Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0002493

Physical Location & Seq

Genomic Coordinates Forward (+)

20588180 .. 20591572

Gene Structure 3393 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0215200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2166 bp

ATGGCGGTCTCTGGTACATTCATTAGACCAAATCAGTACTTCTCTTCATGCGTCAATACTCCAAGTCCAAGACTAAATCCCAGTTGCAGAAAACAGTTCTGTTTGAAGGCTTCAGCTGGTAACTCAGACGGCGAGGACCGCAAGTTGACAAGAAAGGAGAAAGACGGAGGATGTAAGATCGAGTACACTACTGAAAAACCAGCCACGCCATTGCTGGACACAATCAATTACCCAGCTCACATGAAGAATCTATCAACACAGGATCTCGAACAACTAGCAGCAGAGCTCAGAATGGATATTGTTCACAGTGTTTCACAGACAGGTGGGCATCTCAGTTCTAGCTTGGGTGTGGTGGAGCTATCAGTGGCACTGCATCATGTGTTCAGCACCCCTGACGATAAAATCATATGGGATGTTGGTCATCAGGCTTATCCTCATAAAATTCTCACAGGAAGGAGGTCCAAGATGCATACAATGAGGAAAACTTCAGGTCTTGCAGGATTTCCCAAAAGGGATGAGAGCGTTCATGATGCTTTTGGTGTCGGGCACAGTTCTACAAGCATATCTGCTGGTTTAGGCATGGCAGTTGCAAGAGATCTACTTGGGAAGGACAACAGTATCATTTCAGTGATTGGAGATGGAGCCATGACAGCAGGACAAGCATATGAAGCCATGAACAACGCAGGATACCTTGACGCTAATCTGATCGTCATACTGAATGACAATAAGCAAGTCTCTTTACCCACCGCCACCCTTGATGGCCCTGCAATGCCAGTTGGAGCCCTCAGCAGTGCTCTAACCAAACTCCAAGCAAGCACCCAGTTTCGCAAACTTCGAGAAGCTGCAAAAAGCATTACAAAGCAAATCGGAGGACAAACACATGAAGTTGCAGCTAAAGTAGATGAGTATGCAAGAGGAATGATTAGTGCTTCTGGATCCACTCTCTTCGAGGAGCTTGGATTGTATTATATTGGTCCAGTAGACGGTCACAATGTTGCAGACTTGGTCAACATTTTCCAGAGAGTGAAAGCCATGCCTGCCCCGGGGCCAGTTTTGATCCACATCATGACAGAGAAAGGAAAAGGCTACCCCCCAGCCGAGGCCGCAGCTGATAGAATGCATGGGGTTGTCAAGTTTGACCCACCAACAGGCCAGCAATTTAAGACCAAATCCCCTACGCTTTCATACACTCAGTACTTTGCTGAATCTCTGATAAAGGAAGCTGAAACAGATGAGAAAATTGTAGCGATCCATGCAGCAATGGGTGGTGGCACTGGTCTAAATTACTTCCAGAAGAGGTTTCCAGATCGTTGCTTTGATGTGGGGATTGCTGAGCAACATGCTGTCACATTTGCAGCTGGTTTAGCTGCAGAAGGTCTCAAGCCATTCTGTGCTATCTACTCAACATTCCTGCAACGAGGATATGATCAGGTTGTCCATGATGTAGATCTTCAAAAACTACCTGTCCGCTTTGCAATGGATCGAGCTGGCTTGGTTGGTGCAGATGGTCCCACCCACTGTGGAGCATTTGATATCACATACATGGCTTGCTTGCCCAATATGGTGGTTATGGCTCCATCTGATGAAGCTGAACTGATGCACATGGTCGCCACAGCAGCAGTTATAGATGATAGACCAAGCTGCTTTAGATTTCCAAGAGGCAATGGTATTGGAGCAGTTCTTCCTGCCCATAACAAAGGAACTCCAATTGAGATTGGGAAAGGAAGAGTACTGATGGAAGGCAGTAGAGTTGCAATTTTGGGATATGGTTCTATAGTTCAGCAATGTGTGGGAGCAGCAAACATGCTGAAAACCAGGGACATATTCGTGACAGTCGCAGATGCAAGGTTTTGCAAACCTTTGGATACAGAGCTAATCAAGCAATTGGCCAAGGAGCATGAAATCCTTATTACGGTGGAAGAAGGTTCAATTGGAGGTTTTGGATCTCATGTATCACACTACCTAAGTTTGAGTGGTATTCTAGATGGACCACTCAAGTTGAGAGCAATGGTACTTCCTGATAGATACATTGATCATGGAGCACCCCAGGATCAACTTGAAGAAGCAGGCCTCTCATCAAGGCAGATCTCAGCAACAGTATTGTCTCTCTTAGGGAGGCCAAAAGAAGCTCTTCAGTTCATTTCAGGACGAGAGTGGACTCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004764 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009423 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0016053 GO:0016491 GO:0016614 GO:0016616 GO:0019632 GO:0019752 GO:0022414 GO:0032501 GO:0032502 GO:0032787 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043648 GO:0043650 GO:0044237 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046417 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0055114 GO:0061458 GO:0071704 GO:1901576 GO:1901615

KEGG Pathways

Metabolic & Signaling

ko00400 ko01100 ko01110 ko01130 ko01230 map00400 map01100 map01110 map01130 map01230

Pfam Domains

Protein Families

DHquinase_I Shikimate_DH Shikimate_dh_N

Protein Analysis

721

Amino Acids

77.67

Weight (kDa)

6.69

Isoelectric Point (pI)

36.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DXP_synthase_N	PF13292	72 - 357	6e-109	1-deoxy-D-xylulose-5-phosphate synthase
E1_dh	PF00676	180 - 243	6.7e-06	Dehydrogenase E1 component
Transket_pyr	PF02779	394 - 555	5.6e-49	Transketolase, pyrimidine binding domain
Transketolase_C	PF02780	573 - 696	2.8e-31	Transketolase, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002493)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06350
fragaria_vesca	FvH4_1g23213 FvH4_1g23213 FvH4_1g23213 FvH4_1g23232 FvH4_1g23232 FvH4_1g23232
malus_domestica	MD00G1130500.v1.1 MD15G1335600.v1.1
prunus_persica	Prupe.6G166100_v2.0.a1 Prupe.6G166100_v2.0.a1 Prupe.6G166100_v2.0.a1 Prupe.6G166200_v2.0.a1 Prupe.6G166200_v2.0.a1 Prupe.6G166200_v2.0.a1 Prupe.6G166200_v2.0.a1 Prupe.6G166200_v2.0.a1
pyrus_communis	pycom01g04680 pycom01g04700 pycom15g28990
rosa_chinensis	RchiOBHm_Chr2g0117991 RchiOBHm_Chr2g0118061
rosa_laevigata	RLG00000018384 RLG00000018389 RLG00000018397
rosa_multiflora	Rmu_sc0000948.1_g000018 Rmu_sc0000948.1_g000032
rosa_roxburghii	Rroxscaffold_2G00125870 Rroxscaffold_2G00126000 Rroxscaffold_2G00126080 Rroxscaffold_5G00352100
rosa_rugosa	Rorug02G0215100 Rorug02G0215200 Rorug02G0215500.1 Rorug02G0217000
rosa_samantha	Rh2BG283700 Rh2DG280600 Rh2DG298000 Rh2DG298700
rosa_wichuraiana	Rw2G021480 Rw2G021530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	981
AciI	CCGC	5 cut(s)	5, 139, 747, 1104, 1468
AclWI	GGATC	8 cut(s)	270, 930, 943, 1051, 1243, 1488, 1951, 2058
AcoI	YGGCCR	1 cut(s)	1887
AcsI	RAATTY	1 cut(s)	441
AcuI	CTGAAG	3 cut(s)	96, 471, 2117
AfaI	GTAC	6 cut(s)	16, 38, 185, 1196, 1731, 2013
AfiI	CCNNNNNNNGG	5 cut(s)	983, 1043, 1099, 1148, 1912
AgsI	TTSAA	4 cut(s)	106, 1454, 1929, 2060
AjnI	CCWGG	2 cut(s)	1814, 2046
AjuI	GAANNNNNNNTTGG	2 cut(s)	1914, 1946
Alw21I	GWGCWC	3 cut(s)	288, 796, 2044
Alw26I	GTCTC	4 cut(s)	13, 739, 1382, 2109
AlwI	GGATC	8 cut(s)	270, 930, 943, 1051, 1243, 1488, 1951, 2058
Ama87I	CYCGRG	1 cut(s)	1042
AoxI	GGCC	7 cut(s)	760, 1046, 1101, 1150, 1887, 2068, 2117
ApoI	RAATTY	1 cut(s)	441
Asp700I	GAANNNNTTC	1 cut(s)	2130
AspS9I	GGNCC	7 cut(s)	136, 459, 761, 974, 1046, 1508, 1988
AsuC2I	CCSGG	2 cut(s)	1043, 1044
AvaI	CYCGRG	1 cut(s)	1042
AvaII	GGWCC	5 cut(s)	136, 459, 974, 1508, 1988
BaeGI	GKGCMC	1 cut(s)	549
BaeI	ACNNNNGTAYC	2 cut(s)	601, 634
BalI	TGGCCA	1 cut(s)	1889
BamHI	GGATCC	1 cut(s)	935
BanII	GRGCYC	2 cut(s)	288, 784
Bbv12I	GWGCWC	3 cut(s)	288, 796, 2044
BbvCI	CCTCAGC	1 cut(s)	785
BccI	CCATC	6 cut(s)	632, 752, 1499, 1585, 1729, 1979
BceAI	ACGGC	1 cut(s)	145
BciT130I	CCWGG	2 cut(s)	1816, 2048
BciVI	GTATCC	2 cut(s)	680, 1858
BclI	TGATCA	2 cut(s)	1426, 2032
BcnI	CCSGG	2 cut(s)	1043, 1044
BcoDI	GTCTC	4 cut(s)	13, 739, 1382, 2109
BfaI	CTAG	3 cut(s)	275, 339, 1982
BfmI	CTRYAG	2 cut(s)	1368, 1773
BfuI	GTATCC	2 cut(s)	680, 1858
BglII	AGATCT	3 cut(s)	595, 1447, 2085
BlpI	GCTNAGC	1 cut(s)	1332
BmcAI	AGTACT	3 cut(s)	38, 1196, 1731
Bme1390I	CCNGG	4 cut(s)	1043, 1044, 1816, 2048
Bme18I	GGWCC	5 cut(s)	136, 459, 974, 1508, 1988
BmeT110I	CYCGRG	1 cut(s)	1042
BmgT120I	GGNCC	7 cut(s)	136, 459, 761, 974, 1046, 1508, 1988
BmiI	GGNNCC	6 cut(s)	643, 781, 937, 1047, 1510, 1575
BmrFI	CCNGG	4 cut(s)	1043, 1044, 1816, 2048
BmrI	ACTGGG	2 cut(s)	75, 814
BmsI	GCATC	6 cut(s)	337, 382, 456, 520, 1587, 1831
BmuI	ACTGGG	2 cut(s)	75, 814
Bpu10I	CCTNAGC	1 cut(s)	785
Bpu1102I	GCTNAGC	1 cut(s)	1332
BpuEI	CTTGAG	2 cut(s)	1364, 1979
BpuMI	CCSGG	2 cut(s)	1043, 1044
BsaBI	GATNNNNATC	2 cut(s)	1061, 1446
BsaI	GGTCTC	2 cut(s)	13, 1382
BsaJI	CCNNGG	7 cut(s)	1041, 1042, 1043, 1098, 1815, 1890, 2046
Bsc4I	CCNNNNNNNGG	5 cut(s)	983, 1043, 1099, 1148, 1912
Bse1I	ACTGG	6 cut(s)	81, 773, 820, 977, 1049, 1279
Bse3DI	GCAATG	7 cut(s)	209, 774, 1266, 1482, 1669, 1790, 2013
Bse8I	GATNNNNATC	2 cut(s)	1061, 1446
BseBI	CCWGG	2 cut(s)	1816, 2048
BseDI	CCNNGG	7 cut(s)	1041, 1042, 1043, 1098, 1815, 1890, 2046
BseGI	GGATG	3 cut(s)	176, 418, 520
BseJI	GATNNNNATC	2 cut(s)	1061, 1446
BseLI	CCNNNNNNNGG	5 cut(s)	983, 1043, 1099, 1148, 1912
BseMI	GCAATG	7 cut(s)	209, 774, 1266, 1482, 1669, 1790, 2013
BseMII	CTCAG	7 cut(s)	138, 301, 346, 799, 1205, 1323, 2103
BseNI	ACTGG	6 cut(s)	81, 773, 820, 977, 1049, 1279
BseRI	GAGGAG	1 cut(s)	965
BseSI	GKGCMC	1 cut(s)	549
BseYI	CCCAGC	2 cut(s)	232, 1093
BsgI	GTGCAG	1 cut(s)	1521
BshFI	GGCC	7 cut(s)	762, 1048, 1103, 1152, 1889, 2070, 2119
BsiHKAI	GWGCWC	3 cut(s)	288, 796, 2044
BsiHKCI	CYCGRG	1 cut(s)	1042
BsiSI	CCGG	1 cut(s)	1043
BslFI	GGGAC	2 cut(s)	1494, 1832
BslI	CCNNNNNNNGG	5 cut(s)	983, 1043, 1099, 1148, 1912
BsmAI	GTCTC	4 cut(s)	13, 739, 1382, 2109
BsmFI	GGGAC	2 cut(s)	1494, 1832
BsmI	GAATGC	1 cut(s)	1122
BsnI	GGCC	7 cut(s)	762, 1048, 1103, 1152, 1889, 2070, 2119
Bso31I	GGTCTC	2 cut(s)	13, 1382
BsoBI	CYCGRG	1 cut(s)	1042
Bsp1286I	GDGCHC	5 cut(s)	288, 549, 784, 796, 2044
Bsp1720I	GCTNAGC	1 cut(s)	1332
BspACI	CCGC	5 cut(s)	5, 139, 747, 1104, 1468
BspANI	GGCC	7 cut(s)	762, 1048, 1103, 1152, 1889, 2070, 2119
BspCNI	CTCAG	7 cut(s)	137, 300, 345, 798, 1204, 1324, 2102
BspHI	TCATGA	2 cut(s)	526, 1065
BspLI	GGNNCC	6 cut(s)	643, 781, 937, 1047, 1510, 1575
BspMAI	CTGCAG	1 cut(s)	1372
BspPI	GGATC	8 cut(s)	270, 930, 943, 1051, 1243, 1488, 1951, 2058
BspQI	GCTCTTC	1 cut(s)	2136
BspTNI	GGTCTC	2 cut(s)	13, 1382
BsrDI	GCAATG	7 cut(s)	209, 774, 1266, 1482, 1669, 1790, 2013
BsrI	ACTGG	6 cut(s)	81, 773, 820, 977, 1049, 1279
BssECI	CCNNGG	7 cut(s)	1041, 1042, 1043, 1098, 1815, 1890, 2046
BssT1I	CCWWGG	1 cut(s)	1890
Bst2UI	CCWGG	2 cut(s)	1816, 2048
Bst4CI	ACNGT	9 cut(s)	96, 308, 551, 617, 986, 1520, 1834, 1915, 2098
Bst6I	CTCTTC	5 cut(s)	49, 950, 1289, 1720, 2136
BstC8I	GCNNGC	7 cut(s)	814, 1038, 1154, 1489, 1549, 1553, 2068
BstDEI	CTNAG	9 cut(s)	124, 287, 332, 785, 1191, 1332, 1964, 2089, 2110
BstF5I	GGATG	3 cut(s)	176, 418, 520
BstMAI	GTCTC	4 cut(s)	13, 739, 1382, 2109
BstNI	CCWGG	2 cut(s)	1816, 2048
BstNSI	RCATGY	2 cut(s)	1343, 1807
BstSCI	CCNGG	4 cut(s)	1041, 1042, 1814, 2046
BstSFI	CTRYAG	2 cut(s)	1368, 1773
BstSLI	GKGCMC	1 cut(s)	549
BstX2I	RGATCY	6 cut(s)	262, 595, 935, 1447, 1943, 2085
BstXI	CCANNNNNNTGG	1 cut(s)	1564
BstYI	RGATCY	6 cut(s)	262, 595, 935, 1447, 1943, 2085
BsuI	GTATCC	2 cut(s)	680, 1858
BsuRI	GGCC	7 cut(s)	762, 1048, 1103, 1152, 1889, 2070, 2119
BtsCI	GGATG	3 cut(s)	176, 418, 520
BtsI	GCAGTG	2 cut(s)	368, 796
BtsIMutI	CAGTG	7 cut(s)	313, 368, 369, 633, 796, 1272, 1516
Cac8I	GCNNGC	7 cut(s)	814, 1038, 1154, 1489, 1549, 1553, 2068
CciI	TCATGA	2 cut(s)	526, 1065
Cfr13I	GGNCC	7 cut(s)	136, 459, 761, 974, 1046, 1508, 1988
Cfr9I	CCCGGG	1 cut(s)	1042
CseI	GACGC	2 cut(s)	40, 704
Csp6I	GTAC	6 cut(s)	15, 37, 184, 1195, 1730, 2012
CspCI	CAANNNNNGTGG	2 cut(s)	1980, 2015
CviQI	GTAC	6 cut(s)	15, 37, 184, 1195, 1730, 2012
DdeI	CTNAG	9 cut(s)	124, 287, 332, 785, 1191, 1332, 1964, 2089, 2110
EaeI	YGGCCR	1 cut(s)	1887
Eam1104I	CTCTTC	5 cut(s)	49, 950, 1289, 1720, 2136
EarI	CTCTTC	5 cut(s)	49, 950, 1289, 1720, 2136
Ecl136II	GAGCTC	1 cut(s)	286
Eco130I	CCWWGG	1 cut(s)	1890
Eco147I	AGGCCT	1 cut(s)	2070
Eco24I	GRGCYC	2 cut(s)	288, 784
Eco31I	GGTCTC	2 cut(s)	13, 1382
Eco32I	GATATC	1 cut(s)	1534
Eco47I	GGWCC	5 cut(s)	136, 459, 974, 1508, 1988
Eco53kI	GAGCTC	1 cut(s)	286
Eco57I	CTGAAG	3 cut(s)	96, 471, 2117
Eco88I	CYCGRG	1 cut(s)	1042
EcoICRI	GAGCTC	1 cut(s)	286
EcoRII	CCWGG	2 cut(s)	1814, 2046
EcoRV	GATATC	1 cut(s)	1534
EcoT14I	CCWWGG	1 cut(s)	1890
EcoT22I	ATGCAT	2 cut(s)	471, 1122
EcoT38I	GRGCYC	2 cut(s)	288, 784
ErhI	CCWWGG	1 cut(s)	1890
FalI	AAGNNNNNCTT	2 cut(s)	2115, 2147
FaqI	GGGAC	2 cut(s)	1494, 1832
FauNDI	CATATG	2 cut(s)	407, 664
FbaI	TGATCA	2 cut(s)	1426, 2032
FblI	GTMKAC	1 cut(s)	981
FokI	GGATG	3 cut(s)	183, 425, 527
FriOI	GRGCYC	2 cut(s)	288, 784
FspBI	CTAG	3 cut(s)	275, 339, 1982
GsaI	CCCAGC	2 cut(s)	236, 1097
HaeIII	GGCC	7 cut(s)	762, 1048, 1103, 1152, 1889, 2070, 2119
HapII	CCGG	1 cut(s)	1043
HgaI	GACGC	2 cut(s)	40, 704
HincII	GTYRAC	2 cut(s)	147, 1009
HindII	GTYRAC	2 cut(s)	147, 1009
HinfI	GANTC	3 cut(s)	247, 1205, 2158
HpaII	CCGG	1 cut(s)	1043
Hpy166II	GTNNAC	6 cut(s)	147, 186, 304, 982, 1009, 2157
Hpy188I	TCNGA	6 cut(s)	127, 290, 705, 869, 1212, 1582
Hpy8I	GTNNAC	6 cut(s)	147, 186, 304, 982, 1009, 2157
HpyAV	CCTTC	6 cut(s)	100, 447, 601, 1367, 1733, 1916
HpyCH4III	ACNGT	9 cut(s)	96, 308, 551, 617, 986, 1520, 1834, 1915, 2098
HpyF3I	CTNAG	9 cut(s)	124, 287, 332, 785, 1191, 1332, 1964, 2089, 2110
Ksp22I	TGATCA	2 cut(s)	1426, 2032
LguI	GCTCTTC	1 cut(s)	2136
LweI	GCATC	6 cut(s)	337, 382, 456, 520, 1587, 1831
MaeI	CTAG	3 cut(s)	275, 339, 1982
MaeIII	GTNAC	4 cut(s)	119, 986, 1345, 1828
MfeI	CAATTG	3 cut(s)	1707, 1883, 1929
MflI	RGATCY	6 cut(s)	262, 595, 935, 1447, 1943, 2085
MhlI	GDGCHC	5 cut(s)	288, 549, 784, 796, 2044
MlsI	TGGCCA	1 cut(s)	1889
MluCI	AATT	9 cut(s)	226, 441, 1157, 1239, 1282, 1707, 1755, 1883, 1929
MluNI	TGGCCA	1 cut(s)	1889
MlyI	GAGTC	1 cut(s)	2152
MmeI	TCCRAC	1 cut(s)	757
Mox20I	TGGCCA	1 cut(s)	1889
Mph1103I	ATGCAT	2 cut(s)	471, 1122
MroXI	GAANNNNTTC	1 cut(s)	2130
MscI	TGGCCA	1 cut(s)	1889
MseI	TTAA	1 cut(s)	1161
MslI	CAYNNNNRTG	3 cut(s)	626, 1541, 1826
Msp20I	TGGCCA	1 cut(s)	1889
MspA1I	CMGCKG	3 cut(s)	116, 1109, 1358
MspI	CCGG	1 cut(s)	1043
MspR9I	CCNGG	4 cut(s)	1043, 1044, 1816, 2048
MunI	CAATTG	3 cut(s)	1707, 1883, 1929
Mva1269I	GAATGC	1 cut(s)	1122
MvaI	CCWGG	2 cut(s)	1816, 2048
NciI	CCSGG	2 cut(s)	1043, 1044
NdeI	CATATG	2 cut(s)	407, 664
NlaIV	GGNNCC	6 cut(s)	643, 781, 937, 1047, 1510, 1575
NmeAIII	GCCGAG	1 cut(s)	1123
NmuCI	GTSAC	3 cut(s)	986, 1345, 1828
NsiI	ATGCAT	2 cut(s)	471, 1122
NspI	RCATGY	2 cut(s)	1343, 1807
PagI	TCATGA	2 cut(s)	526, 1065
PceI	AGGCCT	1 cut(s)	2070
PciSI	GCTCTTC	1 cut(s)	2136
PcsI	WCGNNNNNNNCGW	1 cut(s)	832
PctI	GAATGC	1 cut(s)	1122
PdmI	GAANNNNTTC	1 cut(s)	2130
PfeI	GAWTC	2 cut(s)	247, 1205
PflFI	GACNNNGTC	1 cut(s)	1004
PleI	GAGTC	1 cut(s)	2152
PpsI	GAGTC	1 cut(s)	2152
Psp124BI	GAGCTC	1 cut(s)	288
Psp6I	CCWGG	2 cut(s)	1814, 2046
PspFI	CCCAGC	2 cut(s)	232, 1093
PspGI	CCWGG	2 cut(s)	1814, 2046
PspN4I	GGNNCC	6 cut(s)	643, 781, 937, 1047, 1510, 1575
PspPI	GGNCC	7 cut(s)	136, 459, 761, 974, 1046, 1508, 1988
PstI	CTGCAG	1 cut(s)	1372
PsuI	RGATCY	6 cut(s)	262, 595, 935, 1447, 1943, 2085
PsyI	GACNNNGTC	1 cut(s)	1004
PvuII	CAGCTG	3 cut(s)	116, 1109, 1358
RsaI	GTAC	6 cut(s)	16, 38, 185, 1196, 1731, 2013
RsaNI	GTAC	6 cut(s)	15, 37, 184, 1195, 1730, 2012
RseI	CAYNNNNRTG	3 cut(s)	626, 1541, 1826
SacI	GAGCTC	1 cut(s)	288
SapI	GCTCTTC	1 cut(s)	2136
SaqAI	TTAA	1 cut(s)	1161
Sau96I	GGNCC	7 cut(s)	136, 459, 761, 974, 1046, 1508, 1988
ScaI	AGTACT	3 cut(s)	38, 1196, 1731
SchI	GAGTC	1 cut(s)	2152
ScrFI	CCNGG	4 cut(s)	1043, 1044, 1816, 2048
SduI	GDGCHC	5 cut(s)	288, 549, 784, 796, 2044
SfaNI	GCATC	6 cut(s)	337, 382, 456, 520, 1587, 1831
SfcI	CTRYAG	2 cut(s)	1368, 1773
SinI	GGWCC	5 cut(s)	136, 459, 974, 1508, 1988
SmaI	CCCGGG	1 cut(s)	1044
SmiMI	CAYNNNNRTG	3 cut(s)	626, 1541, 1826
SmlI	CTYRAG	2 cut(s)	1379, 1994
SmoI	CTYRAG	2 cut(s)	1379, 1994
Sse9I	AATT	9 cut(s)	226, 441, 1157, 1239, 1282, 1707, 1755, 1883, 1929
SseBI	AGGCCT	1 cut(s)	2070
SsiI	CCGC	5 cut(s)	5, 139, 747, 1104, 1468
SspMI	CTAG	3 cut(s)	275, 339, 1982
SstI	GAGCTC	1 cut(s)	288
StuI	AGGCCT	1 cut(s)	2070
StyD4I	CCNGG	4 cut(s)	1041, 1042, 1814, 2046
StyI	CCWWGG	1 cut(s)	1890
TaaI	ACNGT	9 cut(s)	96, 308, 551, 617, 986, 1520, 1834, 1915, 2098
TaqI	TCGA	5 cut(s)	180, 267, 835, 948, 1483
TasI	AATT	9 cut(s)	226, 441, 1157, 1239, 1282, 1707, 1755, 1883, 1929
TatI	WGTACW	4 cut(s)	36, 183, 1194, 1729
TauI	GCSGC	1 cut(s)	1106
TfiI	GAWTC	2 cut(s)	247, 1205
Tru1I	TTAA	1 cut(s)	1161
Tru9I	TTAA	1 cut(s)	1161
TscAI	CASTG	7 cut(s)	313, 369, 375, 633, 796, 1279, 1523
TseFI	GTSAC	3 cut(s)	986, 1345, 1828
Tsp45I	GTSAC	3 cut(s)	986, 1345, 1828
TspGWI	ACGGA	1 cut(s)	180
TspMI	CCCGGG	1 cut(s)	1042
TspRI	CASTG	7 cut(s)	313, 369, 375, 633, 796, 1279, 1523
Tth111I	GACNNNGTC	1 cut(s)	1004
VpaK11BI	GGWCC	5 cut(s)	136, 459, 974, 1508, 1988
XapI	RAATTY	1 cut(s)	441
XbaI	TCTAGA	1 cut(s)	1981
XceI	RCATGY	2 cut(s)	1343, 1807
XcmI	CCANNNNNNNNNTGG	1 cut(s)	211
XmaI	CCCGGG	1 cut(s)	1042
XmiI	GTMKAC	1 cut(s)	981
XmnI	GAANNNNTTC	1 cut(s)	2130
XspI	CTAG	3 cut(s)	275, 339, 1982
ZrmI	AGTACT	3 cut(s)	38, 1196, 1731
Zsp2I	ATGCAT	2 cut(s)	471, 1122

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.