AT3G06410

nucleic acid binding zinc ion binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0006831
Physical Location & Seq
Reverse (-)
1947012 .. 1949916
2905 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G06410.1

Sequence Viewer

Length: 1389 bp
ATGGAGCGGTACGGTCGCCCCGGTGAAGAAGGGTCGCGATCGGATCCATCTCTTGAATGGACCTCTCATGGTGGTGAAACCGCTGTCGAAGCTCCGATGTGGCGGTTAGGGTTGAGCGGCGGCGGCGGAGGTGGAGGAGGTGGAGAATCGTACCCGGAGAGACCTGACGAGCCTGATTGTATTTATTACTTGAGAACCGGCGTTTGCGGGTACGGGTCAAGATGTCGGTTTAATCACCCACGAGATCGTGGAGCGGTTATTGGAGGTGTGAGAGGAGAAGCTGGAGCTTTACCGGAGAGGATGGGACATCCGGTTTGTCAGCATTTTATGCGAACTGGTACGTGTAAATTCGGTGCTTCTTGCAAGTATCATCATCCTAGGCAAGGAGGTGGTGGTGGTTCCGTTGCGCCTGTCTCGCTAAGTTATTTGGGATATCCATTACGCCCGGGAGAGAAAGAGTGCTCTTATTACTTGAGAACCGGTCAGTGTAAATTTGGTTTGACTTGTAGATTCAACCATCCCGTGCCACTCGCTGTACAGGGTCCACCTCAGCAGCCGCAACAGCAGCAGCCACAGCCACAGCCGCAGCTACAGACTATTTATCCGACACTTCAATCTCAATCTATTCCTTCGTCTCAACAATATGGGTTAGTTTTGACTAGGCCTTCTTTTTTAACTGGTTCATATCTTCAAAGCCCTTACGGTCCTCCAATGGTTCTGCCTCCTGGAATGGTTCCATACTCTGGTTGGAATCCTTACCAGGCTTCTTTAAGTGCAATGCCTTCGCCTGGAACTCAACCGTCTATTGGATCAAGCTCTATTTATGGACTCACGCCGTTATCTCCTTCAGCGACTGCATATACAGGAACATATCAATCTGTGCCTTCTTCAAATTCCACCTCAAAAGAGTTTCCTCAGCGACCTGATCAACCCGAGTGTCAATACTTCATGAGAACTGGTGACTGTAAATTCGGATCTTCGTGTCGATACCATCATCCTGTAGATGCAGTTCCACCTAAGACTGGCATTGTCCTCAGCTCCATTGGCCTTCCACTTCGTCCCGGCGTAGCGCAATGCACTCACTTTGCTCAACACGGAATCTGCAAGTTTGGACCGGCGTGTAAGTTTGATCACTCAATGAGTTCTTCGCTTAGCTACAGTCCGTCTGCATCATCACTAACTGATATGCCCGTGGCGCCATACCCAATCGGATCATCCTCACTCAGCGGCTCATCAGCTCCAGTAAGCTCTAGCAATGAACCCACCAAAGAGGCTGTGACTCCTGCAGTTTCTTCTATGGTCAGTGGCTTGAGCCGTCCTGAGCCAGCTGAGACGAGTGGTGACTCAGCCAGCGTCAGTGGCAGCATAGAAGCTAAGACTTCAAGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0097159 GO:1901363
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-CCCH

Protein Analysis

462

Amino Acids

48.85

Weight (kDa)

8.29

Isoelectric Point (pI)

63.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CCCH PF00642 56 - 81 9.3e-10 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 102 - 127 8.1e-10 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 150 - 174 1.3e-09 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 309 - 333 1.7e-10 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 355 - 380 3.9e-08 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1195
AccB7I CCANNNNNTGG 1 cut(s) 743
AccBSI CCGCTC 3 cut(s) 7, 117, 254
AccII CGCG 1 cut(s) 37
AclWI GGATC 5 cut(s) 38, 51, 817, 982, 1219
AcsI RAATTY 4 cut(s) 347, 491, 892, 968
AcuI CTGAAG 1 cut(s) 831
AcyI GRCGYC 1 cut(s) 1196
AfaI GTAC 5 cut(s) 11, 152, 212, 340, 537
AfiI CCNNNNNNNGG 5 cut(s) 383, 743, 788, 806, 1022
AflIII ACRYGT 1 cut(s) 341
AgeI ACCGGT 1 cut(s) 479
AgsI TTSAA 6 cut(s) 56, 514, 614, 692, 891, 1383
AjnI CCWGG 3 cut(s) 724, 759, 787
Alw21I GWGCWC 1 cut(s) 464
Alw26I GTCTC 4 cut(s) 154, 418, 639, 1325
AlwI GGATC 5 cut(s) 38, 51, 817, 982, 1219
AlwNI CAGNNNCTG 1 cut(s) 854
Ama87I CYCGRG 2 cut(s) 445, 932
AoxI GGCC 2 cut(s) 662, 1045
ApeKI GCWGC 5 cut(s) 553, 565, 568, 586, 1362
ApoI RAATTY 4 cut(s) 347, 491, 892, 968
ArsI GACNNNNNNTTYG 4 cut(s) 297, 329, 953, 985
AsiGI ACCGGT 1 cut(s) 479
AspA2I CCTAGG 1 cut(s) 377
AspLEI GCGC 3 cut(s) 409, 1072, 1198
AspS9I GGNCC 4 cut(s) 60, 542, 704, 1112
AsuC2I CCSGG 5 cut(s) 21, 155, 446, 447, 1062
AsuHPI GGTGA 5 cut(s) 35, 86, 227, 971, 1352
AvaI CYCGRG 2 cut(s) 445, 932
AvaII GGWCC 4 cut(s) 60, 542, 704, 1112
AvrII CCTAGG 1 cut(s) 377
BamHI GGATCC 1 cut(s) 43
BanI GGYRCC 1 cut(s) 1195
BauI CACGAG 1 cut(s) 240
Bbv12I GWGCWC 1 cut(s) 464
BbvCI CCTCAGC 3 cut(s) 549, 915, 1034
BbvI GCAGC 5 cut(s) 565, 577, 580, 598, 1374
BccI CCATC 4 cut(s) 55, 295, 525, 999
BceAI ACGGC 2 cut(s) 820, 1299
BcgI CGANNNNNNTGC 2 cut(s) 765, 799
BciT130I CCWGG 3 cut(s) 726, 761, 789
BclI TGATCA 2 cut(s) 925, 1129
BcnI CCSGG 5 cut(s) 21, 155, 446, 447, 1062
BcoDI GTCTC 4 cut(s) 154, 418, 639, 1325
BfaI CTAG 3 cut(s) 378, 660, 1251
BfmI CTRYAG 4 cut(s) 590, 999, 1156, 1284
BfoI RGCGCY 1 cut(s) 1199
BlnI CCTAGG 1 cut(s) 377
BlpI GCTNAGC 1 cut(s) 1151
Bme1390I CCNGG 8 cut(s) 21, 155, 446, 447, 726, 761, 789, 1062
Bme18I GGWCC 4 cut(s) 60, 542, 704, 1112
BmeT110I CYCGRG 2 cut(s) 445, 932
BmgT120I GGNCC 4 cut(s) 60, 542, 704, 1112
BmiI GGNNCC 5 cut(s) 45, 400, 543, 735, 1197
BmrFI CCNGG 8 cut(s) 21, 155, 446, 447, 726, 761, 789, 1062
BmsI GCATC 2 cut(s) 994, 1178
BpmI CTGGAG 2 cut(s) 303, 1224
Bpu10I CCTNAGC 4 cut(s) 549, 915, 1034, 1320
Bpu1102I GCTNAGC 1 cut(s) 1151
BpuEI CTTGAG 3 cut(s) 211, 493, 1330
BpuMI CCSGG 5 cut(s) 21, 155, 446, 447, 1062
BsaAI YACGTR 1 cut(s) 342
BsaHI GRCGYC 1 cut(s) 1196
BsaI GGTCTC 1 cut(s) 154
BsaJI CCNNGG 4 cut(s) 19, 377, 445, 1191
BsaWI WCCGGW 3 cut(s) 292, 310, 479
Bsc4I CCNNNNNNNGG 5 cut(s) 383, 743, 788, 806, 1022
Bse118I RCCGGY 3 cut(s) 197, 479, 1114
Bse1I ACTGG 5 cut(s) 340, 682, 961, 1027, 1241
Bse3DI GCAATG 3 cut(s) 783, 1079, 1261
BseBI CCWGG 3 cut(s) 726, 761, 789
BseDI CCNNGG 4 cut(s) 19, 377, 445, 1191
BseGI GGATG 6 cut(s) 306, 307, 373, 517, 994, 1214
BseLI CCNNNNNNNGG 5 cut(s) 383, 743, 788, 806, 1022
BseMI GCAATG 3 cut(s) 783, 1079, 1261
BseMII CTCAG 7 cut(s) 563, 929, 1048, 1237, 1311, 1320, 1359
BseNI ACTGG 5 cut(s) 340, 682, 961, 1027, 1241
BseRI GAGGAG 2 cut(s) 150, 288
BseXI GCAGC 5 cut(s) 565, 577, 580, 598, 1374
Bsh1236I CGCG 1 cut(s) 37
Bsh1285I CGRYCG 2 cut(s) 16, 41
BshFI GGCC 2 cut(s) 664, 1047
BshNI GGYRCC 1 cut(s) 1195
BshTI ACCGGT 1 cut(s) 479
BsiEI CGRYCG 2 cut(s) 16, 41
BsiHKAI GWGCWC 1 cut(s) 464
BsiHKCI CYCGRG 2 cut(s) 445, 932
BsiSI CCGG 9 cut(s) 21, 155, 198, 293, 311, 446, 480, 1062, 1115
BslFI GGGAC 2 cut(s) 318, 1044
BslI CCNNNNNNNGG 5 cut(s) 383, 743, 788, 806, 1022
BsmAI GTCTC 4 cut(s) 154, 418, 639, 1325
BsmBI CGTCTC 2 cut(s) 639, 1325
BsmFI GGGAC 2 cut(s) 318, 1044
BsnI GGCC 2 cut(s) 664, 1047
Bso31I GGTCTC 1 cut(s) 154
BsoBI CYCGRG 2 cut(s) 445, 932
Bsp1286I GDGCHC 1 cut(s) 464
Bsp1407I TGTACA 1 cut(s) 535
Bsp143I GATC 8 cut(s) 38, 43, 244, 809, 925, 974, 1129, 1211
Bsp1720I GCTNAGC 1 cut(s) 1151
Bsp68I TCGCGA 1 cut(s) 37
BspANI GGCC 2 cut(s) 664, 1047
BspCNI CTCAG 7 cut(s) 562, 928, 1047, 1236, 1312, 1321, 1358
BspFNI CGCG 1 cut(s) 37
BspHI TCATGA 1 cut(s) 948
BspLI GGNNCC 5 cut(s) 45, 400, 543, 735, 1197
BspMAI CTGCAG 1 cut(s) 1288
BspPI GGATC 5 cut(s) 38, 51, 817, 982, 1219
BspT107I GGYRCC 1 cut(s) 1195
BspTNI GGTCTC 1 cut(s) 154
BsrBI CCGCTC 3 cut(s) 7, 117, 254
BsrDI GCAATG 3 cut(s) 783, 1079, 1261
BsrFI RCCGGY 3 cut(s) 197, 479, 1114
BsrGI TGTACA 1 cut(s) 535
BsrI ACTGG 5 cut(s) 340, 682, 961, 1027, 1241
BssAI RCCGGY 3 cut(s) 197, 479, 1114
BssECI CCNNGG 4 cut(s) 19, 377, 445, 1191
BssMI GATC 8 cut(s) 38, 43, 244, 809, 925, 974, 1129, 1211
BssNI GRCGYC 1 cut(s) 1196
BssSI CACGAG 1 cut(s) 240
BssT1I CCWWGG 1 cut(s) 377
Bst2BI CACGAG 1 cut(s) 240
Bst2UI CCWGG 3 cut(s) 726, 761, 789
Bst4CI ACNGT 5 cut(s) 14, 704, 801, 965, 1160
BstACI GRCGYC 1 cut(s) 1196
BstAPI GCANNNNNTGC 1 cut(s) 328
BstAUI TGTACA 1 cut(s) 535
BstBAI YACGTR 1 cut(s) 342
BstC8I GCNNGC 2 cut(s) 1326, 1351
BstDSI CCRYGG 1 cut(s) 1191
BstENI CCTNNNNNAGG 1 cut(s) 381
BstF5I GGATG 6 cut(s) 306, 307, 373, 517, 994, 1214
BstFNI CGCG 1 cut(s) 37
BstH2I RGCGCY 1 cut(s) 1199
BstHHI GCGC 3 cut(s) 409, 1072, 1198
BstKTI GATC 8 cut(s) 41, 46, 247, 812, 928, 977, 1132, 1214
BstMAI GTCTC 4 cut(s) 154, 418, 639, 1325
BstMBI GATC 8 cut(s) 38, 43, 244, 809, 925, 974, 1129, 1211
BstMCI CGRYCG 2 cut(s) 16, 41
BstNI CCWGG 3 cut(s) 726, 761, 789
BstSCI CCNGG 8 cut(s) 19, 153, 444, 445, 724, 759, 787, 1060
BstSFI CTRYAG 4 cut(s) 590, 999, 1156, 1284
BstUI CGCG 1 cut(s) 37
BstV1I GCAGC 5 cut(s) 565, 577, 580, 598, 1374
BstX2I RGATCY 2 cut(s) 43, 974
BstYI RGATCY 2 cut(s) 43, 974
BsuRI GGCC 2 cut(s) 664, 1047
BtgI CCRYGG 1 cut(s) 1191
BtsCI GGATG 6 cut(s) 306, 307, 373, 517, 994, 1214
BtsIMutI CAGTG 3 cut(s) 491, 1309, 1363
BtuMI TCGCGA 1 cut(s) 37
Cac8I GCNNGC 2 cut(s) 1326, 1351
CaiI CAGNNNCTG 1 cut(s) 854
CciI TCATGA 1 cut(s) 948
CfoI GCGC 3 cut(s) 409, 1072, 1198
Cfr10I RCCGGY 3 cut(s) 197, 479, 1114
Cfr13I GGNCC 4 cut(s) 60, 542, 704, 1112
Cfr9I CCCGGG 1 cut(s) 445
CseI GACGC 1 cut(s) 1342
Csp6I GTAC 5 cut(s) 10, 151, 211, 339, 536
CspAI ACCGGT 1 cut(s) 479
CviAII CATG 2 cut(s) 68, 949
CviQI GTAC 5 cut(s) 10, 151, 211, 339, 536
DinI GGCGCC 1 cut(s) 1197
DpnI GATC 8 cut(s) 40, 45, 246, 811, 927, 976, 1131, 1213
DpnII GATC 8 cut(s) 38, 43, 244, 809, 925, 974, 1129, 1211
EciI GGCGGA 1 cut(s) 141
Eco130I CCWWGG 1 cut(s) 377
Eco147I AGGCCT 1 cut(s) 664
Eco31I GGTCTC 1 cut(s) 154
Eco32I GATATC 1 cut(s) 434
Eco47I GGWCC 4 cut(s) 60, 542, 704, 1112
Eco57I CTGAAG 1 cut(s) 831
Eco88I CYCGRG 2 cut(s) 445, 932
EcoNI CCTNNNNNAGG 1 cut(s) 381
EcoRII CCWGG 3 cut(s) 724, 759, 787
EcoRV GATATC 1 cut(s) 434
EcoT14I CCWWGG 1 cut(s) 377
EgeI GGCGCC 1 cut(s) 1197
EheI GGCGCC 1 cut(s) 1197
ErhI CCWWGG 1 cut(s) 377
Esp3I CGTCTC 2 cut(s) 639, 1325
FaeI CATG 2 cut(s) 71, 952
FaqI GGGAC 2 cut(s) 318, 1044
FatI CATG 2 cut(s) 67, 948
FauI CCCGC 1 cut(s) 200
FbaI TGATCA 2 cut(s) 925, 1129
FokI GGATG 6 cut(s) 294, 313, 360, 504, 981, 1201
FspBI CTAG 3 cut(s) 378, 660, 1251
GlaI GCGC 3 cut(s) 408, 1071, 1197
GsuI CTGGAG 2 cut(s) 303, 1224
HaeII RGCGCY 1 cut(s) 1199
HaeIII GGCC 2 cut(s) 664, 1047
HapII CCGG 9 cut(s) 21, 155, 198, 293, 311, 446, 480, 1062, 1115
HgaI GACGC 1 cut(s) 1342
HhaI GCGC 3 cut(s) 409, 1072, 1198
Hin1I GRCGYC 1 cut(s) 1196
Hin1II CATG 2 cut(s) 71, 952
Hin6I GCGC 3 cut(s) 407, 1070, 1196
HinP1I GCGC 3 cut(s) 407, 1070, 1196
HinfI GANTC 7 cut(s) 146, 510, 751, 828, 1098, 1279, 1343
HpaII CCGG 9 cut(s) 21, 155, 198, 293, 311, 446, 480, 1062, 1115
HphI GGTGA 5 cut(s) 35, 86, 227, 971, 1352
Hpy166II GTNNAC 1 cut(s) 545
Hpy188I TCNGA 5 cut(s) 43, 96, 606, 974, 1211
Hpy188III TCNNGA 5 cut(s) 36, 53, 219, 949, 1319
Hpy8I GTNNAC 1 cut(s) 545
HpyAV CCTTC 7 cut(s) 23, 639, 675, 792, 855, 894, 1058
HpyCH4III ACNGT 5 cut(s) 14, 704, 801, 965, 1160
HpyCH4IV ACGT 1 cut(s) 341
HpyCH4V TGCA 8 cut(s) 363, 776, 857, 1007, 1077, 1104, 1169, 1286
HpySE526I ACGT 1 cut(s) 341
Hsp92I GRCGYC 1 cut(s) 1196
Hsp92II CATG 2 cut(s) 71, 952
HspAI GCGC 3 cut(s) 407, 1070, 1196
KasI GGCGCC 1 cut(s) 1195
Ksp22I TGATCA 2 cut(s) 925, 1129
Kzo9I GATC 8 cut(s) 38, 43, 244, 809, 925, 974, 1129, 1211
LmnI GCTCC 6 cut(s) 4, 97, 251, 284, 1043, 1243
Lsp1109I GCAGC 5 cut(s) 565, 577, 580, 598, 1374
LweI GCATC 2 cut(s) 994, 1178
MaeI CTAG 3 cut(s) 378, 660, 1251
MaeII ACGT 1 cut(s) 341
MaeIII GTNAC 3 cut(s) 959, 1276, 1340
MalI GATC 8 cut(s) 40, 45, 246, 811, 927, 976, 1131, 1213
MbiI CCGCTC 3 cut(s) 7, 117, 254
MboI GATC 8 cut(s) 38, 43, 244, 809, 925, 974, 1129, 1211
MboII GAAGA 6 cut(s) 38, 680, 879, 969, 1137, 1284
MflI RGATCY 2 cut(s) 43, 974
MhlI GDGCHC 1 cut(s) 464
MluCI AATT 4 cut(s) 347, 491, 892, 968
Mly113I GGCGCC 1 cut(s) 1196
MlyI GAGTC 3 cut(s) 822, 1273, 1337
MmeI TCCRAC 2 cut(s) 629, 728
MseI TTAA 4 cut(s) 231, 674, 770, 1387
MslI CAYNNNNRTG 1 cut(s) 72
MspA1I CMGCKG 3 cut(s) 83, 1227, 1328
MspI CCGG 9 cut(s) 21, 155, 198, 293, 311, 446, 480, 1062, 1115
MspR9I CCNGG 8 cut(s) 21, 155, 446, 447, 726, 761, 789, 1062
MvaI CCWGG 3 cut(s) 726, 761, 789
MvnI CGCG 1 cut(s) 37
NarI GGCGCC 1 cut(s) 1196
NciI CCSGG 5 cut(s) 21, 155, 446, 447, 1062
NdeII GATC 8 cut(s) 38, 43, 244, 809, 925, 974, 1129, 1211
NlaIII CATG 2 cut(s) 71, 952
NlaIV GGNNCC 5 cut(s) 45, 400, 543, 735, 1197
NmuCI GTSAC 3 cut(s) 959, 1276, 1340
NruI TCGCGA 1 cut(s) 37
PagI TCATGA 1 cut(s) 948
PceI AGGCCT 1 cut(s) 664
PfeI GAWTC 4 cut(s) 146, 510, 751, 1098
PflMI CCANNNNNTGG 1 cut(s) 743
PfoI TCCNGGA 1 cut(s) 724
PinAI ACCGGT 1 cut(s) 479
Ple19I CGATCG 1 cut(s) 41
PleI GAGTC 3 cut(s) 822, 1273, 1337
PluTI GGCGCC 1 cut(s) 1199
PpsI GAGTC 3 cut(s) 822, 1273, 1337
Ppu21I YACGTR 1 cut(s) 342
Psp6I CCWGG 3 cut(s) 724, 759, 787
PspGI CCWGG 3 cut(s) 724, 759, 787
PspN4I GGNNCC 5 cut(s) 45, 400, 543, 735, 1197
PspPI GGNCC 4 cut(s) 60, 542, 704, 1112
PsrI GAACNNNNNNTAC 2 cut(s) 993, 1025
PstI CTGCAG 1 cut(s) 1288
PstNI CAGNNNCTG 1 cut(s) 854
PsuI RGATCY 2 cut(s) 43, 974
PvuI CGATCG 1 cut(s) 41
PvuII CAGCTG 1 cut(s) 1328
RruI TCGCGA 1 cut(s) 37
RsaI GTAC 5 cut(s) 11, 152, 212, 340, 537
RsaNI GTAC 5 cut(s) 10, 151, 211, 339, 536
RseI CAYNNNNRTG 1 cut(s) 72
SaqAI TTAA 4 cut(s) 231, 674, 770, 1387
Sau3AI GATC 8 cut(s) 38, 43, 244, 809, 925, 974, 1129, 1211
Sau96I GGNCC 4 cut(s) 60, 542, 704, 1112
SchI GAGTC 3 cut(s) 822, 1273, 1337
ScrFI CCNGG 8 cut(s) 21, 155, 446, 447, 726, 761, 789, 1062
SduI GDGCHC 1 cut(s) 464
SfaNI GCATC 2 cut(s) 994, 1178
SfcI CTRYAG 4 cut(s) 590, 999, 1156, 1284
SfoI GGCGCC 1 cut(s) 1197
SinI GGWCC 4 cut(s) 60, 542, 704, 1112
SmaI CCCGGG 1 cut(s) 447
SmiMI CAYNNNNRTG 1 cut(s) 72
SmlI CTYRAG 3 cut(s) 190, 472, 1309
SmoI CTYRAG 3 cut(s) 190, 472, 1309
Sse9I AATT 4 cut(s) 347, 491, 892, 968
SseBI AGGCCT 1 cut(s) 664
SspDI GGCGCC 1 cut(s) 1195
SspMI CTAG 3 cut(s) 378, 660, 1251
StuI AGGCCT 1 cut(s) 664
StyD4I CCNGG 8 cut(s) 19, 153, 444, 445, 724, 759, 787, 1060
StyI CCWWGG 1 cut(s) 377
TaaI ACNGT 5 cut(s) 14, 704, 801, 965, 1160
TaiI ACGT 1 cut(s) 344
TaqI TCGA 2 cut(s) 87, 985
TasI AATT 4 cut(s) 347, 491, 892, 968
TatI WGTACW 1 cut(s) 535
TauI GCSGC 6 cut(s) 120, 123, 126, 559, 586, 1230
TfiI GAWTC 4 cut(s) 146, 510, 751, 1098
Tru1I TTAA 4 cut(s) 231, 674, 770, 1387
Tru9I TTAA 4 cut(s) 231, 674, 770, 1387
TscAI CASTG 3 cut(s) 491, 1309, 1363
TseFI GTSAC 3 cut(s) 959, 1276, 1340
TseI GCWGC 5 cut(s) 553, 565, 568, 586, 1362
Tsp45I GTSAC 3 cut(s) 959, 1276, 1340
TspDTI ATGAA 3 cut(s) 672, 937, 1272
TspGWI ACGGA 3 cut(s) 391, 1110, 1152
TspMI CCCGGG 1 cut(s) 445
TspRI CASTG 3 cut(s) 491, 1309, 1363
Van91I CCANNNNNTGG 1 cut(s) 743
VpaK11BI GGWCC 4 cut(s) 60, 542, 704, 1112
XagI CCTNNNNNAGG 1 cut(s) 381
XapI RAATTY 4 cut(s) 347, 491, 892, 968
XcmI CCANNNNNNNNNTGG 2 cut(s) 54, 744
XmaI CCCGGG 1 cut(s) 445
XmaJI CCTAGG 1 cut(s) 377
XspI CTAG 3 cut(s) 378, 660, 1251
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.