MD13G1171100.v1.1

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
OG0006831
Physical Location & Seq
Forward (+)
13928862 .. 13932931
4070 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1171100.v1.1.491

Sequence Viewer

Length: 1458 bp
ATGGAGCGGTACGGTCGGGCCGCAGAAGGGTCACAGTCCGATCCACCGCCGGAGTGGAACATTCCGGGACCCGAAACAGGGCTGGAAGAGTCCATGTGGCAGTTGGGGCTCCGTCCCGGGGAATCGTACCCTGAGCGACCCGACGAGGCCGATTGCAGTTATTACTTGAGGACTGGGATTTGTGGGTACGGCTCACGGTGTCGGTACAATCATCCCCGTGATCGCAGCACGGTTACCGTAGCGGCAAGACCCGGAGGATTAGAGTACCCTGAGCGAGCGAGCCAGCCTGTGTGCCAGTATTATATGAGGACGGGGACTTGCAAATTCGGTGCTTCGTGTAAGTTCCACCATCCTAAGCAGGGAGGAAGCTCTGGTAGCCCTGTTTCGCTAAACTATTATGGATATCCATTGCGGCCGGGTGAGAGAGAGTGTTCCTACTATGTGAAAACTGGACAGTGTAAGTTCAGTGCAACTTGTAAATTCCATCATCCACAGCCGGCTGGCATACAGCTTCCAGTGCCGTCACCAGCACCTCGAGTTTCACCTGTACCTGCTACACACACATTGTATCAAACTGTGCAATCGCCATCTGTTTCATCACAACAGTATGAAGTAGTATTTGCAAGGCCTCCTTTGCTACAGGGGTCGTATGTTCCAAGCCCCTATGGTCAAGTGCTACTTTCCCCGGGCACAATTCCTTTTCCAGGTTGGAATCCGTATCAGGCACCTGCAAGCCAATTGCCTTCGAGTACTCAACCTGGTGTTGGTTCTGGGACACTTTATACTCAACTATCACCTTCAGCACCTGCATATACCGGAGTGTATCAGCCTATACCTTTACCTTCCTCTTTTGGTCTTCCAACTACTAGCCAGAAGGAGCTTTCATTTCCAGAAAGACCTGGTCAACCAGAATGCCAGTATTACATGAGAACAGGGGATTGTAAATTTGGTTCCTCATGTAGATATCATCATCCACCTGAAGCTGTTCAACCAAAAGCAACTGTTGTCCTTAGCTCCAGTGGTCTTCCTTCGCGCCCGGGTGCACCCCTTTGCACTCACTATCAACAACGTGGAGCATGCAAGTTTGGACCCGCATGCAAATTTGACCACCCAATTGGAACACTGAGTTACAGCTCATCAACGTCTTCTCTTGCTGATATGCCAGTTGCACCCTACCCAGTGGGATCATCAATTGGTACACTAGCCCCGTCATCCTCCATACATCAGTCATGTTCATCTCTGTGTTTATATCATCTTTATACGGCCATCCCTTTTATCCCAAATAAGCCATGGCCGACCTCCAAAAGTTTAGCAAAAACCCCATATAGCTTTCCCAGCTTTCTCTTCAATAACCTCGAAAGAATCTGCGGTTCCTTCAGGCAAATCCGTGTCCATCTCCAATTTTGGAGCTCGTTATCCTCATTTGTGCTCCATCATTTTTCAGAACGAATACATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0097159 GO:1901363
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-CCCH

Protein Analysis

486

Amino Acids

53.13

Weight (kDa)

8.88

Isoelectric Point (pI)

66.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CCCH PF00642 48 - 73 1.8e-09 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 95 - 119 5.8e-11 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 139 - 165 2.1e-08 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 300 - 326 4.6e-10 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 347 - 371 5.3e-09 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 736, 814
Acc36I ACCTGC 3 cut(s) 559, 736, 814
AccB1I GGYRCC 1 cut(s) 724
AccBSI CCGCTC 1 cut(s) 7
AccII CGCG 1 cut(s) 1033
AciI CCGC 7 cut(s) 7, 21, 47, 242, 412, 1092, 1368
AclWI GGATC 2 cut(s) 35, 1192
AcoI YGGCCR 3 cut(s) 413, 1263, 1292
AcsI RAATTY 4 cut(s) 323, 479, 944, 1100
AcuI CTGAAG 3 cut(s) 783, 999, 1360
AfaI GTAC 8 cut(s) 11, 128, 188, 206, 266, 549, 751, 1198
AfiI CCNNNNNNNGG 7 cut(s) 27, 77, 78, 118, 359, 704, 764
AgsI TTSAA 2 cut(s) 989, 1348
AjnI CCWGG 3 cut(s) 703, 757, 898
AluBI AGCT 9 cut(s) 369, 511, 880, 983, 1014, 1134, 1329, 1338, 1410
AluI AGCT 9 cut(s) 369, 511, 880, 983, 1014, 1134, 1329, 1338, 1410
Alw21I GWGCWC 3 cut(s) 1045, 1412, 1431
Alw44I GTGCAC 1 cut(s) 1041
AlwI GGATC 2 cut(s) 35, 1192
AlwNI CAGNNNCTG 1 cut(s) 806
Ama87I CYCGRG 4 cut(s) 116, 534, 685, 1036
AoxI GGCC 6 cut(s) 18, 147, 413, 626, 1263, 1292
ApaLI GTGCAC 1 cut(s) 1041
ApeKI GCWGC 1 cut(s) 225
ApoI RAATTY 4 cut(s) 323, 479, 944, 1100
Asp700I GAANNNNTTC 1 cut(s) 984
AspLEI GCGC 1 cut(s) 1035
AspS9I GGNCC 3 cut(s) 18, 68, 1088
AsuC2I CCSGG 9 cut(s) 66, 117, 118, 252, 417, 686, 687, 1037, 1038
AsuHPI GGTGA 4 cut(s) 431, 516, 534, 786
AvaI CYCGRG 4 cut(s) 116, 534, 685, 1036
AvaII GGWCC 2 cut(s) 68, 1088
BaeGI GKGCMC 2 cut(s) 692, 1045
BanI GGYRCC 1 cut(s) 724
BanII GRGCYC 2 cut(s) 111, 1412
BbsI GAAGAC 3 cut(s) 848, 1016, 1137
Bbv12I GWGCWC 3 cut(s) 1045, 1412, 1431
BbvI GCAGC 1 cut(s) 237
BccI CCATC 6 cut(s) 357, 492, 595, 1274, 1401, 1440
BceAI ACGGC 3 cut(s) 205, 505, 1278
BciT130I CCWGG 3 cut(s) 705, 759, 900
BcnI CCSGG 9 cut(s) 66, 117, 118, 252, 417, 686, 687, 1037, 1038
BfaI CTAG 2 cut(s) 867, 1202
BfmI CTRYAG 1 cut(s) 638
BfuAI ACCTGC 3 cut(s) 559, 736, 814
BisI GCNGC 4 cut(s) 21, 226, 243, 413
BlsI GCNGC 4 cut(s) 22, 227, 244, 414
BmcAI AGTACT 1 cut(s) 751
Bme18I GGWCC 2 cut(s) 68, 1088
BmeT110I CYCGRG 4 cut(s) 116, 534, 685, 1036
BmgT120I GGNCC 3 cut(s) 18, 68, 1088
BmiI GGNNCC 7 cut(s) 69, 70, 110, 726, 952, 1090, 1372
BmrI ACTGGG 2 cut(s) 183, 1172
BmuI ACTGGG 2 cut(s) 183, 1172
BpiI GAAGAC 3 cut(s) 848, 1016, 1137
BpmI CTGGAG 1 cut(s) 1000
Bpu10I CCTNAGC 4 cut(s) 132, 270, 354, 1010
BpuEI CTTGAG 1 cut(s) 187
BpuMI CCSGG 9 cut(s) 66, 117, 118, 252, 417, 686, 687, 1037, 1038
BsaJI CCNNGG 6 cut(s) 116, 117, 684, 685, 1036, 1289
BsaWI WCCGGW 1 cut(s) 815
Bsc4I CCNNNNNNNGG 7 cut(s) 27, 77, 78, 118, 359, 704, 764
Bse118I RCCGGY 1 cut(s) 496
Bse1I ACTGG 8 cut(s) 178, 295, 454, 515, 916, 1017, 1163, 1178
Bse3DI GCAATG 1 cut(s) 407
BseBI CCWGG 3 cut(s) 705, 759, 900
BseDI CCNNGG 6 cut(s) 116, 117, 684, 685, 1036, 1289
BseGI GGATG 6 cut(s) 211, 349, 487, 970, 1211, 1266
BseLI CCNNNNNNNGG 7 cut(s) 27, 77, 78, 118, 359, 704, 764
BseMI GCAATG 1 cut(s) 407
BseMII CTCAG 3 cut(s) 123, 261, 1115
BseNI ACTGG 8 cut(s) 178, 295, 454, 515, 916, 1017, 1163, 1178
BseSI GKGCMC 2 cut(s) 692, 1045
BseX3I CGGCCG 1 cut(s) 413
BseXI GCAGC 1 cut(s) 237
BseYI CCCAGC 1 cut(s) 1334
Bsh1236I CGCG 1 cut(s) 1033
Bsh1285I CGRYCG 2 cut(s) 16, 416
BshFI GGCC 6 cut(s) 20, 149, 415, 628, 1265, 1294
BshNI GGYRCC 1 cut(s) 724
BsiEI CGRYCG 2 cut(s) 16, 416
BsiHKAI GWGCWC 3 cut(s) 1045, 1412, 1431
BsiHKCI CYCGRG 4 cut(s) 116, 534, 685, 1036
BsiSI CCGG 9 cut(s) 50, 65, 117, 252, 416, 497, 686, 816, 1037
BslFI GGGAC 4 cut(s) 81, 99, 328, 787
BslI CCNNNNNNNGG 7 cut(s) 27, 77, 78, 118, 359, 704, 764
BsmFI GGGAC 4 cut(s) 81, 99, 328, 787
BsmI GAATGC 1 cut(s) 917
BsnI GGCC 6 cut(s) 20, 149, 415, 628, 1265, 1294
BsoBI CYCGRG 4 cut(s) 116, 534, 685, 1036
Bsp1286I GDGCHC 5 cut(s) 111, 692, 1045, 1412, 1431
Bsp143I GATC 3 cut(s) 40, 220, 1184
Bsp19I CCATGG 1 cut(s) 1289
BspACI CCGC 7 cut(s) 7, 21, 47, 242, 412, 1092, 1368
BspANI GGCC 6 cut(s) 20, 149, 415, 628, 1265, 1294
BspCNI CTCAG 3 cut(s) 124, 262, 1116
BspFNI CGCG 1 cut(s) 1033
BspLI GGNNCC 7 cut(s) 69, 70, 110, 726, 952, 1090, 1372
BspMI ACCTGC 3 cut(s) 559, 736, 814
BspPI GGATC 2 cut(s) 35, 1192
BspT107I GGYRCC 1 cut(s) 724
BsrBI CCGCTC 1 cut(s) 7
BsrDI GCAATG 1 cut(s) 407
BsrFI RCCGGY 1 cut(s) 496
BsrI ACTGG 8 cut(s) 178, 295, 454, 515, 916, 1017, 1163, 1178
BssAI RCCGGY 1 cut(s) 496
BssECI CCNNGG 6 cut(s) 116, 117, 684, 685, 1036, 1289
BssMI GATC 3 cut(s) 40, 220, 1184
BssT1I CCWWGG 1 cut(s) 1289
Bst2UI CCWGG 3 cut(s) 705, 759, 900
Bst4CI ACNGT 9 cut(s) 14, 36, 198, 232, 238, 456, 577, 606, 1003
Bst6I CTCTTC 2 cut(s) 81, 1349
BstC8I GCNNGC 8 cut(s) 276, 280, 284, 498, 502, 733, 1078, 1096
BstDEI CTNAG 5 cut(s) 132, 270, 354, 1010, 1124
BstDSI CCRYGG 1 cut(s) 1289
BstEII GGTNACC 1 cut(s) 232
BstENI CCTNNNNNAGG 1 cut(s) 702
BstF5I GGATG 6 cut(s) 211, 349, 487, 970, 1211, 1266
BstFNI CGCG 1 cut(s) 1033
BstHHI GCGC 1 cut(s) 1035
BstKTI GATC 3 cut(s) 43, 223, 1187
BstMBI GATC 3 cut(s) 40, 220, 1184
BstMCI CGRYCG 2 cut(s) 16, 416
BstMWI GCNNNNNNNGC 5 cut(s) 106, 375, 517, 634, 1335
BstNI CCWGG 3 cut(s) 705, 759, 900
BstNSI RCATGY 2 cut(s) 1080, 1098
BstPI GGTNACC 1 cut(s) 232
BstSFI CTRYAG 1 cut(s) 638
BstSLI GKGCMC 2 cut(s) 692, 1045
BstUI CGCG 1 cut(s) 1033
BstV1I GCAGC 1 cut(s) 237
BstV2I GAAGAC 3 cut(s) 848, 1016, 1137
BstXI CCANNNNNNTGG 1 cut(s) 1115
BstZI CGGCCG 1 cut(s) 413
BsuRI GGCC 6 cut(s) 20, 149, 415, 628, 1265, 1294
BtgI CCRYGG 1 cut(s) 1289
BtsCI GGATG 6 cut(s) 211, 349, 487, 970, 1211, 1266
BtsIMutI CAGTG 6 cut(s) 461, 472, 522, 1024, 1121, 1185
BveI ACCTGC 3 cut(s) 559, 736, 814
Cac8I GCNNGC 8 cut(s) 276, 280, 284, 498, 502, 733, 1078, 1096
CaiI CAGNNNCTG 1 cut(s) 806
CfoI GCGC 1 cut(s) 1035
Cfr10I RCCGGY 1 cut(s) 496
Cfr13I GGNCC 3 cut(s) 18, 68, 1088
Cfr9I CCCGGG 3 cut(s) 116, 685, 1036
CsiI ACCWGGT 2 cut(s) 757, 898
Csp6I GTAC 8 cut(s) 10, 127, 187, 205, 265, 548, 750, 1197
CviAII CATG 7 cut(s) 94, 925, 957, 1077, 1095, 1230, 1290
CviQI GTAC 8 cut(s) 10, 127, 187, 205, 265, 548, 750, 1197
DdeI CTNAG 5 cut(s) 132, 270, 354, 1010, 1124
DpnI GATC 3 cut(s) 42, 222, 1186
DpnII GATC 3 cut(s) 40, 220, 1184
EaeI YGGCCR 3 cut(s) 413, 1263, 1292
EagI CGGCCG 1 cut(s) 413
Eam1104I CTCTTC 2 cut(s) 81, 1349
EarI CTCTTC 2 cut(s) 81, 1349
Ecl136II GAGCTC 1 cut(s) 1410
EclXI CGGCCG 1 cut(s) 413
Eco130I CCWWGG 1 cut(s) 1289
Eco147I AGGCCT 1 cut(s) 628
Eco24I GRGCYC 2 cut(s) 111, 1412
Eco32I GATATC 2 cut(s) 404, 965
Eco47I GGWCC 2 cut(s) 68, 1088
Eco52I CGGCCG 1 cut(s) 413
Eco53kI GAGCTC 1 cut(s) 1410
Eco57I CTGAAG 3 cut(s) 783, 999, 1360
Eco88I CYCGRG 4 cut(s) 116, 534, 685, 1036
Eco91I GGTNACC 1 cut(s) 232
EcoICRI GAGCTC 1 cut(s) 1410
EcoNI CCTNNNNNAGG 1 cut(s) 702
EcoO109I RGGNCCY 1 cut(s) 68
EcoO65I GGTNACC 1 cut(s) 232
EcoRII CCWGG 3 cut(s) 703, 757, 898
EcoRV GATATC 2 cut(s) 404, 965
EcoT14I CCWWGG 1 cut(s) 1289
EcoT38I GRGCYC 2 cut(s) 111, 1412
ErhI CCWWGG 1 cut(s) 1289
FaeI CATG 7 cut(s) 97, 928, 960, 1080, 1098, 1233, 1293
FalI AAGNNNNNCTT 4 cut(s) 616, 648, 663, 695
FaqI GGGAC 4 cut(s) 81, 99, 328, 787
FatI CATG 7 cut(s) 93, 924, 956, 1076, 1094, 1229, 1289
FauI CCCGC 1 cut(s) 1099
Fnu4HI GCNGC 4 cut(s) 21, 226, 243, 413
FokI GGATG 6 cut(s) 198, 336, 474, 957, 1198, 1253
FriOI GRGCYC 2 cut(s) 111, 1412
Fsp4HI GCNGC 4 cut(s) 21, 226, 243, 413
FspBI CTAG 2 cut(s) 867, 1202
GlaI GCGC 1 cut(s) 1034
GluI GCNGC 4 cut(s) 21, 226, 243, 413
GsaI CCCAGC 1 cut(s) 1338
GsuI CTGGAG 1 cut(s) 1000
HaeIII GGCC 6 cut(s) 20, 149, 415, 628, 1265, 1294
HapII CCGG 9 cut(s) 50, 65, 117, 252, 416, 497, 686, 816, 1037
HhaI GCGC 1 cut(s) 1035
Hin1II CATG 7 cut(s) 97, 928, 960, 1080, 1098, 1233, 1293
Hin6I GCGC 1 cut(s) 1033
HinP1I GCGC 1 cut(s) 1033
HincII GTYRAC 1 cut(s) 905
HindII GTYRAC 1 cut(s) 905
HinfI GANTC 4 cut(s) 89, 122, 712, 1362
HpaII CCGG 9 cut(s) 50, 65, 117, 252, 416, 497, 686, 816, 1037
HphI GGTGA 4 cut(s) 431, 516, 534, 786
Hpy166II GTNNAC 3 cut(s) 905, 1043, 1199
Hpy188I TCNGA 2 cut(s) 40, 1444
Hpy188III TCNNGA 1 cut(s) 890
Hpy8I GTNNAC 3 cut(s) 905, 1043, 1199
Hpy99I CGWCG 1 cut(s) 146
HpyAV CCTTC 7 cut(s) 20, 753, 807, 852, 868, 1038, 1384
HpyCH4III ACNGT 9 cut(s) 14, 36, 198, 232, 238, 456, 577, 606, 1003
HpyCH4IV ACGT 2 cut(s) 1069, 1142
HpyF10VI GCNNNNNNNGC 5 cut(s) 106, 375, 517, 634, 1335
HpyF3I CTNAG 5 cut(s) 132, 270, 354, 1010, 1124
HpySE526I ACGT 2 cut(s) 1069, 1142
Hsp92II CATG 7 cut(s) 97, 928, 960, 1080, 1098, 1233, 1293
HspAI GCGC 1 cut(s) 1033
KflI GGGWCCC 1 cut(s) 68
KroI GCCGGC 1 cut(s) 496
KroNI GCCGGC 1 cut(s) 498
Kzo9I GATC 3 cut(s) 40, 220, 1184
LmnI GCTCC 7 cut(s) 4, 114, 877, 1019, 1073, 1407, 1434
Lsp1109I GCAGC 1 cut(s) 237
MabI ACCWGGT 2 cut(s) 757, 898
MaeI CTAG 2 cut(s) 867, 1202
MaeII ACGT 2 cut(s) 1069, 1142
MaeIII GTNAC 4 cut(s) 30, 232, 522, 1127
MalI GATC 3 cut(s) 42, 222, 1186
MbiI CCGCTC 1 cut(s) 7
MboI GATC 3 cut(s) 40, 220, 1184
MboII GAAGA 5 cut(s) 98, 848, 1016, 1137, 1336
MfeI CAATTG 3 cut(s) 737, 1113, 1191
MhlI GDGCHC 5 cut(s) 111, 692, 1045, 1412, 1431
MluCI AATT 9 cut(s) 323, 479, 693, 737, 944, 1100, 1113, 1191, 1400
MlyI GAGTC 1 cut(s) 98
MmeI TCCRAC 2 cut(s) 689, 884
MroNI GCCGGC 1 cut(s) 496
MroXI GAANNNNTTC 1 cut(s) 984
MslI CAYNNNNRTG 2 cut(s) 216, 1240
MspI CCGG 9 cut(s) 50, 65, 117, 252, 416, 497, 686, 816, 1037
MunI CAATTG 3 cut(s) 737, 1113, 1191
Mva1269I GAATGC 1 cut(s) 917
MvaI CCWGG 3 cut(s) 705, 759, 900
MvnI CGCG 1 cut(s) 1033
MwoI GCNNNNNNNGC 5 cut(s) 106, 375, 517, 634, 1335
NaeI GCCGGC 1 cut(s) 498
NciI CCSGG 9 cut(s) 66, 117, 118, 252, 417, 686, 687, 1037, 1038
NcoI CCATGG 1 cut(s) 1289
NdeII GATC 3 cut(s) 40, 220, 1184
NgoMIV GCCGGC 1 cut(s) 496
NlaIII CATG 7 cut(s) 97, 928, 960, 1080, 1098, 1233, 1293
NlaIV GGNNCC 7 cut(s) 69, 70, 110, 726, 952, 1090, 1372
NmuCI GTSAC 2 cut(s) 30, 522
NspI RCATGY 2 cut(s) 1080, 1098
PaeI GCATGC 2 cut(s) 1080, 1098
PaeR7I CTCGAG 1 cut(s) 534
PaqCI CACCTGC 2 cut(s) 736, 814
PceI AGGCCT 1 cut(s) 628
PctI GAATGC 1 cut(s) 917
PdiI GCCGGC 1 cut(s) 498
PdmI GAANNNNTTC 1 cut(s) 984
PfeI GAWTC 3 cut(s) 122, 712, 1362
PflFI GACNNNGTC 1 cut(s) 900
PfoI TCCNGGA 1 cut(s) 64
PkrI GCNGC 4 cut(s) 22, 227, 244, 414
PleI GAGTC 1 cut(s) 97
PpsI GAGTC 1 cut(s) 97
PpuMI RGGWCCY 1 cut(s) 68
Psp124BI GAGCTC 1 cut(s) 1412
Psp5II RGGWCCY 1 cut(s) 68
Psp6I CCWGG 3 cut(s) 703, 757, 898
PspEI GGTNACC 1 cut(s) 232
PspFI CCCAGC 1 cut(s) 1334
PspGI CCWGG 3 cut(s) 703, 757, 898
PspN4I GGNNCC 7 cut(s) 69, 70, 110, 726, 952, 1090, 1372
PspPI GGNCC 3 cut(s) 18, 68, 1088
PspPPI RGGWCCY 1 cut(s) 68
PspXI VCTCGAGB 1 cut(s) 534
PsrI GAACNNNNNNTAC 2 cut(s) 934, 966
PstNI CAGNNNCTG 1 cut(s) 806
PsyI GACNNNGTC 1 cut(s) 900
RsaI GTAC 8 cut(s) 11, 128, 188, 206, 266, 549, 751, 1198
RsaNI GTAC 8 cut(s) 10, 127, 187, 205, 265, 548, 750, 1197
RseI CAYNNNNRTG 2 cut(s) 216, 1240
SacI GAGCTC 1 cut(s) 1412
SatI GCNGC 4 cut(s) 21, 226, 243, 413
Sau3AI GATC 3 cut(s) 40, 220, 1184
Sau96I GGNCC 3 cut(s) 18, 68, 1088
ScaI AGTACT 1 cut(s) 751
SchI GAGTC 1 cut(s) 98
SduI GDGCHC 5 cut(s) 111, 692, 1045, 1412, 1431
SexAI ACCWGGT 2 cut(s) 757, 898
SfcI CTRYAG 1 cut(s) 638
Sfr274I CTCGAG 1 cut(s) 534
SinI GGWCC 2 cut(s) 68, 1088
SlaI CTCGAG 1 cut(s) 534
SmaI CCCGGG 3 cut(s) 118, 687, 1038
SmiMI CAYNNNNRTG 2 cut(s) 216, 1240
SmlI CTYRAG 2 cut(s) 166, 534
SmoI CTYRAG 2 cut(s) 166, 534
SphI GCATGC 2 cut(s) 1080, 1098
Sse9I AATT 9 cut(s) 323, 479, 693, 737, 944, 1100, 1113, 1191, 1400
SseBI AGGCCT 1 cut(s) 628
SsiI CCGC 7 cut(s) 7, 21, 47, 242, 412, 1092, 1368
SspMI CTAG 2 cut(s) 867, 1202
SstI GAGCTC 1 cut(s) 1412
StuI AGGCCT 1 cut(s) 628
StyI CCWWGG 1 cut(s) 1289
TaaI ACNGT 9 cut(s) 14, 36, 198, 232, 238, 456, 577, 606, 1003
TaiI ACGT 2 cut(s) 1072, 1145
TaqI TCGA 3 cut(s) 535, 746, 1356
TasI AATT 9 cut(s) 323, 479, 693, 737, 944, 1100, 1113, 1191, 1400
TatI WGTACW 1 cut(s) 749
TauI GCSGC 3 cut(s) 23, 245, 415
TfiI GAWTC 3 cut(s) 122, 712, 1362
TscAI CASTG 6 cut(s) 461, 472, 522, 1024, 1128, 1185
TseFI GTSAC 2 cut(s) 30, 522
TseI GCWGC 1 cut(s) 225
Tsp45I GTSAC 2 cut(s) 30, 522
TspDTI ATGAA 4 cut(s) 585, 624, 873, 1224
TspGWI ACGGA 3 cut(s) 101, 705, 1376
TspMI CCCGGG 3 cut(s) 116, 685, 1036
TspRI CASTG 6 cut(s) 461, 472, 522, 1024, 1128, 1185
Tth111I GACNNNGTC 1 cut(s) 900
VneI GTGCAC 1 cut(s) 1041
VpaK11BI GGWCC 2 cut(s) 68, 1088
XagI CCTNNNNNAGG 1 cut(s) 702
XapI RAATTY 4 cut(s) 323, 479, 944, 1100
XceI RCATGY 2 cut(s) 1080, 1098
XcmI CCANNNNNNNNNTGG 3 cut(s) 51, 100, 1287
XhoI CTCGAG 1 cut(s) 534
XmaI CCCGGG 3 cut(s) 116, 685, 1036
XmnI GAANNNNTTC 1 cut(s) 984
XspI CTAG 2 cut(s) 867, 1202
ZrmI AGTACT 1 cut(s) 751
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.