Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0005887

Physical Location & Seq

Genomic Coordinates Reverse (-)

12129739 .. 12135164

Gene Structure 5426 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g18380.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1617 bp

ATGGACCCACAAAACTCCACCACCACCACTACCACACCTCCAATCCCCTCCACCTCTGAACCGCCCCAACCCCAATCGCAGCCTCCGCCGCAGCCGCCGCCGTCATCCGCCTCAGCCCCTTCAACCCCCACCCCAATCCCTCCGTCCCCAAACCCTAACCCTAAACCCTCAACCCCATCATTACCGCCCCCTCAGTCCCTCCCAGCCCCCGCTCAGACTCGGCCTCCGCCCGCATTGAATCGCTCATGGCCGCCGCCCCCTCACTACTCCCACCACTTGCCCTCCCCTTCTCCTTCCGCTTCCTCCGTGCCTCCGGCGCCGTCGGTCTCCGGGCCTCCTCCGAGGGGCGGCATTGCCATCGGTGTCCCGGCACACCACCCTAGCCCCCCTTCCCCTCAACCCACTCCCTATCCCTCATCTTACGGCCACTTCGGCGGCCTCGGCCGCGGCGCCGGAGTTAGCCTGCCTGAACCCTCCGCCAATTCCAATGCTTCTCAGGTGAGGCCGCCGATGCCAGGAATGCAGGGAATGGGGATGTTGGGCTCGCTTGGTTCGAGTTCTCAAATGCGCCCGGCCGGGATTTCTCCACACCATCCACAGAGACCAGTTCAATCCCCTCTTAGGCCAGCGTCTACCGCAAGTAATCAGTCCCCTTCTTCCCAAAATTTTCAAGGGCATAACCTTTCAAGAGCCTCATCATTGGGATCTCCTAGTTCCCCAAACACATCTCAAGGTTTGGCGCTTCATAGTCAGCCATGGTTATCTGGGTCACAAGGGAAGCCTCCTATACCCTCCTCTCCATATAGGCAGCAGATTGCACCGACATCGATGCTGCAAAGATCACATCTTCCGCAGCAACAGCAACAGCAGCAACACCTTCCCCTTCCTACAACTCCACCGCAACAGCAGCAAGGACCCATCACAACAGCTTCACCACAACAGCATATGCCATCTGTGCAGCATCAACAACCTTCCTCCTCACATCAAGGACATGATCATTTTGGGCAACAAGCTCCACCCCCAAGGATCACACAAGCTTCACCTCGTCAGCAACAAAATACAAGGGTACAGGTCCCAGTAAACCAGAAGTCTTTCCCTCTTGCAGCAGCACAGCCTAACTCAGTCCAATCAACACAGCAGAATAGAATCACTAGTGCAGAAACTGAGGAACCTGGTAACAGAATTCTTAGTAAAAGAACCATTCATGAGCTAGTCAACCAGATTGATCCATCTGAGAGATTGGATCCAGATGTTGAAGACATTCTCATGGACATTGCAGATGAATTTGTAGAATCCATTACAACATTTAGTTGCTCACTAGCCAAGCATCGGAAATCAACTACATTGGAAGCAAAAGACATACTCCTACATCTTGAAAAAAATTGGAATATAACTCTTCCTGGGTTTGGTGGTGATGAAATTAAGGGCTACAGAAAACCGATTACAAATGATATTCACAAGGGGCGTCTTGCTGCTATAAAGAAGTCCATGGTAGCTACTGAGACAGCAAATACTAGGAATTCTGCAGGACAAGCTACTGGAAATGCGAAGGGTGGTCTGGTAAAGGTGCCAGTCAATATAAGCTCCCAAAATGTCAAAATGCGTGAAGTTACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000123 GO:0000124 GO:0000428 GO:0001085 GO:0001102 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0005669 GO:0006139 GO:0006325 GO:0006351 GO:0006352 GO:0006366 GO:0006367 GO:0006464 GO:0006473 GO:0006475 GO:0006725 GO:0006807 GO:0006996 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016569 GO:0016570 GO:0016573 GO:0016591 GO:0017025 GO:0018130 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019438 GO:0019538 GO:0022607 GO:0030880 GO:0031248 GO:0031974 GO:0031981 GO:0032774 GO:0032991 GO:0033613 GO:0034622 GO:0034641 GO:0034645 GO:0034654 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0043933 GO:0043966 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044798 GO:0046483 GO:0051123 GO:0051276 GO:0055029 GO:0061695 GO:0065003 GO:0065004 GO:0070013 GO:0070461 GO:0070897 GO:0071704 GO:0071824 GO:0071840 GO:0090304 GO:0090575 GO:0097159 GO:0097659 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901576 GO:1902493 GO:1902494 GO:1905368 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko03022 map03022

Pfam Domains

Protein Families

TFIID_20kDa

Protein Analysis

539

Amino Acids

57.08

Weight (kDa)

10.03

Isoelectric Point (pI)

80.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TFIID_20kDa	PF03847	400 - 467	6.5e-32	Transcription initiation factor TFIID subunit A

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0005887)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10070
fragaria_vesca	FvH4_6g18380 FvH4_6g18380 FvH4_6g18380 FvH4_6g18380 FvH4_6g18380 FvH4_6g18380
malus_domestica	MD12G1023000.v1.1 MD14G1020000.v1.1
prunus_persica	Prupe.7G113600_v2.0.a1
pyrus_communis	pycom12g02150 pycom14g01960
rosa_chinensis	RchiOBHm_Chr3g0472861
rosa_laevigata	RLG00000024050
rosa_multiflora	Rmu_sc0020146.1_g000004
rosa_roxburghii	Rroxscaffold_6G00408550
rosa_rugosa	Rorug03G0128200 Rorug03G0128300 Rorug03G0128400 Rorug03G0128500 Rorug03G0128600 Rorug03G0128700 Rorug03G0128800
rosa_samantha	Rh3AG180900 Rh3BG207100 Rh3CG204300 Rh3DG168800
rosa_wichuraiana	Rw3G016210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	316, 449, 1567
AccBSI	CCGCTC	1 cut(s)	212
AccI	GTMKAC	1 cut(s)	632
AccII	CGCG	1 cut(s)	447
AclWI	GGATC	5 cut(s)	712, 1034, 1220, 1238, 1251
AcoI	YGGCCR	4 cut(s)	248, 424, 442, 573
AcsI	RAATTY	4 cut(s)	664, 1182, 1283, 1519
AcyI	GRCGYC	3 cut(s)	317, 450, 1465
AfaI	GTAC	1 cut(s)	1068
AfiI	CCNNNNNNNGG	6 cut(s)	344, 347, 515, 621, 1329, 1406
AgsI	TTSAA	7 cut(s)	123, 238, 611, 671, 687, 1256, 1376
AhlI	ACTAGT	1 cut(s)	1151
AjnI	CCWGG	3 cut(s)	514, 1171, 1399
AluBI	AGCT	7 cut(s)	929, 1013, 1037, 1210, 1496, 1535, 1584
AluI	AGCT	7 cut(s)	929, 1013, 1037, 1210, 1496, 1535, 1584
Alw26I	GTCTC	3 cut(s)	331, 595, 1496
AlwI	GGATC	5 cut(s)	712, 1034, 1220, 1238, 1251
AlwNI	CAGNNNCTG	1 cut(s)	1163
AoxI	GGCC	9 cut(s)	221, 248, 332, 424, 436, 442, 503, 573, 623
ApoI	RAATTY	4 cut(s)	664, 1182, 1283, 1519
Asp700I	GAANNNNTTC	2 cut(s)	1091, 1260
AspLEI	GCGC	4 cut(s)	319, 452, 570, 742
AspS9I	GGNCC	4 cut(s)	4, 332, 914, 1072
AsuC2I	CCSGG	4 cut(s)	331, 368, 572, 577
AsuHPI	GGTGA	4 cut(s)	511, 924, 1032, 1424
AvaII	GGWCC	3 cut(s)	4, 914, 1072
BamHI	GGATCC	1 cut(s)	1243
BanI	GGYRCC	3 cut(s)	316, 449, 1567
BanII	GRGCYC	1 cut(s)	545
BbsI	GAAGAC	1 cut(s)	1263
BbvCI	CCTCAGC	1 cut(s)	112
BccI	CCATC	6 cut(s)	184, 365, 600, 926, 958, 1237
BceAI	ACGGC	3 cut(s)	85, 304, 439
BcgI	CGANNNNNNTGC	6 cut(s)	340, 374, 807, 811, 841, 845
BciT130I	CCWGG	3 cut(s)	516, 1173, 1401
BclI	TGATCA	1 cut(s)	994
BcnI	CCSGG	4 cut(s)	331, 368, 572, 577
BcoDI	GTCTC	3 cut(s)	331, 595, 1496
BcuI	ACTAGT	1 cut(s)	1151
BfaI	CTAG	6 cut(s)	381, 711, 1152, 1211, 1319, 1515
BfmI	CTRYAG	2 cut(s)	1429, 1524
BfoI	RGCGCY	3 cut(s)	320, 453, 743
BglI	GCCNNNNNGGC	1 cut(s)	432
Bme1390I	CCNGG	7 cut(s)	331, 368, 516, 572, 577, 1173, 1401
Bme18I	GGWCC	3 cut(s)	4, 914, 1072
BmgT120I	GGNCC	4 cut(s)	4, 332, 914, 1072
BmiI	GGNNCC	8 cut(s)	6, 318, 451, 916, 1074, 1170, 1245, 1569
BmrFI	CCNGG	7 cut(s)	331, 368, 516, 572, 577, 1173, 1401
BmrI	ACTGGG	1 cut(s)	1070
BmsI	GCATC	4 cut(s)	501, 819, 970, 1336
BmuI	ACTGGG	1 cut(s)	1070
BpiI	GAAGAC	1 cut(s)	1263
Bpu10I	CCTNAGC	1 cut(s)	112
BpuEI	CTTGAG	1 cut(s)	714
BpuMI	CCSGG	4 cut(s)	331, 368, 572, 577
Bsa29I	ATCGAT	1 cut(s)	827
BsaHI	GRCGYC	3 cut(s)	317, 450, 1465
BsaI	GGTCTC	2 cut(s)	331, 595
BsaJI	CCNNGG	7 cut(s)	341, 439, 445, 755, 1022, 1400, 1488
BsaXI	ACNNNNNCTCC	6 cut(s)	22, 52, 208, 238, 266, 296
Bsc4I	CCNNNNNNNGG	6 cut(s)	344, 347, 515, 621, 1329, 1406
Bse1I	ACTGG	4 cut(s)	605, 1076, 1543, 1571
Bse3DI	GCAATG	2 cut(s)	351, 1272
BseBI	CCWGG	3 cut(s)	516, 1173, 1401
BseCI	ATCGAT	1 cut(s)	827
BseDI	CCNNGG	7 cut(s)	341, 439, 445, 755, 1022, 1400, 1488
BseGI	GGATG	3 cut(s)	104, 540, 592
BseLI	CCNNNNNNNGG	6 cut(s)	344, 347, 515, 621, 1329, 1406
BseMI	GCAATG	2 cut(s)	351, 1272
BseMII	CTCAG	8 cut(s)	126, 206, 227, 509, 1134, 1155, 1224, 1491
BseNI	ACTGG	4 cut(s)	605, 1076, 1543, 1571
BseRI	GAGGAG	3 cut(s)	327, 784, 967
BseX3I	CGGCCG	2 cut(s)	442, 573
BseYI	CCCAGC	1 cut(s)	202
BsgI	GTGCAG	2 cut(s)	977, 1176
Bsh1236I	CGCG	1 cut(s)	447
Bsh1285I	CGRYCG	2 cut(s)	445, 576
BshFI	GGCC	9 cut(s)	223, 250, 334, 426, 438, 444, 505, 575, 625
BshNI	GGYRCC	3 cut(s)	316, 449, 1567
BshVI	ATCGAT	1 cut(s)	827
BsiEI	CGRYCG	2 cut(s)	445, 576
BsiSI	CCGG	6 cut(s)	314, 330, 368, 453, 572, 576
BslFI	GGGAC	5 cut(s)	130, 181, 350, 634, 1058
BslI	CCNNNNNNNGG	6 cut(s)	344, 347, 515, 621, 1329, 1406
BsmAI	GTCTC	3 cut(s)	331, 595, 1496
BsmFI	GGGAC	5 cut(s)	130, 181, 350, 634, 1058
BsmI	GAATGC	1 cut(s)	525
BsnI	GGCC	9 cut(s)	223, 250, 334, 426, 438, 444, 505, 575, 625
Bso31I	GGTCTC	2 cut(s)	331, 595
Bsp1286I	GDGCHC	1 cut(s)	545
Bsp143I	GATC	6 cut(s)	704, 839, 994, 1026, 1225, 1243
Bsp19I	CCATGG	2 cut(s)	755, 1488
BspANI	GGCC	9 cut(s)	223, 250, 334, 426, 438, 444, 505, 575, 625
BspCNI	CTCAG	8 cut(s)	125, 205, 226, 508, 1133, 1156, 1225, 1492
BspDI	ATCGAT	1 cut(s)	827
BspFNI	CGCG	1 cut(s)	447
BspHI	TCATGA	1 cut(s)	1204
BspLI	GGNNCC	8 cut(s)	6, 318, 451, 916, 1074, 1170, 1245, 1569
BspMAI	CTGCAG	1 cut(s)	1528
BspPI	GGATC	5 cut(s)	712, 1034, 1220, 1238, 1251
BspT107I	GGYRCC	3 cut(s)	316, 449, 1567
BspTNI	GGTCTC	2 cut(s)	331, 595
BsrBI	CCGCTC	1 cut(s)	212
BsrDI	GCAATG	2 cut(s)	351, 1272
BsrI	ACTGG	4 cut(s)	605, 1076, 1543, 1571
BssECI	CCNNGG	7 cut(s)	341, 439, 445, 755, 1022, 1400, 1488
BssMI	GATC	6 cut(s)	704, 839, 994, 1026, 1225, 1243
BssNI	GRCGYC	3 cut(s)	317, 450, 1465
BssT1I	CCWWGG	3 cut(s)	755, 1022, 1488
Bst2UI	CCWGG	3 cut(s)	516, 1173, 1401
Bst6I	CTCTTC	1 cut(s)	1401
BstACI	GRCGYC	3 cut(s)	317, 450, 1465
BstC8I	GCNNGC	4 cut(s)	231, 464, 545, 627
BstDSI	CCRYGG	3 cut(s)	445, 755, 1488
BstF5I	GGATG	3 cut(s)	104, 540, 592
BstFNI	CGCG	1 cut(s)	447
BstH2I	RGCGCY	3 cut(s)	320, 453, 743
BstHHI	GCGC	4 cut(s)	319, 452, 570, 742
BstKTI	GATC	6 cut(s)	707, 842, 997, 1029, 1228, 1246
BstMAI	GTCTC	3 cut(s)	331, 595, 1496
BstMBI	GATC	6 cut(s)	704, 839, 994, 1026, 1225, 1243
BstMCI	CGRYCG	2 cut(s)	445, 576
BstNI	CCWGG	3 cut(s)	516, 1173, 1401
BstSCI	CCNGG	7 cut(s)	329, 366, 514, 570, 575, 1171, 1399
BstSFI	CTRYAG	2 cut(s)	1429, 1524
BstUI	CGCG	1 cut(s)	447
BstV2I	GAAGAC	1 cut(s)	1263
BstX2I	RGATCY	2 cut(s)	704, 1243
BstYI	RGATCY	2 cut(s)	704, 1243
BstZI	CGGCCG	2 cut(s)	442, 573
Bsu15I	ATCGAT	1 cut(s)	827
BsuRI	GGCC	9 cut(s)	223, 250, 334, 426, 438, 444, 505, 575, 625
BsuTUI	ATCGAT	1 cut(s)	827
BtgI	CCRYGG	3 cut(s)	445, 755, 1488
BtsCI	GGATG	3 cut(s)	104, 540, 592
Cac8I	GCNNGC	4 cut(s)	231, 464, 545, 627
CaiI	CAGNNNCTG	1 cut(s)	1163
CciI	TCATGA	1 cut(s)	1204
CfoI	GCGC	4 cut(s)	319, 452, 570, 742
Cfr13I	GGNCC	4 cut(s)	4, 332, 914, 1072
Cfr42I	CCGCGG	1 cut(s)	448
ClaI	ATCGAT	1 cut(s)	827
CseI	GACGC	2 cut(s)	618, 1454
CsiI	ACCWGGT	1 cut(s)	1171
Csp6I	GTAC	1 cut(s)	1067
CviAII	CATG	6 cut(s)	246, 756, 992, 1205, 1267, 1489
CviQI	GTAC	1 cut(s)	1067
DinI	GGCGCC	2 cut(s)	318, 451
DpnI	GATC	6 cut(s)	706, 841, 996, 1028, 1227, 1245
DpnII	GATC	6 cut(s)	704, 839, 994, 1026, 1225, 1243
EaeI	YGGCCR	4 cut(s)	248, 424, 442, 573
EagI	CGGCCG	2 cut(s)	442, 573
Eam1104I	CTCTTC	1 cut(s)	1401
EarI	CTCTTC	1 cut(s)	1401
EciI	GGCGGA	4 cut(s)	75, 97, 216, 466
EclXI	CGGCCG	2 cut(s)	442, 573
Eco130I	CCWWGG	3 cut(s)	755, 1022, 1488
Eco24I	GRGCYC	1 cut(s)	545
Eco31I	GGTCTC	2 cut(s)	331, 595
Eco47I	GGWCC	3 cut(s)	4, 914, 1072
Eco52I	CGGCCG	2 cut(s)	442, 573
EcoO109I	RGGNCCY	2 cut(s)	914, 1072
EcoRI	GAATTC	2 cut(s)	1182, 1519
EcoRII	CCWGG	3 cut(s)	514, 1171, 1399
EcoT14I	CCWWGG	3 cut(s)	755, 1022, 1488
EcoT38I	GRGCYC	1 cut(s)	545
EgeI	GGCGCC	2 cut(s)	318, 451
EheI	GGCGCC	2 cut(s)	318, 451
ErhI	CCWWGG	3 cut(s)	755, 1022, 1488
FaeI	CATG	6 cut(s)	249, 759, 995, 1208, 1270, 1492
FaqI	GGGAC	5 cut(s)	130, 181, 350, 634, 1058
FatI	CATG	6 cut(s)	245, 755, 991, 1204, 1266, 1488
FauI	CCCGC	2 cut(s)	217, 238
FauNDI	CATATG	1 cut(s)	945
FbaI	TGATCA	1 cut(s)	994
FblI	GTMKAC	1 cut(s)	632
FokI	GGATG	3 cut(s)	91, 547, 579
FriOI	GRGCYC	1 cut(s)	545
FspBI	CTAG	6 cut(s)	381, 711, 1152, 1211, 1319, 1515
GlaI	GCGC	4 cut(s)	318, 451, 569, 741
GsaI	CCCAGC	1 cut(s)	206
HaeII	RGCGCY	3 cut(s)	320, 453, 743
HaeIII	GGCC	9 cut(s)	223, 250, 334, 426, 438, 444, 505, 575, 625
HapII	CCGG	6 cut(s)	314, 330, 368, 453, 572, 576
HgaI	GACGC	2 cut(s)	618, 1454
HhaI	GCGC	4 cut(s)	319, 452, 570, 742
Hin1I	GRCGYC	3 cut(s)	317, 450, 1465
Hin1II	CATG	6 cut(s)	249, 759, 995, 1208, 1270, 1492
Hin6I	GCGC	4 cut(s)	317, 450, 568, 740
HinP1I	GCGC	4 cut(s)	317, 450, 568, 740
HincII	GTYRAC	1 cut(s)	1216
HindII	GTYRAC	1 cut(s)	1216
HindIII	AAGCTT	1 cut(s)	1035
HinfI	GANTC	4 cut(s)	217, 238, 1146, 1292
HpaII	CCGG	6 cut(s)	314, 330, 368, 453, 572, 576
HphI	GGTGA	4 cut(s)	511, 924, 1032, 1424
Hpy166II	GTNNAC	3 cut(s)	633, 1081, 1216
Hpy188I	TCNGA	5 cut(s)	58, 216, 342, 1234, 1332
Hpy188III	TCNNGA	4 cut(s)	687, 1205, 1247, 1373
Hpy8I	GTNNAC	3 cut(s)	633, 1081, 1216
Hpy99I	CGWCG	1 cut(s)	325
HpyAV	CCTTC	9 cut(s)	129, 297, 303, 399, 663, 887, 893, 981, 1543
HpyCH4V	TGCA	8 cut(s)	523, 818, 835, 958, 1103, 1157, 1277, 1526
Hsp92I	GRCGYC	3 cut(s)	317, 450, 1465
Hsp92II	CATG	6 cut(s)	249, 759, 995, 1208, 1270, 1492
HspAI	GCGC	4 cut(s)	317, 450, 568, 740
KasI	GGCGCC	2 cut(s)	316, 449
Ksp22I	TGATCA	1 cut(s)	994
KspI	CCGCGG	1 cut(s)	448
Kzo9I	GATC	6 cut(s)	704, 839, 994, 1026, 1225, 1243
LmnI	GCTCC	2 cut(s)	1018, 1589
LweI	GCATC	4 cut(s)	501, 819, 970, 1336
MabI	ACCWGGT	1 cut(s)	1171
MaeI	CTAG	6 cut(s)	381, 711, 1152, 1211, 1319, 1515
MaeIII	GTNAC	3 cut(s)	768, 1175, 1609
MalI	GATC	6 cut(s)	706, 841, 996, 1028, 1227, 1245
MbiI	CCGCTC	1 cut(s)	212
MboI	GATC	6 cut(s)	704, 839, 994, 1026, 1225, 1243
MboII	GAAGA	4 cut(s)	648, 839, 1268, 1388
MflI	RGATCY	2 cut(s)	704, 1243
MhlI	GDGCHC	1 cut(s)	545
MluCI	AATT	7 cut(s)	481, 664, 1182, 1283, 1381, 1419, 1519
Mly113I	GGCGCC	2 cut(s)	317, 450
MlyI	GAGTC	1 cut(s)	211
MroXI	GAANNNNTTC	2 cut(s)	1091, 1260
MseI	TTAA	1 cut(s)	1422
MslI	CAYNNNNRTG	1 cut(s)	1265
MspA1I	CMGCKG	1 cut(s)	447
MspI	CCGG	6 cut(s)	314, 330, 368, 453, 572, 576
MspR9I	CCNGG	7 cut(s)	331, 368, 516, 572, 577, 1173, 1401
Mva1269I	GAATGC	1 cut(s)	525
MvaI	CCWGG	3 cut(s)	516, 1173, 1401
MvnI	CGCG	1 cut(s)	447
NarI	GGCGCC	2 cut(s)	317, 450
NciI	CCSGG	4 cut(s)	331, 368, 572, 577
NcoI	CCATGG	2 cut(s)	755, 1488
NdeI	CATATG	1 cut(s)	945
NdeII	GATC	6 cut(s)	704, 839, 994, 1026, 1225, 1243
NlaIII	CATG	6 cut(s)	249, 759, 995, 1208, 1270, 1492
NlaIV	GGNNCC	8 cut(s)	6, 318, 451, 916, 1074, 1170, 1245, 1569
NmeAIII	GCCGAG	2 cut(s)	199, 420
NmuCI	GTSAC	1 cut(s)	768
PagI	TCATGA	1 cut(s)	1204
PcsI	WCGNNNNNNNCGW	1 cut(s)	551
PctI	GAATGC	1 cut(s)	525
PdmI	GAANNNNTTC	2 cut(s)	1091, 1260
PfeI	GAWTC	3 cut(s)	238, 1146, 1292
PleI	GAGTC	1 cut(s)	211
PluTI	GGCGCC	2 cut(s)	320, 453
PpsI	GAGTC	1 cut(s)	211
PpuMI	RGGWCCY	2 cut(s)	914, 1072
Psp5II	RGGWCCY	2 cut(s)	914, 1072
Psp6I	CCWGG	3 cut(s)	514, 1171, 1399
PspFI	CCCAGC	1 cut(s)	202
PspGI	CCWGG	3 cut(s)	514, 1171, 1399
PspN4I	GGNNCC	8 cut(s)	6, 318, 451, 916, 1074, 1170, 1245, 1569
PspPI	GGNCC	4 cut(s)	4, 332, 914, 1072
PspPPI	RGGWCCY	2 cut(s)	914, 1072
PstI	CTGCAG	1 cut(s)	1528
PstNI	CAGNNNCTG	1 cut(s)	1163
PsuI	RGATCY	2 cut(s)	704, 1243
RsaI	GTAC	1 cut(s)	1068
RsaNI	GTAC	1 cut(s)	1067
RseI	CAYNNNNRTG	1 cut(s)	1265
SacII	CCGCGG	1 cut(s)	448
SaqAI	TTAA	1 cut(s)	1422
Sau3AI	GATC	6 cut(s)	704, 839, 994, 1026, 1225, 1243
Sau96I	GGNCC	4 cut(s)	4, 332, 914, 1072
SchI	GAGTC	1 cut(s)	211
ScrFI	CCNGG	7 cut(s)	331, 368, 516, 572, 577, 1173, 1401
SduI	GDGCHC	1 cut(s)	545
SexAI	ACCWGGT	1 cut(s)	1171
SfaNI	GCATC	4 cut(s)	501, 819, 970, 1336
SfcI	CTRYAG	2 cut(s)	1429, 1524
SfoI	GGCGCC	2 cut(s)	318, 451
Sfr303I	CCGCGG	1 cut(s)	448
SgrBI	CCGCGG	1 cut(s)	448
SinI	GGWCC	3 cut(s)	4, 914, 1072
SmiMI	CAYNNNNRTG	1 cut(s)	1265
SmlI	CTYRAG	1 cut(s)	729
SmoI	CTYRAG	1 cut(s)	729
SpeI	ACTAGT	1 cut(s)	1151
Sse9I	AATT	7 cut(s)	481, 664, 1182, 1283, 1381, 1419, 1519
SspDI	GGCGCC	2 cut(s)	316, 449
SspMI	CTAG	6 cut(s)	381, 711, 1152, 1211, 1319, 1515
StyD4I	CCNGG	7 cut(s)	329, 366, 514, 570, 575, 1171, 1399
StyI	CCWWGG	3 cut(s)	755, 1022, 1488
TaqI	TCGA	2 cut(s)	554, 827
TaqII	GACCGA	1 cut(s)	313
TasI	AATT	7 cut(s)	481, 664, 1182, 1283, 1381, 1419, 1519
TfiI	GAWTC	3 cut(s)	238, 1146, 1292
Tru1I	TTAA	1 cut(s)	1422
Tru9I	TTAA	1 cut(s)	1422
TseFI	GTSAC	1 cut(s)	768
Tsp45I	GTSAC	1 cut(s)	768
TspDTI	ATGAA	4 cut(s)	734, 1193, 1296, 1431
TspGWI	ACGGA	2 cut(s)	132, 295
VpaK11BI	GGWCC	3 cut(s)	4, 914, 1072
XapI	RAATTY	4 cut(s)	664, 1182, 1283, 1519
XmiI	GTMKAC	1 cut(s)	632
XmnI	GAANNNNTTC	2 cut(s)	1091, 1260
XspI	CTAG	6 cut(s)	381, 711, 1152, 1211, 1319, 1515

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.