zinc finger CCCH domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G06410 AT5G18550 AT5G18550 AT5G18550 AT5G18550 |
| fragaria_vesca | FvH4_4g17640 |
| malus_domestica | MD13G1171100.v1.1 MD16G1172700.v1.1 |
| prunus_persica | Prupe.1G139500_v2.0.a1 |
| pyrus_communis | pycom13g14660 pycom16g14480 |
| rosa_chinensis | RchiOBHm_Chr4g0421561 |
| rosa_laevigata | RLG00000007667 |
| rosa_multiflora | Rmu_co8141282.1_g000001 Rmu_co8301593.1_g000001 Rmu_sc0010734.1_g000006 |
| rosa_roxburghii | Rroxscaffold_5G00363810 |
| rosa_rugosa | Rorug04G0172800 Rorug04G0172900 Rorug04G0173000 |
| rosa_samantha | Rh3AG118900 Rh4AG233200 Rh4BG235900 Rh4CG247500 Rh4DG231800 |
| rosa_wichuraiana | Rw4G020090 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 733 |
| Acc36I | ACCTGC | 2 cut(s) | 559, 733 |
| AccB1I | GGYRCC | 1 cut(s) | 721 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1120 |
| AccBSI | CCGCTC | 2 cut(s) | 7, 278 |
| AccII | CGCG | 1 cut(s) | 1039 |
| AciI | CCGC | 4 cut(s) | 7, 230, 278, 1243 |
| AclWI | GGATC | 3 cut(s) | 35, 1198, 1327 |
| AcsI | RAATTY | 4 cut(s) | 323, 479, 950, 1106 |
| AcuI | CTGAAG | 1 cut(s) | 789 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 27, 77, 78, 201, 359, 701, 764, 1120 |
| AgsI | TTSAA | 4 cut(s) | 653, 1332, 1370, 1398 |
| AjnI | CCWGG | 5 cut(s) | 250, 682, 700, 757, 904 |
| AluBI | AGCT | 6 cut(s) | 242, 369, 500, 812, 1252, 1437 |
| AluI | AGCT | 6 cut(s) | 242, 369, 500, 812, 1252, 1437 |
| Alw21I | GWGCWC | 3 cut(s) | 888, 1051, 1310 |
| Alw26I | GTCTC | 3 cut(s) | 140, 241, 1428 |
| Alw44I | GTGCAC | 1 cut(s) | 1047 |
| AlwI | GGATC | 3 cut(s) | 35, 1198, 1327 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 812, 1265 |
| Ama87I | CYCGRG | 2 cut(s) | 116, 1042 |
| AoxI | GGCC | 5 cut(s) | 280, 623, 1094, 1244, 1390 |
| ApaLI | GTGCAC | 1 cut(s) | 1047 |
| ApeKI | GCWGC | 5 cut(s) | 242, 554, 809, 812, 1410 |
| ApoI | RAATTY | 4 cut(s) | 323, 479, 950, 1106 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1294 |
| AspLEI | GCGC | 2 cut(s) | 734, 1041 |
| AspS9I | GGNCC | 8 cut(s) | 18, 68, 113, 280, 957, 995, 1094, 1391 |
| AsuC2I | CCSGG | 7 cut(s) | 66, 117, 118, 196, 639, 1043, 1044 |
| AsuHPI | GGTGA | 4 cut(s) | 431, 516, 534, 968 |
| AsuNHI | GCTAGC | 1 cut(s) | 1207 |
| AvaI | CYCGRG | 2 cut(s) | 116, 1042 |
| AvaII | GGWCC | 5 cut(s) | 18, 68, 113, 957, 995 |
| AxyI | CCTNAGG | 1 cut(s) | 534 |
| BaeGI | GKGCMC | 1 cut(s) | 1051 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 548, 581 |
| BanI | GGYRCC | 1 cut(s) | 721 |
| BanII | GRGCYC | 1 cut(s) | 111 |
| BauI | CACGAG | 1 cut(s) | 216 |
| BbsI | GAAGAC | 4 cut(s) | 854, 1022, 1143, 1287 |
| Bbv12I | GWGCWC | 3 cut(s) | 888, 1051, 1310 |
| BbvCI | CCTCAGC | 1 cut(s) | 1016 |
| BbvI | GCAGC | 5 cut(s) | 229, 541, 799, 821, 1422 |
| BccI | CCATC | 7 cut(s) | 357, 492, 529, 592, 1122, 1150, 1222 |
| BceAI | ACGGC | 1 cut(s) | 205 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1065, 1099 |
| BciT130I | CCWGG | 5 cut(s) | 252, 684, 702, 759, 906 |
| BciVI | GTATCC | 1 cut(s) | 395 |
| BcnI | CCSGG | 7 cut(s) | 66, 117, 118, 196, 639, 1043, 1044 |
| BcoDI | GTCTC | 3 cut(s) | 140, 241, 1428 |
| BfaI | CTAG | 4 cut(s) | 747, 1208, 1314, 1401 |
| BfuAI | ACCTGC | 2 cut(s) | 559, 733 |
| BfuI | GTATCC | 1 cut(s) | 395 |
| BisI | GCNGC | 6 cut(s) | 243, 555, 810, 813, 1244, 1411 |
| BlsI | GCNGC | 6 cut(s) | 244, 556, 811, 814, 1245, 1412 |
| BmcAI | AGTACT | 2 cut(s) | 299, 751 |
| Bme18I | GGWCC | 5 cut(s) | 18, 68, 113, 957, 995 |
| BmeT110I | CYCGRG | 2 cut(s) | 116, 1042 |
| BmgT120I | GGNCC | 8 cut(s) | 18, 68, 113, 280, 957, 995, 1094, 1391 |
| BmiI | GGNNCC | 6 cut(s) | 69, 70, 115, 193, 723, 958 |
| BmrI | ACTGGG | 3 cut(s) | 183, 1017, 1178 |
| BmtI | GCTAGC | 1 cut(s) | 1211 |
| BmuI | ACTGGG | 3 cut(s) | 183, 1017, 1178 |
| BpiI | GAAGAC | 4 cut(s) | 854, 1022, 1143, 1287 |
| BpmI | CTGGAG | 1 cut(s) | 273 |
| Bpu10I | CCTNAGC | 4 cut(s) | 354, 1016, 1248, 1380 |
| BpuEI | CTTGAG | 1 cut(s) | 187 |
| BpuMI | CCSGG | 7 cut(s) | 66, 117, 118, 196, 639, 1043, 1044 |
| BsaI | GGTCTC | 2 cut(s) | 140, 241 |
| BsaJI | CCNNGG | 4 cut(s) | 116, 117, 682, 1042 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 27, 77, 78, 201, 359, 701, 764, 1120 |
| Bse1I | ACTGG | 7 cut(s) | 178, 295, 454, 515, 1023, 1169, 1184 |
| Bse21I | CCTNAGG | 1 cut(s) | 534 |
| Bse3DI | GCAATG | 1 cut(s) | 734 |
| BseBI | CCWGG | 5 cut(s) | 252, 684, 702, 759, 906 |
| BseDI | CCNNGG | 4 cut(s) | 116, 117, 682, 1042 |
| BseGI | GGATG | 8 cut(s) | 211, 349, 487, 792, 1114, 1217, 1223, 1229 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 27, 77, 78, 201, 359, 701, 764, 1120 |
| BseMI | GCAATG | 1 cut(s) | 734 |
| BseMII | CTCAG | 6 cut(s) | 548, 1030, 1144, 1239, 1295, 1394 |
| BseNI | ACTGG | 7 cut(s) | 178, 295, 454, 515, 1023, 1169, 1184 |
| BseRI | GAGGAG | 1 cut(s) | 1092 |
| BseSI | GKGCMC | 1 cut(s) | 1051 |
| BseXI | GCAGC | 5 cut(s) | 229, 541, 799, 821, 1422 |
| BsgI | GTGCAG | 1 cut(s) | 540 |
| Bsh1236I | CGCG | 1 cut(s) | 1039 |
| Bsh1285I | CGRYCG | 1 cut(s) | 16 |
| BshFI | GGCC | 5 cut(s) | 282, 625, 1096, 1246, 1392 |
| BshNI | GGYRCC | 1 cut(s) | 721 |
| BsiEI | CGRYCG | 1 cut(s) | 16 |
| BsiHKAI | GWGCWC | 3 cut(s) | 888, 1051, 1310 |
| BsiHKCI | CYCGRG | 2 cut(s) | 116, 1042 |
| BsiSI | CCGG | 6 cut(s) | 50, 65, 117, 196, 638, 1043 |
| BslFI | GGGAC | 3 cut(s) | 81, 328, 787 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 27, 77, 78, 201, 359, 701, 764, 1120 |
| BsmAI | GTCTC | 3 cut(s) | 140, 241, 1428 |
| BsmFI | GGGAC | 3 cut(s) | 81, 328, 787 |
| BsnI | GGCC | 5 cut(s) | 282, 625, 1096, 1246, 1392 |
| Bso31I | GGTCTC | 2 cut(s) | 140, 241 |
| BsoBI | CYCGRG | 2 cut(s) | 116, 1042 |
| Bsp1286I | GDGCHC | 4 cut(s) | 111, 888, 1051, 1310 |
| Bsp143I | GATC | 4 cut(s) | 40, 220, 1190, 1319 |
| BspACI | CCGC | 4 cut(s) | 7, 230, 278, 1243 |
| BspANI | GGCC | 5 cut(s) | 282, 625, 1096, 1246, 1392 |
| BspCNI | CTCAG | 6 cut(s) | 547, 1029, 1143, 1240, 1296, 1393 |
| BspFNI | CGCG | 1 cut(s) | 1039 |
| BspLI | GGNNCC | 6 cut(s) | 69, 70, 115, 193, 723, 958 |
| BspMI | ACCTGC | 2 cut(s) | 559, 733 |
| BspOI | GCTAGC | 1 cut(s) | 1211 |
| BspPI | GGATC | 3 cut(s) | 35, 1198, 1327 |
| BspT107I | GGYRCC | 1 cut(s) | 721 |
| BspTNI | GGTCTC | 2 cut(s) | 140, 241 |
| BsrBI | CCGCTC | 2 cut(s) | 7, 278 |
| BsrDI | GCAATG | 1 cut(s) | 734 |
| BsrI | ACTGG | 7 cut(s) | 178, 295, 454, 515, 1023, 1169, 1184 |
| BssECI | CCNNGG | 4 cut(s) | 116, 117, 682, 1042 |
| BssMI | GATC | 4 cut(s) | 40, 220, 1190, 1319 |
| BssSI | CACGAG | 1 cut(s) | 216 |
| Bst2BI | CACGAG | 1 cut(s) | 216 |
| Bst2UI | CCWGG | 5 cut(s) | 252, 684, 702, 759, 906 |
| Bst4CI | ACNGT | 9 cut(s) | 14, 36, 61, 456, 574, 1009, 1179, 1336, 1374 |
| Bst6I | CTCTTC | 1 cut(s) | 81 |
| BstC8I | GCNNGC | 9 cut(s) | 276, 280, 284, 498, 502, 730, 1098, 1102, 1209 |
| BstDEI | CTNAG | 9 cut(s) | 354, 534, 1016, 1130, 1248, 1276, 1304, 1341, 1380 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 699 |
| BstF5I | GGATG | 8 cut(s) | 211, 349, 487, 792, 1114, 1217, 1223, 1229 |
| BstFNI | CGCG | 1 cut(s) | 1039 |
| BstHHI | GCGC | 2 cut(s) | 734, 1041 |
| BstKTI | GATC | 4 cut(s) | 43, 223, 1193, 1322 |
| BstMAI | GTCTC | 3 cut(s) | 140, 241, 1428 |
| BstMBI | GATC | 4 cut(s) | 40, 220, 1190, 1319 |
| BstMCI | CGRYCG | 1 cut(s) | 16 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 106, 375, 631, 1249, 1410 |
| BstNI | CCWGG | 5 cut(s) | 252, 684, 702, 759, 906 |
| BstNSI | RCATGY | 1 cut(s) | 1104 |
| BstSLI | GKGCMC | 1 cut(s) | 1051 |
| BstUI | CGCG | 1 cut(s) | 1039 |
| BstV1I | GCAGC | 5 cut(s) | 229, 541, 799, 821, 1422 |
| BstV2I | GAAGAC | 4 cut(s) | 854, 1022, 1143, 1287 |
| Bsu36I | CCTNAGG | 1 cut(s) | 534 |
| BsuI | GTATCC | 1 cut(s) | 395 |
| BsuRI | GGCC | 5 cut(s) | 282, 625, 1096, 1246, 1392 |
| BtgZI | GCGATG | 1 cut(s) | 579 |
| BtsCI | GGATG | 8 cut(s) | 211, 349, 487, 792, 1114, 1217, 1223, 1229 |
| BtsI | GCAGTG | 1 cut(s) | 1411 |
| BtsIMutI | CAGTG | 6 cut(s) | 461, 522, 1030, 1191, 1301, 1411 |
| BveI | ACCTGC | 2 cut(s) | 559, 733 |
| Cac8I | GCNNGC | 9 cut(s) | 276, 280, 284, 498, 502, 730, 1098, 1102, 1209 |
| CaiI | CAGNNNCTG | 2 cut(s) | 812, 1265 |
| CfoI | GCGC | 2 cut(s) | 734, 1041 |
| Cfr13I | GGNCC | 8 cut(s) | 18, 68, 113, 280, 957, 995, 1094, 1391 |
| Cfr9I | CCCGGG | 2 cut(s) | 116, 1042 |
| CseI | GACGC | 1 cut(s) | 1137 |
| CsiI | ACCWGGT | 2 cut(s) | 757, 904 |
| CviAII | CATG | 4 cut(s) | 94, 931, 963, 1101 |
| DdeI | CTNAG | 9 cut(s) | 354, 534, 1016, 1130, 1248, 1276, 1304, 1341, 1380 |
| DpnI | GATC | 4 cut(s) | 42, 222, 1192, 1321 |
| DpnII | GATC | 4 cut(s) | 40, 220, 1190, 1319 |
| Eam1104I | CTCTTC | 1 cut(s) | 81 |
| EarI | CTCTTC | 1 cut(s) | 81 |
| Eco147I | AGGCCT | 1 cut(s) | 625 |
| Eco24I | GRGCYC | 1 cut(s) | 111 |
| Eco31I | GGTCTC | 2 cut(s) | 140, 241 |
| Eco32I | GATATC | 1 cut(s) | 971 |
| Eco47I | GGWCC | 5 cut(s) | 18, 68, 113, 957, 995 |
| Eco57I | CTGAAG | 1 cut(s) | 789 |
| Eco81I | CCTNAGG | 1 cut(s) | 534 |
| Eco88I | CYCGRG | 2 cut(s) | 116, 1042 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 699 |
| EcoO109I | RGGNCCY | 2 cut(s) | 68, 957 |
| EcoRII | CCWGG | 5 cut(s) | 250, 682, 700, 757, 904 |
| EcoRV | GATATC | 1 cut(s) | 971 |
| EcoT38I | GRGCYC | 1 cut(s) | 111 |
| FaeI | CATG | 4 cut(s) | 97, 934, 966, 1104 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 613, 645, 660, 692, 872, 904 |
| FaqI | GGGAC | 3 cut(s) | 81, 328, 787 |
| FatI | CATG | 4 cut(s) | 93, 930, 962, 1100 |
| FauI | CCCGC | 1 cut(s) | 271 |
| FauNDI | CATATG | 1 cut(s) | 646 |
| Fnu4HI | GCNGC | 6 cut(s) | 243, 555, 810, 813, 1244, 1411 |
| FokI | GGATG | 8 cut(s) | 198, 336, 474, 799, 1101, 1204, 1210, 1216 |
| FriOI | GRGCYC | 1 cut(s) | 111 |
| Fsp4HI | GCNGC | 6 cut(s) | 243, 555, 810, 813, 1244, 1411 |
| FspBI | CTAG | 4 cut(s) | 747, 1208, 1314, 1401 |
| GlaI | GCGC | 2 cut(s) | 733, 1040 |
| GluI | GCNGC | 6 cut(s) | 243, 555, 810, 813, 1244, 1411 |
| GsuI | CTGGAG | 1 cut(s) | 273 |
| HaeIII | GGCC | 5 cut(s) | 282, 625, 1096, 1246, 1392 |
| HapII | CCGG | 6 cut(s) | 50, 65, 117, 196, 638, 1043 |
| HgaI | GACGC | 1 cut(s) | 1137 |
| HhaI | GCGC | 2 cut(s) | 734, 1041 |
| Hin1II | CATG | 4 cut(s) | 97, 934, 966, 1104 |
| Hin6I | GCGC | 2 cut(s) | 732, 1039 |
| HinP1I | GCGC | 2 cut(s) | 732, 1039 |
| HincII | GTYRAC | 2 cut(s) | 794, 911 |
| HindII | GTYRAC | 2 cut(s) | 794, 911 |
| HinfI | GANTC | 5 cut(s) | 89, 122, 709, 790, 1421 |
| HpaII | CCGG | 6 cut(s) | 50, 65, 117, 196, 638, 1043 |
| HphI | GGTGA | 4 cut(s) | 431, 516, 534, 968 |
| Hpy166II | GTNNAC | 4 cut(s) | 57, 794, 911, 1049 |
| Hpy188I | TCNGA | 3 cut(s) | 18, 40, 113 |
| Hpy188III | TCNNGA | 3 cut(s) | 218, 896, 1266 |
| Hpy8I | GTNNAC | 4 cut(s) | 57, 794, 911, 1049 |
| Hpy99I | CGWCG | 1 cut(s) | 49 |
| HpyAV | CCTTC | 6 cut(s) | 20, 813, 858, 874, 1044, 1404 |
| HpyCH4III | ACNGT | 9 cut(s) | 14, 36, 61, 456, 574, 1009, 1179, 1336, 1374 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 106, 375, 631, 1249, 1410 |
| HpyF3I | CTNAG | 9 cut(s) | 354, 534, 1016, 1130, 1248, 1276, 1304, 1341, 1380 |
| Hsp92II | CATG | 4 cut(s) | 97, 934, 966, 1104 |
| HspAI | GCGC | 2 cut(s) | 732, 1039 |
| KflI | GGGWCCC | 1 cut(s) | 68 |
| Kzo9I | GATC | 4 cut(s) | 40, 220, 1190, 1319 |
| LmnI | GCTCC | 4 cut(s) | 4, 197, 239, 883 |
| Lsp1109I | GCAGC | 5 cut(s) | 229, 541, 799, 821, 1422 |
| MabI | ACCWGGT | 2 cut(s) | 757, 904 |
| MaeI | CTAG | 4 cut(s) | 747, 1208, 1314, 1401 |
| MaeIII | GTNAC | 4 cut(s) | 30, 158, 232, 1133 |
| MalI | GATC | 4 cut(s) | 42, 222, 1192, 1321 |
| MbiI | CCGCTC | 2 cut(s) | 7, 278 |
| MboI | GATC | 4 cut(s) | 40, 220, 1190, 1319 |
| MboII | GAAGA | 6 cut(s) | 98, 843, 854, 1022, 1143, 1287 |
| MfeI | CAATTG | 1 cut(s) | 1197 |
| MhlI | GDGCHC | 4 cut(s) | 111, 888, 1051, 1310 |
| MluCI | AATT | 9 cut(s) | 323, 391, 479, 690, 950, 1106, 1197, 1238, 1255 |
| MlyI | GAGTC | 4 cut(s) | 98, 718, 799, 1430 |
| MmeI | TCCRAC | 3 cut(s) | 686, 890, 973 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1294 |
| MseI | TTAA | 1 cut(s) | 1254 |
| MslI | CAYNNNNRTG | 2 cut(s) | 216, 1362 |
| MspA1I | CMGCKG | 2 cut(s) | 500, 812 |
| MspI | CCGG | 6 cut(s) | 50, 65, 117, 196, 638, 1043 |
| MunI | CAATTG | 1 cut(s) | 1197 |
| MvaI | CCWGG | 5 cut(s) | 252, 684, 702, 759, 906 |
| MvnI | CGCG | 1 cut(s) | 1039 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 106, 375, 631, 1249, 1410 |
| NciI | CCSGG | 7 cut(s) | 66, 117, 118, 196, 639, 1043, 1044 |
| NdeI | CATATG | 1 cut(s) | 646 |
| NdeII | GATC | 4 cut(s) | 40, 220, 1190, 1319 |
| NheI | GCTAGC | 1 cut(s) | 1207 |
| NlaIII | CATG | 4 cut(s) | 97, 934, 966, 1104 |
| NlaIV | GGNNCC | 6 cut(s) | 69, 70, 115, 193, 723, 958 |
| NmuCI | GTSAC | 1 cut(s) | 30 |
| NspI | RCATGY | 1 cut(s) | 1104 |
| PaeI | GCATGC | 1 cut(s) | 1104 |
| PaqCI | CACCTGC | 1 cut(s) | 733 |
| PceI | AGGCCT | 1 cut(s) | 625 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 242 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1294 |
| PfeI | GAWTC | 1 cut(s) | 122 |
| PflFI | GACNNNGTC | 1 cut(s) | 906 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1120 |
| PfoI | TCCNGGA | 1 cut(s) | 64 |
| PkrI | GCNGC | 6 cut(s) | 244, 556, 811, 814, 1245, 1412 |
| PleI | GAGTC | 4 cut(s) | 97, 717, 798, 1429 |
| PpsI | GAGTC | 4 cut(s) | 97, 717, 798, 1429 |
| PpuMI | RGGWCCY | 2 cut(s) | 68, 957 |
| Psp5II | RGGWCCY | 2 cut(s) | 68, 957 |
| Psp6I | CCWGG | 5 cut(s) | 250, 682, 700, 757, 904 |
| PspGI | CCWGG | 5 cut(s) | 250, 682, 700, 757, 904 |
| PspN4I | GGNNCC | 6 cut(s) | 69, 70, 115, 193, 723, 958 |
| PspPI | GGNCC | 8 cut(s) | 18, 68, 113, 280, 957, 995, 1094, 1391 |
| PspPPI | RGGWCCY | 2 cut(s) | 68, 957 |
| PstNI | CAGNNNCTG | 2 cut(s) | 812, 1265 |
| PsyI | GACNNNGTC | 1 cut(s) | 906 |
| PvuII | CAGCTG | 2 cut(s) | 500, 812 |
| RseI | CAYNNNNRTG | 2 cut(s) | 216, 1362 |
| SaqAI | TTAA | 1 cut(s) | 1254 |
| SatI | GCNGC | 6 cut(s) | 243, 555, 810, 813, 1244, 1411 |
| Sau3AI | GATC | 4 cut(s) | 40, 220, 1190, 1319 |
| Sau96I | GGNCC | 8 cut(s) | 18, 68, 113, 280, 957, 995, 1094, 1391 |
| ScaI | AGTACT | 2 cut(s) | 299, 751 |
| SchI | GAGTC | 4 cut(s) | 98, 718, 799, 1430 |
| SduI | GDGCHC | 4 cut(s) | 111, 888, 1051, 1310 |
| SexAI | ACCWGGT | 2 cut(s) | 757, 904 |
| SinI | GGWCC | 5 cut(s) | 18, 68, 113, 957, 995 |
| SmaI | CCCGGG | 2 cut(s) | 118, 1044 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 216, 1362 |
| SmlI | CTYRAG | 1 cut(s) | 166 |
| SmoI | CTYRAG | 1 cut(s) | 166 |
| SphI | GCATGC | 1 cut(s) | 1104 |
| Sse9I | AATT | 9 cut(s) | 323, 391, 479, 690, 950, 1106, 1197, 1238, 1255 |
| SseBI | AGGCCT | 1 cut(s) | 625 |
| SsiI | CCGC | 4 cut(s) | 7, 230, 278, 1243 |
| SspMI | CTAG | 4 cut(s) | 747, 1208, 1314, 1401 |
| StuI | AGGCCT | 1 cut(s) | 625 |
| TaaI | ACNGT | 9 cut(s) | 14, 36, 61, 456, 574, 1009, 1179, 1336, 1374 |
| TaqI | TCGA | 1 cut(s) | 1110 |
| TaqII | GACCGA | 1 cut(s) | 164 |
| TasI | AATT | 9 cut(s) | 323, 391, 479, 690, 950, 1106, 1197, 1238, 1255 |
| TatI | WGTACW | 3 cut(s) | 297, 749, 1415 |
| TauI | GCSGC | 1 cut(s) | 1246 |
| TfiI | GAWTC | 1 cut(s) | 122 |
| Tru1I | TTAA | 1 cut(s) | 1254 |
| Tru9I | TTAA | 1 cut(s) | 1254 |
| TscAI | CASTG | 6 cut(s) | 461, 522, 1030, 1191, 1308, 1411 |
| TseFI | GTSAC | 1 cut(s) | 30 |
| TseI | GCWGC | 5 cut(s) | 242, 554, 809, 812, 1410 |
| Tsp45I | GTSAC | 1 cut(s) | 30 |
| TspDTI | ATGAA | 3 cut(s) | 582, 633, 1287 |
| TspGWI | ACGGA | 1 cut(s) | 33 |
| TspMI | CCCGGG | 2 cut(s) | 116, 1042 |
| TspRI | CASTG | 6 cut(s) | 461, 522, 1030, 1191, 1308, 1411 |
| Tth111I | GACNNNGTC | 1 cut(s) | 906 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1120 |
| VneI | GTGCAC | 1 cut(s) | 1047 |
| VpaK11BI | GGWCC | 5 cut(s) | 18, 68, 113, 957, 995 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 699 |
| XapI | RAATTY | 4 cut(s) | 323, 479, 950, 1106 |
| XceI | RCATGY | 1 cut(s) | 1104 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 100 |
| XmaI | CCCGGG | 2 cut(s) | 116, 1042 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1294 |
| XspI | CTAG | 4 cut(s) | 747, 1208, 1314, 1401 |
| ZrmI | AGTACT | 2 cut(s) | 299, 751 |