Transcription initiation factor TFIID subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G10070 |
| fragaria_vesca | FvH4_6g18380 FvH4_6g18380 FvH4_6g18380 FvH4_6g18380 FvH4_6g18380 FvH4_6g18380 |
| malus_domestica | MD12G1023000.v1.1 MD14G1020000.v1.1 |
| prunus_persica | Prupe.7G113600_v2.0.a1 |
| pyrus_communis | pycom12g02150 pycom14g01960 |
| rosa_chinensis | RchiOBHm_Chr3g0472861 |
| rosa_laevigata | RLG00000024050 |
| rosa_multiflora | Rmu_sc0020146.1_g000004 |
| rosa_roxburghii | Rroxscaffold_6G00408550 |
| rosa_rugosa | Rorug03G0128200 Rorug03G0128300 Rorug03G0128400 Rorug03G0128500 Rorug03G0128600 Rorug03G0128700 Rorug03G0128800 |
| rosa_samantha | Rh3AG180900 Rh3BG207100 Rh3CG204300 Rh3DG168800 |
| rosa_wichuraiana | Rw3G016210 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 1101 |
| AccB1I | GGYRCC | 1 cut(s) | 163 |
| AccBSI | CCGCTC | 1 cut(s) | 509 |
| AccII | CGCG | 3 cut(s) | 476, 555, 1265 |
| AclWI | GGATC | 4 cut(s) | 808, 1364, 1382, 1395 |
| AcoI | YGGCCR | 2 cut(s) | 665, 1147 |
| AcsI | RAATTY | 4 cut(s) | 20, 760, 1326, 1404 |
| AcuI | CTGAAG | 3 cut(s) | 408, 987, 1053 |
| AcyI | GRCGYC | 1 cut(s) | 164 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 447, 448, 449, 452, 717, 1276 |
| AgsI | TTSAA | 3 cut(s) | 272, 707, 1400 |
| AjnI | CCWGG | 3 cut(s) | 347, 600, 826 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 622, 654, 908, 940 |
| AluBI | AGCT | 6 cut(s) | 974, 1007, 1073, 1250, 1354, 1467 |
| AluI | AGCT | 6 cut(s) | 974, 1007, 1073, 1250, 1354, 1467 |
| Alw26I | GTCTC | 2 cut(s) | 568, 601 |
| AlwI | GGATC | 4 cut(s) | 808, 1364, 1382, 1395 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1307, 1427 |
| Ama87I | CYCGRG | 1 cut(s) | 1136 |
| ApaI | GGGCCC | 2 cut(s) | 1220, 1282 |
| ApoI | RAATTY | 4 cut(s) | 20, 760, 1326, 1404 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1404 |
| AspLEI | GCGC | 3 cut(s) | 166, 478, 1102 |
| AsuHPI | GGTGA | 4 cut(s) | 108, 616, 804, 1035 |
| AvaI | CYCGRG | 1 cut(s) | 1136 |
| AvaII | GGWCC | 4 cut(s) | 58, 1133, 1171, 1267 |
| BaeGI | GKGCMC | 3 cut(s) | 774, 1220, 1282 |
| BalI | TGGCCA | 1 cut(s) | 1149 |
| BamHI | GGATCC | 1 cut(s) | 1387 |
| BanI | GGYRCC | 1 cut(s) | 163 |
| BanII | GRGCYC | 2 cut(s) | 1220, 1282 |
| BbsI | GAAGAC | 3 cut(s) | 513, 744, 1227 |
| BbvCI | CCTCAGC | 2 cut(s) | 147, 153 |
| BciT130I | CCWGG | 3 cut(s) | 349, 602, 828 |
| BciVI | GTATCC | 1 cut(s) | 592 |
| BcoDI | GTCTC | 2 cut(s) | 568, 601 |
| BfaI | CTAG | 3 cut(s) | 651, 1296, 1355 |
| BfmI | CTRYAG | 1 cut(s) | 969 |
| BfoI | RGCGCY | 1 cut(s) | 167 |
| BfuI | GTATCC | 1 cut(s) | 592 |
| Bme1390I | CCNGG | 3 cut(s) | 349, 602, 828 |
| Bme18I | GGWCC | 4 cut(s) | 58, 1133, 1171, 1267 |
| BmeT110I | CYCGRG | 1 cut(s) | 1136 |
| BmiI | GGNNCC | 9 cut(s) | 165, 1134, 1135, 1172, 1173, 1218, 1279, 1280, 1389 |
| BmrFI | CCNGG | 3 cut(s) | 349, 602, 828 |
| BmrI | ACTGGG | 3 cut(s) | 283, 681, 1437 |
| BmsI | GCATC | 4 cut(s) | 487, 541, 952, 1353 |
| BmuI | ACTGGG | 3 cut(s) | 283, 681, 1437 |
| BpiI | GAAGAC | 3 cut(s) | 513, 744, 1227 |
| BpmI | CTGGAG | 1 cut(s) | 810 |
| Bpu10I | CCTNAGC | 2 cut(s) | 147, 153 |
| BsaHI | GRCGYC | 1 cut(s) | 164 |
| BsaI | GGTCTC | 1 cut(s) | 601 |
| BsaJI | CCNNGG | 7 cut(s) | 347, 446, 553, 600, 766, 851, 1452 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 70, 100, 193, 223 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 447, 448, 449, 452, 717, 1276 |
| Bse118I | RCCGGY | 1 cut(s) | 160 |
| Bse1I | ACTGG | 5 cut(s) | 289, 591, 676, 701, 1432 |
| BseBI | CCWGG | 3 cut(s) | 349, 602, 828 |
| BseDI | CCNNGG | 7 cut(s) | 347, 446, 553, 600, 766, 851, 1452 |
| BseGI | GGATG | 9 cut(s) | 552, 636, 890, 923, 964, 1024, 1057, 1344, 1420 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 447, 448, 449, 452, 717, 1276 |
| BseMII | CTCAG | 4 cut(s) | 161, 167, 860, 1368 |
| BseNI | ACTGG | 5 cut(s) | 289, 591, 676, 701, 1432 |
| BseRI | GAGGAG | 4 cut(s) | 160, 399, 402, 486 |
| BseSI | GKGCMC | 3 cut(s) | 774, 1220, 1282 |
| BseYI | CCCAGC | 3 cut(s) | 135, 432, 978 |
| BsgI | GTGCAG | 1 cut(s) | 1236 |
| Bsh1236I | CGCG | 3 cut(s) | 476, 555, 1265 |
| BshNI | GGYRCC | 1 cut(s) | 163 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1136 |
| BsiSI | CCGG | 2 cut(s) | 161, 680 |
| BslFI | GGGAC | 4 cut(s) | 343, 730, 1119, 1157 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 447, 448, 449, 452, 717, 1276 |
| BsmAI | GTCTC | 2 cut(s) | 568, 601 |
| BsmFI | GGGAC | 4 cut(s) | 343, 730, 1119, 1157 |
| BsmI | GAATGC | 1 cut(s) | 8 |
| Bso31I | GGTCTC | 1 cut(s) | 601 |
| BsoBI | CYCGRG | 1 cut(s) | 1136 |
| Bsp120I | GGGCCC | 2 cut(s) | 1216, 1278 |
| Bsp1286I | GDGCHC | 3 cut(s) | 774, 1220, 1282 |
| Bsp143I | GATC | 3 cut(s) | 800, 1369, 1387 |
| Bsp19I | CCATGG | 2 cut(s) | 851, 1452 |
| BspCNI | CTCAG | 4 cut(s) | 160, 166, 859, 1369 |
| BspFNI | CGCG | 3 cut(s) | 476, 555, 1265 |
| BspLI | GGNNCC | 9 cut(s) | 165, 1134, 1135, 1172, 1173, 1218, 1279, 1280, 1389 |
| BspPI | GGATC | 4 cut(s) | 808, 1364, 1382, 1395 |
| BspT107I | GGYRCC | 1 cut(s) | 163 |
| BspTNI | GGTCTC | 1 cut(s) | 601 |
| BsrBI | CCGCTC | 1 cut(s) | 509 |
| BsrFI | RCCGGY | 1 cut(s) | 160 |
| BsrI | ACTGG | 5 cut(s) | 289, 591, 676, 701, 1432 |
| BssAI | RCCGGY | 1 cut(s) | 160 |
| BssECI | CCNNGG | 7 cut(s) | 347, 446, 553, 600, 766, 851, 1452 |
| BssMI | GATC | 3 cut(s) | 800, 1369, 1387 |
| BssNI | GRCGYC | 1 cut(s) | 164 |
| BssT1I | CCWWGG | 3 cut(s) | 766, 851, 1452 |
| Bst2UI | CCWGG | 3 cut(s) | 349, 602, 828 |
| Bst4CI | ACNGT | 1 cut(s) | 612 |
| BstACI | GRCGYC | 1 cut(s) | 164 |
| BstC8I | GCNNGC | 1 cut(s) | 6 |
| BstDEI | CTNAG | 4 cut(s) | 147, 153, 846, 1377 |
| BstDSI | CCRYGG | 3 cut(s) | 553, 851, 1452 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 715 |
| BstF5I | GGATG | 9 cut(s) | 552, 636, 890, 923, 964, 1024, 1057, 1344, 1420 |
| BstFNI | CGCG | 3 cut(s) | 476, 555, 1265 |
| BstH2I | RGCGCY | 1 cut(s) | 167 |
| BstHHI | GCGC | 3 cut(s) | 166, 478, 1102 |
| BstKTI | GATC | 3 cut(s) | 803, 1372, 1390 |
| BstMAI | GTCTC | 2 cut(s) | 568, 601 |
| BstMBI | GATC | 3 cut(s) | 800, 1369, 1387 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 163, 442, 886, 928, 940, 949, 958, 1192, 1341 |
| BstNI | CCWGG | 3 cut(s) | 349, 602, 828 |
| BstSCI | CCNGG | 3 cut(s) | 347, 600, 826 |
| BstSFI | CTRYAG | 1 cut(s) | 969 |
| BstSLI | GKGCMC | 3 cut(s) | 774, 1220, 1282 |
| BstUI | CGCG | 3 cut(s) | 476, 555, 1265 |
| BstV2I | GAAGAC | 3 cut(s) | 513, 744, 1227 |
| BstX2I | RGATCY | 2 cut(s) | 800, 1387 |
| BstYI | RGATCY | 2 cut(s) | 800, 1387 |
| BsuI | GTATCC | 1 cut(s) | 592 |
| BtgI | CCRYGG | 3 cut(s) | 553, 851, 1452 |
| BtsCI | GGATG | 9 cut(s) | 552, 636, 890, 923, 964, 1024, 1057, 1344, 1420 |
| BtsI | GCAGTG | 1 cut(s) | 1028 |
| BtsIMutI | CAGTG | 2 cut(s) | 801, 1028 |
| Cac8I | GCNNGC | 1 cut(s) | 6 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1307, 1427 |
| CfoI | GCGC | 3 cut(s) | 166, 478, 1102 |
| Cfr10I | RCCGGY | 1 cut(s) | 160 |
| Cfr42I | CCGCGG | 1 cut(s) | 556 |
| CviAII | CATG | 8 cut(s) | 55, 852, 928, 997, 1063, 1183, 1411, 1453 |
| DdeI | CTNAG | 4 cut(s) | 147, 153, 846, 1377 |
| DinI | GGCGCC | 1 cut(s) | 165 |
| DpnI | GATC | 3 cut(s) | 802, 1371, 1389 |
| DpnII | GATC | 3 cut(s) | 800, 1369, 1387 |
| EaeI | YGGCCR | 2 cut(s) | 665, 1147 |
| EciI | GGCGGA | 1 cut(s) | 405 |
| Eco130I | CCWWGG | 3 cut(s) | 766, 851, 1452 |
| Eco24I | GRGCYC | 2 cut(s) | 1220, 1282 |
| Eco31I | GGTCTC | 1 cut(s) | 601 |
| Eco47I | GGWCC | 4 cut(s) | 58, 1133, 1171, 1267 |
| Eco57I | CTGAAG | 3 cut(s) | 408, 987, 1053 |
| Eco88I | CYCGRG | 1 cut(s) | 1136 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 715 |
| EcoO109I | RGGNCCY | 5 cut(s) | 1133, 1171, 1216, 1217, 1278 |
| EcoRI | GAATTC | 1 cut(s) | 1326 |
| EcoRII | CCWGG | 3 cut(s) | 347, 600, 826 |
| EcoT14I | CCWWGG | 3 cut(s) | 766, 851, 1452 |
| EcoT38I | GRGCYC | 2 cut(s) | 1220, 1282 |
| EgeI | GGCGCC | 1 cut(s) | 165 |
| EheI | GGCGCC | 1 cut(s) | 165 |
| ErhI | CCWWGG | 3 cut(s) | 766, 851, 1452 |
| FaeI | CATG | 8 cut(s) | 58, 855, 931, 1000, 1066, 1186, 1414, 1456 |
| FaqI | GGGAC | 4 cut(s) | 343, 730, 1119, 1157 |
| FatI | CATG | 8 cut(s) | 54, 851, 927, 996, 1062, 1182, 1410, 1452 |
| FauI | CCCGC | 3 cut(s) | 450, 481, 514 |
| FokI | GGATG | 9 cut(s) | 559, 643, 877, 910, 951, 1011, 1044, 1331, 1427 |
| FriOI | GRGCYC | 2 cut(s) | 1220, 1282 |
| FspBI | CTAG | 3 cut(s) | 651, 1296, 1355 |
| FspI | TGCGCA | 1 cut(s) | 1101 |
| GlaI | GCGC | 3 cut(s) | 165, 477, 1101 |
| GsaI | CCCAGC | 3 cut(s) | 139, 436, 982 |
| GsuI | CTGGAG | 1 cut(s) | 810 |
| HaeII | RGCGCY | 1 cut(s) | 167 |
| HapII | CCGG | 2 cut(s) | 161, 680 |
| HhaI | GCGC | 3 cut(s) | 166, 478, 1102 |
| Hin1I | GRCGYC | 1 cut(s) | 164 |
| Hin1II | CATG | 8 cut(s) | 58, 855, 931, 1000, 1066, 1186, 1414, 1456 |
| Hin6I | GCGC | 3 cut(s) | 164, 476, 1100 |
| HinP1I | GCGC | 3 cut(s) | 164, 476, 1100 |
| HincII | GTYRAC | 1 cut(s) | 1360 |
| HindII | GTYRAC | 1 cut(s) | 1360 |
| HinfI | GANTC | 5 cut(s) | 113, 575, 676, 736, 1313 |
| HpaII | CCGG | 2 cut(s) | 161, 680 |
| HphI | GGTGA | 4 cut(s) | 108, 616, 804, 1035 |
| Hpy166II | GTNNAC | 2 cut(s) | 641, 1360 |
| Hpy188I | TCNGA | 1 cut(s) | 1378 |
| Hpy188III | TCNNGA | 3 cut(s) | 1136, 1301, 1391 |
| Hpy8I | GTNNAC | 2 cut(s) | 641, 1360 |
| HpyCH4III | ACNGT | 1 cut(s) | 612 |
| HpyCH4V | TGCA | 5 cut(s) | 619, 835, 931, 1253, 1421 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 163, 442, 886, 928, 940, 949, 958, 1192, 1341 |
| HpyF3I | CTNAG | 4 cut(s) | 147, 153, 846, 1377 |
| Hsp92I | GRCGYC | 1 cut(s) | 164 |
| Hsp92II | CATG | 8 cut(s) | 58, 855, 931, 1000, 1066, 1186, 1414, 1456 |
| HspAI | GCGC | 3 cut(s) | 164, 476, 1100 |
| KasI | GGCGCC | 1 cut(s) | 163 |
| KflI | GGGWCCC | 2 cut(s) | 1133, 1171 |
| KspI | CCGCGG | 1 cut(s) | 556 |
| Kzo9I | GATC | 3 cut(s) | 800, 1369, 1387 |
| LmnI | GCTCC | 2 cut(s) | 514, 979 |
| LweI | GCATC | 4 cut(s) | 487, 541, 952, 1353 |
| MaeI | CTAG | 3 cut(s) | 651, 1296, 1355 |
| MaeIII | GTNAC | 1 cut(s) | 867 |
| MalI | GATC | 3 cut(s) | 802, 1371, 1389 |
| MbiI | CCGCTC | 1 cut(s) | 509 |
| MboI | GATC | 3 cut(s) | 800, 1369, 1387 |
| MboII | GAAGA | 8 cut(s) | 378, 381, 513, 744, 938, 1227, 1412, 1462 |
| MflI | RGATCY | 2 cut(s) | 800, 1387 |
| MhlI | GDGCHC | 3 cut(s) | 774, 1220, 1282 |
| MlsI | TGGCCA | 1 cut(s) | 1149 |
| MluCI | AATT | 5 cut(s) | 20, 586, 760, 1326, 1404 |
| MluNI | TGGCCA | 1 cut(s) | 1149 |
| Mly113I | GGCGCC | 1 cut(s) | 164 |
| MlyI | GAGTC | 1 cut(s) | 745 |
| MmeI | TCCRAC | 2 cut(s) | 212, 1365 |
| Mox20I | TGGCCA | 1 cut(s) | 1149 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1404 |
| MscI | TGGCCA | 1 cut(s) | 1149 |
| MslI | CAYNNNNRTG | 1 cut(s) | 540 |
| Msp20I | TGGCCA | 1 cut(s) | 1149 |
| MspA1I | CMGCKG | 2 cut(s) | 486, 555 |
| MspI | CCGG | 2 cut(s) | 161, 680 |
| MspR9I | CCNGG | 3 cut(s) | 349, 602, 828 |
| Mva1269I | GAATGC | 1 cut(s) | 8 |
| MvaI | CCWGG | 3 cut(s) | 349, 602, 828 |
| MvnI | CGCG | 3 cut(s) | 476, 555, 1265 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 163, 442, 886, 928, 940, 949, 958, 1192, 1341 |
| NarI | GGCGCC | 1 cut(s) | 164 |
| NcoI | CCATGG | 2 cut(s) | 851, 1452 |
| NdeII | GATC | 3 cut(s) | 800, 1369, 1387 |
| NlaIII | CATG | 8 cut(s) | 58, 855, 931, 1000, 1066, 1186, 1414, 1456 |
| NlaIV | GGNNCC | 9 cut(s) | 165, 1134, 1135, 1172, 1173, 1218, 1279, 1280, 1389 |
| NmeAIII | GCCGAG | 1 cut(s) | 471 |
| NmuCI | GTSAC | 1 cut(s) | 867 |
| NsbI | TGCGCA | 1 cut(s) | 1101 |
| PctI | GAATGC | 1 cut(s) | 8 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1404 |
| PfeI | GAWTC | 4 cut(s) | 113, 575, 676, 1313 |
| PleI | GAGTC | 1 cut(s) | 744 |
| PluTI | GGCGCC | 1 cut(s) | 167 |
| PpsI | GAGTC | 1 cut(s) | 744 |
| PpuMI | RGGWCCY | 2 cut(s) | 1133, 1171 |
| Psp5II | RGGWCCY | 2 cut(s) | 1133, 1171 |
| Psp6I | CCWGG | 3 cut(s) | 347, 600, 826 |
| PspFI | CCCAGC | 3 cut(s) | 135, 432, 978 |
| PspGI | CCWGG | 3 cut(s) | 347, 600, 826 |
| PspN4I | GGNNCC | 9 cut(s) | 165, 1134, 1135, 1172, 1173, 1218, 1279, 1280, 1389 |
| PspOMI | GGGCCC | 2 cut(s) | 1216, 1278 |
| PspPPI | RGGWCCY | 2 cut(s) | 1133, 1171 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1307, 1427 |
| PsuI | RGATCY | 2 cut(s) | 800, 1387 |
| RseI | CAYNNNNRTG | 1 cut(s) | 540 |
| SacII | CCGCGG | 1 cut(s) | 556 |
| Sau3AI | GATC | 3 cut(s) | 800, 1369, 1387 |
| SchI | GAGTC | 1 cut(s) | 745 |
| ScrFI | CCNGG | 3 cut(s) | 349, 602, 828 |
| SduI | GDGCHC | 3 cut(s) | 774, 1220, 1282 |
| SfaNI | GCATC | 4 cut(s) | 487, 541, 952, 1353 |
| SfcI | CTRYAG | 1 cut(s) | 969 |
| SfoI | GGCGCC | 1 cut(s) | 165 |
| Sfr303I | CCGCGG | 1 cut(s) | 556 |
| SgrAI | CRCCGGYG | 1 cut(s) | 160 |
| SgrBI | CCGCGG | 1 cut(s) | 556 |
| SinI | GGWCC | 4 cut(s) | 58, 1133, 1171, 1267 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 540 |
| Sse9I | AATT | 5 cut(s) | 20, 586, 760, 1326, 1404 |
| SspDI | GGCGCC | 1 cut(s) | 163 |
| SspMI | CTAG | 3 cut(s) | 651, 1296, 1355 |
| StyD4I | CCNGG | 3 cut(s) | 347, 600, 826 |
| StyI | CCWWGG | 3 cut(s) | 766, 851, 1452 |
| TaaI | ACNGT | 1 cut(s) | 612 |
| TasI | AATT | 5 cut(s) | 20, 586, 760, 1326, 1404 |
| TauI | GCSGC | 8 cut(s) | 421, 456, 489, 555, 558, 667, 724, 883 |
| TfiI | GAWTC | 4 cut(s) | 113, 575, 676, 1313 |
| TscAI | CASTG | 2 cut(s) | 801, 1035 |
| TseFI | GTSAC | 1 cut(s) | 867 |
| Tsp45I | GTSAC | 1 cut(s) | 867 |
| TspDTI | ATGAA | 6 cut(s) | 780, 798, 888, 929, 1326, 1462 |
| TspGWI | ACGGA | 2 cut(s) | 501, 1337 |
| TspRI | CASTG | 2 cut(s) | 801, 1035 |
| VpaK11BI | GGWCC | 4 cut(s) | 58, 1133, 1171, 1267 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 715 |
| XapI | RAATTY | 4 cut(s) | 20, 760, 1326, 1404 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1404 |
| XspI | CTAG | 3 cut(s) | 651, 1296, 1355 |