Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0005887

Physical Location & Seq

Genomic Coordinates Reverse (-)

3103880 .. 3106826

Gene Structure 2947 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G10070.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1620 bp

ATGGATCAGCCACGGCAAAGCTCGACGGCGTCTCAGCCACCGGAAACACCTCCTCAGCCGTCGGATTCGAAACCATCGACTTTAACACAGATTCAACCAACGCCTTCCACAAATCCGAGTCCCTCCTCCGTTGTTTCCTCTATTCCCTCTTCCCCAGCTCCACAATCACCATCGCTCAATCCAAACCCTAATCCTCCTCAATACACGCGTCCGGTGACATCTCCGGCGACGCAACAGCAGCAACATCTCTCCCAGCCTTTAGTACGGCCGCCTCCGCAGGCGTACTCTAGACCATGGCAACAACACTCCTCTTACACTCACTTCTCCTCCGCTTCGTCGCCATTGTTATCTTCCTCATCAGCGCCAGCCTCTTCGTCTTCGTCTTTACCTATTAGTGGGCAACAAAGAGGTGGTATGGCGATTGGCGTTCCGGCTTCCCCAATTCCGAGTCCTTCTCCTACACCTTCTCAACATTCGCCTTCTGCTTTTCCCGGCTCTTTTGGGCAACAATACGGCGGATTAGGTCGTGGAACTGTTGGAATGTCAGAAGCTACGTCCAATACAAGTTCCCCTCAGGTTAGAATGATGCAAGGAACTCAGGGAATTGGGATGATGGGAACACTTGGCTCAGGTTCCCAAATAAGGCCGAGTGGGATGACTCAGCACCAACAGAGACCAACTCAATCGTCTCTAAGGCCAGCTTCCTCCACAAGTACCCAATCTCCTGTTGCTCAAAACTTTCAAGGACATAGCCTTATGAGACCTTCACCTATTAGCTCTCCTAATGTCCAATCTACTGGTGCATCACAACAAAGCTTGCAAGCTATCAATCAACCTTGGTTATCATCTACTCCCCAAGGGAAGCCGCCTTTGCCACCTCCTTCGTATAGACCACAAGTAAATTCTCCCTCTATGCAACAAAGACCTCATATTCCTCAGCAACATATTTCTACGTCAGCAGCAACTCCACAGCCTCAGCAACAACAATCTCAACAACAACATCAGCCTCAAGAGCAACTTCAACAATTGAGATCTCCGCAGCAGCCTTTAGCTCACCCACATCAACCAACCCGGGTCCAAGGTTTGGTAAATCAGAAAGTTACTTCTCCGGTAATGCCGAGCCAGCCTCCTGTGGCTCAACCAGGAAACCATGCTAAAACAGTTTCTGCAGAGACCGAGCCGTCTGATGATCGTATCCTGGGGAAACGAAGCATCCATGAGCTACTTCAACAGATTGACCCGTCAGAGAAATTGGATCCAGAGGTTGAAGACATCCTTTCTGATATTGCTGAAGATTTTGTGGAGTCAATCACAACTTTTGGCTGTTCTTTAGCCAAGCATAGAAAGTCAGATATTCTAGAGGCTAAGGACATCTTGCTCCATGTTGAAAGAAACTGGAATATTAGGCCTCCTGGTTTTAGCAGTGATGAGTTCAAGACATTTCGGAAGCCATTGACAACAGATATTCACAAAGAGCGACTTGCGGCTATAAAGAAGTCGGTCACGGCAACAGAAGCAGCAAACGCCAGGAATCAGTTTGGGCATGGGACTGCTAATGCAAGAGGCGGTCAGGCAAAGACACCTTCTAATCCCATGGGCTCTACAACTTTCAATCACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000123 GO:0000124 GO:0000428 GO:0001085 GO:0001102 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0005669 GO:0006139 GO:0006325 GO:0006351 GO:0006352 GO:0006366 GO:0006367 GO:0006464 GO:0006473 GO:0006475 GO:0006725 GO:0006807 GO:0006996 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016569 GO:0016570 GO:0016573 GO:0016591 GO:0017025 GO:0018130 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019438 GO:0019538 GO:0022607 GO:0030880 GO:0031248 GO:0031974 GO:0031981 GO:0032774 GO:0032991 GO:0033613 GO:0034622 GO:0034641 GO:0034645 GO:0034654 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0043933 GO:0043966 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044798 GO:0046483 GO:0051123 GO:0051276 GO:0055029 GO:0061695 GO:0065003 GO:0065004 GO:0070013 GO:0070461 GO:0070897 GO:0071704 GO:0071824 GO:0071840 GO:0090304 GO:0090575 GO:0097159 GO:0097659 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901576 GO:1902493 GO:1902494 GO:1905368 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko03022 map03022

Pfam Domains

Protein Families

TFIID_20kDa

Protein Analysis

539

Amino Acids

57.71

Weight (kDa)

9.82

Isoelectric Point (pI)

81.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TFIID_20kDa	PF03847	401 - 468	1.5e-32	Transcription initiation factor TFIID subunit A

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005887)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10070
fragaria_vesca	FvH4_6g18380 FvH4_6g18380 FvH4_6g18380 FvH4_6g18380 FvH4_6g18380 FvH4_6g18380
malus_domestica	MD12G1023000.v1.1 MD14G1020000.v1.1
prunus_persica	Prupe.7G113600_v2.0.a1
pyrus_communis	pycom12g02150 pycom14g01960
rosa_chinensis	RchiOBHm_Chr3g0472861
rosa_laevigata	RLG00000024050
rosa_multiflora	Rmu_sc0020146.1_g000004
rosa_roxburghii	Rroxscaffold_6G00408550
rosa_rugosa	Rorug03G0128200 Rorug03G0128300 Rorug03G0128400 Rorug03G0128500 Rorug03G0128600 Rorug03G0128700 Rorug03G0128800
rosa_samantha	Rh3AG180900 Rh3BG207100 Rh3CG204300 Rh3DG168800
rosa_wichuraiana	Rw3G016210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1180
AccB7I	CCANNNNNTGG	1 cut(s)	1084
AccII	CGCG	1 cut(s)	208
AciI	CCGC	8 cut(s)	269, 275, 330, 516, 866, 1037, 1484, 1566
AclWI	GGATC	3 cut(s)	12, 1250, 1263
AcoI	YGGCCR	1 cut(s)	266
AcsI	RAATTY	1 cut(s)	901
AcuI	CTGAAG	1 cut(s)	1311
AcyI	GRCGYC	1 cut(s)	29
AfaI	GTAC	3 cut(s)	264, 284, 715
AfiI	CCNNNNNNNGG	3 cut(s)	395, 642, 1084
AflIII	ACRYGT	1 cut(s)	206
AgsI	TTSAA	8 cut(s)	95, 743, 1022, 1229, 1268, 1388, 1435, 1612
AjnI	CCWGG	4 cut(s)	1141, 1197, 1411, 1526
AluBI	AGCT	9 cut(s)	21, 158, 551, 701, 777, 816, 824, 1052, 1222
AluI	AGCT	9 cut(s)	21, 158, 551, 701, 777, 816, 824, 1052, 1222
Alw26I	GTCTC	5 cut(s)	36, 667, 693, 754, 1166
AlwI	GGATC	3 cut(s)	12, 1250, 1263
AlwNI	CAGNNNCTG	1 cut(s)	1166
Ama87I	CYCGRG	1 cut(s)	1071
AoxI	GGCC	4 cut(s)	266, 644, 695, 1406
ApeKI	GCWGC	5 cut(s)	238, 959, 1039, 1042, 1517
ApoI	RAATTY	1 cut(s)	901
AspLEI	GCGC	1 cut(s)	364
AspS9I	GGNCC	1 cut(s)	1075
AsuC2I	CCSGG	3 cut(s)	492, 1072, 1073
AsuHPI	GGTGA	4 cut(s)	159, 226, 759, 1046
AsuII	TTCGAA	1 cut(s)	68
AvaI	CYCGRG	1 cut(s)	1071
AvaII	GGWCC	1 cut(s)	1075
AxyI	CCTNAGG	1 cut(s)	573
BamHI	GGATCC	1 cut(s)	1255
BanII	GRGCYC	1 cut(s)	1601
BbsI	GAAGAC	2 cut(s)	369, 1275
BbvCI	CCTCAGC	3 cut(s)	54, 936, 975
BbvI	GCAGC	5 cut(s)	250, 971, 1051, 1054, 1529
BccI	CCATC	3 cut(s)	82, 178, 607
BceAI	ACGGC	7 cut(s)	29, 42, 43, 281, 529, 1165, 1521
BciT130I	CCWGG	4 cut(s)	1143, 1199, 1413, 1528
BciVI	GTATCC	1 cut(s)	1205
BcnI	CCSGG	3 cut(s)	492, 1072, 1073
BcoDI	GTCTC	5 cut(s)	36, 667, 693, 754, 1166
BfaI	CTAG	2 cut(s)	288, 1358
BfmI	CTRYAG	1 cut(s)	1167
BfoI	RGCGCY	1 cut(s)	365
BfuI	GTATCC	1 cut(s)	1205
BglII	AGATCT	1 cut(s)	1031
BisI	GCNGC	8 cut(s)	239, 269, 866, 960, 1040, 1043, 1485, 1518
BlsI	GCNGC	8 cut(s)	240, 270, 867, 961, 1041, 1044, 1486, 1519
Bme1390I	CCNGG	7 cut(s)	492, 1072, 1073, 1143, 1199, 1413, 1528
Bme18I	GGWCC	1 cut(s)	1075
BmeT110I	CYCGRG	1 cut(s)	1071
BmgT120I	GGNCC	1 cut(s)	1075
BmiI	GGNNCC	3 cut(s)	634, 1076, 1257
BmrFI	CCNGG	7 cut(s)	492, 1072, 1073, 1143, 1199, 1413, 1528
BmsI	GCATC	3 cut(s)	576, 812, 1221
BpiI	GAAGAC	2 cut(s)	369, 1275
BplI	GAGNNNNNCTC	6 cut(s)	439, 471, 664, 696, 1111, 1143
Bpu10I	CCTNAGC	5 cut(s)	54, 628, 936, 975, 1365
Bpu14I	TTCGAA	1 cut(s)	68
BpuEI	CTTGAG	1 cut(s)	993
BpuMI	CCSGG	3 cut(s)	492, 1072, 1073
BsaHI	GRCGYC	1 cut(s)	29
BsaI	GGTCTC	3 cut(s)	667, 754, 1166
BsaJI	CCNNGG	8 cut(s)	11, 293, 836, 856, 1071, 1078, 1198, 1593
BsaWI	WCCGGW	3 cut(s)	40, 211, 1108
BsaXI	ACNNNNNCTCC	4 cut(s)	311, 341, 706, 736
Bsc4I	CCNNNNNNNGG	3 cut(s)	395, 642, 1084
Bse1I	ACTGG	2 cut(s)	802, 1400
Bse21I	CCTNAGG	1 cut(s)	573
BseBI	CCWGG	4 cut(s)	1143, 1199, 1413, 1528
BseDI	CCNNGG	8 cut(s)	11, 293, 836, 856, 1071, 1078, 1198, 1593
BseGI	GGATG	4 cut(s)	615, 660, 1212, 1272
BseLI	CCNNNNNNNGG	3 cut(s)	395, 642, 1084
BseMII	CTCAG	8 cut(s)	47, 68, 587, 611, 642, 674, 950, 989
BseNI	ACTGG	2 cut(s)	802, 1400
BseRI	GAGGAG	5 cut(s)	42, 115, 186, 298, 316
BseX3I	CGGCCG	1 cut(s)	266
BseXI	GCAGC	5 cut(s)	250, 971, 1051, 1054, 1529
BseYI	CCCAGC	2 cut(s)	154, 252
Bsh1236I	CGCG	1 cut(s)	208
Bsh1285I	CGRYCG	1 cut(s)	269
BshFI	GGCC	4 cut(s)	268, 646, 697, 1408
BsiEI	CGRYCG	1 cut(s)	269
BsiHKCI	CYCGRG	1 cut(s)	1071
BsiSI	CCGG	7 cut(s)	41, 212, 224, 431, 492, 1072, 1109
BslFI	GGGAC	2 cut(s)	105, 1561
BslI	CCNNNNNNNGG	3 cut(s)	395, 642, 1084
BsmAI	GTCTC	5 cut(s)	36, 667, 693, 754, 1166
BsmBI	CGTCTC	2 cut(s)	36, 693
BsmFI	GGGAC	2 cut(s)	105, 1561
BsnI	GGCC	4 cut(s)	268, 646, 697, 1408
Bso31I	GGTCTC	3 cut(s)	667, 754, 1166
BsoBI	CYCGRG	1 cut(s)	1071
Bsp119I	TTCGAA	1 cut(s)	68
Bsp1286I	GDGCHC	1 cut(s)	1601
Bsp143I	GATC	4 cut(s)	4, 1031, 1189, 1255
Bsp19I	CCATGG	2 cut(s)	293, 1593
BspACI	CCGC	8 cut(s)	269, 275, 330, 516, 866, 1037, 1484, 1566
BspANI	GGCC	4 cut(s)	268, 646, 697, 1408
BspCNI	CTCAG	8 cut(s)	46, 67, 586, 610, 641, 673, 949, 988
BspFNI	CGCG	1 cut(s)	208
BspLI	GGNNCC	3 cut(s)	634, 1076, 1257
BspMAI	CTGCAG	1 cut(s)	1171
BspPI	GGATC	3 cut(s)	12, 1250, 1263
BspT104I	TTCGAA	1 cut(s)	68
BspTNI	GGTCTC	3 cut(s)	667, 754, 1166
BsrI	ACTGG	2 cut(s)	802, 1400
BssECI	CCNNGG	8 cut(s)	11, 293, 836, 856, 1071, 1078, 1198, 1593
BssMI	GATC	4 cut(s)	4, 1031, 1189, 1255
BssNI	GRCGYC	1 cut(s)	29
BssT1I	CCWWGG	5 cut(s)	293, 836, 856, 1078, 1593
Bst2UI	CCWGG	4 cut(s)	1143, 1199, 1413, 1528
Bst4CI	ACNGT	2 cut(s)	535, 1162
Bst6I	CTCTTC	2 cut(s)	154, 376
BstACI	GRCGYC	1 cut(s)	29
BstBI	TTCGAA	1 cut(s)	68
BstC8I	GCNNGC	6 cut(s)	279, 366, 699, 818, 822, 1124
BstDSI	CCRYGG	3 cut(s)	11, 293, 1593
BstF5I	GGATG	4 cut(s)	615, 660, 1212, 1272
BstFNI	CGCG	1 cut(s)	208
BstH2I	RGCGCY	1 cut(s)	365
BstHHI	GCGC	1 cut(s)	364
BstKTI	GATC	4 cut(s)	7, 1034, 1192, 1258
BstMAI	GTCTC	5 cut(s)	36, 667, 693, 754, 1166
BstMBI	GATC	4 cut(s)	4, 1031, 1189, 1255
BstMCI	CGRYCG	1 cut(s)	269
BstMWI	GCNNNNNNNGC	7 cut(s)	238, 274, 871, 1012, 1123, 1514, 1523
BstNI	CCWGG	4 cut(s)	1143, 1199, 1413, 1528
BstSCI	CCNGG	7 cut(s)	490, 1070, 1071, 1141, 1197, 1411, 1526
BstSFI	CTRYAG	1 cut(s)	1167
BstUI	CGCG	1 cut(s)	208
BstV1I	GCAGC	5 cut(s)	250, 971, 1051, 1054, 1529
BstV2I	GAAGAC	2 cut(s)	369, 1275
BstX2I	RGATCY	2 cut(s)	1031, 1255
BstXI	CCANNNNNNTGG	1 cut(s)	797
BstYI	RGATCY	2 cut(s)	1031, 1255
BstZI	CGGCCG	1 cut(s)	266
Bsu36I	CCTNAGG	1 cut(s)	573
BsuI	GTATCC	1 cut(s)	1205
BsuRI	GGCC	4 cut(s)	268, 646, 697, 1408
BtgI	CCRYGG	3 cut(s)	11, 293, 1593
BtgZI	GCGATG	1 cut(s)	156
BtsCI	GGATG	4 cut(s)	615, 660, 1212, 1272
BtsI	GCAGTG	1 cut(s)	1429
BtsIMutI	CAGTG	2 cut(s)	1429, 1615
Cac8I	GCNNGC	6 cut(s)	279, 366, 699, 818, 822, 1124
CaiI	CAGNNNCTG	1 cut(s)	1166
CfoI	GCGC	1 cut(s)	364
Cfr13I	GGNCC	1 cut(s)	1075
Cfr9I	CCCGGG	1 cut(s)	1071
CseI	GACGC	3 cut(s)	18, 197, 238
Csp6I	GTAC	3 cut(s)	263, 283, 714
CviAII	CATG	6 cut(s)	294, 1151, 1217, 1382, 1544, 1594
CviQI	GTAC	3 cut(s)	263, 283, 714
DpnI	GATC	4 cut(s)	6, 1033, 1191, 1257
DpnII	GATC	4 cut(s)	4, 1031, 1189, 1255
DrdI	GACNNNNNNGTC	1 cut(s)	1180
DseDI	GACNNNNNNGTC	1 cut(s)	1180
EaeI	YGGCCR	1 cut(s)	266
EagI	CGGCCG	1 cut(s)	266
Eam1104I	CTCTTC	2 cut(s)	154, 376
EarI	CTCTTC	2 cut(s)	154, 376
EciI	GGCGGA	1 cut(s)	531
EclXI	CGGCCG	1 cut(s)	266
Eco130I	CCWWGG	5 cut(s)	293, 836, 856, 1078, 1593
Eco147I	AGGCCT	1 cut(s)	1408
Eco24I	GRGCYC	1 cut(s)	1601
Eco31I	GGTCTC	3 cut(s)	667, 754, 1166
Eco47I	GGWCC	1 cut(s)	1075
Eco52I	CGGCCG	1 cut(s)	266
Eco57I	CTGAAG	1 cut(s)	1311
Eco81I	CCTNAGG	1 cut(s)	573
Eco88I	CYCGRG	1 cut(s)	1071
EcoRII	CCWGG	4 cut(s)	1141, 1197, 1411, 1526
EcoT14I	CCWWGG	5 cut(s)	293, 836, 856, 1078, 1593
EcoT38I	GRGCYC	1 cut(s)	1601
ErhI	CCWWGG	5 cut(s)	293, 836, 856, 1078, 1593
Esp3I	CGTCTC	2 cut(s)	36, 693
FaeI	CATG	6 cut(s)	297, 1154, 1220, 1385, 1547, 1597
FaqI	GGGAC	2 cut(s)	105, 1561
FatI	CATG	6 cut(s)	293, 1150, 1216, 1381, 1543, 1593
Fnu4HI	GCNGC	8 cut(s)	239, 269, 866, 960, 1040, 1043, 1485, 1518
FokI	GGATG	4 cut(s)	622, 667, 1199, 1259
FriOI	GRGCYC	1 cut(s)	1601
Fsp4HI	GCNGC	8 cut(s)	239, 269, 866, 960, 1040, 1043, 1485, 1518
FspBI	CTAG	2 cut(s)	288, 1358
GlaI	GCGC	1 cut(s)	363
GluI	GCNGC	8 cut(s)	239, 269, 866, 960, 1040, 1043, 1485, 1518
GsaI	CCCAGC	2 cut(s)	158, 256
HaeII	RGCGCY	1 cut(s)	365
HaeIII	GGCC	4 cut(s)	268, 646, 697, 1408
HapII	CCGG	7 cut(s)	41, 212, 224, 431, 492, 1072, 1109
HgaI	GACGC	3 cut(s)	18, 197, 238
HhaI	GCGC	1 cut(s)	364
Hin1I	GRCGYC	1 cut(s)	29
Hin1II	CATG	6 cut(s)	297, 1154, 1220, 1385, 1547, 1597
Hin6I	GCGC	1 cut(s)	362
HinP1I	GCGC	1 cut(s)	362
HindIII	AAGCTT	1 cut(s)	814
HinfI	GANTC	7 cut(s)	65, 91, 118, 448, 658, 1304, 1531
HpaII	CCGG	7 cut(s)	41, 212, 224, 431, 492, 1072, 1109
HphI	GGTGA	4 cut(s)	159, 226, 759, 1046
Hpy188III	TCNNGA	5 cut(s)	288, 1010, 1259, 1358, 1435
Hpy99I	CGWCG	4 cut(s)	28, 64, 232, 340
HpyAV	CCTTC	7 cut(s)	114, 462, 474, 489, 774, 891, 1593
HpyCH4III	ACNGT	2 cut(s)	535, 1162
HpyCH4IV	ACGT	2 cut(s)	554, 953
HpyCH4V	TGCA	6 cut(s)	589, 803, 820, 916, 1169, 1559
HpyF10VI	GCNNNNNNNGC	7 cut(s)	238, 274, 871, 1012, 1123, 1514, 1523
HpySE526I	ACGT	2 cut(s)	554, 953
Hsp92I	GRCGYC	1 cut(s)	29
Hsp92II	CATG	6 cut(s)	297, 1154, 1220, 1385, 1547, 1597
HspAI	GCGC	1 cut(s)	362
Kzo9I	GATC	4 cut(s)	4, 1031, 1189, 1255
LmnI	GCTCC	2 cut(s)	163, 1383
Lsp1109I	GCAGC	5 cut(s)	250, 971, 1051, 1054, 1529
LweI	GCATC	3 cut(s)	576, 812, 1221
MaeI	CTAG	2 cut(s)	288, 1358
MaeII	ACGT	2 cut(s)	554, 953
MaeIII	GTNAC	3 cut(s)	214, 1099, 1501
MalI	GATC	4 cut(s)	6, 1033, 1191, 1257
MboI	GATC	4 cut(s)	4, 1031, 1189, 1255
MboII	GAAGA	6 cut(s)	141, 342, 363, 369, 1280, 1304
MfeI	CAATTG	1 cut(s)	1025
MflI	RGATCY	2 cut(s)	1031, 1255
MhlI	GDGCHC	1 cut(s)	1601
MluCI	AATT	5 cut(s)	441, 603, 901, 1025, 1250
MluI	ACGCGT	1 cut(s)	206
MlyI	GAGTC	4 cut(s)	127, 457, 652, 1313
MmeI	TCCRAC	2 cut(s)	42, 517
MseI	TTAA	1 cut(s)	83
MspI	CCGG	7 cut(s)	41, 212, 224, 431, 492, 1072, 1109
MspR9I	CCNGG	7 cut(s)	492, 1072, 1073, 1143, 1199, 1413, 1528
MunI	CAATTG	1 cut(s)	1025
MvaI	CCWGG	4 cut(s)	1143, 1199, 1413, 1528
MvnI	CGCG	1 cut(s)	208
MwoI	GCNNNNNNNGC	7 cut(s)	238, 274, 871, 1012, 1123, 1514, 1523
NciI	CCSGG	3 cut(s)	492, 1072, 1073
NcoI	CCATGG	2 cut(s)	293, 1593
NdeII	GATC	4 cut(s)	4, 1031, 1189, 1255
NlaIII	CATG	6 cut(s)	297, 1154, 1220, 1385, 1547, 1597
NlaIV	GGNNCC	3 cut(s)	634, 1076, 1257
NmeAIII	GCCGAG	2 cut(s)	672, 1143
NmuCI	GTSAC	2 cut(s)	214, 1501
NspV	TTCGAA	1 cut(s)	68
PceI	AGGCCT	1 cut(s)	1408
PcsI	WCGNNNNNNNCGW	1 cut(s)	74
PfeI	GAWTC	3 cut(s)	65, 91, 1531
PflFI	GACNNNGTC	1 cut(s)	28
PflMI	CCANNNNNTGG	1 cut(s)	1084
PkrI	GCNGC	8 cut(s)	240, 270, 867, 961, 1041, 1044, 1486, 1519
PleI	GAGTC	4 cut(s)	126, 456, 652, 1312
PpsI	GAGTC	4 cut(s)	126, 456, 652, 1312
Psp6I	CCWGG	4 cut(s)	1141, 1197, 1411, 1526
PspFI	CCCAGC	2 cut(s)	154, 252
PspGI	CCWGG	4 cut(s)	1141, 1197, 1411, 1526
PspN4I	GGNNCC	3 cut(s)	634, 1076, 1257
PspPI	GGNCC	1 cut(s)	1075
PstI	CTGCAG	1 cut(s)	1171
PstNI	CAGNNNCTG	1 cut(s)	1166
PsuI	RGATCY	2 cut(s)	1031, 1255
PsyI	GACNNNGTC	1 cut(s)	28
RsaI	GTAC	3 cut(s)	264, 284, 715
RsaNI	GTAC	3 cut(s)	263, 283, 714
SaqAI	TTAA	1 cut(s)	83
SatI	GCNGC	8 cut(s)	239, 269, 866, 960, 1040, 1043, 1485, 1518
Sau3AI	GATC	4 cut(s)	4, 1031, 1189, 1255
Sau96I	GGNCC	1 cut(s)	1075
SchI	GAGTC	4 cut(s)	127, 457, 652, 1313
ScrFI	CCNGG	7 cut(s)	492, 1072, 1073, 1143, 1199, 1413, 1528
SduI	GDGCHC	1 cut(s)	1601
SfaNI	GCATC	3 cut(s)	576, 812, 1221
SfcI	CTRYAG	1 cut(s)	1167
SfuI	TTCGAA	1 cut(s)	68
SinI	GGWCC	1 cut(s)	1075
SmaI	CCCGGG	1 cut(s)	1073
SmlI	CTYRAG	1 cut(s)	1008
SmoI	CTYRAG	1 cut(s)	1008
Sse9I	AATT	5 cut(s)	441, 603, 901, 1025, 1250
SseBI	AGGCCT	1 cut(s)	1408
SsiI	CCGC	8 cut(s)	269, 275, 330, 516, 866, 1037, 1484, 1566
SspI	AATATT	1 cut(s)	1402
SspMI	CTAG	2 cut(s)	288, 1358
StuI	AGGCCT	1 cut(s)	1408
StyD4I	CCNGG	7 cut(s)	490, 1070, 1071, 1141, 1197, 1411, 1526
StyI	CCWWGG	5 cut(s)	293, 836, 856, 1078, 1593
TaaI	ACNGT	2 cut(s)	535, 1162
TaiI	ACGT	2 cut(s)	557, 956
TaqI	TCGA	3 cut(s)	23, 68, 77
TaqII	GACCGA	2 cut(s)	1190, 1489
TasI	AATT	5 cut(s)	441, 603, 901, 1025, 1250
TauI	GCSGC	3 cut(s)	271, 868, 1487
TfiI	GAWTC	3 cut(s)	65, 91, 1531
Tru1I	TTAA	1 cut(s)	83
Tru9I	TTAA	1 cut(s)	83
TscAI	CASTG	1 cut(s)	1429
TseFI	GTSAC	2 cut(s)	214, 1501
TseI	GCWGC	5 cut(s)	238, 959, 1039, 1042, 1517
Tsp45I	GTSAC	2 cut(s)	214, 1501
TspGWI	ACGGA	1 cut(s)	118
TspMI	CCCGGG	1 cut(s)	1071
TspRI	CASTG	1 cut(s)	1429
Tth111I	GACNNNGTC	1 cut(s)	28
Van91I	CCANNNNNTGG	1 cut(s)	1084
VpaK11BI	GGWCC	1 cut(s)	1075
XapI	RAATTY	1 cut(s)	901
XbaI	TCTAGA	2 cut(s)	287, 1357
XmaI	CCCGGG	1 cut(s)	1071
XspI	CTAG	2 cut(s)	288, 1358

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.