AT3G10010

FES

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0007319
Physical Location & Seq
Reverse (-)
3081735 .. 3088550
6816 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G10010.2

Sequence Viewer

Length: 3999 bp
ATGGAAGTGGAAGGTGAAGTGAGAGAGAAAGAAGCTAGGGTTAAAGGGAGACAACCAGAGACAGAAGTTCTACATGGTCTGCCACAAGAACAGTCAATATTTAATAACATGCAACACAACCATCAGCCTGACTCAGACAGGAGGAGGCTTAGTCTTGAAAACTTACCTGGACTATACAACATGTCTTGTACACAACTCTTGGCTCTGGCCAATGCCACAGTCGCCACAGGTTCATCAATTGGTGCATCATCATCATCGTTAAGCTCTCAGCATCCAACGGATTCTTGGATTAATAGCTGGAAGATGGACTCTAATCCGTGGACTTTGAGTAAAATGCAAAAACAACAATATGATGTGTCAACTCCGCAGAAGTTTCTTTGTGACCTTAATCTTACACCTGAAGAGTTGGTGAGCACCAGTACGCAACGAACAGAACCTGAGTCTCCTCAAATAACTTTAAAGACACCAGGAAAAAGTCTGTCTGAAACTGATCATGAGCCTCACGACCGTATCAAGAAGTCTGTTCTTGGAACTGGATCTCCTGCAGCAGTAAAGAAAAGAAAGATAGCAAGAAATGATGAGAAATCTCAGCTGGAAACACCAACACTAAAGAGAAAAAAGATCAGGCCAAAGGTTGTCCGTGAAGGCAAAACAAAAAAAGCATCATCTAAAGCAGGGATTAAAAAATCCTCTATTGCTGCTACTGCTACTAAAACTTCTGAAGAGAGCAATTATGTTCGGCCAAAAAGATTAACGAGAAGATCTATACGATTCGACTTTGACCTTCAAGAAGAAGATGAGGAATTTTGTGGAATCGATTTCACATCAGCAGGTCACGTAGAGGGTTCTTCAGGTGAAGAAAATCTAACCGATACAACACTGGGAATGTTTGGTCACGTCCCAAAGGGAAGAAGAGGGCAAAGAAGATCCAATGGCTTTAAAAAAACCGACAATGATTGCCTCAGTTCTATGTTGTCTCTTGTCAATACCGGACCAGGAAGTTTCATGGAATCAGAAGAAGATCGTCCGAGTGATTCACAAATTTCTCTGGGAAGACAGAGATCCATTATGGCAACCAGACCGCGTAACTTCCGATCGTTAAAGAAACTTTTACAAAGGATTATACCAAGCAAACGTGATAGAAAAGGATGTAAGCTTCCTCGTGGACTTCCGAAGCTTACCGTCGCATCCAAGTTGCAACTAAAAGTGTTTAGAAAGAAGCGGAGTCAAAGAAACCGTGTAGCAAGCCAGTTCAATGCAAGGATATTGGACTTGCAGTGGCGACGCCAAAATCCAACAGGTACATCGCTAGCTGATATATGGGAAAGAAGTTTGACTATTGATGCTATCACTAAGTTGTTTGAAGAATTAGACATCAACAAAGAGGGTCTTTGCCTTCCACATAATAGAGAAACTGCACTTATTCTATACAAAAAGTCGTATGAAGAGCAAAAGGCAATAGTGAAGTATAGCAAGAAGCAGAAACCGAAAGTACAATTGGATCCTGAAACGAGTCGAGTGTGGAAACTCTTAATGTCAAGTATCGACTGTGACGGTGTTGATGGATCAGATGAGGAAAAACGTAAATGGTGGGAAGAGGAGAGGAACATGTTCCATGGACGTGCAAACTCGTTCATTGCGCGAATGCGTGTTGTCCAAGGCAATAGAACTTTCTCACCTTGGAAAGGGTCAGTAGTGGATTCAGTAGTGGGAGTTTTCCTAACCCAGAATGTCGCAGACCATTCATCAAGTTCTGCATATATGGATTTAGCTGCTGAGTTTCCTGTCGAGTGGAACTTCAACAAGGGATCATGTCATGAAGAGTGGGGAAGTTCAGTAACTCAAGAAACAATACTGAATTTGGATCCAAGAACTGGAGTTTCAACTCCAAGAATTCGCAATCCAACTCGCGTCATCATAGAGGAGATTGATGATGATGAGAACGACATTGATGCTGTTTGTAGTCAGGAATCCTCTAAAACAAGTGACAGTTCCATAACTTCTGCAGACCAATCAAAAACGATGCTGCTGGATCCATTTAACACAGTTTTGATGAACGAGCAAGTTGATTCCCAAATGGTAAAAGGCAAAGGTCATATACCATACACGGATGATCTTAATGACTTGTCCCAGGGGATTTCGATGGTCTCATCTGCTTCTACTCATTGTGAGTTGAACCTAAATGAAGTACCACCTGAAGTAGAGTTGTGCAGCCATCAACAAGACCCGGAGAGTACCATTCAGACACAAGACCAGCAAGAGAGCACAAGAACGGAGGATGTGAAGAAGAATAGGAAAAAACCAACTACCTCCAAACCAAAGAAAAAGTCAAAGGAATCAGCAAAGAGCACGCAAAAGAAAAGCGTTGACTGGGATAGTTTGAGAAAGGAAGCAGAAAGTGGTGGCCGAAAGAGAGAGAGAACAGAAAGAACAATGGACACAGTTGATTGGGATGCACTTCGATGTACAGACGTACACAAGATCGCTAATATAATCATCAAACGAGGGATGAACAACATGCTTGCCGAAAGAATCAAGGCCTTCTTAAACAGACTAGTTAAAAAACATGGAAGCATTGACTTAGAGTGGCTAAGAGATGTTCCTCCTGATAAAGCCAAGGAGTATCTACTAAGCATAAACGGATTAGGATTGAAGAGTGTGGAGTGTGTTAGACTTTTGTCACTACATCAGATTGCATTCCCTGTTGACACGAATGTCGGACGCATAGCTGTAAGACTAGGATGGGTTCCCTTACAGCCATTGCCCGACGAGCTGCAAATGCATCTTTTAGAGTTGTACCCAGTTCTAGAGTCAGTTCAAAAGTACCTCTGGCCACGCCTCTGCAAGCTTGACCAAAAAACCTTGTACGAGCTGCATTACCACATGATAACATTTGGAAAGGTCTTTTGCACAAAAGTAAAACCCAATTGCAATGCATGTCCAATGAAGGCGGAGTGTCGACATTACTCTAGTGCACGTGCAAGCGCACGGCTTGCTTTACCAGAACCAGAGGAGAGTGACAGAACAAGTGTAATGATCCATGAGAGGAGATCTAAACGCAAGCCTGTTGTGGTTAATTTTCGACCATCCTTATTTCTTTATCAAGAAAAAGAGCAAGAAGCACAAAGATCCCAAAACTGTGAACCAATCATTGAGGAACCAGCATCACCAGAACCAGAGTATATAGAACATGATATTGAAGACTATCCTCGGGACAAAAACAACGTTGGAACATCAGAGGATCCTTGGGAAAATAAGGACGTAATTCCTACCATCATCCTCAACAAGGAAGCTGGTACATCACATGATTTGGTGGTCAACAAGGAAGCTGGTACGTCACATGATTTGGTGGTACTAAGCACATATGCAGCAGCAATACCTAGACGTAAACTCAAGATCAAGGAAAAGCTACGCACAGAGCACCACGTATTTGAGCTCCCTGATCACCATTCCATTCTAGAAGGGTTTGAGAGGCGAGAAGCTGAGGATATAGTCCCTTACTTGTTAGCCATTTGGACGCCAGGTGAAACCGTGAATTCCATTCAACCGCCAAAACAAAGATGTGCTTTATTTGAAAGCAATAATACATTATGCAACGAAAACAAATGTTTTCAATGCAACAAGACACGGGAAGAGGAATCACAGACTGTACGAGGAACTATATTGATACCTTGCAGAACAGCAATGAGAGGTGGATTCCCTTTGAATGGCACATACTTCCAAACTAATGAGGTTTTTGCTGACCATGACTCTAGCATAAACCCTATCGACGTCCCAACAGAACTGATATGGGATCTAAAAAGAAGAGTCGCATACTTAGGATCCTCTGTATCCTCGATTTGTAAAGGTTTATCAGTGGAAGCCATAAAATACAATTTCCAGGAAGGATATGTCTGTGTAAGGGGATTCGACAGGGAGAATCGTAAGCCAAAGAGTCTAGTGAAAAGACTGCATTGTTCTCACGTAGCAATCAGAACTAAAGAGAAGACAGAGGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0003906 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006281 GO:0006304 GO:0006305 GO:0006306 GO:0006325 GO:0006342 GO:0006349 GO:0006355 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006974 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009620 GO:0009790 GO:0009791 GO:0009793 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010154 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0010639 GO:0016043 GO:0016458 GO:0016787 GO:0016798 GO:0016799 GO:0019104 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031935 GO:0031936 GO:0032259 GO:0032501 GO:0032502 GO:0033043 GO:0033044 GO:0033554 GO:0034641 GO:0035510 GO:0040029 GO:0043076 GO:0043078 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0044728 GO:0045814 GO:0045815 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0046483 GO:0048316 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051129 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0051276 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0060968 GO:0060969 GO:0061458 GO:0065007 GO:0070988 GO:0071514 GO:0071704 GO:0071840 GO:0080090 GO:0080111 GO:0090304 GO:0098542 GO:0140097 GO:1901360 GO:1902275 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:1905268 GO:2000112 GO:2000113 GO:2001141 GO:2001251
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Perm-CXXC RRM_DME

Protein Analysis

1332

Amino Acids

151.47

Weight (kDa)

8.73

Isoelectric Point (pI)

51.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Perm-CXXC PF15629 1184 - 1216 2.1e-10 Permuted single zf-CXXC unit
RRM_DME PF15628 1219 - 1319 6.9e-50 RRM in Demeter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2714
AatII GACGTC 1 cut(s) 3774
Acc36I ACCTGC 1 cut(s) 821
AccB7I CCANNNNNTGG 1 cut(s) 1874
AccI GTMKAC 1 cut(s) 2959
AccII CGCG 3 cut(s) 1084, 1642, 1911
AciI CCGC 5 cut(s) 365, 1082, 1222, 2951, 3548
AclI AACGTT 1 cut(s) 3225
AcoI YGGCCR 4 cut(s) 207, 740, 2404, 2831
AcsI RAATTY 5 cut(s) 803, 1041, 1858, 1893, 3535
AcuI CTGAAG 4 cut(s) 420, 741, 834, 2217
AcvI CACGTG 1 cut(s) 2978
AcyI GRCGYC 3 cut(s) 1285, 3518, 3771
AfiI CCNNNNNNNGG 4 cut(s) 1685, 1874, 3286, 3707
AflIII ACRYGT 2 cut(s) 180, 1608
AhlI ACTAGT 1 cut(s) 2554
AjiI CACGTC 2 cut(s) 898, 1622
AjnI CCWGG 6 cut(s) 166, 466, 994, 2130, 3520, 3879
AjuI GAANNNNNNNTTGG 2 cut(s) 1481, 1513
AloI GAACNNNNNNTCC 2 cut(s) 523, 555
Alw21I GWGCWC 6 cut(s) 416, 2267, 2351, 2977, 3423, 3438
Alw26I GTCTC 5 cut(s) 43, 53, 447, 981, 2152
Alw44I GTGCAC 1 cut(s) 2973
AlwNI CAGNNNCTG 1 cut(s) 437
Ama87I CYCGRG 1 cut(s) 3210
AoxI GGCC 6 cut(s) 207, 626, 740, 2404, 2538, 2831
ApaLI GTGCAC 1 cut(s) 2973
ApeKI GCWGC 9 cut(s) 545, 698, 1772, 2026, 2211, 2773, 2872, 3368, 3371
ApoI RAATTY 5 cut(s) 803, 1041, 1858, 1893, 3535
ArsI GACNNNNNNTTYG 2 cut(s) 2312, 2344
AseI ATTAAT 1 cut(s) 291
Asp700I GAANNNNTTC 1 cut(s) 1610
AspLEI GCGC 2 cut(s) 1642, 2987
AspS9I GGNCC 1 cut(s) 992
AsuC2I CCSGG 1 cut(s) 2228
AsuHPI GGTGA 7 cut(s) 26, 421, 866, 1668, 3159, 3437, 3536
AsuNHI GCTAGC 1 cut(s) 1309
AvaI CYCGRG 1 cut(s) 3210
AvaII GGWCC 1 cut(s) 992
BaeGI GKGCMC 1 cut(s) 2977
BaeI ACNNNNGTAYC 2 cut(s) 493, 526
BalI TGGCCA 2 cut(s) 209, 2833
BamHI GGATCC 5 cut(s) 1501, 1864, 2032, 3241, 3821
BanII GRGCYC 1 cut(s) 3438
BauI CACGAG 1 cut(s) 1161
BbrPI CACGTG 1 cut(s) 2978
BbsI GAAGAC 3 cut(s) 1060, 3207, 3992
Bbv12I GWGCWC 6 cut(s) 416, 2267, 2351, 2977, 3423, 3438
BbvCI CCTCAGC 1 cut(s) 3483
BbvI GCAGC 9 cut(s) 557, 685, 1759, 2013, 2223, 2760, 2859, 3380, 3383
BccI CCATC 8 cut(s) 129, 298, 1556, 2137, 2223, 2736, 3094, 3281
BceAI ACGGC 1 cut(s) 3005
BcgI CGANNNNNNTGC 2 cut(s) 1934, 1968
BciT130I CCWGG 6 cut(s) 168, 468, 996, 2132, 3522, 3881
BciVI GTATCC 1 cut(s) 3841
BclI TGATCA 2 cut(s) 490, 3442
BcnI CCSGG 1 cut(s) 2228
BcoDI GTCTC 5 cut(s) 43, 53, 447, 981, 2152
BcuI ACTAGT 1 cut(s) 2554
BfmI CTRYAG 2 cut(s) 543, 2004
BfuAI ACCTGC 1 cut(s) 821
BfuI GTATCC 1 cut(s) 3841
BglII AGATCT 2 cut(s) 761, 3050
BisI GCNGC 9 cut(s) 546, 699, 1773, 2027, 2212, 2774, 2873, 3369, 3372
BlsI GCNGC 9 cut(s) 547, 700, 1774, 2028, 2213, 2775, 2874, 3370, 3373
Bme1390I CCNGG 7 cut(s) 168, 468, 996, 2132, 2228, 3522, 3881
Bme18I GGWCC 1 cut(s) 992
BmeT110I CYCGRG 1 cut(s) 3210
BmgBI CACGTC 2 cut(s) 898, 1622
BmgT120I GGNCC 1 cut(s) 992
BmiI GGNNCC 7 cut(s) 1503, 1866, 2034, 2748, 3159, 3243, 3823
BmrFI CCNGG 7 cut(s) 168, 468, 996, 2132, 2228, 3522, 3881
BmrI ACTGGG 3 cut(s) 890, 2380, 2795
BmtI GCTAGC 1 cut(s) 1313
BmuI ACTGGG 3 cut(s) 890, 2380, 2795
BoxI GACNNNNGTC 1 cut(s) 2677
BpiI GAAGAC 3 cut(s) 1060, 3207, 3992
BpmI CTGGAG 1 cut(s) 1896
Bpu10I CCTNAGC 1 cut(s) 3483
BpuEI CTTGAG 2 cut(s) 1827, 3377
BpuMI CCSGG 1 cut(s) 2228
Bsa29I ATCGAT 1 cut(s) 816
BsaAI YACGTR 4 cut(s) 838, 2978, 3427, 3964
BsaHI GRCGYC 3 cut(s) 1285, 3518, 3771
BsaI GGTCTC 1 cut(s) 2152
BsaJI CCNNGG 9 cut(s) 317, 1615, 1657, 1679, 2130, 2131, 2616, 3209, 3245
BsaWI WCCGGW 1 cut(s) 989
BsaXI ACNNNNNCTCC 4 cut(s) 136, 166, 523, 553
Bsc4I CCNNNNNNNGG 4 cut(s) 1685, 1874, 3286, 3707
Bse1I ACTGG 7 cut(s) 417, 538, 885, 1249, 1879, 2375, 2801
Bse3DI GCAATG 4 cut(s) 1635, 2759, 2938, 3690
BseBI CCWGG 6 cut(s) 168, 468, 996, 2132, 3522, 3881
BseCI ATCGAT 1 cut(s) 816
BseDI CCNNGG 9 cut(s) 317, 1615, 1657, 1679, 2130, 2131, 2616, 3209, 3245
BseLI CCNNNNNNNGG 4 cut(s) 1685, 1874, 3286, 3707
BseMI GCAATG 4 cut(s) 1635, 2759, 2938, 3690
BseMII CTCAG 7 cut(s) 147, 281, 429, 602, 976, 1767, 3474
BseNI ACTGG 7 cut(s) 417, 538, 885, 1249, 1879, 2375, 2801
BseRI GAGGAG 6 cut(s) 157, 435, 1613, 1937, 3026, 3061
BseSI GKGCMC 1 cut(s) 2977
BseXI GCAGC 9 cut(s) 557, 685, 1759, 2013, 2223, 2760, 2859, 3380, 3383
BsgI GTGCAG 2 cut(s) 1401, 2230
Bsh1236I CGCG 3 cut(s) 1084, 1642, 1911
Bsh1285I CGRYCG 2 cut(s) 508, 1097
BshFI GGCC 6 cut(s) 209, 628, 742, 2406, 2540, 2833
BshVI ATCGAT 1 cut(s) 816
BsiEI CGRYCG 2 cut(s) 508, 1097
BsiHKAI GWGCWC 6 cut(s) 416, 2267, 2351, 2977, 3423, 3438
BsiHKCI CYCGRG 1 cut(s) 3210
BsiSI CCGG 2 cut(s) 990, 2228
BslFI GGGAC 5 cut(s) 884, 2113, 3227, 3479, 3758
BslI CCNNNNNNNGG 4 cut(s) 1685, 1874, 3286, 3707
BsmAI GTCTC 5 cut(s) 43, 53, 447, 981, 2152
BsmFI GGGAC 5 cut(s) 884, 2113, 3227, 3479, 3758
BsmI GAATGC 2 cut(s) 1650, 2696
BsnI GGCC 6 cut(s) 209, 628, 742, 2406, 2540, 2833
Bso31I GGTCTC 1 cut(s) 2152
BsoBI CYCGRG 1 cut(s) 3210
Bsp1286I GDGCHC 6 cut(s) 416, 2267, 2351, 2977, 3423, 3438
Bsp1407I TGTACA 2 cut(s) 188, 2465
Bsp19I CCATGG 1 cut(s) 1615
BspACI CCGC 5 cut(s) 365, 1082, 1222, 2951, 3548
BspANI GGCC 6 cut(s) 209, 628, 742, 2406, 2540, 2833
BspCNI CTCAG 7 cut(s) 146, 280, 430, 601, 975, 1768, 3475
BspDI ATCGAT 1 cut(s) 816
BspFNI CGCG 3 cut(s) 1084, 1642, 1911
BspHI TCATGA 2 cut(s) 493, 1816
BspLI GGNNCC 7 cut(s) 1503, 1866, 2034, 2748, 3159, 3243, 3823
BspMAI CTGCAG 2 cut(s) 547, 2008
BspMI ACCTGC 1 cut(s) 821
BspOI GCTAGC 1 cut(s) 1313
BspQI GCTCTTC 1 cut(s) 1440
BspTNI GGTCTC 1 cut(s) 2152
BsrDI GCAATG 4 cut(s) 1635, 2759, 2938, 3690
BsrGI TGTACA 2 cut(s) 188, 2465
BsrI ACTGG 7 cut(s) 417, 538, 885, 1249, 1879, 2375, 2801
BssECI CCNNGG 9 cut(s) 317, 1615, 1657, 1679, 2130, 2131, 2616, 3209, 3245
BssNI GRCGYC 3 cut(s) 1285, 3518, 3771
BssSI CACGAG 1 cut(s) 1161
BssT1I CCWWGG 5 cut(s) 1615, 1657, 1679, 2616, 3245
Bst2BI CACGAG 1 cut(s) 1161
Bst2UI CCWGG 6 cut(s) 168, 468, 996, 2132, 3522, 3881
Bst6I CTCTTC 9 cut(s) 396, 717, 907, 1440, 1590, 1815, 2648, 3627, 3799
BstACI GRCGYC 3 cut(s) 1285, 3518, 3771
BstAPI GCANNNNNTGC 1 cut(s) 2993
BstAUI TGTACA 2 cut(s) 188, 2465
BstBAI YACGTR 4 cut(s) 838, 2978, 3427, 3964
BstC8I GCNNGC 8 cut(s) 1246, 1311, 2351, 2523, 2846, 2983, 2994, 3062
BstDSI CCRYGG 2 cut(s) 317, 1615
BstENI CCTNNNNNAGG 2 cut(s) 1683, 3284
BstFNI CGCG 3 cut(s) 1084, 1642, 1911
BstHHI GCGC 2 cut(s) 1642, 2987
BstMAI GTCTC 5 cut(s) 43, 53, 447, 981, 2152
BstMCI CGRYCG 2 cut(s) 508, 1097
BstMWI GCNNNNNNNGC 5 cut(s) 221, 704, 2770, 2779, 2993
BstNI CCWGG 6 cut(s) 168, 468, 996, 2132, 3522, 3881
BstNSI RCATGY 5 cut(s) 112, 184, 1612, 2521, 2940
BstPAI GACNNNNGTC 1 cut(s) 2677
BstSCI CCNGG 7 cut(s) 166, 466, 994, 2130, 2226, 3520, 3879
BstSFI CTRYAG 2 cut(s) 543, 2004
BstSLI GKGCMC 1 cut(s) 2977
BstUI CGCG 3 cut(s) 1084, 1642, 1911
BstV1I GCAGC 9 cut(s) 557, 685, 1759, 2013, 2223, 2760, 2859, 3380, 3383
BstV2I GAAGAC 3 cut(s) 1060, 3207, 3992
Bsu15I ATCGAT 1 cut(s) 816
BsuI GTATCC 1 cut(s) 3841
BsuRI GGCC 6 cut(s) 209, 628, 742, 2406, 2540, 2833
BsuTUI ATCGAT 1 cut(s) 816
BtgI CCRYGG 2 cut(s) 317, 1615
BtgZI GCGATG 1 cut(s) 1290
BtrI CACGTC 2 cut(s) 898, 1622
BtsI GCAGTG 1 cut(s) 1283
BtsIMutI CAGTG 3 cut(s) 878, 1283, 3861
BveI ACCTGC 1 cut(s) 821
Cac8I GCNNGC 8 cut(s) 1246, 1311, 2351, 2523, 2846, 2983, 2994, 3062
CaiI CAGNNNCTG 1 cut(s) 437
CciI TCATGA 2 cut(s) 493, 1816
CfoI GCGC 2 cut(s) 1642, 2987
Cfr13I GGNCC 1 cut(s) 992
ClaI ATCGAT 1 cut(s) 816
CseI GACGC 4 cut(s) 1293, 1900, 2730, 3526
DraI TTTAAA 2 cut(s) 459, 940
DrdI GACNNNNNNGTC 1 cut(s) 2714
DseDI GACNNNNNNGTC 1 cut(s) 2714
EaeI YGGCCR 4 cut(s) 207, 740, 2404, 2831
Eam1104I CTCTTC 9 cut(s) 396, 717, 907, 1440, 1590, 1815, 2648, 3627, 3799
EarI CTCTTC 9 cut(s) 396, 717, 907, 1440, 1590, 1815, 2648, 3627, 3799
EciI GGCGGA 1 cut(s) 2966
Ecl136II GAGCTC 1 cut(s) 3436
Eco130I CCWWGG 5 cut(s) 1615, 1657, 1679, 2616, 3245
Eco147I AGGCCT 1 cut(s) 2540
Eco24I GRGCYC 1 cut(s) 3438
Eco31I GGTCTC 1 cut(s) 2152
Eco47I GGWCC 1 cut(s) 992
Eco53kI GAGCTC 1 cut(s) 3436
Eco57I CTGAAG 4 cut(s) 420, 741, 834, 2217
Eco72I CACGTG 1 cut(s) 2978
Eco88I CYCGRG 1 cut(s) 3210
EcoICRI GAGCTC 1 cut(s) 3436
EcoNI CCTNNNNNAGG 2 cut(s) 1683, 3284
EcoRI GAATTC 2 cut(s) 1893, 3535
EcoRII CCWGG 6 cut(s) 166, 466, 994, 2130, 3520, 3879
EcoT14I CCWWGG 5 cut(s) 1615, 1657, 1679, 2616, 3245
EcoT22I ATGCAT 2 cut(s) 2784, 2938
EcoT38I GRGCYC 1 cut(s) 3438
ErhI CCWWGG 5 cut(s) 1615, 1657, 1679, 2616, 3245
FalI AAGNNNNNCTT 6 cut(s) 1374, 1406, 2528, 2560, 3550, 3582
FaqI GGGAC 5 cut(s) 884, 2113, 3227, 3479, 3758
FauNDI CATATG 1 cut(s) 3364
FbaI TGATCA 2 cut(s) 490, 3442
FblI GTMKAC 1 cut(s) 2959
Fnu4HI GCNGC 9 cut(s) 546, 699, 1773, 2027, 2212, 2774, 2873, 3369, 3372
FriOI GRGCYC 1 cut(s) 3438
Fsp4HI GCNGC 9 cut(s) 546, 699, 1773, 2027, 2212, 2774, 2873, 3369, 3372
GlaI GCGC 2 cut(s) 1641, 2986
GluI GCNGC 9 cut(s) 546, 699, 1773, 2027, 2212, 2774, 2873, 3369, 3372
GsuI CTGGAG 1 cut(s) 1896
HaeIII GGCC 6 cut(s) 209, 628, 742, 2406, 2540, 2833
HapII CCGG 2 cut(s) 990, 2228
HgaI GACGC 4 cut(s) 1293, 1900, 2730, 3526
HhaI GCGC 2 cut(s) 1642, 2987
Hin1I GRCGYC 3 cut(s) 1285, 3518, 3771
Hin6I GCGC 2 cut(s) 1640, 2985
HinP1I GCGC 2 cut(s) 1640, 2985
HincII GTYRAC 5 cut(s) 360, 2368, 2707, 2960, 3319
HindII GTYRAC 5 cut(s) 360, 2368, 2707, 2960, 3319
HindIII AAGCTT 3 cut(s) 1154, 1175, 2846
HpaII CCGG 2 cut(s) 990, 2228
HphI GGTGA 7 cut(s) 26, 421, 866, 1668, 3159, 3437, 3536
Hpy99I CGWCG 4 cut(s) 1187, 1287, 2771, 3773
HpyAV CCTTC 8 cut(s) 5, 638, 794, 1406, 2551, 2941, 3455, 3878
HpyF10VI GCNNNNNNNGC 5 cut(s) 221, 704, 2770, 2779, 2993
Hsp92I GRCGYC 3 cut(s) 1285, 3518, 3771
HspAI GCGC 2 cut(s) 1640, 2985
Ksp22I TGATCA 2 cut(s) 490, 3442
LguI GCTCTTC 1 cut(s) 1440
LmnI GCTCC 1 cut(s) 3441
Lsp1109I GCAGC 9 cut(s) 557, 685, 1759, 2013, 2223, 2760, 2859, 3380, 3383
MfeI CAATTG 3 cut(s) 237, 1496, 2926
MhlI GDGCHC 6 cut(s) 416, 2267, 2351, 2977, 3423, 3438
MlsI TGGCCA 2 cut(s) 209, 2833
MluNI TGGCCA 2 cut(s) 209, 2833
MlyI GAGTC 9 cut(s) 125, 302, 449, 1234, 1522, 2819, 3743, 3816, 3943
MmeI TCCRAC 5 cut(s) 299, 1319, 1928, 2698, 3208
Mox20I TGGCCA 2 cut(s) 209, 2833
Mph1103I ATGCAT 2 cut(s) 2784, 2938
MroXI GAANNNNTTC 1 cut(s) 1610
MscI TGGCCA 2 cut(s) 209, 2833
MslI CAYNNNNRTG 2 cut(s) 1620, 2461
Msp20I TGGCCA 2 cut(s) 209, 2833
MspA1I CMGCKG 1 cut(s) 592
MspI CCGG 2 cut(s) 990, 2228
MspR9I CCNGG 7 cut(s) 168, 468, 996, 2132, 2228, 3522, 3881
MunI CAATTG 3 cut(s) 237, 1496, 2926
Mva1269I GAATGC 2 cut(s) 1650, 2696
MvaI CCWGG 6 cut(s) 168, 468, 996, 2132, 3522, 3881
MvnI CGCG 3 cut(s) 1084, 1642, 1911
MwoI GCNNNNNNNGC 5 cut(s) 221, 704, 2770, 2779, 2993
NciI CCSGG 1 cut(s) 2228
NcoI CCATGG 1 cut(s) 1615
NdeI CATATG 1 cut(s) 3364
NheI GCTAGC 1 cut(s) 1309
NlaIV GGNNCC 7 cut(s) 1503, 1866, 2034, 2748, 3159, 3243, 3823
NmuCI GTSAC 8 cut(s) 380, 833, 893, 1550, 1985, 2679, 3017, 3336
NsiI ATGCAT 2 cut(s) 2784, 2938
NspI RCATGY 5 cut(s) 112, 184, 1612, 2521, 2940
PagI TCATGA 2 cut(s) 493, 1816
PasI CCCWGGG 1 cut(s) 2131
PceI AGGCCT 1 cut(s) 2540
PciI ACATGT 2 cut(s) 180, 1608
PciSI GCTCTTC 1 cut(s) 1440
PctI GAATGC 2 cut(s) 1650, 2696
PdmI GAANNNNTTC 1 cut(s) 1610
PflMI CCANNNNNTGG 1 cut(s) 1874
PfoI TCCNGGA 1 cut(s) 3879
PkrI GCNGC 9 cut(s) 547, 700, 1774, 2028, 2213, 2775, 2874, 3370, 3373
Ple19I CGATCG 1 cut(s) 1097
PleI GAGTC 9 cut(s) 125, 302, 448, 1233, 1521, 2818, 3743, 3815, 3942
PmaCI CACGTG 1 cut(s) 2978
PmlI CACGTG 1 cut(s) 2978
PpsI GAGTC 9 cut(s) 125, 302, 448, 1233, 1521, 2818, 3743, 3815, 3942
Ppu21I YACGTR 4 cut(s) 838, 2978, 3427, 3964
PscI ACATGT 2 cut(s) 180, 1608
PshAI GACNNNNGTC 1 cut(s) 2677
PshBI ATTAAT 1 cut(s) 291
Psp124BI GAGCTC 1 cut(s) 3438
Psp1406I AACGTT 1 cut(s) 3225
Psp6I CCWGG 6 cut(s) 166, 466, 994, 2130, 3520, 3879
PspCI CACGTG 1 cut(s) 2978
PspGI CCWGG 6 cut(s) 166, 466, 994, 2130, 3520, 3879
PspN4I GGNNCC 7 cut(s) 1503, 1866, 2034, 2748, 3159, 3243, 3823
PspPI GGNCC 1 cut(s) 992
PstI CTGCAG 2 cut(s) 547, 2008
PstNI CAGNNNCTG 1 cut(s) 437
PvuI CGATCG 1 cut(s) 1097
PvuII CAGCTG 1 cut(s) 592
RseI CAYNNNNRTG 2 cut(s) 1620, 2461
SacI GAGCTC 1 cut(s) 3438
SalI GTCGAC 1 cut(s) 2958
SapI GCTCTTC 1 cut(s) 1440
SatI GCNGC 9 cut(s) 546, 699, 1773, 2027, 2212, 2774, 2873, 3369, 3372
Sau96I GGNCC 1 cut(s) 992
SchI GAGTC 9 cut(s) 125, 302, 449, 1234, 1522, 2819, 3743, 3816, 3943
ScrFI CCNGG 7 cut(s) 168, 468, 996, 2132, 2228, 3522, 3881
SduI GDGCHC 6 cut(s) 416, 2267, 2351, 2977, 3423, 3438
SfcI CTRYAG 2 cut(s) 543, 2004
SinI GGWCC 1 cut(s) 992
SmiMI CAYNNNNRTG 2 cut(s) 1620, 2461
SmlI CTYRAG 2 cut(s) 1842, 3392
SmoI CTYRAG 2 cut(s) 1842, 3392
SpeI ACTAGT 1 cut(s) 2554
SseBI AGGCCT 1 cut(s) 2540
SsiI CCGC 5 cut(s) 365, 1082, 1222, 2951, 3548
SspI AATATT 1 cut(s) 99
SstI GAGCTC 1 cut(s) 3438
StuI AGGCCT 1 cut(s) 2540
StyD4I CCNGG 7 cut(s) 166, 466, 994, 2130, 2226, 3520, 3879
StyI CCWWGG 5 cut(s) 1615, 1657, 1679, 2616, 3245
TatI WGTACW 3 cut(s) 188, 1492, 2465
TscAI CASTG 3 cut(s) 885, 1283, 3861
TseFI GTSAC 8 cut(s) 380, 833, 893, 1550, 1985, 2679, 3017, 3336
TseI GCWGC 9 cut(s) 545, 698, 1772, 2026, 2211, 2773, 2872, 3368, 3371
Tsp45I GTSAC 8 cut(s) 380, 833, 893, 1550, 1985, 2679, 3017, 3336
TspGWI ACGGA 6 cut(s) 293, 306, 629, 2123, 2288, 2655
TspRI CASTG 3 cut(s) 885, 1283, 3861
Van91I CCANNNNNTGG 1 cut(s) 1874
VneI GTGCAC 1 cut(s) 2973
VpaK11BI GGWCC 1 cut(s) 992
VspI ATTAAT 1 cut(s) 291
XagI CCTNNNNNAGG 2 cut(s) 1683, 3284
XapI RAATTY 5 cut(s) 803, 1041, 1858, 1893, 3535
XbaI TCTAGA 2 cut(s) 2806, 3457
XceI RCATGY 5 cut(s) 112, 184, 1612, 2521, 2940
XcmI CCANNNNNNNNNTGG 1 cut(s) 282
XmiI GTMKAC 1 cut(s) 2959
XmnI GAANNNNTTC 1 cut(s) 1610
ZraI GACGTC 1 cut(s) 3772
Zsp2I ATGCAT 2 cut(s) 2784, 2938
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.