FvH4_4g17640

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0006831
Physical Location & Seq
Reverse (-)
21528299 .. 21532921
4623 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g17640.t1

Sequence Viewer

Length: 1428 bp
ATGGAGAGGTACGGTCGGAGCACGGAAGGGTCGCAGTCGGATCCGTCGCCGGAGTGGACCGCTCCGGGACCCGAGACTGGCCTCGAAGAATCCATGTGGCAGTTGGCCCTCGGACCCGGAGAATCGTACCCGGAACGGCCCGACGAGGCCGATTGCAGTTACTATCTCCGCACTGGGATTTGTGGCTACGGCTCGAGGTGTCGGTACAATCACCCCCGTGATCGTAGCGCGGTTACCGGAGCTCTGAGAGCTGGGTCAGTGGAGTACCCAGAGCGAGTGGGGCAGCCTGTGTGCCAGTATTATATGAGGACGGGGACGTGCAAATTTGGTGCCACTTGTAAGTATCACCATCCTAAGCAAGGAGGAGGCTCGGCGACCCCTGTATCGCTTAACTACTATGGATACCCATTGCGACCGGGTGAAAGAGAGTGTTCGTACTATGTCAAAACTGGACAGTGTAAGTTTGGTGCAACTTGTAAATTCCATCATCCACCACTGACTAGCACACAACCTCAAGTGCCATCACAAGCCCAAGCTTCAATTGTACCTACACCTACATTGTATCAAACTGTACAATCTCCATCTGTTTCCTCACAGCCGTATGGAACAGTAATGGTTGCAAGGCCTCCTTTGCTACCTAGCTCATACGTTCAAAGCCCTTATGGTCCAATGCTGATTCCCCCCGGAATGGTTCCTTTCTCAGGTTGGAGTCCATATCCGGCTGGTGCAAGCCCATTAGCTTCTCCTAGTACTCAAACCGCTGTTGGTTCAGGGGCACTTTATGGGATAAATCAAATATCTCCTTCAGCACCTGCATATACAGGAATCTTTCCAACTGCACCTTTTTCTCTTGGTCCTCCAACCACTAGCCAGAAGGAGCAATCTCATCCTGAAAGACCTGGCCAAGCAGAATGTCAGTATTACCTCAGAACAGGGGAATGTAAATTTGGGTCCTCGTGTAGATATCATCATCCAGCAGAAGTTGTTCCACTAAAAACACCTGTGGCCCTTAGCTCCACTGGTCTTCCATCGCGCCCGGGTGCACCACTTTGCACTCACTATGCACAACGAGGAGCATGCAAATTCGGGTCTGCATGCAAATTCGACCACCCAGTGGGAACACTCAGTTACAGTCCATCAGCGTCTTCTCTCACTGATGTGCCAGTTGCACCCTATCCAGTGGGATCGTCAATAGGTACGCTAGCCCCATCATCCTCATCGTCAGAATTGCGGCCTGAACTTAATTCAGGCACAAGCAAGGACTCAGCTTCTACCAGAATGTCTTCATCACCGAGCACTGTTAGTGGATCAGTTGGTTCCACTGTTTCTAAGGATGGTGTTACCCATTTGGGTGACCAACAATCTGCTCAGGGTTCTGGCCCTTCAACTACCAGCGACAACAGTACAGAGTCTCATAGTTCGAGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0097159 GO:1901363
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-CCCH

Protein Analysis

476

Amino Acids

50.09

Weight (kDa)

8.1

Isoelectric Point (pI)

63.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CCCH PF00642 48 - 73 1.8e-09 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 95 - 119 3e-10 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 139 - 165 1.9e-09 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 301 - 325 1.3e-09 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 347 - 371 5.4e-09 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 820
Acc36I ACCTGC 1 cut(s) 820
AccB1I GGYRCC 1 cut(s) 329
AccB7I CCANNNNNTGG 1 cut(s) 1114
AccBSI CCGCTC 1 cut(s) 62
AccII CGCG 2 cut(s) 230, 1033
AciI CCGC 5 cut(s) 60, 169, 230, 759, 1231
AclWI GGATC 4 cut(s) 35, 48, 1192, 1315
AcoI YGGCCR 1 cut(s) 901
AcsI RAATTY 5 cut(s) 323, 479, 944, 1082, 1100
AcuI CTGAAG 1 cut(s) 789
AdeI CACNNNGTG 1 cut(s) 1114
AfiI CCNNNNNNNGG 5 cut(s) 77, 359, 688, 701, 1114
AgsI TTSAA 3 cut(s) 540, 653, 1386
AjiI CACGTC 1 cut(s) 318
AjnI CCWGG 1 cut(s) 898
AjuI GAANNNNNNNTTGG 2 cut(s) 930, 962
AleI CACNNNNGTG 2 cut(s) 216, 1157
AluBI AGCT 7 cut(s) 242, 251, 536, 642, 740, 1014, 1268
AluI AGCT 7 cut(s) 242, 251, 536, 642, 740, 1014, 1268
Alw21I GWGCWC 4 cut(s) 23, 244, 1045, 1298
Alw26I GTCTC 2 cut(s) 68, 1416
Alw44I GTGCAC 1 cut(s) 1041
AlwI GGATC 4 cut(s) 35, 48, 1192, 1315
AlwNI CAGNNNCTG 1 cut(s) 812
Ama87I CYCGRG 3 cut(s) 71, 193, 1036
AoxI GGCC 9 cut(s) 79, 105, 137, 147, 623, 901, 1005, 1232, 1378
ApaLI GTGCAC 1 cut(s) 1041
ApeKI GCWGC 1 cut(s) 283
ApoI RAATTY 5 cut(s) 323, 479, 944, 1082, 1100
Asp700I GAANNNNTTC 2 cut(s) 984, 1282
AspLEI GCGC 2 cut(s) 230, 1035
AsuC2I CCSGG 7 cut(s) 66, 117, 131, 417, 684, 1037, 1038
AsuHPI GGTGA 5 cut(s) 203, 338, 431, 1281, 1364
AsuNHI GCTAGC 1 cut(s) 1201
AvaI CYCGRG 3 cut(s) 71, 193, 1036
AvaII GGWCC 6 cut(s) 57, 68, 113, 665, 854, 951
BaeGI GKGCMC 2 cut(s) 778, 1045
BaeI ACNNNNGTAYC 2 cut(s) 366, 399
BalI TGGCCA 1 cut(s) 903
BamHI GGATCC 1 cut(s) 40
BanI GGYRCC 1 cut(s) 329
BanII GRGCYC 1 cut(s) 244
BauI CACGAG 1 cut(s) 955
BbsI GAAGAC 3 cut(s) 1016, 1137, 1275
Bbv12I GWGCWC 4 cut(s) 23, 244, 1045, 1298
BbvI GCAGC 1 cut(s) 295
BccI CCATC 8 cut(s) 357, 492, 529, 589, 1036, 1144, 1216, 1328
BceAI ACGGC 3 cut(s) 152, 205, 583
BcgI CGANNNNNNTGC 2 cut(s) 1059, 1093
BciT130I CCWGG 1 cut(s) 900
BciVI GTATCC 1 cut(s) 395
BcnI CCSGG 7 cut(s) 66, 117, 131, 417, 684, 1037, 1038
BcoDI GTCTC 2 cut(s) 68, 1416
BfaI CTAG 5 cut(s) 501, 639, 747, 867, 1202
BfuAI ACCTGC 1 cut(s) 820
BfuI GTATCC 1 cut(s) 395
BisI GCNGC 2 cut(s) 284, 1232
BlsI GCNGC 2 cut(s) 285, 1233
BmcAI AGTACT 1 cut(s) 751
Bme1390I CCNGG 8 cut(s) 66, 117, 131, 417, 684, 900, 1037, 1038
Bme18I GGWCC 6 cut(s) 57, 68, 113, 665, 854, 951
BmeT110I CYCGRG 3 cut(s) 71, 193, 1036
BmgBI CACGTC 1 cut(s) 318
BmiI GGNNCC 8 cut(s) 42, 69, 70, 115, 331, 693, 952, 1318
BmrFI CCNGG 8 cut(s) 66, 117, 131, 417, 684, 900, 1037, 1038
BmrI ACTGGG 2 cut(s) 183, 1106
BmtI GCTAGC 1 cut(s) 1205
BmuI ACTGGG 2 cut(s) 183, 1106
BpiI GAAGAC 3 cut(s) 1016, 1137, 1275
Bpu10I CCTNAGC 3 cut(s) 354, 1010, 1368
BpuEI CTTGAG 1 cut(s) 498
BpuMI CCSGG 7 cut(s) 66, 117, 131, 417, 684, 1037, 1038
BsaJI CCNNGG 3 cut(s) 109, 682, 1036
BsaWI WCCGGW 1 cut(s) 236
Bsc4I CCNNNNNNNGG 5 cut(s) 77, 359, 688, 701, 1114
Bse1I ACTGG 8 cut(s) 82, 178, 295, 454, 1024, 1112, 1163, 1178
Bse3DI GCAATG 1 cut(s) 407
BseBI CCWGG 1 cut(s) 900
BseDI CCNNGG 3 cut(s) 109, 682, 1036
BseGI GGATG 6 cut(s) 349, 487, 886, 970, 1211, 1339
BseLI CCNNNNNNNGG 5 cut(s) 77, 359, 688, 701, 1114
BseMI GCAATG 1 cut(s) 407
BseMII CTCAG 6 cut(s) 236, 714, 940, 1138, 1278, 1382
BseNI ACTGG 8 cut(s) 82, 178, 295, 454, 1024, 1112, 1163, 1178
BseRI GAGGAG 2 cut(s) 378, 1086
BseSI GKGCMC 2 cut(s) 778, 1045
BseXI GCAGC 1 cut(s) 295
BseYI CCCAGC 1 cut(s) 251
BsgI GTGCAG 1 cut(s) 822
Bsh1236I CGCG 2 cut(s) 230, 1033
Bsh1285I CGRYCG 2 cut(s) 16, 416
BshFI GGCC 9 cut(s) 81, 107, 139, 149, 625, 903, 1007, 1234, 1380
BshNI GGYRCC 1 cut(s) 329
BsiEI CGRYCG 2 cut(s) 16, 416
BsiHKAI GWGCWC 4 cut(s) 23, 244, 1045, 1298
BsiHKCI CYCGRG 3 cut(s) 71, 193, 1036
BsiSI CCGG 9 cut(s) 50, 65, 117, 131, 237, 416, 684, 719, 1037
BslFI GGGAC 2 cut(s) 81, 328
BslI CCNNNNNNNGG 5 cut(s) 77, 359, 688, 701, 1114
BsmAI GTCTC 2 cut(s) 68, 1416
BsmFI GGGAC 2 cut(s) 81, 328
BsnI GGCC 9 cut(s) 81, 107, 139, 149, 625, 903, 1007, 1234, 1380
BsoBI CYCGRG 3 cut(s) 71, 193, 1036
Bsp1286I GDGCHC 5 cut(s) 23, 244, 778, 1045, 1298
Bsp1407I TGTACA 1 cut(s) 571
Bsp143I GATC 4 cut(s) 40, 220, 1184, 1307
BspACI CCGC 5 cut(s) 60, 169, 230, 759, 1231
BspANI GGCC 9 cut(s) 81, 107, 139, 149, 625, 903, 1007, 1234, 1380
BspCNI CTCAG 6 cut(s) 237, 713, 939, 1137, 1277, 1381
BspFNI CGCG 2 cut(s) 230, 1033
BspLI GGNNCC 8 cut(s) 42, 69, 70, 115, 331, 693, 952, 1318
BspMI ACCTGC 1 cut(s) 820
BspOI GCTAGC 1 cut(s) 1205
BspPI GGATC 4 cut(s) 35, 48, 1192, 1315
BspT107I GGYRCC 1 cut(s) 329
BsrBI CCGCTC 1 cut(s) 62
BsrDI GCAATG 1 cut(s) 407
BsrGI TGTACA 1 cut(s) 571
BsrI ACTGG 8 cut(s) 82, 178, 295, 454, 1024, 1112, 1163, 1178
BssECI CCNNGG 3 cut(s) 109, 682, 1036
BssMI GATC 4 cut(s) 40, 220, 1184, 1307
BssSI CACGAG 1 cut(s) 955
Bst2BI CACGAG 1 cut(s) 955
Bst2UI CCWGG 1 cut(s) 900
Bst4CI ACNGT 8 cut(s) 14, 456, 571, 610, 1133, 1300, 1324, 1403
BstAUI TGTACA 1 cut(s) 571
BstC8I GCNNGC 4 cut(s) 730, 1078, 1096, 1203
BstDEI CTNAG 9 cut(s) 245, 354, 700, 926, 1010, 1124, 1264, 1329, 1368
BstEII GGTNACC 2 cut(s) 232, 1352
BstENI CCTNNNNNAGG 2 cut(s) 357, 699
BstF5I GGATG 6 cut(s) 349, 487, 886, 970, 1211, 1339
BstFNI CGCG 2 cut(s) 230, 1033
BstHHI GCGC 2 cut(s) 230, 1035
BstKTI GATC 4 cut(s) 43, 223, 1187, 1310
BstMAI GTCTC 2 cut(s) 68, 1416
BstMBI GATC 4 cut(s) 40, 220, 1184, 1307
BstMCI CGRYCG 2 cut(s) 16, 416
BstMWI GCNNNNNNNGC 3 cut(s) 248, 280, 631
BstNI CCWGG 1 cut(s) 900
BstNSI RCATGY 2 cut(s) 1080, 1098
BstPI GGTNACC 2 cut(s) 232, 1352
BstSCI CCNGG 8 cut(s) 64, 115, 129, 415, 682, 898, 1035, 1036
BstSLI GKGCMC 2 cut(s) 778, 1045
BstUI CGCG 2 cut(s) 230, 1033
BstV1I GCAGC 1 cut(s) 295
BstV2I GAAGAC 3 cut(s) 1016, 1137, 1275
BstX2I RGATCY 1 cut(s) 40
BstYI RGATCY 1 cut(s) 40
BsuI GTATCC 1 cut(s) 395
BsuRI GGCC 9 cut(s) 81, 107, 139, 149, 625, 903, 1007, 1234, 1380
BtgZI GCGATG 1 cut(s) 1014
BtrI CACGTC 1 cut(s) 318
BtsCI GGATG 6 cut(s) 349, 487, 886, 970, 1211, 1339
BveI ACCTGC 1 cut(s) 820
Cac8I GCNNGC 4 cut(s) 730, 1078, 1096, 1203
CaiI CAGNNNCTG 1 cut(s) 812
CfoI GCGC 2 cut(s) 230, 1035
Cfr9I CCCGGG 1 cut(s) 1036
CseI GACGC 1 cut(s) 1131
CviAII CATG 3 cut(s) 94, 1077, 1095
DdeI CTNAG 9 cut(s) 245, 354, 700, 926, 1010, 1124, 1264, 1329, 1368
DpnI GATC 4 cut(s) 42, 222, 1186, 1309
DpnII GATC 4 cut(s) 40, 220, 1184, 1307
DraIII CACNNNGTG 1 cut(s) 1114
EaeI YGGCCR 1 cut(s) 901
Ecl136II GAGCTC 1 cut(s) 242
Eco147I AGGCCT 1 cut(s) 625
Eco24I GRGCYC 1 cut(s) 244
Eco32I GATATC 1 cut(s) 965
Eco47I GGWCC 6 cut(s) 57, 68, 113, 665, 854, 951
Eco53kI GAGCTC 1 cut(s) 242
Eco57I CTGAAG 1 cut(s) 789
Eco88I CYCGRG 3 cut(s) 71, 193, 1036
Eco91I GGTNACC 2 cut(s) 232, 1352
EcoICRI GAGCTC 1 cut(s) 242
EcoNI CCTNNNNNAGG 2 cut(s) 357, 699
EcoO109I RGGNCCY 2 cut(s) 68, 951
EcoO65I GGTNACC 2 cut(s) 232, 1352
EcoRII CCWGG 1 cut(s) 898
EcoRV GATATC 1 cut(s) 965
EcoT38I GRGCYC 1 cut(s) 244
FaeI CATG 3 cut(s) 97, 1080, 1098
FalI AAGNNNNNCTT 2 cut(s) 613, 645
FaqI GGGAC 2 cut(s) 81, 328
FatI CATG 3 cut(s) 93, 1076, 1094
Fnu4HI GCNGC 2 cut(s) 284, 1232
FokI GGATG 6 cut(s) 336, 474, 873, 957, 1198, 1346
FriOI GRGCYC 1 cut(s) 244
Fsp4HI GCNGC 2 cut(s) 284, 1232
FspBI CTAG 5 cut(s) 501, 639, 747, 867, 1202
GlaI GCGC 2 cut(s) 229, 1034
GluI GCNGC 2 cut(s) 284, 1232
GsaI CCCAGC 1 cut(s) 255
HaeIII GGCC 9 cut(s) 81, 107, 139, 149, 625, 903, 1007, 1234, 1380
HapII CCGG 9 cut(s) 50, 65, 117, 131, 237, 416, 684, 719, 1037
HgaI GACGC 1 cut(s) 1131
HhaI GCGC 2 cut(s) 230, 1035
Hin1II CATG 3 cut(s) 97, 1080, 1098
Hin6I GCGC 2 cut(s) 228, 1033
HinP1I GCGC 2 cut(s) 228, 1033
HindIII AAGCTT 1 cut(s) 534
HinfI GANTC 7 cut(s) 89, 122, 676, 709, 825, 1262, 1409
HpaII CCGG 9 cut(s) 50, 65, 117, 131, 237, 416, 684, 719, 1037
HphI GGTGA 5 cut(s) 203, 338, 431, 1281, 1364
Hpy166II GTNNAC 2 cut(s) 57, 1043
Hpy188I TCNGA 6 cut(s) 18, 40, 113, 246, 929, 1225
Hpy188III TCNNGA 1 cut(s) 890
Hpy8I GTNNAC 2 cut(s) 57, 1043
Hpy99I CGWCG 2 cut(s) 49, 146
HpyAV CCTTC 4 cut(s) 20, 813, 868, 1392
HpyCH4III ACNGT 8 cut(s) 14, 456, 571, 610, 1133, 1300, 1324, 1403
HpyCH4IV ACGT 2 cut(s) 317, 648
HpyF10VI GCNNNNNNNGC 3 cut(s) 248, 280, 631
HpyF3I CTNAG 9 cut(s) 245, 354, 700, 926, 1010, 1124, 1264, 1329, 1368
HpySE526I ACGT 2 cut(s) 317, 648
Hsp92II CATG 3 cut(s) 97, 1080, 1098
HspAI GCGC 2 cut(s) 228, 1033
KflI GGGWCCC 1 cut(s) 68
Kzo9I GATC 4 cut(s) 40, 220, 1184, 1307
LmnI GCTCC 6 cut(s) 18, 67, 239, 877, 1019, 1073
Lsp1109I GCAGC 1 cut(s) 295
MaeI CTAG 5 cut(s) 501, 639, 747, 867, 1202
MaeII ACGT 2 cut(s) 317, 648
MaeIII GTNAC 5 cut(s) 158, 232, 1127, 1339, 1352
MalI GATC 4 cut(s) 42, 222, 1186, 1309
MbiI CCGCTC 1 cut(s) 62
MboI GATC 4 cut(s) 40, 220, 1184, 1307
MboII GAAGA 4 cut(s) 98, 1016, 1137, 1275
MfeI CAATTG 1 cut(s) 540
MflI RGATCY 1 cut(s) 40
MhlI GDGCHC 5 cut(s) 23, 244, 778, 1045, 1298
MlsI TGGCCA 1 cut(s) 903
MluCI AATT 8 cut(s) 323, 479, 540, 944, 1082, 1100, 1226, 1243
MluNI TGGCCA 1 cut(s) 903
MlyI GAGTC 3 cut(s) 718, 1256, 1418
MmeI TCCRAC 4 cut(s) 18, 686, 857, 884
Mox20I TGGCCA 1 cut(s) 903
MroXI GAANNNNTTC 2 cut(s) 984, 1282
MscI TGGCCA 1 cut(s) 903
MseI TTAA 3 cut(s) 390, 1242, 1426
MslI CAYNNNNRTG 3 cut(s) 216, 1157, 1350
Msp20I TGGCCA 1 cut(s) 903
MspA1I CMGCKG 1 cut(s) 761
MspI CCGG 9 cut(s) 50, 65, 117, 131, 237, 416, 684, 719, 1037
MspR9I CCNGG 8 cut(s) 66, 117, 131, 417, 684, 900, 1037, 1038
MunI CAATTG 1 cut(s) 540
MvaI CCWGG 1 cut(s) 900
MvnI CGCG 2 cut(s) 230, 1033
MwoI GCNNNNNNNGC 3 cut(s) 248, 280, 631
NciI CCSGG 7 cut(s) 66, 117, 131, 417, 684, 1037, 1038
NdeII GATC 4 cut(s) 40, 220, 1184, 1307
NheI GCTAGC 1 cut(s) 1201
NlaIII CATG 3 cut(s) 97, 1080, 1098
NlaIV GGNNCC 8 cut(s) 42, 69, 70, 115, 331, 693, 952, 1318
NmeAIII GCCGAG 1 cut(s) 350
NmuCI GTSAC 1 cut(s) 1352
NspI RCATGY 2 cut(s) 1080, 1098
OliI CACNNNNGTG 2 cut(s) 216, 1157
PaeI GCATGC 2 cut(s) 1080, 1098
PaeR7I CTCGAG 1 cut(s) 193
PaqCI CACCTGC 1 cut(s) 820
PceI AGGCCT 1 cut(s) 625
PdmI GAANNNNTTC 2 cut(s) 984, 1282
PfeI GAWTC 4 cut(s) 89, 122, 676, 825
PflMI CCANNNNNTGG 1 cut(s) 1114
PfoI TCCNGGA 1 cut(s) 64
PkrI GCNGC 2 cut(s) 285, 1233
PleI GAGTC 3 cut(s) 717, 1256, 1417
PpsI GAGTC 3 cut(s) 717, 1256, 1417
PpuMI RGGWCCY 2 cut(s) 68, 951
Psp124BI GAGCTC 1 cut(s) 244
Psp5II RGGWCCY 2 cut(s) 68, 951
Psp6I CCWGG 1 cut(s) 898
PspEI GGTNACC 2 cut(s) 232, 1352
PspFI CCCAGC 1 cut(s) 251
PspGI CCWGG 1 cut(s) 898
PspN4I GGNNCC 8 cut(s) 42, 69, 70, 115, 331, 693, 952, 1318
PspPPI RGGWCCY 2 cut(s) 68, 951
PspXI VCTCGAGB 1 cut(s) 193
PstNI CAGNNNCTG 1 cut(s) 812
PsuI RGATCY 1 cut(s) 40
RseI CAYNNNNRTG 3 cut(s) 216, 1157, 1350
SacI GAGCTC 1 cut(s) 244
SaqAI TTAA 3 cut(s) 390, 1242, 1426
SatI GCNGC 2 cut(s) 284, 1232
Sau3AI GATC 4 cut(s) 40, 220, 1184, 1307
ScaI AGTACT 1 cut(s) 751
SchI GAGTC 3 cut(s) 718, 1256, 1418
ScrFI CCNGG 8 cut(s) 66, 117, 131, 417, 684, 900, 1037, 1038
SduI GDGCHC 5 cut(s) 23, 244, 778, 1045, 1298
Sfr274I CTCGAG 1 cut(s) 193
SinI GGWCC 6 cut(s) 57, 68, 113, 665, 854, 951
SlaI CTCGAG 1 cut(s) 193
SmaI CCCGGG 1 cut(s) 1038
SmiMI CAYNNNNRTG 3 cut(s) 216, 1157, 1350
SmlI CTYRAG 2 cut(s) 193, 513
SmoI CTYRAG 2 cut(s) 193, 513
SphI GCATGC 2 cut(s) 1080, 1098
Sse9I AATT 8 cut(s) 323, 479, 540, 944, 1082, 1100, 1226, 1243
SseBI AGGCCT 1 cut(s) 625
SsiI CCGC 5 cut(s) 60, 169, 230, 759, 1231
SspMI CTAG 5 cut(s) 501, 639, 747, 867, 1202
SstI GAGCTC 1 cut(s) 244
StuI AGGCCT 1 cut(s) 625
StyD4I CCNGG 8 cut(s) 64, 115, 129, 415, 682, 898, 1035, 1036
TaaI ACNGT 8 cut(s) 14, 456, 571, 610, 1133, 1300, 1324, 1403
TaiI ACGT 2 cut(s) 320, 651
TaqI TCGA 4 cut(s) 84, 194, 1104, 1421
TasI AATT 8 cut(s) 323, 479, 540, 944, 1082, 1100, 1226, 1243
TatI WGTACW 3 cut(s) 571, 749, 1403
TauI GCSGC 1 cut(s) 1234
TfiI GAWTC 4 cut(s) 89, 122, 676, 825
Tru1I TTAA 3 cut(s) 390, 1242, 1426
Tru9I TTAA 3 cut(s) 390, 1242, 1426
TseFI GTSAC 1 cut(s) 1352
TseI GCWGC 1 cut(s) 283
Tsp45I GTSAC 1 cut(s) 1352
TspDTI ATGAA 1 cut(s) 1275
TspGWI ACGGA 2 cut(s) 33, 38
TspMI CCCGGG 1 cut(s) 1036
Van91I CCANNNNNTGG 1 cut(s) 1114
VneI GTGCAC 1 cut(s) 1041
VpaK11BI GGWCC 6 cut(s) 57, 68, 113, 665, 854, 951
XagI CCTNNNNNAGG 2 cut(s) 357, 699
XapI RAATTY 5 cut(s) 323, 479, 944, 1082, 1100
XceI RCATGY 2 cut(s) 1080, 1098
XcmI CCANNNNNNNNNTGG 1 cut(s) 100
XhoI CTCGAG 1 cut(s) 193
XmaI CCCGGG 1 cut(s) 1036
XmnI GAANNNNTTC 2 cut(s) 984, 1282
XspI CTAG 5 cut(s) 501, 639, 747, 867, 1202
ZrmI AGTACT 1 cut(s) 751
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.