zinc finger CCCH domain-containing protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G06410 AT5G18550 AT5G18550 AT5G18550 AT5G18550 |
| fragaria_vesca | FvH4_4g17640 |
| malus_domestica | MD13G1171100.v1.1 MD16G1172700.v1.1 |
| prunus_persica | Prupe.1G139500_v2.0.a1 |
| pyrus_communis | pycom13g14660 pycom16g14480 |
| rosa_chinensis | RchiOBHm_Chr4g0421561 |
| rosa_laevigata | RLG00000007667 |
| rosa_multiflora | Rmu_co8141282.1_g000001 Rmu_co8301593.1_g000001 Rmu_sc0010734.1_g000006 |
| rosa_roxburghii | Rroxscaffold_5G00363810 |
| rosa_rugosa | Rorug04G0172800 Rorug04G0172900 Rorug04G0173000 |
| rosa_samantha | Rh3AG118900 Rh4AG233200 Rh4BG235900 Rh4CG247500 Rh4DG231800 |
| rosa_wichuraiana | Rw4G020090 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 52 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 52 |
| AgsI | TTSAA | 3 cut(s) | 157, 184, 206 |
| AluBI | AGCT | 2 cut(s) | 179, 211 |
| AluI | AGCT | 2 cut(s) | 179, 211 |
| Alw21I | GWGCWC | 1 cut(s) | 86 |
| Alw26I | GTCTC | 1 cut(s) | 15 |
| Alw44I | GTGCAC | 1 cut(s) | 82 |
| ApaLI | GTGCAC | 1 cut(s) | 82 |
| BaeGI | GKGCMC | 1 cut(s) | 86 |
| BbsI | GAAGAC | 1 cut(s) | 63 |
| Bbv12I | GWGCWC | 1 cut(s) | 86 |
| BccI | CCATC | 1 cut(s) | 54 |
| BcoDI | GTCTC | 1 cut(s) | 15 |
| BfmI | CTRYAG | 1 cut(s) | 87 |
| BmsI | GCATC | 2 cut(s) | 156, 207 |
| BpiI | GAAGAC | 1 cut(s) | 63 |
| BsaI | GGTCTC | 1 cut(s) | 15 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 52 |
| BseGI | GGATG | 1 cut(s) | 171 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 52 |
| BseSI | GKGCMC | 1 cut(s) | 86 |
| BsiHKAI | GWGCWC | 1 cut(s) | 86 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 52 |
| BsmAI | GTCTC | 1 cut(s) | 15 |
| Bso31I | GGTCTC | 1 cut(s) | 15 |
| Bsp1286I | GDGCHC | 1 cut(s) | 86 |
| BspTNI | GGTCTC | 1 cut(s) | 15 |
| BstDEI | CTNAG | 1 cut(s) | 188 |
| BstF5I | GGATG | 1 cut(s) | 171 |
| BstMAI | GTCTC | 1 cut(s) | 15 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 217 |
| BstSFI | CTRYAG | 1 cut(s) | 87 |
| BstSLI | GKGCMC | 1 cut(s) | 86 |
| BstV2I | GAAGAC | 1 cut(s) | 63 |
| BtsCI | GGATG | 1 cut(s) | 171 |
| CviJI | RGCY | 4 cut(s) | 12, 92, 179, 211 |
| CviKI_1 | RGCY | 4 cut(s) | 12, 92, 179, 211 |
| DdeI | CTNAG | 1 cut(s) | 188 |
| Eco31I | GGTCTC | 1 cut(s) | 15 |
| FaiI | YATR | 5 cut(s) | 15, 40, 69, 224, 226 |
| FokI | GGATG | 1 cut(s) | 178 |
| HindIII | AAGCTT | 1 cut(s) | 177 |
| HinfI | GANTC | 1 cut(s) | 184 |
| Hpy166II | GTNNAC | 1 cut(s) | 84 |
| Hpy188III | TCNNGA | 1 cut(s) | 214 |
| Hpy8I | GTNNAC | 1 cut(s) | 84 |
| HpyCH4V | TGCA | 2 cut(s) | 42, 84 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 217 |
| HpyF3I | CTNAG | 1 cut(s) | 188 |
| LpnPI | CCDG | 1 cut(s) | 155 |
| LweI | GCATC | 2 cut(s) | 156, 207 |
| MboII | GAAGA | 1 cut(s) | 68 |
| MhlI | GDGCHC | 1 cut(s) | 86 |
| MluCI | AATT | 1 cut(s) | 151 |
| MmeI | TCCRAC | 1 cut(s) | 33 |
| MnlI | CCTC | 5 cut(s) | 35, 103, 134, 153, 190 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 217 |
| PfeI | GAWTC | 1 cut(s) | 184 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 52 |
| SduI | GDGCHC | 1 cut(s) | 86 |
| SetI | ASST | 5 cut(s) | 27, 126, 181, 201, 213 |
| SfaNI | GCATC | 2 cut(s) | 156, 207 |
| SfcI | CTRYAG | 1 cut(s) | 87 |
| SgeI | CNNG | 3 cut(s) | 42, 182, 188 |
| Sse9I | AATT | 1 cut(s) | 151 |
| TasI | AATT | 1 cut(s) | 151 |
| TfiI | GAWTC | 1 cut(s) | 184 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 52 |
| VneI | GTGCAC | 1 cut(s) | 82 |