RchiOBHm_Chr4g0421561

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0006831
Physical Location & Seq
Reverse (-)
47199156 .. 47204094
4939 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ39120

Sequence Viewer

Length: 1428 bp
ATGGAGAGGTACGGTCGGAACACGGAAGGGACGCAGTCGGATCCGTCGCCGGAGTGGAGCGGTCCGGGACCGGAAACCGGGCTGGAAGAATCCATGTGGCAGTTGGGCCTCGGACCCGGAGAATCGTACCCGGAACGGCCCGAGGAGGCCGATTGCAGTTACTATCTCAGGACTGGGATTTGTGGCTACGGCTCGAGGTGTCGGTACAATCACCCCCGTGATCGTACTGCGGTTACCGGAGCTCTCAGAGCTGGGGGGGTGGAGTACCCCGAGCGAGTGGGCCAGCCTGTGTGCCAGTATTATATGAGGACGGGGACGTGCAAATTTGGTGCCACTTGTAAGTATCACCATCCTAAGCAAGGAGGAGGCTCTGCGGCCCCTGTATCACTAAATTACTATGGATACCCATTACGACCGGGTGAAAGAGAGTGTTCCTACTATGTGAAAACTGGACAGTGTAAGTTTGGTGCAACTTGTAAATTCCATCATCCACAGCTGACTGGCACACAATCTCAAGTGCCATCACAAGCCCAAGCTTCAATTATACCTGCACCCACATTGTATCAAACTGTGCAAACTCCATCCGTTTCCTCACAGCCCTATGGAACAGTAATGGTTGCAAGGCCTCCTTTGCTACCTAGCTCATACGTTCAAAGCCCCTATGGTCCGATGCTGATTCCCCCTGGAATGGTTCCTTTCTCAGGTTGGAGTCCATATCCGGCTGGTGCAAGCCCATTAGCGTCTCCTAGTACTCAAACCGCTGTTGGTTCAGGGGCACTTTATGGGATAAATCAACTATCTCCTTCAGCGCCTGCATATACAGGAATATTTCCAACTGTACCTTTTTCTCTTGGTCCTCCAACCTCTAGCCAGAAGGAGCAATCTCATCCTGAAAGACCTGGCCAAGCAGAATGTCAGTATTACCTGAGAACAGGGGATTGTAAATTTGGGTCCTCATGTAGATATCATCATCCAGCAGAAGTTGTTGCACCAAATACACCTGTTGTCCTTAGCTCCATTGGTCTTCCGTCGCGCCCGGGTGCACCACTTTGCACTCACTATGCACAACGTGGAGCATGCAAATTCGGGGCTGCATGCAAATTTGACCACCCAATGGGAACACTCAGTTACAGTCCATCAGCGTCTTCTCTCACCGATATGCCAGTTGCCCCCTACCCAGTGGGATCGTCAATTGGTACGCTAGCCCCATCATCGTCATCGTCAGAATTGCGGCCTGAACTTAATTCAGGCACCAGCAAGGACTCAGTTTCTGCCAGAATGTCTTCATCACTGAGCACTGTTAGTGGATCAGTTGGTTCTACTGTTTCTAAGGATGGTGTTGCCCATTTGGGTGGCCAACTGTCTGCTCAGGGTTCTGGCCCTTCACCTACCAGTGACAACAGTACAGAGTGTCATAGTTCAAGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0097159 GO:1901363
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-CCCH

Protein Analysis

475

Amino Acids

50.01

Weight (kDa)

8.08

Isoelectric Point (pI)

61.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CCCH PF00642 48 - 73 2.5e-09 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 95 - 119 3e-10 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 139 - 165 1.8e-09 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 301 - 325 2.8e-09 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 347 - 372 7e-09 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 556
AccB1I GGYRCC 2 cut(s) 329, 1250
AccB7I CCANNNNNTGG 1 cut(s) 1114
AccBSI CCGCTC 1 cut(s) 60
AccII CGCG 1 cut(s) 1033
AciI CCGC 5 cut(s) 60, 230, 374, 759, 1231
AclWI GGATC 4 cut(s) 35, 48, 1192, 1315
AcoI YGGCCR 2 cut(s) 901, 1354
AcsI RAATTY 5 cut(s) 323, 479, 944, 1082, 1100
AcuI CTGAAG 1 cut(s) 789
AdeI CACNNNGTG 1 cut(s) 1070
AfaI GTAC 9 cut(s) 11, 128, 206, 226, 266, 751, 840, 1198, 1405
AfiI CCNNNNNNNGG 5 cut(s) 77, 359, 688, 701, 1114
AgsI TTSAA 3 cut(s) 540, 653, 1422
AjiI CACGTC 1 cut(s) 318
AjnI CCWGG 2 cut(s) 682, 898
AleI CACNNNNGTG 1 cut(s) 216
AluBI AGCT 6 cut(s) 242, 251, 496, 536, 642, 1014
AluI AGCT 6 cut(s) 242, 251, 496, 536, 642, 1014
Alw21I GWGCWC 3 cut(s) 244, 1045, 1298
Alw26I GTCTC 1 cut(s) 747
Alw44I GTGCAC 1 cut(s) 1041
AlwI GGATC 4 cut(s) 35, 48, 1192, 1315
AlwNI CAGNNNCTG 2 cut(s) 812, 1271
Ama87I CYCGRG 4 cut(s) 140, 193, 269, 1036
ApaLI GTGCAC 1 cut(s) 1041
ApeKI GCWGC 1 cut(s) 1091
ApoI RAATTY 5 cut(s) 323, 479, 944, 1082, 1100
Asp700I GAANNNNTTC 1 cut(s) 1282
AspLEI GCGC 2 cut(s) 811, 1035
AsuC2I CCSGG 7 cut(s) 66, 79, 117, 131, 417, 1037, 1038
AsuHPI GGTGA 5 cut(s) 203, 338, 431, 1144, 1377
AsuNHI GCTAGC 1 cut(s) 1201
AvaI CYCGRG 4 cut(s) 140, 193, 269, 1036
AvaII GGWCC 6 cut(s) 62, 68, 113, 665, 854, 951
BaeGI GKGCMC 2 cut(s) 778, 1045
BalI TGGCCA 2 cut(s) 903, 1356
BamHI GGATCC 1 cut(s) 40
BanI GGYRCC 2 cut(s) 329, 1250
BanII GRGCYC 1 cut(s) 244
BbsI GAAGAC 3 cut(s) 1016, 1137, 1275
Bbv12I GWGCWC 3 cut(s) 244, 1045, 1298
BbvI GCAGC 1 cut(s) 1078
BccI CCATC 7 cut(s) 357, 492, 529, 589, 1144, 1216, 1328
BceAI ACGGC 2 cut(s) 152, 205
BciT130I CCWGG 2 cut(s) 684, 900
BciVI GTATCC 1 cut(s) 395
BcnI CCSGG 7 cut(s) 66, 79, 117, 131, 417, 1037, 1038
BcoDI GTCTC 1 cut(s) 747
BfaI CTAG 4 cut(s) 639, 747, 867, 1202
BfoI RGCGCY 1 cut(s) 812
BfuAI ACCTGC 1 cut(s) 556
BfuI GTATCC 1 cut(s) 395
BisI GCNGC 3 cut(s) 375, 1092, 1232
BlsI GCNGC 3 cut(s) 376, 1093, 1233
BmcAI AGTACT 1 cut(s) 751
Bme1390I CCNGG 9 cut(s) 66, 79, 117, 131, 417, 684, 900, 1037, 1038
Bme18I GGWCC 6 cut(s) 62, 68, 113, 665, 854, 951
BmeT110I CYCGRG 4 cut(s) 140, 193, 269, 1036
BmgBI CACGTC 1 cut(s) 318
BmiI GGNNCC 8 cut(s) 42, 69, 115, 331, 378, 693, 952, 1252
BmrFI CCNGG 9 cut(s) 66, 79, 117, 131, 417, 684, 900, 1037, 1038
BmrI ACTGGG 2 cut(s) 183, 1172
BmsI GCATC 1 cut(s) 660
BmtI GCTAGC 1 cut(s) 1205
BmuI ACTGGG 2 cut(s) 183, 1172
BpiI GAAGAC 3 cut(s) 1016, 1137, 1275
Bpu10I CCTNAGC 3 cut(s) 354, 1010, 1368
BpuEI CTTGAG 1 cut(s) 498
BpuMI CCSGG 7 cut(s) 66, 79, 117, 131, 417, 1037, 1038
BsaJI CCNNGG 4 cut(s) 109, 141, 682, 1036
BsaWI WCCGGW 2 cut(s) 70, 236
Bsc4I CCNNNNNNNGG 5 cut(s) 77, 359, 688, 701, 1114
Bse1I ACTGG 7 cut(s) 178, 295, 454, 505, 1163, 1178, 1392
BseBI CCWGG 2 cut(s) 684, 900
BseDI CCNNGG 4 cut(s) 109, 141, 682, 1036
BseGI GGATG 6 cut(s) 349, 487, 581, 886, 970, 1339
BseLI CCNNNNNNNGG 5 cut(s) 77, 359, 688, 701, 1114
BseMII CTCAG 8 cut(s) 181, 259, 714, 917, 1138, 1278, 1283, 1382
BseNI ACTGG 7 cut(s) 178, 295, 454, 505, 1163, 1178, 1392
BseRI GAGGAG 2 cut(s) 158, 378
BseSI GKGCMC 2 cut(s) 778, 1045
BseXI GCAGC 1 cut(s) 1078
BseYI CCCAGC 1 cut(s) 251
BsgI GTGCAG 1 cut(s) 534
Bsh1236I CGCG 1 cut(s) 1033
Bsh1285I CGRYCG 2 cut(s) 16, 416
BshNI GGYRCC 2 cut(s) 329, 1250
BsiEI CGRYCG 2 cut(s) 16, 416
BsiHKAI GWGCWC 3 cut(s) 244, 1045, 1298
BsiHKCI CYCGRG 4 cut(s) 140, 193, 269, 1036
BslFI GGGAC 3 cut(s) 43, 81, 328
BslI CCNNNNNNNGG 5 cut(s) 77, 359, 688, 701, 1114
BsmAI GTCTC 1 cut(s) 747
BsmBI CGTCTC 1 cut(s) 747
BsmFI GGGAC 3 cut(s) 43, 81, 328
BsoBI CYCGRG 4 cut(s) 140, 193, 269, 1036
Bsp1286I GDGCHC 4 cut(s) 244, 778, 1045, 1298
Bsp143I GATC 4 cut(s) 40, 220, 1184, 1307
BspACI CCGC 5 cut(s) 60, 230, 374, 759, 1231
BspCNI CTCAG 8 cut(s) 180, 258, 713, 918, 1137, 1277, 1284, 1381
BspFNI CGCG 1 cut(s) 1033
BspLI GGNNCC 8 cut(s) 42, 69, 115, 331, 378, 693, 952, 1252
BspMI ACCTGC 1 cut(s) 556
BspOI GCTAGC 1 cut(s) 1205
BspPI GGATC 4 cut(s) 35, 48, 1192, 1315
BspT107I GGYRCC 2 cut(s) 329, 1250
BsrBI CCGCTC 1 cut(s) 60
BsrI ACTGG 7 cut(s) 178, 295, 454, 505, 1163, 1178, 1392
BssECI CCNNGG 4 cut(s) 109, 141, 682, 1036
BssMI GATC 4 cut(s) 40, 220, 1184, 1307
Bst2UI CCWGG 2 cut(s) 684, 900
BstC8I GCNNGC 6 cut(s) 284, 730, 813, 1078, 1096, 1203
BstEII GGTNACC 1 cut(s) 232
BstENI CCTNNNNNAGG 2 cut(s) 357, 699
BstF5I GGATG 6 cut(s) 349, 487, 581, 886, 970, 1339
BstFNI CGCG 1 cut(s) 1033
BstH2I RGCGCY 1 cut(s) 812
BstHHI GCGC 2 cut(s) 811, 1035
BstKTI GATC 4 cut(s) 43, 223, 1187, 1310
BstMAI GTCTC 1 cut(s) 747
BstMBI GATC 4 cut(s) 40, 220, 1184, 1307
BstMCI CGRYCG 2 cut(s) 16, 416
BstMWI GCNNNNNNNGC 2 cut(s) 248, 631
BstNI CCWGG 2 cut(s) 684, 900
BstNSI RCATGY 2 cut(s) 1080, 1098
BstPI GGTNACC 1 cut(s) 232
BstSCI CCNGG 9 cut(s) 64, 77, 115, 129, 415, 682, 898, 1035, 1036
BstSLI GKGCMC 2 cut(s) 778, 1045
BstUI CGCG 1 cut(s) 1033
BstV1I GCAGC 1 cut(s) 1078
BstV2I GAAGAC 3 cut(s) 1016, 1137, 1275
BstX2I RGATCY 1 cut(s) 40
BstXI CCANNNNNNTGG 1 cut(s) 1352
BstYI RGATCY 1 cut(s) 40
BsuI GTATCC 1 cut(s) 395
BtrI CACGTC 1 cut(s) 318
BtsCI GGATG 6 cut(s) 349, 487, 581, 886, 970, 1339
BtsIMutI CAGTG 5 cut(s) 461, 1185, 1289, 1296, 1399
BveI ACCTGC 1 cut(s) 556
Cac8I GCNNGC 6 cut(s) 284, 730, 813, 1078, 1096, 1203
CaiI CAGNNNCTG 2 cut(s) 812, 1271
CfoI GCGC 2 cut(s) 811, 1035
Cfr9I CCCGGG 1 cut(s) 1036
CpoI CGGWCCG 1 cut(s) 62
CseI GACGC 3 cut(s) 40, 729, 1131
Csp6I GTAC 9 cut(s) 10, 127, 205, 225, 265, 750, 839, 1197, 1404
CspI CGGWCCG 1 cut(s) 62
CviAII CATG 4 cut(s) 94, 957, 1077, 1095
CviQI GTAC 9 cut(s) 10, 127, 205, 225, 265, 750, 839, 1197, 1404
DpnI GATC 4 cut(s) 42, 222, 1186, 1309
DpnII GATC 4 cut(s) 40, 220, 1184, 1307
DraIII CACNNNGTG 1 cut(s) 1070
EaeI YGGCCR 2 cut(s) 901, 1354
Ecl136II GAGCTC 1 cut(s) 242
Eco147I AGGCCT 1 cut(s) 625
Eco24I GRGCYC 1 cut(s) 244
Eco32I GATATC 1 cut(s) 965
Eco47I GGWCC 6 cut(s) 62, 68, 113, 665, 854, 951
Eco53kI GAGCTC 1 cut(s) 242
Eco57I CTGAAG 1 cut(s) 789
Eco88I CYCGRG 4 cut(s) 140, 193, 269, 1036
Eco91I GGTNACC 1 cut(s) 232
EcoICRI GAGCTC 1 cut(s) 242
EcoNI CCTNNNNNAGG 2 cut(s) 357, 699
EcoO109I RGGNCCY 1 cut(s) 951
EcoO65I GGTNACC 1 cut(s) 232
EcoRII CCWGG 2 cut(s) 682, 898
EcoRV GATATC 1 cut(s) 965
EcoT38I GRGCYC 1 cut(s) 244
Esp3I CGTCTC 1 cut(s) 747
FaeI CATG 4 cut(s) 97, 960, 1080, 1098
FalI AAGNNNNNCTT 2 cut(s) 613, 645
FaqI GGGAC 3 cut(s) 43, 81, 328
FatI CATG 4 cut(s) 93, 956, 1076, 1094
Fnu4HI GCNGC 3 cut(s) 375, 1092, 1232
FokI GGATG 6 cut(s) 336, 474, 568, 873, 957, 1346
FriOI GRGCYC 1 cut(s) 244
Fsp4HI GCNGC 3 cut(s) 375, 1092, 1232
FspBI CTAG 4 cut(s) 639, 747, 867, 1202
GlaI GCGC 2 cut(s) 810, 1034
GluI GCNGC 3 cut(s) 375, 1092, 1232
GsaI CCCAGC 1 cut(s) 255
HaeII RGCGCY 1 cut(s) 812
HgaI GACGC 3 cut(s) 40, 729, 1131
HhaI GCGC 2 cut(s) 811, 1035
Hin1II CATG 4 cut(s) 97, 960, 1080, 1098
Hin6I GCGC 2 cut(s) 809, 1033
HinP1I GCGC 2 cut(s) 809, 1033
HindIII AAGCTT 1 cut(s) 534
HinfI GANTC 5 cut(s) 89, 122, 676, 709, 1262
HphI GGTGA 5 cut(s) 203, 338, 431, 1144, 1377
Hpy166II GTNNAC 1 cut(s) 1043
Hpy188I TCNGA 6 cut(s) 18, 40, 113, 248, 669, 1225
Hpy188III TCNNGA 2 cut(s) 169, 890
Hpy8I GTNNAC 1 cut(s) 1043
Hpy99I CGWCG 2 cut(s) 49, 1033
HpyAV CCTTC 4 cut(s) 20, 813, 868, 1392
HpyCH4IV ACGT 3 cut(s) 317, 648, 1069
HpyF10VI GCNNNNNNNGC 2 cut(s) 248, 631
HpySE526I ACGT 3 cut(s) 317, 648, 1069
Hsp92II CATG 4 cut(s) 97, 960, 1080, 1098
HspAI GCGC 2 cut(s) 809, 1033
Kzo9I GATC 4 cut(s) 40, 220, 1184, 1307
LmnI GCTCC 5 cut(s) 57, 239, 877, 1019, 1073
Lsp1109I GCAGC 1 cut(s) 1078
LweI GCATC 1 cut(s) 660
MaeI CTAG 4 cut(s) 639, 747, 867, 1202
MaeII ACGT 3 cut(s) 317, 648, 1069
MaeIII GTNAC 4 cut(s) 158, 232, 1127, 1394
MalI GATC 4 cut(s) 42, 222, 1186, 1309
MbiI CCGCTC 1 cut(s) 60
MboI GATC 4 cut(s) 40, 220, 1184, 1307
MboII GAAGA 4 cut(s) 98, 1016, 1137, 1275
MfeI CAATTG 1 cut(s) 1191
MflI RGATCY 1 cut(s) 40
MhlI GDGCHC 4 cut(s) 244, 778, 1045, 1298
MlsI TGGCCA 2 cut(s) 903, 1356
MluNI TGGCCA 2 cut(s) 903, 1356
MlyI GAGTC 2 cut(s) 718, 1256
MmeI TCCRAC 4 cut(s) 18, 686, 857, 884
Mox20I TGGCCA 2 cut(s) 903, 1356
MroXI GAANNNNTTC 1 cut(s) 1282
MscI TGGCCA 2 cut(s) 903, 1356
MseI TTAA 2 cut(s) 1242, 1426
MslI CAYNNNNRTG 3 cut(s) 216, 1157, 1350
Msp20I TGGCCA 2 cut(s) 903, 1356
MspA1I CMGCKG 2 cut(s) 496, 761
MspR9I CCNGG 9 cut(s) 66, 79, 117, 131, 417, 684, 900, 1037, 1038
MunI CAATTG 1 cut(s) 1191
MvaI CCWGG 2 cut(s) 684, 900
MvnI CGCG 1 cut(s) 1033
MwoI GCNNNNNNNGC 2 cut(s) 248, 631
NciI CCSGG 7 cut(s) 66, 79, 117, 131, 417, 1037, 1038
NdeII GATC 4 cut(s) 40, 220, 1184, 1307
NheI GCTAGC 1 cut(s) 1201
NlaIII CATG 4 cut(s) 97, 960, 1080, 1098
NlaIV GGNNCC 8 cut(s) 42, 69, 115, 331, 378, 693, 952, 1252
NmuCI GTSAC 1 cut(s) 1394
NspI RCATGY 2 cut(s) 1080, 1098
OliI CACNNNNGTG 1 cut(s) 216
PaeI GCATGC 2 cut(s) 1080, 1098
PaeR7I CTCGAG 1 cut(s) 193
PceI AGGCCT 1 cut(s) 625
PdmI GAANNNNTTC 1 cut(s) 1282
PfeI GAWTC 3 cut(s) 89, 122, 676
PflFI GACNNNGTC 1 cut(s) 34
PflMI CCANNNNNTGG 1 cut(s) 1114
PfoI TCCNGGA 1 cut(s) 64
PkrI GCNGC 3 cut(s) 376, 1093, 1233
PleI GAGTC 2 cut(s) 717, 1256
PpsI GAGTC 2 cut(s) 717, 1256
PpuMI RGGWCCY 1 cut(s) 951
Psp124BI GAGCTC 1 cut(s) 244
Psp5II RGGWCCY 1 cut(s) 951
Psp6I CCWGG 2 cut(s) 682, 898
PspEI GGTNACC 1 cut(s) 232
PspFI CCCAGC 1 cut(s) 251
PspGI CCWGG 2 cut(s) 682, 898
PspN4I GGNNCC 8 cut(s) 42, 69, 115, 331, 378, 693, 952, 1252
PspPPI RGGWCCY 1 cut(s) 951
PspXI VCTCGAGB 1 cut(s) 193
PstNI CAGNNNCTG 2 cut(s) 812, 1271
PsuI RGATCY 1 cut(s) 40
PsyI GACNNNGTC 1 cut(s) 34
PvuII CAGCTG 1 cut(s) 496
RsaI GTAC 9 cut(s) 11, 128, 206, 226, 266, 751, 840, 1198, 1405
RsaNI GTAC 9 cut(s) 10, 127, 205, 225, 265, 750, 839, 1197, 1404
RseI CAYNNNNRTG 3 cut(s) 216, 1157, 1350
Rsr2I CGGWCCG 1 cut(s) 62
RsrII CGGWCCG 1 cut(s) 62
SacI GAGCTC 1 cut(s) 244
SaqAI TTAA 2 cut(s) 1242, 1426
SatI GCNGC 3 cut(s) 375, 1092, 1232
Sau3AI GATC 4 cut(s) 40, 220, 1184, 1307
ScaI AGTACT 1 cut(s) 751
SchI GAGTC 2 cut(s) 718, 1256
ScrFI CCNGG 9 cut(s) 66, 79, 117, 131, 417, 684, 900, 1037, 1038
SduI GDGCHC 4 cut(s) 244, 778, 1045, 1298
SfaNI GCATC 1 cut(s) 660
Sfr274I CTCGAG 1 cut(s) 193
SinI GGWCC 6 cut(s) 62, 68, 113, 665, 854, 951
SlaI CTCGAG 1 cut(s) 193
SmaI CCCGGG 1 cut(s) 1038
SmiMI CAYNNNNRTG 3 cut(s) 216, 1157, 1350
SmlI CTYRAG 2 cut(s) 193, 513
SmoI CTYRAG 2 cut(s) 193, 513
SphI GCATGC 2 cut(s) 1080, 1098
SseBI AGGCCT 1 cut(s) 625
SsiI CCGC 5 cut(s) 60, 230, 374, 759, 1231
SspI AATATT 1 cut(s) 828
SspMI CTAG 4 cut(s) 639, 747, 867, 1202
SstI GAGCTC 1 cut(s) 244
StuI AGGCCT 1 cut(s) 625
StyD4I CCNGG 9 cut(s) 64, 77, 115, 129, 415, 682, 898, 1035, 1036
TaiI ACGT 3 cut(s) 320, 651, 1072
TaqI TCGA 1 cut(s) 194
TatI WGTACW 2 cut(s) 749, 1403
TauI GCSGC 2 cut(s) 377, 1234
TfiI GAWTC 3 cut(s) 89, 122, 676
Tru1I TTAA 2 cut(s) 1242, 1426
Tru9I TTAA 2 cut(s) 1242, 1426
TscAI CASTG 5 cut(s) 461, 1185, 1296, 1303, 1399
TseFI GTSAC 1 cut(s) 1394
TseI GCWGC 1 cut(s) 1091
Tsp45I GTSAC 1 cut(s) 1394
TspDTI ATGAA 1 cut(s) 1275
TspGWI ACGGA 4 cut(s) 33, 38, 574, 1017
TspMI CCCGGG 1 cut(s) 1036
TspRI CASTG 5 cut(s) 461, 1185, 1296, 1303, 1399
Tth111I GACNNNGTC 1 cut(s) 34
Van91I CCANNNNNTGG 1 cut(s) 1114
VneI GTGCAC 1 cut(s) 1041
VpaK11BI GGWCC 6 cut(s) 62, 68, 113, 665, 854, 951
XagI CCTNNNNNAGG 2 cut(s) 357, 699
XapI RAATTY 5 cut(s) 323, 479, 944, 1082, 1100
XceI RCATGY 2 cut(s) 1080, 1098
XcmI CCANNNNNNNNNTGG 1 cut(s) 100
XhoI CTCGAG 1 cut(s) 193
XmaI CCCGGG 1 cut(s) 1036
XmnI GAANNNNTTC 1 cut(s) 1282
XspI CTAG 4 cut(s) 639, 747, 867, 1202
ZrmI AGTACT 1 cut(s) 751
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.