MD16G1172700.v1.1

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
OG0006831
Physical Location & Seq
Forward (+)
14581115 .. 14584994
3880 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1172700.v1.1.491

Sequence Viewer

Length: 1431 bp
ATGGAGCGGTACGGTCGGACCGCAGAAGGGTCACAGTCCGATCCGTCGCGGGAGTGGAACATTCCGGGACCCGAAACAGGGCTGGAAGAGCCCATGTGGCAGTTGGGGCTCGGACCCGGGGAATCGTACCCGGAGCGACCCGACGAGGCCGATTGCAGTTACTACTTGAGGACTGGGATTTGTGGGTACGGCTCTCGGTGTCGGTACAATCATCCCCGTGATCGCAGTGTGGTTATCGGAGCGGCAAGAACTGGAGGATTAGAGTACCCTGAGCGAGCGGGCCAGCCGGTGTGCCAGTATTATATGAGGACAGGGACTTGCAAATTCGGCGCTTCGTGTAAGTACCATCATCCTAAGCAGGGAGGAAGCTCTGATAGCCCTGTTTCATTAAACTATTATGGATATCCATTGCGGCCGGGCGAAAGAGAGTGTTCCTACTATGTGAAAACTGGCCAGTGTAAGTTTGGTGCAACTTGTAAATTCCATCATCCACTGCCGGCTGGCATACAGCTTCCAGTGCCGTCACCAGTACCTCAAGTTTCACCTGTACCTGCTACACACACATTGTATCAAAATGTGCAATCTCCATCTGTTTCATCACAACAGTATGGAGTAGTATTTGCAAGGCCTCCTTTAATACCGGGGTCATATCTTCCAAACCCCTATGGTCAAGTGCTGCTTTCCCAGGGCACAATTCCTTTCTCAGGTTGGAATCCATATCAGGCACTTGCAAGCCAATTGCCCTCTCCGAGTACTCAACCTGGTGTTGGTGCTAGGACACTTTATACCCAACTATCTCCTTCAGCGCCTGCATTTACCGGAATGTATCAACCGATGCCTTTAGCTTCCTCTCTTGGTCTTCCAACTACTAGCCAGAAGGAGCAATTATTTCCAGAAAGACCTGGTCAACCAGAATGCCAGTATTATATGAGAACAGGGGATTGTAAATTTGGTTCCTCATGTAGATATCATCATCCACCAGAAGTTGTTCAATCAAAAACAACTGTTCTCCTTAGCTCCAGTGGTCTTCCTTCACGCCCGGGTGCTCCACTTTGCACTCACTATCAACAACGTGGAGCATGCAAGTTTGGATCCGCATGCAAATTCGACCACCCAATTGGAACACTCAGTTACAGCCCATCAGCGTCTTCTCTTGCTGATATGCCAGTTGCACCCTACCCAGTGGGATCATCAATTGGTACACTAGCCCCATCATCCTCATCCTCGGAGTTGCGAGCTGAGCTTAGTTCAAGCTCTGGAAAGGACTTAGTTTCAGGCAGAATGTCTTCGTCACTGAGCACTTCGAGTTTATCAGTAGGTTCAACTGTTTCTAAGAGTGGTGTTACCCCTGTGGGTGTCCAACAGTCTTCTCAGGGTTCCGGTCCTTCGAGTGGCAGTGGCAACAGTACAGAGTCTCATAGTTCAAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0097159 GO:1901363
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-CCCH

Protein Analysis

477

Amino Acids

50.65

Weight (kDa)

8.62

Isoelectric Point (pI)

67.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CCCH PF00642 48 - 73 1.8e-09 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 95 - 119 2.1e-10 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 139 - 164 1.8e-09 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 301 - 327 4.5e-10 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 348 - 372 4.3e-09 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 559
AccBSI CCGCTC 3 cut(s) 7, 242, 278
AccII CGCG 1 cut(s) 49
AciI CCGC 7 cut(s) 7, 21, 49, 242, 278, 412, 1095
AclWI GGATC 4 cut(s) 35, 1086, 1099, 1195
AcoI YGGCCR 2 cut(s) 413, 451
AcsI RAATTY 4 cut(s) 323, 479, 947, 1103
AcuI CTGAAG 1 cut(s) 786
AfiI CCNNNNNNNGG 7 cut(s) 27, 77, 78, 359, 704, 767, 1391
AgsI TTSAA 4 cut(s) 992, 1251, 1323, 1425
AjnI CCWGG 3 cut(s) 684, 760, 901
AluBI AGCT 8 cut(s) 369, 511, 845, 1017, 1238, 1243, 1254, 1428
AluI AGCT 8 cut(s) 369, 511, 845, 1017, 1238, 1243, 1254, 1428
Alw21I GWGCWC 2 cut(s) 1048, 1301
Alw26I GTCTC 1 cut(s) 1419
AlwI GGATC 4 cut(s) 35, 1086, 1099, 1195
AlwNI CAGNNNCTG 1 cut(s) 809
Ama87I CYCGRG 2 cut(s) 116, 1039
AoxI GGCC 5 cut(s) 147, 280, 413, 451, 626
ApeKI GCWGC 1 cut(s) 676
ApoI RAATTY 4 cut(s) 323, 479, 947, 1103
Asp700I GAANNNNTTC 2 cut(s) 987, 1285
AspLEI GCGC 2 cut(s) 332, 808
AspS9I GGNCC 5 cut(s) 18, 68, 113, 280, 1382
AsuC2I CCSGG 8 cut(s) 66, 117, 118, 131, 417, 642, 1040, 1041
AsuHPI GGTGA 2 cut(s) 516, 534
AvaI CYCGRG 2 cut(s) 116, 1039
AvaII GGWCC 4 cut(s) 18, 68, 113, 1382
BaeGI GKGCMC 1 cut(s) 692
BalI TGGCCA 1 cut(s) 453
BamHI GGATCC 1 cut(s) 1091
BanII GRGCYC 2 cut(s) 93, 111
BbsI GAAGAC 5 cut(s) 851, 1019, 1140, 1278, 1359
Bbv12I GWGCWC 2 cut(s) 1048, 1301
BbvI GCAGC 1 cut(s) 663
BccI CCATC 5 cut(s) 354, 492, 595, 1147, 1219
BceAI ACGGC 2 cut(s) 205, 505
BciT130I CCWGG 3 cut(s) 686, 762, 903
BcnI CCSGG 8 cut(s) 66, 117, 118, 131, 417, 642, 1040, 1041
BcoDI GTCTC 1 cut(s) 1419
BfaI CTAG 3 cut(s) 774, 870, 1205
BfoI RGCGCY 2 cut(s) 333, 809
BfuAI ACCTGC 1 cut(s) 559
BglI GCCNNNNNGGC 1 cut(s) 97
BisI GCNGC 3 cut(s) 243, 413, 677
BlpI GCTNAGC 1 cut(s) 1239
BlsI GCNGC 3 cut(s) 244, 414, 678
BmcAI AGTACT 1 cut(s) 754
Bme18I GGWCC 4 cut(s) 18, 68, 113, 1382
BmeT110I CYCGRG 2 cut(s) 116, 1039
BmgT120I GGNCC 5 cut(s) 18, 68, 113, 280, 1382
BmiI GGNNCC 6 cut(s) 69, 70, 115, 955, 1093, 1378
BmrI ACTGGG 2 cut(s) 183, 1175
BmsI GCATC 1 cut(s) 825
BmuI ACTGGG 2 cut(s) 183, 1175
BpiI GAAGAC 5 cut(s) 851, 1019, 1140, 1278, 1359
BpmI CTGGAG 2 cut(s) 273, 1003
Bpu10I CCTNAGC 3 cut(s) 270, 354, 1013
Bpu1102I GCTNAGC 1 cut(s) 1239
BpuEI CTTGAG 2 cut(s) 187, 519
BpuMI CCSGG 8 cut(s) 66, 117, 118, 131, 417, 642, 1040, 1041
BsaJI CCNNGG 7 cut(s) 116, 117, 641, 684, 685, 1039, 1224
BsaWI WCCGGW 2 cut(s) 818, 1379
Bsc4I CCNNNNNNNGG 7 cut(s) 27, 77, 78, 359, 704, 767, 1391
Bse118I RCCGGY 2 cut(s) 286, 496
Bse3DI GCAATG 1 cut(s) 407
BseBI CCWGG 3 cut(s) 686, 762, 903
BseDI CCNNGG 7 cut(s) 116, 117, 641, 684, 685, 1039, 1224
BseGI GGATG 6 cut(s) 211, 349, 487, 973, 1214, 1220
BseLI CCNNNNNNNGG 7 cut(s) 27, 77, 78, 359, 704, 767, 1391
BseMI GCAATG 1 cut(s) 407
BseMII CTCAG 6 cut(s) 261, 717, 1141, 1230, 1286, 1385
BseSI GKGCMC 1 cut(s) 692
BseX3I CGGCCG 1 cut(s) 413
BseXI GCAGC 1 cut(s) 663
Bsh1236I CGCG 1 cut(s) 49
Bsh1285I CGRYCG 2 cut(s) 16, 416
BshFI GGCC 5 cut(s) 149, 282, 415, 453, 628
BsiEI CGRYCG 2 cut(s) 16, 416
BsiHKAI GWGCWC 2 cut(s) 1048, 1301
BsiHKCI CYCGRG 2 cut(s) 116, 1039
BslFI GGGAC 2 cut(s) 81, 328
BslI CCNNNNNNNGG 7 cut(s) 27, 77, 78, 359, 704, 767, 1391
BsmAI GTCTC 1 cut(s) 1419
BsmFI GGGAC 2 cut(s) 81, 328
BsmI GAATGC 1 cut(s) 920
BsnI GGCC 5 cut(s) 149, 282, 415, 453, 628
BsoBI CYCGRG 2 cut(s) 116, 1039
Bsp1286I GDGCHC 5 cut(s) 93, 111, 692, 1048, 1301
Bsp143I GATC 4 cut(s) 40, 220, 1091, 1187
Bsp1720I GCTNAGC 1 cut(s) 1239
BspACI CCGC 7 cut(s) 7, 21, 49, 242, 278, 412, 1095
BspANI GGCC 5 cut(s) 149, 282, 415, 453, 628
BspCNI CTCAG 6 cut(s) 262, 716, 1140, 1231, 1287, 1384
BspFNI CGCG 1 cut(s) 49
BspLI GGNNCC 6 cut(s) 69, 70, 115, 955, 1093, 1378
BspMI ACCTGC 1 cut(s) 559
BspPI GGATC 4 cut(s) 35, 1086, 1099, 1195
BspQI GCTCTTC 1 cut(s) 81
BsrBI CCGCTC 3 cut(s) 7, 242, 278
BsrDI GCAATG 1 cut(s) 407
BsrFI RCCGGY 2 cut(s) 286, 496
BssAI RCCGGY 2 cut(s) 286, 496
BssECI CCNNGG 7 cut(s) 116, 117, 641, 684, 685, 1039, 1224
BssMI GATC 4 cut(s) 40, 220, 1091, 1187
Bst2UI CCWGG 3 cut(s) 686, 762, 903
Bst4CI ACNGT 7 cut(s) 14, 36, 606, 1006, 1327, 1365, 1406
Bst6I CTCTTC 1 cut(s) 81
BstENI CCTNNNNNAGG 1 cut(s) 702
BstF5I GGATG 6 cut(s) 211, 349, 487, 973, 1214, 1220
BstFNI CGCG 1 cut(s) 49
BstH2I RGCGCY 2 cut(s) 333, 809
BstHHI GCGC 2 cut(s) 332, 808
BstKTI GATC 4 cut(s) 43, 223, 1094, 1190
BstMAI GTCTC 1 cut(s) 1419
BstMBI GATC 4 cut(s) 40, 220, 1091, 1187
BstMCI CGRYCG 2 cut(s) 16, 416
BstMWI GCNNNNNNNGC 7 cut(s) 88, 97, 106, 327, 375, 517, 1240
BstNI CCWGG 3 cut(s) 686, 762, 903
BstNSI RCATGY 2 cut(s) 1083, 1101
BstSLI GKGCMC 1 cut(s) 692
BstUI CGCG 1 cut(s) 49
BstV1I GCAGC 1 cut(s) 663
BstV2I GAAGAC 5 cut(s) 851, 1019, 1140, 1278, 1359
BstX2I RGATCY 1 cut(s) 1091
BstXI CCANNNNNNTGG 1 cut(s) 1118
BstYI RGATCY 1 cut(s) 1091
BstZI CGGCCG 1 cut(s) 413
BsuRI GGCC 5 cut(s) 149, 282, 415, 453, 628
BtsCI GGATG 6 cut(s) 211, 349, 487, 973, 1214, 1220
BtsI GCAGTG 3 cut(s) 232, 491, 1402
BtsIMutI CAGTG 8 cut(s) 232, 461, 491, 522, 1027, 1188, 1292, 1402
BveI ACCTGC 1 cut(s) 559
CaiI CAGNNNCTG 1 cut(s) 809
CfoI GCGC 2 cut(s) 332, 808
Cfr10I RCCGGY 2 cut(s) 286, 496
Cfr13I GGNCC 5 cut(s) 18, 68, 113, 280, 1382
Cfr9I CCCGGG 2 cut(s) 116, 1039
CpoI CGGWCCG 1 cut(s) 18
CseI GACGC 1 cut(s) 1134
CsiI ACCWGGT 2 cut(s) 760, 901
CspI CGGWCCG 1 cut(s) 18
CviAII CATG 4 cut(s) 94, 960, 1080, 1098
DpnI GATC 4 cut(s) 42, 222, 1093, 1189
DpnII GATC 4 cut(s) 40, 220, 1091, 1187
EaeI YGGCCR 2 cut(s) 413, 451
EagI CGGCCG 1 cut(s) 413
Eam1104I CTCTTC 1 cut(s) 81
EarI CTCTTC 1 cut(s) 81
EclXI CGGCCG 1 cut(s) 413
Eco147I AGGCCT 1 cut(s) 628
Eco24I GRGCYC 2 cut(s) 93, 111
Eco32I GATATC 2 cut(s) 404, 968
Eco47I GGWCC 4 cut(s) 18, 68, 113, 1382
Eco52I CGGCCG 1 cut(s) 413
Eco57I CTGAAG 1 cut(s) 786
Eco88I CYCGRG 2 cut(s) 116, 1039
EcoNI CCTNNNNNAGG 1 cut(s) 702
EcoO109I RGGNCCY 1 cut(s) 68
EcoRII CCWGG 3 cut(s) 684, 760, 901
EcoRV GATATC 2 cut(s) 404, 968
EcoT38I GRGCYC 2 cut(s) 93, 111
FaeI CATG 4 cut(s) 97, 963, 1083, 1101
FalI AAGNNNNNCTT 4 cut(s) 616, 648, 663, 695
FaqI GGGAC 2 cut(s) 81, 328
FatI CATG 4 cut(s) 93, 959, 1079, 1097
FauI CCCGC 2 cut(s) 42, 271
Fnu4HI GCNGC 3 cut(s) 243, 413, 677
FokI GGATG 6 cut(s) 198, 336, 474, 960, 1201, 1207
FriOI GRGCYC 2 cut(s) 93, 111
Fsp4HI GCNGC 3 cut(s) 243, 413, 677
FspBI CTAG 3 cut(s) 774, 870, 1205
GlaI GCGC 2 cut(s) 331, 807
GluI GCNGC 3 cut(s) 243, 413, 677
GsuI CTGGAG 2 cut(s) 273, 1003
HaeII RGCGCY 2 cut(s) 333, 809
HaeIII GGCC 5 cut(s) 149, 282, 415, 453, 628
HgaI GACGC 1 cut(s) 1134
HhaI GCGC 2 cut(s) 332, 808
Hin1II CATG 4 cut(s) 97, 963, 1083, 1101
Hin6I GCGC 2 cut(s) 330, 806
HinP1I GCGC 2 cut(s) 330, 806
HincII GTYRAC 1 cut(s) 908
HindII GTYRAC 1 cut(s) 908
HinfI GANTC 3 cut(s) 122, 712, 1412
HphI GGTGA 2 cut(s) 516, 534
Hpy166II GTNNAC 2 cut(s) 908, 1202
Hpy188I TCNGA 7 cut(s) 18, 40, 113, 239, 373, 750, 1228
Hpy188III TCNNGA 2 cut(s) 893, 1257
Hpy8I GTNNAC 2 cut(s) 908, 1202
Hpy99I CGWCG 2 cut(s) 49, 146
HpyAV CCTTC 5 cut(s) 20, 810, 871, 1041, 1395
HpyCH4III ACNGT 7 cut(s) 14, 36, 606, 1006, 1327, 1365, 1406
HpyCH4IV ACGT 1 cut(s) 1072
HpyF10VI GCNNNNNNNGC 7 cut(s) 88, 97, 106, 327, 375, 517, 1240
HpySE526I ACGT 1 cut(s) 1072
Hsp92II CATG 4 cut(s) 97, 963, 1083, 1101
HspAI GCGC 2 cut(s) 330, 806
KflI GGGWCCC 1 cut(s) 68
KroI GCCGGC 1 cut(s) 496
KroNI GCCGGC 1 cut(s) 498
Kzo9I GATC 4 cut(s) 40, 220, 1091, 1187
LguI GCTCTTC 1 cut(s) 81
LmnI GCTCC 7 cut(s) 4, 133, 239, 880, 1022, 1051, 1076
Lsp1109I GCAGC 1 cut(s) 663
LweI GCATC 1 cut(s) 825
MabI ACCWGGT 2 cut(s) 760, 901
MaeI CTAG 3 cut(s) 774, 870, 1205
MaeII ACGT 1 cut(s) 1072
MaeIII GTNAC 6 cut(s) 30, 158, 522, 1130, 1290, 1342
MalI GATC 4 cut(s) 42, 222, 1093, 1189
MbiI CCGCTC 3 cut(s) 7, 242, 278
MboI GATC 4 cut(s) 40, 220, 1091, 1187
MboII GAAGA 7 cut(s) 98, 644, 851, 1019, 1140, 1278, 1359
MfeI CAATTG 3 cut(s) 737, 1116, 1194
MflI RGATCY 1 cut(s) 1091
MhlI GDGCHC 5 cut(s) 93, 111, 692, 1048, 1301
MlsI TGGCCA 1 cut(s) 453
MluCI AATT 9 cut(s) 323, 479, 693, 737, 884, 947, 1103, 1116, 1194
MluNI TGGCCA 1 cut(s) 453
MlyI GAGTC 1 cut(s) 1421
MmeI TCCRAC 3 cut(s) 689, 887, 1384
Mox20I TGGCCA 1 cut(s) 453
MroNI GCCGGC 1 cut(s) 496
MroXI GAANNNNTTC 2 cut(s) 987, 1285
MscI TGGCCA 1 cut(s) 453
MseI TTAA 2 cut(s) 389, 635
MslI CAYNNNNRTG 1 cut(s) 216
Msp20I TGGCCA 1 cut(s) 453
MunI CAATTG 3 cut(s) 737, 1116, 1194
Mva1269I GAATGC 1 cut(s) 920
MvaI CCWGG 3 cut(s) 686, 762, 903
MvnI CGCG 1 cut(s) 49
MwoI GCNNNNNNNGC 7 cut(s) 88, 97, 106, 327, 375, 517, 1240
NaeI GCCGGC 1 cut(s) 498
NciI CCSGG 8 cut(s) 66, 117, 118, 131, 417, 642, 1040, 1041
NdeII GATC 4 cut(s) 40, 220, 1091, 1187
NgoMIV GCCGGC 1 cut(s) 496
NlaIII CATG 4 cut(s) 97, 963, 1083, 1101
NlaIV GGNNCC 6 cut(s) 69, 70, 115, 955, 1093, 1378
NmuCI GTSAC 3 cut(s) 30, 522, 1290
NspI RCATGY 2 cut(s) 1083, 1101
PaeI GCATGC 2 cut(s) 1083, 1101
PasI CCCWGGG 1 cut(s) 685
PceI AGGCCT 1 cut(s) 628
PciSI GCTCTTC 1 cut(s) 81
PctI GAATGC 1 cut(s) 920
PdiI GCCGGC 1 cut(s) 498
PdmI GAANNNNTTC 2 cut(s) 987, 1285
PfeI GAWTC 2 cut(s) 122, 712
PflFI GACNNNGTC 1 cut(s) 903
PfoI TCCNGGA 1 cut(s) 64
PkrI GCNGC 3 cut(s) 244, 414, 678
PleI GAGTC 1 cut(s) 1420
PpsI GAGTC 1 cut(s) 1420
PpuMI RGGWCCY 1 cut(s) 68
Psp5II RGGWCCY 1 cut(s) 68
Psp6I CCWGG 3 cut(s) 684, 760, 901
PspGI CCWGG 3 cut(s) 684, 760, 901
PspN4I GGNNCC 6 cut(s) 69, 70, 115, 955, 1093, 1378
PspPI GGNCC 5 cut(s) 18, 68, 113, 280, 1382
PspPPI RGGWCCY 1 cut(s) 68
PsrI GAACNNNNNNTAC 2 cut(s) 937, 969
PstNI CAGNNNCTG 1 cut(s) 809
PsuI RGATCY 1 cut(s) 1091
PsyI GACNNNGTC 1 cut(s) 903
RseI CAYNNNNRTG 1 cut(s) 216
Rsr2I CGGWCCG 1 cut(s) 18
RsrII CGGWCCG 1 cut(s) 18
SapI GCTCTTC 1 cut(s) 81
SaqAI TTAA 2 cut(s) 389, 635
SatI GCNGC 3 cut(s) 243, 413, 677
Sau3AI GATC 4 cut(s) 40, 220, 1091, 1187
Sau96I GGNCC 5 cut(s) 18, 68, 113, 280, 1382
ScaI AGTACT 1 cut(s) 754
SchI GAGTC 1 cut(s) 1421
SduI GDGCHC 5 cut(s) 93, 111, 692, 1048, 1301
SexAI ACCWGGT 2 cut(s) 760, 901
SfaNI GCATC 1 cut(s) 825
SinI GGWCC 4 cut(s) 18, 68, 113, 1382
SmaI CCCGGG 2 cut(s) 118, 1041
SmiMI CAYNNNNRTG 1 cut(s) 216
SmlI CTYRAG 2 cut(s) 166, 534
SmoI CTYRAG 2 cut(s) 166, 534
SphI GCATGC 2 cut(s) 1083, 1101
Sse9I AATT 9 cut(s) 323, 479, 693, 737, 884, 947, 1103, 1116, 1194
SseBI AGGCCT 1 cut(s) 628
SsiI CCGC 7 cut(s) 7, 21, 49, 242, 278, 412, 1095
SspMI CTAG 3 cut(s) 774, 870, 1205
StuI AGGCCT 1 cut(s) 628
TaaI ACNGT 7 cut(s) 14, 36, 606, 1006, 1327, 1365, 1406
TaiI ACGT 1 cut(s) 1075
TaqI TCGA 3 cut(s) 1107, 1304, 1388
TasI AATT 9 cut(s) 323, 479, 693, 737, 884, 947, 1103, 1116, 1194
TatI WGTACW 2 cut(s) 752, 1406
TauI GCSGC 2 cut(s) 245, 415
TfiI GAWTC 2 cut(s) 122, 712
Tru1I TTAA 2 cut(s) 389, 635
Tru9I TTAA 2 cut(s) 389, 635
TscAI CASTG 8 cut(s) 232, 461, 498, 522, 1027, 1188, 1299, 1402
TseFI GTSAC 3 cut(s) 30, 522, 1290
TseI GCWGC 1 cut(s) 676
Tsp45I GTSAC 3 cut(s) 30, 522, 1290
TspDTI ATGAA 2 cut(s) 375, 585
TspGWI ACGGA 1 cut(s) 33
TspMI CCCGGG 2 cut(s) 116, 1039
TspRI CASTG 8 cut(s) 232, 461, 498, 522, 1027, 1188, 1299, 1402
Tth111I GACNNNGTC 1 cut(s) 903
VpaK11BI GGWCC 4 cut(s) 18, 68, 113, 1382
XagI CCTNNNNNAGG 1 cut(s) 702
XapI RAATTY 4 cut(s) 323, 479, 947, 1103
XceI RCATGY 2 cut(s) 1083, 1101
XcmI CCANNNNNNNNNTGG 2 cut(s) 100, 461
XmaI CCCGGG 2 cut(s) 116, 1039
XmnI GAANNNNTTC 2 cut(s) 987, 1285
XspI CTAG 3 cut(s) 774, 870, 1205
ZrmI AGTACT 1 cut(s) 754
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.