	2 cut(s)	640, 697
PspN4I	GGNNCC	1 cut(s)	1111
PstI	CTGCAG	1 cut(s)	901
PstNI	CAGNNNCTG	1 cut(s)	641
PsuI	RGATCY	3 cut(s)	148, 406, 415
PsyI	GACNNNGTC	1 cut(s)	452
RsaI	GTAC	3 cut(s)	613, 703, 841
RsaNI	GTAC	3 cut(s)	612, 702, 840
SapI	GCTCTTC	1 cut(s)	261
SaqAI	TTAA	5 cut(s)	153, 165, 357, 951, 995
SatI	GCNGC	4 cut(s)	81, 84, 897, 1413
Sau3AI	GATC	7 cut(s)	97, 148, 406, 415, 922, 1189, 1349
SchI	GAGTC	2 cut(s)	320, 1427
ScrFI	CCNGG	2 cut(s)	642, 699
SexAI	ACCWGGT	1 cut(s)	697
SfaNI	GCATC	5 cut(s)	241, 468, 1216, 1360, 1440
SfcI	CTRYAG	1 cut(s)	897
SmlI	CTYRAG	2 cut(s)	152, 522
SmoI	CTYRAG	2 cut(s)	152, 522
SpeI	ACTAGT	1 cut(s)	19
SphI	GCATGC	1 cut(s)	1343
Sse9I	AATT	9 cut(s)	162, 317, 587, 627, 829, 1164, 1244, 1252, 1534
SsiI	CCGC	3 cut(s)	41, 1180, 1415
SspI	AATATT	1 cut(s)	1315
SspMI	CTAG	5 cut(s)	20, 101, 426, 1161, 1395
StyD4I	CCNGG	2 cut(s)	640, 697
StyI	CCWWGG	2 cut(s)	88, 474
TaaI	ACNGT	6 cut(s)	49, 514, 711, 1432, 1476, 1515
TaiI	ACGT	1 cut(s)	492
TasI	AATT	9 cut(s)	162, 317, 587, 627, 829, 1164, 1244, 1252, 1534
TfiI	GAWTC	5 cut(s)	170, 620, 771, 867, 880
Tru1I	TTAA	5 cut(s)	153, 165, 357, 951, 995
Tru9I	TTAA	5 cut(s)	153, 165, 357, 951, 995
TscAI	CASTG	4 cut(s)	445, 475, 1075, 1429
TseFI	GTSAC	1 cut(s)	1426
TseI	GCWGC	4 cut(s)	80, 83, 896, 1412
Tsp45I	GTSAC	1 cut(s)	1426
TspDTI	ATGAA	6 cut(s)	159, 249, 310, 330, 780, 1485
TspGWI	ACGGA	1 cut(s)	827
TspRI	CASTG	4 cut(s)	445, 475, 1075, 1429
Tth111I	GACNNNGTC	1 cut(s)	452
Van91I	CCANNNNNTGG	1 cut(s)	977
Vha464I	CTTAAG	1 cut(s)	152
XapI	RAATTY	4 cut(s)	317, 587, 829, 1252
XceI	RCATGY	2 cut(s)	674, 1343
XmiI	GTMKAC	1 cut(s)	675
XmnI	GAANNNNTTC	3 cut(s)	48, 131, 631
XspI	CTAG	5 cut(s)	20, 101, 426, 1161, 1395

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.