Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0002493

Physical Location & Seq

Genomic Coordinates Forward (+)

29122339 .. 29127636

Gene Structure 5298 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000018389

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1545 bp

ATGATGGGGAGAACACTAGTTTGCGCTCCGATAACGGCGGAAACGGTTCGCAAGATGGTGAGTGATATGGGCAAGGCAACAGCCCTTGGTGCTGATCTAGTGGAGATTAGATTGGATTATTTGAAGGTCTTCAATAGCAATGAAGATCTTAAGACCCTAATTAAAGAATCCCCTTTGCCATCTCTTTTCACTTATAGACCAAAGTGGCAAGGTGGTCAATATCATGGTGATGAAAAACATCGACTGGATGCTCTTCGATTAGCGATGGAGCTTGGAGCTGATTACATTGATGTCGAGTTTCAGGTTGCTCATGAATTCATCGACTCCATATATGGAAAGAAGCCTGACAAGTTTAAAGTTATTGTTTCTTCCCACAACTATCAAGATACTCCATCTGTCGAGGATCTCGGAGATCTTGTTGCTAGAATGCAAGCCACTGGAGCTGACATAGTCAGCATCACAACCACTGCCTTGGACATTACTGACGTAGCTCGCATTTTTCAGATAACTGTGCATTCTCAAGTCCCAGTAATAGGACTTGCAATGGGTGAGAGGGGCTTGATTTCTCGGATACTCTGCGCAAAATTTGGTGGTTACCTTACTTCTGGTACACTCGGTTCAGGAATTGTTTCAGTTCCTGGAGAACCTGCCATCAAGGATATATTACATGTATACAACTTCAGACTGATAAGACCTGGTACAAAACTGTTTGGTGTTATTGGAAAGCCTATCAGCCACAGCAAATCTCCTCTTCTCTACAATGAAGGATTCAAGTCAGTAGGTTTCGATGGAGTTTATCTACATCTTTTGGTAGATGACATTGCAAATTTTCTCCTTACCTACTCATCAACTGACTTTTCTGGATTCAGCGTTGGAATTCCTCACAAGGAAGCTGCAGTTAAGTGCTGTGATGAGGTGGATCCAGTTGCCAAGTCAATAGGAGCTGTTAACTGCATTGTAAGGAGGCCAACTGATGGGAAGTTATTTGGCTTAAATACTGACTATTTTGGGTCTATTTCTGCTATCGAGGATGGACTTCGAGGTTCACATGATAGAGGCAATAATACCACTGGTTCACCTTTAGCTGGTAGGTTGTTTGTTGTCATGGGTGCCGGAGGTGCTGGAAAGGCGCTTGCTTATGGTGCAAAGCAGAAGGGAGCTAGAATTGTTATTGCCAACCGCAAATATGATCGAGCCAGAAAACTTGCAGACGAAGTTGGAGGAGATGCTTTGTCTTTTGCTGAATTAGAAAATTTCCACCCAGAGGACGGCACGGTTCTTGCAAATGCAACATCTGTCGGAATGCAACCGAATATTGATGAGACACCTATTCCTAAGCATGCTCTGAGATCATATTCGTTGGTGTTTGATGCCGTTTACAACCCCAAAATGACTAGACTTTTGAGCGAAGCTGCGGAGTCTGGTGTCACAGTTGTTAGCGGGGTTGAGATGCTCATTGGACAGGCATATGAACAGTTTGAGATGTTCACCGGATTGCCTGCACCAAAGGAACTGTTTAGGAAAGTTATGGAAAATTGCCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004764 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009423 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0016053 GO:0016491 GO:0016614 GO:0016616 GO:0019632 GO:0019752 GO:0022414 GO:0032501 GO:0032502 GO:0032787 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043648 GO:0043650 GO:0044237 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046417 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0055114 GO:0061458 GO:0071704 GO:1901576 GO:1901615

KEGG Pathways

Metabolic & Signaling

ko00400 ko01100 ko01110 ko01130 ko01230 map00400 map01100 map01110 map01130 map01230

Pfam Domains

Protein Families

DHquinase_I Shikimate_DH Shikimate_dh_N

Protein Analysis

515

Amino Acids

55.71

Weight (kDa)

6.09

Isoelectric Point (pI)

20.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DHquinase_I	PF01487	8 - 225	5.7e-63	Type I 3-dehydroquinase
Shikimate_dh_N	PF08501	239 - 319	2.5e-24	Shikimate dehydrogenase substrate binding domain
Shikimate_DH	PF01488	361 - 418	1.8e-06	Shikimate / quinate 5-dehydrogenase
SDH_C	PF18317	481 - 510	4.3e-10	Shikimate 5'-dehydrogenase C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002493)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06350
fragaria_vesca	FvH4_1g23213 FvH4_1g23213 FvH4_1g23213 FvH4_1g23232 FvH4_1g23232 FvH4_1g23232
malus_domestica	MD00G1130500.v1.1 MD15G1335600.v1.1
prunus_persica	Prupe.6G166100_v2.0.a1 Prupe.6G166100_v2.0.a1 Prupe.6G166100_v2.0.a1 Prupe.6G166200_v2.0.a1 Prupe.6G166200_v2.0.a1 Prupe.6G166200_v2.0.a1 Prupe.6G166200_v2.0.a1 Prupe.6G166200_v2.0.a1
pyrus_communis	pycom01g04680 pycom01g04700 pycom15g28990
rosa_chinensis	RchiOBHm_Chr2g0117991 RchiOBHm_Chr2g0118061
rosa_laevigata	RLG00000018384 RLG00000018389 RLG00000018397
rosa_multiflora	Rmu_sc0000948.1_g000018 Rmu_sc0000948.1_g000032
rosa_roxburghii	Rroxscaffold_2G00125870 Rroxscaffold_2G00126000 Rroxscaffold_2G00126080 Rroxscaffold_5G00352100
rosa_rugosa	Rorug02G0215100 Rorug02G0215200 Rorug02G0215500.1 Rorug02G0217000
rosa_samantha	Rh2BG283700 Rh2DG280600 Rh2DG298000 Rh2DG298700
rosa_wichuraiana	Rw2G021480 Rw2G021530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	580
Acc36I	ACCTGC	1 cut(s)	655
AccB1I	GGYRCC	1 cut(s)	1109
AccB7I	CCANNNNNTGG	1 cut(s)	974
AccI	GTMKAC	1 cut(s)	672
AciI	CCGC	4 cut(s)	38, 1180, 1415, 1440
AclWI	GGATC	3 cut(s)	411, 914, 927
AcsI	RAATTY	5 cut(s)	314, 584, 826, 876, 1252
AcuI	CTGAAG	1 cut(s)	664
AfaI	GTAC	2 cut(s)	610, 700
AfiI	CCNNNNNNNGG	5 cut(s)	533, 974, 1085, 1264, 1268
AflII	CTTAAG	1 cut(s)	149
AflIII	ACRYGT	1 cut(s)	667
AgsI	TTSAA	3 cut(s)	124, 133, 772
AhlI	ACTAGT	1 cut(s)	16
AjnI	CCWGG	2 cut(s)	637, 694
AluBI	AGCT	9 cut(s)	271, 278, 443, 491, 893, 944, 1085, 1160, 1412
AluI	AGCT	9 cut(s)	271, 278, 443, 491, 893, 944, 1085, 1160, 1412
Alw26I	GTCTC	1 cut(s)	1316
AlwI	GGATC	3 cut(s)	411, 914, 927
AlwNI	CAGNNNCTG	1 cut(s)	638
AoxI	GGCC	1 cut(s)	965
ApeKI	GCWGC	2 cut(s)	893, 1412
ApoI	RAATTY	5 cut(s)	314, 584, 826, 876, 1252
ArsI	GACNNNNNNTTYG	2 cut(s)	1384, 1416
Asp700I	GAANNNNTTC	3 cut(s)	45, 128, 628
AspLEI	GCGC	3 cut(s)	26, 581, 1132
AsuHPI	GGTGA	5 cut(s)	70, 239, 560, 1068, 1480
BamHI	GGATCC	1 cut(s)	919
BanI	GGYRCC	1 cut(s)	1109
BbsI	GAAGAC	1 cut(s)	121
BbvI	GCAGC	2 cut(s)	880, 1399
BccI	CCATC	8 cut(s)	49, 187, 259, 400, 659, 782, 968, 1025
BceAI	ACGGC	3 cut(s)	51, 1285, 1358
BciT130I	CCWGG	2 cut(s)	639, 696
BciVI	GTATCC	1 cut(s)	564
BcoDI	GTCTC	1 cut(s)	1316
BcuI	ACTAGT	1 cut(s)	16
BfaI	CTAG	5 cut(s)	17, 98, 423, 1161, 1395
BfmI	CTRYAG	1 cut(s)	894
BfoI	RGCGCY	1 cut(s)	1133
BfrI	CTTAAG	1 cut(s)	149
BfuAI	ACCTGC	1 cut(s)	655
BfuI	GTATCC	1 cut(s)	564
BglII	AGATCT	2 cut(s)	145, 412
BisI	GCNGC	2 cut(s)	894, 1413
BlsI	GCNGC	2 cut(s)	895, 1414
Bme1390I	CCNGG	2 cut(s)	639, 696
BmiI	GGNNCC	2 cut(s)	921, 1111
BmrFI	CCNGG	2 cut(s)	639, 696
BmrI	ACTGGG	1 cut(s)	521
BmsI	GCATC	5 cut(s)	238, 465, 1216, 1360, 1440
BmuI	ACTGGG	1 cut(s)	521
BpiI	GAAGAC	1 cut(s)	121
BpmI	CTGGAG	2 cut(s)	459, 660
Bpu10I	CCTNAGC	1 cut(s)	1335
BpuEI	CTTGAG	1 cut(s)	504
BsaJI	CCNNGG	2 cut(s)	85, 471
BsaWI	WCCGGW	1 cut(s)	1490
BsaXI	ACNNNNNCTCC	2 cut(s)	402, 432
Bsc4I	CCNNNNNNNGG	5 cut(s)	533, 974, 1085, 1264, 1268
Bse1I	ACTGG	5 cut(s)	249, 442, 527, 923, 1075
Bse3DI	GCAATG	3 cut(s)	145, 549, 819
BseBI	CCWGG	2 cut(s)	639, 696
BseDI	CCNNGG	2 cut(s)	85, 471
BseGI	GGATG	2 cut(s)	253, 1036
BseLI	CCNNNNNNNGG	5 cut(s)	533, 974, 1085, 1264, 1268
BseMI	GCAATG	3 cut(s)	145, 549, 819
BseMII	CTCAG	1 cut(s)	1337
BseNI	ACTGG	5 cut(s)	249, 442, 527, 923, 1075
BseRI	GAGGAG	2 cut(s)	738, 1236
BseXI	GCAGC	2 cut(s)	880, 1399
BsgI	GTGCAG	1 cut(s)	1485
BshFI	GGCC	1 cut(s)	967
BshNI	GGYRCC	1 cut(s)	1109
BsiSI	CCGG	2 cut(s)	1113, 1491
BslFI	GGGAC	1 cut(s)	509
BslI	CCNNNNNNNGG	5 cut(s)	533, 974, 1085, 1264, 1268
BsmAI	GTCTC	1 cut(s)	1316
BsmFI	GGGAC	1 cut(s)	509
BsmI	GAATGC	3 cut(s)	432, 514, 1308
BsnI	GGCC	1 cut(s)	967
Bsp143I	GATC	7 cut(s)	94, 145, 403, 412, 919, 1189, 1349
BspACI	CCGC	4 cut(s)	38, 1180, 1415, 1440
BspANI	GGCC	1 cut(s)	967
BspCNI	CTCAG	1 cut(s)	1338
BspHI	TCATGA	1 cut(s)	310
BspLI	GGNNCC	2 cut(s)	921, 1111
BspMAI	CTGCAG	1 cut(s)	898
BspMI	ACCTGC	1 cut(s)	655
BspPI	GGATC	3 cut(s)	411, 914, 927
BspQI	GCTCTTC	1 cut(s)	258
BspT107I	GGYRCC	1 cut(s)	1109
BspTI	CTTAAG	1 cut(s)	149
BsrDI	GCAATG	3 cut(s)	145, 549, 819
BsrI	ACTGG	5 cut(s)	249, 442, 527, 923, 1075
BssECI	CCNNGG	2 cut(s)	85, 471
BssMI	GATC	7 cut(s)	94, 145, 403, 412, 919, 1189, 1349
BssNAI	GTATAC	1 cut(s)	673
BssT1I	CCWWGG	2 cut(s)	85, 471
Bst1107I	GTATAC	1 cut(s)	673
Bst2UI	CCWGG	2 cut(s)	639, 696
Bst4CI	ACNGT	7 cut(s)	46, 511, 708, 1276, 1432, 1476, 1515
Bst6I	CTCTTC	2 cut(s)	258, 756
BstAFI	CTTAAG	1 cut(s)	149
BstC8I	GCNNGC	5 cut(s)	432, 493, 1134, 1341, 1500
BstDEI	CTNAG	2 cut(s)	1335, 1346
BstEII	GGTNACC	1 cut(s)	593
BstF5I	GGATG	2 cut(s)	253, 1036
BstH2I	RGCGCY	1 cut(s)	1133
BstHHI	GCGC	3 cut(s)	26, 581, 1132
BstKTI	GATC	7 cut(s)	97, 148, 406, 415, 922, 1192, 1352
BstMAI	GTCTC	1 cut(s)	1316
BstMBI	GATC	7 cut(s)	94, 145, 403, 412, 919, 1189, 1349
BstMWI	GCNNNNNNNGC	5 cut(s)	89, 440, 1118, 1127, 1142
BstNI	CCWGG	2 cut(s)	639, 696
BstNSI	RCATGY	2 cut(s)	671, 1343
BstPI	GGTNACC	1 cut(s)	593
BstSCI	CCNGG	2 cut(s)	637, 694
BstSFI	CTRYAG	1 cut(s)	894
BstV1I	GCAGC	2 cut(s)	880, 1399
BstV2I	GAAGAC	1 cut(s)	121
BstX2I	RGATCY	4 cut(s)	145, 403, 412, 919
BstXI	CCANNNNNNTGG	1 cut(s)	472
BstYI	RGATCY	4 cut(s)	145, 403, 412, 919
BstZ17I	GTATAC	1 cut(s)	673
BsuI	GTATCC	1 cut(s)	564
BsuRI	GGCC	1 cut(s)	967
BtgZI	GCGATG	1 cut(s)	278
BtsCI	GGATG	2 cut(s)	253, 1036
BtsI	GCAGTG	1 cut(s)	465
BtsIMutI	CAGTG	3 cut(s)	435, 465, 1068
BveI	ACCTGC	1 cut(s)	655
Cac8I	GCNNGC	5 cut(s)	432, 493, 1134, 1341, 1500
CaiI	CAGNNNCTG	1 cut(s)	638
CciI	TCATGA	1 cut(s)	310
CfoI	GCGC	3 cut(s)	26, 581, 1132
CsiI	ACCWGGT	1 cut(s)	694
Csp6I	GTAC	2 cut(s)	609, 699
CviAII	CATG	6 cut(s)	224, 311, 668, 1049, 1105, 1340
CviQI	GTAC	2 cut(s)	609, 699
DdeI	CTNAG	2 cut(s)	1335, 1346
DpnI	GATC	7 cut(s)	96, 147, 405, 414, 921, 1191, 1351
DpnII	GATC	7 cut(s)	94, 145, 403, 412, 919, 1189, 1349
DraI	TTTAAA	1 cut(s)	355
Eam1104I	CTCTTC	2 cut(s)	258, 756
EarI	CTCTTC	2 cut(s)	258, 756
EciI	GGCGGA	1 cut(s)	53
Eco130I	CCWWGG	2 cut(s)	85, 471
Eco57I	CTGAAG	1 cut(s)	664
Eco91I	GGTNACC	1 cut(s)	593
EcoO65I	GGTNACC	1 cut(s)	593
EcoRI	GAATTC	2 cut(s)	314, 876
EcoRII	CCWGG	2 cut(s)	637, 694
EcoT14I	CCWWGG	2 cut(s)	85, 471
ErhI	CCWWGG	2 cut(s)	85, 471
FaeI	CATG	6 cut(s)	227, 314, 671, 1052, 1108, 1343
FaqI	GGGAC	1 cut(s)	509
FatI	CATG	6 cut(s)	223, 310, 667, 1048, 1104, 1339
FauI	CCCGC	1 cut(s)	1433
FauNDI	CATATG	1 cut(s)	1468
FblI	GTMKAC	1 cut(s)	672
Fnu4HI	GCNGC	2 cut(s)	894, 1413
FokI	GGATG	2 cut(s)	260, 1043
Fsp4HI	GCNGC	2 cut(s)	894, 1413
FspBI	CTAG	5 cut(s)	17, 98, 423, 1161, 1395
FspI	TGCGCA	1 cut(s)	580
GlaI	GCGC	3 cut(s)	25, 580, 1131
GluI	GCNGC	2 cut(s)	894, 1413
GsuI	CTGGAG	2 cut(s)	459, 660
HaeII	RGCGCY	1 cut(s)	1133
HaeIII	GGCC	1 cut(s)	967
HapII	CCGG	2 cut(s)	1113, 1491
HhaI	GCGC	3 cut(s)	26, 581, 1132
Hin1II	CATG	6 cut(s)	227, 314, 671, 1052, 1108, 1343
Hin6I	GCGC	3 cut(s)	24, 579, 1130
HinP1I	GCGC	3 cut(s)	24, 579, 1130
HincII	GTYRAC	1 cut(s)	949
HindII	GTYRAC	1 cut(s)	949
HinfI	GANTC	5 cut(s)	167, 323, 768, 864, 1418
HpaI	GTTAAC	1 cut(s)	949
HpaII	CCGG	2 cut(s)	1113, 1491
HphI	GGTGA	5 cut(s)	70, 239, 560, 1068, 1480
Hpy166II	GTNNAC	7 cut(s)	611, 673, 949, 1046, 1076, 1378, 1488
Hpy188I	TCNGA	7 cut(s)	30, 410, 504, 570, 683, 1301, 1347
Hpy188III	TCNNGA	4 cut(s)	311, 383, 621, 861
Hpy8I	GTNNAC	7 cut(s)	611, 673, 949, 1046, 1076, 1378, 1488
HpyAV	CCTTC	3 cut(s)	118, 758, 1147
HpyCH4III	ACNGT	7 cut(s)	46, 511, 708, 1276, 1432, 1476, 1515
HpyCH4IV	ACGT	1 cut(s)	486
HpyF10VI	GCNNNNNNNGC	5 cut(s)	89, 440, 1118, 1127, 1142
HpyF3I	CTNAG	2 cut(s)	1335, 1346
HpySE526I	ACGT	1 cut(s)	486
Hsp92II	CATG	6 cut(s)	227, 314, 671, 1052, 1108, 1343
HspAI	GCGC	3 cut(s)	24, 579, 1130
KspAI	GTTAAC	1 cut(s)	949
Kzo9I	GATC	7 cut(s)	94, 145, 403, 412, 919, 1189, 1349
LguI	GCTCTTC	1 cut(s)	258
LmnI	GCTCC	6 cut(s)	31, 268, 275, 440, 941, 1157
Lsp1109I	GCAGC	2 cut(s)	880, 1399
LweI	GCATC	5 cut(s)	238, 465, 1216, 1360, 1440
MabI	ACCWGGT	1 cut(s)	694
MaeI	CTAG	5 cut(s)	17, 98, 423, 1161, 1395
MaeII	ACGT	1 cut(s)	486
MaeIII	GTNAC	2 cut(s)	593, 1426
MalI	GATC	7 cut(s)	96, 147, 405, 414, 921, 1191, 1351
MboI	GATC	7 cut(s)	94, 145, 403, 412, 919, 1189, 1349
MboII	GAAGA	5 cut(s)	121, 155, 245, 360, 743
MflI	RGATCY	4 cut(s)	145, 403, 412, 919
MlyI	GAGTC	2 cut(s)	317, 1427
MmeI	TCCRAC	3 cut(s)	853, 1198, 1279
MroXI	GAANNNNTTC	3 cut(s)	45, 128, 628
MseI	TTAA	6 cut(s)	150, 162, 354, 900, 948, 992
MslI	CAYNNNNRTG	1 cut(s)	228
MspCI	CTTAAG	1 cut(s)	149
MspI	CCGG	2 cut(s)	1113, 1491
MspR9I	CCNGG	2 cut(s)	639, 696
Mva1269I	GAATGC	3 cut(s)	432, 514, 1308
MvaI	CCWGG	2 cut(s)	639, 696
MwoI	GCNNNNNNNGC	5 cut(s)	89, 440, 1118, 1127, 1142
NdeI	CATATG	1 cut(s)	1468
NdeII	GATC	7 cut(s)	94, 145, 403, 412, 919, 1189, 1349
NlaIII	CATG	6 cut(s)	227, 314, 671, 1052, 1108, 1343
NlaIV	GGNNCC	2 cut(s)	921, 1111
NmuCI	GTSAC	1 cut(s)	1426
NsbI	TGCGCA	1 cut(s)	580
NspI	RCATGY	2 cut(s)	671, 1343
PaeI	GCATGC	1 cut(s)	1343
PagI	TCATGA	1 cut(s)	310
PciI	ACATGT	1 cut(s)	667
PciSI	GCTCTTC	1 cut(s)	258
PctI	GAATGC	3 cut(s)	432, 514, 1308
PdmI	GAANNNNTTC	3 cut(s)	45, 128, 628
PfeI	GAWTC	3 cut(s)	167, 768, 864
PflFI	GACNNNGTC	1 cut(s)	449
PflMI	CCANNNNNTGG	1 cut(s)	974
PfoI	TCCNGGA	1 cut(s)	637
PkrI	GCNGC	2 cut(s)	895, 1414
PleI	GAGTC	2 cut(s)	317, 1426
PpsI	GAGTC	2 cut(s)	317, 1426
PscI	ACATGT	1 cut(s)	667
Psp6I	CCWGG	2 cut(s)	637, 694
PspEI	GGTNACC	1 cut(s)	593
PspGI	CCWGG	2 cut(s)	637, 694
PspN4I	GGNNCC	2 cut(s)	921, 1111
PsrI	GAACNNNNNNTAC	2 cut(s)	601, 633
PstI	CTGCAG	1 cut(s)	898
PstNI	CAGNNNCTG	1 cut(s)	638
PsuI	RGATCY	4 cut(s)	145, 403, 412, 919
PsyI	GACNNNGTC	1 cut(s)	449
RsaI	GTAC	2 cut(s)	610, 700
RsaNI	GTAC	2 cut(s)	609, 699
RseI	CAYNNNNRTG	1 cut(s)	228
SapI	GCTCTTC	1 cut(s)	258
SaqAI	TTAA	6 cut(s)	150, 162, 354, 900, 948, 992
SatI	GCNGC	2 cut(s)	894, 1413
Sau3AI	GATC	7 cut(s)	94, 145, 403, 412, 919, 1189, 1349
SchI	GAGTC	2 cut(s)	317, 1427
ScrFI	CCNGG	2 cut(s)	639, 696
SexAI	ACCWGGT	1 cut(s)	694
SfaNI	GCATC	5 cut(s)	238, 465, 1216, 1360, 1440
SfcI	CTRYAG	1 cut(s)	894
SmiMI	CAYNNNNRTG	1 cut(s)	228
SmlI	CTYRAG	2 cut(s)	149, 519
SmoI	CTYRAG	2 cut(s)	149, 519
SpeI	ACTAGT	1 cut(s)	16
SphI	GCATGC	1 cut(s)	1343
SsiI	CCGC	4 cut(s)	38, 1180, 1415, 1440
SspI	AATATT	1 cut(s)	1315
SspMI	CTAG	5 cut(s)	17, 98, 423, 1161, 1395
StyD4I	CCNGG	2 cut(s)	637, 694
StyI	CCWWGG	2 cut(s)	85, 471
TaaI	ACNGT	7 cut(s)	46, 511, 708, 1276, 1432, 1476, 1515
TaiI	ACGT	1 cut(s)	489
TaqI	TCGA	9 cut(s)	241, 256, 294, 321, 399, 786, 1026, 1039, 1192
TfiI	GAWTC	3 cut(s)	167, 768, 864
Tru1I	TTAA	6 cut(s)	150, 162, 354, 900, 948, 992
Tru9I	TTAA	6 cut(s)	150, 162, 354, 900, 948, 992
TscAI	CASTG	3 cut(s)	442, 472, 1075
TseFI	GTSAC	1 cut(s)	1426
TseI	GCWGC	2 cut(s)	893, 1412
Tsp45I	GTSAC	1 cut(s)	1426
TspDTI	ATGAA	6 cut(s)	156, 246, 307, 327, 777, 1485
TspRI	CASTG	3 cut(s)	442, 472, 1075
Tth111I	GACNNNGTC	1 cut(s)	449
Van91I	CCANNNNNTGG	1 cut(s)	974
Vha464I	CTTAAG	1 cut(s)	149
XapI	RAATTY	5 cut(s)	314, 584, 826, 876, 1252
XceI	RCATGY	2 cut(s)	671, 1343
XmiI	GTMKAC	1 cut(s)	672
XmnI	GAANNNNTTC	3 cut(s)	45, 128, 628
XspI	CTAG	5 cut(s)	17, 98, 423, 1161, 1395

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.