AT3G15355

Belongs to the ubiquitin-conjugating enzyme family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0004980
Physical Location & Seq
Forward (+)
5183641 .. 5186929
3289 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G15355.1

Sequence Viewer

Length: 1830 bp
ATGGAGCCCAACGTAGTGGAGATCGCTACTCCTCCTGCCGCTTCTTGCTCGAGAATTCGAACGCCAACAAAGGCTGAAACTCCAGAAGTGATTGATGTGGAGGAATATGATTTGCAAAACGGTGGTGTTCCTAATGGCAACAATGTTGATTATAAGAACAAAGGGAAGGCTATAGACTTTGATTCCATGTCTTACGGTGACTATGGTGAAGAAGATGAGTATGCTGTGGGATCTCCTGGTGATGATTATGGTTATCCTGAATCATCTCCACTATCAAATAGTTTGTTAGACCCAGAGTCTTTGATCTATGAAGACGACGAAAACTATTCCGAACAATATGACTTTGAAATGGAGGCGGAGCCTGATAATTACTCCATGTATCAAGACCTTTTCGATGGTAAGGATATCCCAACTGGTGTGGAGGTTTCAATGGATTGGTTTCCAAATTCAGCTGACAAGGAATCAGCGAGTAGTAGCAAATCGTCTCATGCTAATAACGGGAATAACAGTTCCAAGAAAGCAACAAAAGCAAGTGGAATCCATTCTCAATTTTCTTCAGATATGGAAACCCCTGTAGCTCAACCATGGAATGCTTTACCGCACAAAGCTGAAGGAGTCATACCAAACTCTGCTTATGCCTTGCCACAGAACAGCAAGGCTTTTCAACCACCTTACGCTGTCCACTATTCAGCCCTTAAAACTGCTTTTTCCAATTATCTTCAGCCTCAGACTCCTGATACCGTATTGGGGGAGGCTCCAGCTCCTGCTGCAGGTTCTTCTGGTTTATTGCCACCAAACACACCCGGTTTTAAAAGTAATGCTGCTCGGTTTAAAGAGGAGCCGCCTATATTACCTCCGGATGATTCCAGAGTTAAGAGAAATATGGAGGATTATCTTGGGCTTTATTTGTTTTTCAAAAGATTTGACATCGTCGAAGATTTTTCAGATCACCACTATGCTTCTAAGGGAACAACTTCAAAGCAGCATTCAAAGGATTGGGCGAAAAGGATCCAAGACGAGTGGAGAATTCTTGAGAAAGATTTACCAGAGATGATATTTGTCAGAGCTTATGAATCTAGGATGGATCTTTTAAGGGCTGTAATTATCGGAGCCCAAGGAACTCCCTACCATGATGGTCTCTTCTTTTTTGATATCTTCTTCCCGGATACATACCCTTCTACGCCACCGATTGTTCATTACCATTCTGGTGGGCTAAGAATCAACCCAAATCTGTACAATTGTGGGAAAGTGTGTCTGAGTCTTCTCGGCACTTGGAGTGGTAACCAGAGGGAGAAATGGATCCCCAACACTTCGACGATGCTACAAGTTCTTGTCTCGATCCAAGGTCTAATCTTAAATCAAAAACCTTACTTCAACGAGCCCGGCTACGAGAGGTCAGCAGGTTCTGCACATGGTGAGAGTACCTCTAAAGCTTACAGCGAAAACACATTCATACTGTCTTTAAAGACTATGGTTTACACCATGAGGAGACCACCCAAGTATTTTGAAGACTTTGCGTATGGACATTTCTTCAGCTGTGCTCACGACGTGTTGAAGGCGTGTAATGCTTACAGAAACGGAGCTACACCGGGATATCTGGTGAAGGGGGCTCCAGATGTGGAAGAGAATAGCGCGGGCATGAGCTCTCTGAAGTTTAGGACAGATGTGGCTACCTTTGTGGAGACAGTGCTGTTGAAAGAGTTTATTCTTCTAGGTGTCCTTGGTCTCGAACCGGAAGAAGAAGAAAAAACACCTGAGACTATAATCGTTGCAGAGAGTAGCAAATGTACCAGATCAAGGTCCAAGAGAGACAGAGTTTCTTCTAGTTGA

Protein Analysis

609

Amino Acids

67.77

Weight (kDa)

4.91

Isoelectric Point (pI)

48.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UQ_con PF00179 336 - 467 3.7e-21 Ubiquitin-conjugating enzyme
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 153
Acc36I ACCTGC 2 cut(s) 761, 1391
AccII CGCG 1 cut(s) 1634
AccIII TCCGGA 1 cut(s) 856
AciI CCGC 5 cut(s) 39, 356, 599, 842, 1634
AclWI GGATC 7 cut(s) 238, 1003, 1016, 1092, 1294, 1307, 1333
AcsI RAATTY 3 cut(s) 54, 445, 1026
AcuI CTGAAG 5 cut(s) 540, 630, 704, 1516, 1670
AdeI CACNNNGTG 2 cut(s) 1415, 1549
AfaI GTAC 3 cut(s) 1235, 1423, 1789
AfiI CCNNNNNNNGG 3 cut(s) 747, 770, 1797
AflIII ACRYGT 1 cut(s) 1548
AhdI GACNNNNNGTC 1 cut(s) 295
AjiI CACGTC 1 cut(s) 1549
AjnI CCWGG 1 cut(s) 235
AloI GAACNNNNNNTCC 2 cut(s) 493, 525
AluBI AGCT 9 cut(s) 452, 578, 608, 761, 1067, 1433, 1536, 1583, 1644
AluI AGCT 9 cut(s) 452, 578, 608, 761, 1067, 1433, 1536, 1583, 1644
Alw21I GWGCWC 2 cut(s) 1543, 1646
Alw26I GTCTC 8 cut(s) 489, 1142, 1339, 1483, 1676, 1730, 1751, 1803
AlwI GGATC 7 cut(s) 238, 1003, 1016, 1092, 1294, 1307, 1333
AlwNI CAGNNNCTG 2 cut(s) 764, 1406
Ama87I CYCGRG 1 cut(s) 49
Aor13HI TCCGGA 1 cut(s) 856
ApeKI GCWGC 3 cut(s) 767, 821, 982
ApoI RAATTY 3 cut(s) 54, 445, 1026
Asp700I GAANNNNTTC 2 cut(s) 541, 973
AspLEI GCGC 1 cut(s) 1634
AspS9I GGNCC 1 cut(s) 1800
AsuC2I CCSGG 4 cut(s) 804, 1163, 1383, 1590
AsuHPI GGTGA 6 cut(s) 209, 218, 251, 941, 1427, 1612
AsuII TTCGAA 1 cut(s) 58
AvaI CYCGRG 1 cut(s) 49
AvaII GGWCC 1 cut(s) 1800
BamHI GGATCC 2 cut(s) 1008, 1299
BanII GRGCYC 5 cut(s) 9, 1114, 1383, 1612, 1646
BarI GAAGNNNNNNTAC 2 cut(s) 603, 635
BbsI GAAGAC 3 cut(s) 318, 1253, 1515
Bbv12I GWGCWC 2 cut(s) 1543, 1646
BbvI GCAGC 3 cut(s) 754, 808, 994
BccI CCATC 3 cut(s) 389, 1075, 1127
BciT130I CCWGG 1 cut(s) 237
BciVI GTATCC 1 cut(s) 1159
BcnI CCSGG 4 cut(s) 804, 1163, 1383, 1590
BcoDI GTCTC 8 cut(s) 489, 1142, 1339, 1483, 1676, 1730, 1751, 1803
BfaI CTAG 3 cut(s) 1077, 1712, 1824
BfmI CTRYAG 3 cut(s) 171, 573, 768
BfuAI ACCTGC 2 cut(s) 761, 1391
BfuI GTATCC 1 cut(s) 1159
BisI GCNGC 5 cut(s) 39, 768, 822, 842, 983
BlsI GCNGC 5 cut(s) 40, 769, 823, 843, 984
Bme1390I CCNGG 5 cut(s) 237, 804, 1163, 1383, 1590
Bme18I GGWCC 1 cut(s) 1800
BmeRI GACNNNNNGTC 1 cut(s) 295
BmeT110I CYCGRG 1 cut(s) 49
BmgBI CACGTC 1 cut(s) 1549
BmgT120I GGNCC 1 cut(s) 1800
BmiI GGNNCC 8 cut(s) 6, 360, 756, 840, 1010, 1111, 1301, 1611
BmrFI CCNGG 5 cut(s) 237, 804, 1163, 1383, 1590
BmsI GCATC 1 cut(s) 1308
BpiI GAAGAC 3 cut(s) 318, 1253, 1515
BplI GAGNNNNNCTC 2 cut(s) 1409, 1441
BpmI CTGGAG 3 cut(s) 66, 741, 1596
Bpu14I TTCGAA 1 cut(s) 58
BpuEI CTTGAG 1 cut(s) 1052
BpuMI CCSGG 4 cut(s) 804, 1163, 1383, 1590
BsaI GGTCTC 3 cut(s) 1142, 1483, 1730
BsaJI CCNNGG 4 cut(s) 584, 1114, 1342, 1720
BsaWI WCCGGW 2 cut(s) 856, 1732
Bsc4I CCNNNNNNNGG 3 cut(s) 747, 770, 1797
Bse1I ACTGG 1 cut(s) 418
BseAI TCCGGA 1 cut(s) 856
BseBI CCWGG 1 cut(s) 237
BseDI CCNNGG 4 cut(s) 584, 1114, 1342, 1720
BseGI GGATG 2 cut(s) 865, 1086
BseLI CCNNNNNNNGG 3 cut(s) 747, 770, 1797
BseMII CTCAG 3 cut(s) 740, 1247, 1746
BseNI ACTGG 1 cut(s) 418
BseRI GAGGAG 3 cut(s) 21, 851, 1501
BseXI GCAGC 3 cut(s) 754, 808, 994
BsgI GTGCAG 1 cut(s) 1392
Bsh1236I CGCG 1 cut(s) 1634
BsiHKAI GWGCWC 2 cut(s) 1543, 1646
BsiHKCI CYCGRG 1 cut(s) 49
BsiSI CCGG 6 cut(s) 804, 857, 1163, 1383, 1589, 1733
BslI CCNNNNNNNGG 3 cut(s) 747, 770, 1797
BsmAI GTCTC 8 cut(s) 489, 1142, 1339, 1483, 1676, 1730, 1751, 1803
BsmBI CGTCTC 1 cut(s) 489
BsmI GAATGC 2 cut(s) 595, 985
Bso31I GGTCTC 3 cut(s) 1142, 1483, 1730
BsoBI CYCGRG 1 cut(s) 49
Bsp119I TTCGAA 1 cut(s) 58
Bsp1286I GDGCHC 6 cut(s) 9, 1114, 1383, 1543, 1612, 1646
Bsp13I TCCGGA 1 cut(s) 856
Bsp1407I TGTACA 1 cut(s) 1233
Bsp143I GATC 9 cut(s) 21, 230, 303, 946, 1008, 1084, 1299, 1338, 1793
Bsp19I CCATGG 1 cut(s) 584
BspACI CCGC 5 cut(s) 39, 356, 599, 842, 1634
BspCNI CTCAG 3 cut(s) 739, 1248, 1747
BspEI TCCGGA 1 cut(s) 856
BspFNI CGCG 1 cut(s) 1634
BspLI GGNNCC 8 cut(s) 6, 360, 756, 840, 1010, 1111, 1301, 1611
BspMAI CTGCAG 1 cut(s) 772
BspMI ACCTGC 2 cut(s) 761, 1391
BspPI GGATC 7 cut(s) 238, 1003, 1016, 1092, 1294, 1307, 1333
BspT104I TTCGAA 1 cut(s) 58
BspTNI GGTCTC 3 cut(s) 1142, 1483, 1730
BsrGI TGTACA 1 cut(s) 1233
BsrI ACTGG 1 cut(s) 418
BssECI CCNNGG 4 cut(s) 584, 1114, 1342, 1720
BssMI GATC 9 cut(s) 21, 230, 303, 946, 1008, 1084, 1299, 1338, 1793
BssT1I CCWWGG 4 cut(s) 584, 1114, 1342, 1720
Bst2UI CCWGG 1 cut(s) 237
Bst4CI ACNGT 6 cut(s) 122, 197, 509, 742, 1458, 1687
Bst6I CTCTTC 2 cut(s) 1145, 1617
BstAPI GCANNNNNTGC 1 cut(s) 1406
BstAUI TGTACA 1 cut(s) 1233
BstBI TTCGAA 1 cut(s) 58
BstC8I GCNNGC 1 cut(s) 1636
BstDEI CTNAG 5 cut(s) 726, 963, 1214, 1256, 1755
BstDSI CCRYGG 1 cut(s) 584
BstEII GGTNACC 1 cut(s) 1280
BstENI CCTNNNNNAGG 1 cut(s) 768
BstF5I GGATG 2 cut(s) 865, 1086
BstFNI CGCG 1 cut(s) 1634
BstHHI GCGC 1 cut(s) 1634
BstKTI GATC 9 cut(s) 24, 233, 306, 949, 1011, 1087, 1302, 1341, 1796
BstMAI GTCTC 8 cut(s) 489, 1142, 1339, 1483, 1676, 1730, 1751, 1803
BstMBI GATC 9 cut(s) 21, 230, 303, 946, 1008, 1084, 1299, 1338, 1793
BstMWI GCNNNNNNNGC 4 cut(s) 527, 767, 1406, 1565
BstNI CCWGG 1 cut(s) 237
BstPI GGTNACC 1 cut(s) 1280
BstSCI CCNGG 5 cut(s) 235, 802, 1161, 1381, 1588
BstSFI CTRYAG 3 cut(s) 171, 573, 768
BstUI CGCG 1 cut(s) 1634
BstV1I GCAGC 3 cut(s) 754, 808, 994
BstV2I GAAGAC 3 cut(s) 318, 1253, 1515
BstX2I RGATCY 4 cut(s) 230, 1008, 1084, 1299
BstXI CCANNNNNNTGG 2 cut(s) 16, 1208
BstYI RGATCY 4 cut(s) 230, 1008, 1084, 1299
BsuI GTATCC 1 cut(s) 1159
BtgI CCRYGG 1 cut(s) 584
BtrI CACGTC 1 cut(s) 1549
BtsCI GGATG 2 cut(s) 865, 1086
BtsIMutI CAGTG 1 cut(s) 1692
BveI ACCTGC 2 cut(s) 761, 1391
Cac8I GCNNGC 1 cut(s) 1636
CaiI CAGNNNCTG 2 cut(s) 764, 1406
CfoI GCGC 1 cut(s) 1634
Cfr13I GGNCC 1 cut(s) 1800
Csp6I GTAC 3 cut(s) 1234, 1422, 1788
CspCI CAANNNNNGTGG 4 cut(s) 399, 434, 1001, 1036
CviAII CATG 8 cut(s) 187, 376, 488, 585, 1130, 1412, 1483, 1639
CviQI GTAC 3 cut(s) 1234, 1422, 1788
DdeI CTNAG 5 cut(s) 726, 963, 1214, 1256, 1755
DpnI GATC 9 cut(s) 23, 232, 305, 948, 1010, 1086, 1301, 1340, 1795
DpnII GATC 9 cut(s) 21, 230, 303, 946, 1008, 1084, 1299, 1338, 1793
DraI TTTAAA 3 cut(s) 811, 832, 1464
DraIII CACNNNGTG 2 cut(s) 1415, 1549
DriI GACNNNNNGTC 1 cut(s) 295
Eam1104I CTCTTC 2 cut(s) 1145, 1617
Eam1105I GACNNNNNGTC 1 cut(s) 295
EarI CTCTTC 2 cut(s) 1145, 1617
EciI GGCGGA 1 cut(s) 371
Ecl136II GAGCTC 1 cut(s) 1644
Eco130I CCWWGG 4 cut(s) 584, 1114, 1342, 1720
Eco24I GRGCYC 5 cut(s) 9, 1114, 1383, 1612, 1646
Eco31I GGTCTC 3 cut(s) 1142, 1483, 1730
Eco32I GATATC 3 cut(s) 406, 1153, 1595
Eco47I GGWCC 1 cut(s) 1800
Eco53kI GAGCTC 1 cut(s) 1644
Eco57I CTGAAG 5 cut(s) 540, 630, 704, 1516, 1670
Eco88I CYCGRG 1 cut(s) 49
Eco91I GGTNACC 1 cut(s) 1280
EcoICRI GAGCTC 1 cut(s) 1644
EcoNI CCTNNNNNAGG 1 cut(s) 768
EcoO65I GGTNACC 1 cut(s) 1280
EcoRI GAATTC 2 cut(s) 54, 1026
EcoRII CCWGG 1 cut(s) 235
EcoRV GATATC 3 cut(s) 406, 1153, 1595
EcoT14I CCWWGG 4 cut(s) 584, 1114, 1342, 1720
EcoT38I GRGCYC 5 cut(s) 9, 1114, 1383, 1612, 1646
ErhI CCWWGG 4 cut(s) 584, 1114, 1342, 1720
Esp3I CGTCTC 1 cut(s) 489
FaeI CATG 8 cut(s) 190, 379, 491, 588, 1133, 1415, 1486, 1642
FatI CATG 8 cut(s) 186, 375, 487, 584, 1129, 1411, 1482, 1638
FauI CCCGC 1 cut(s) 1627
Fnu4HI GCNGC 5 cut(s) 39, 768, 822, 842, 983
FokI GGATG 2 cut(s) 872, 1093
FriOI GRGCYC 5 cut(s) 9, 1114, 1383, 1612, 1646
Fsp4HI GCNGC 5 cut(s) 39, 768, 822, 842, 983
FspBI CTAG 3 cut(s) 1077, 1712, 1824
GlaI GCGC 1 cut(s) 1633
GluI GCNGC 5 cut(s) 39, 768, 822, 842, 983
GsuI CTGGAG 3 cut(s) 66, 741, 1596
HapII CCGG 6 cut(s) 804, 857, 1163, 1383, 1589, 1733
HhaI GCGC 1 cut(s) 1634
Hin1II CATG 8 cut(s) 190, 379, 491, 588, 1133, 1415, 1486, 1642
Hin6I GCGC 1 cut(s) 1632
HinP1I GCGC 1 cut(s) 1632
HindIII AAGCTT 1 cut(s) 1431
HpaII CCGG 6 cut(s) 804, 857, 1163, 1383, 1589, 1733
HphI GGTGA 6 cut(s) 209, 218, 251, 941, 1427, 1612
Hpy166II GTNNAC 2 cut(s) 682, 1477
Hpy188I TCNGA 8 cut(s) 331, 559, 729, 946, 1064, 1109, 1257, 1650
Hpy8I GTNNAC 2 cut(s) 682, 1477
Hpy99I CGWCG 4 cut(s) 320, 935, 1318, 1550
HpyAV CCTTC 5 cut(s) 160, 605, 1185, 1549, 1597
HpyCH4III ACNGT 6 cut(s) 122, 197, 509, 742, 1458, 1687
HpyCH4IV ACGT 2 cut(s) 12, 1548
HpyCH4V TGCA 4 cut(s) 115, 770, 1409, 1772
HpyF10VI GCNNNNNNNGC 4 cut(s) 527, 767, 1406, 1565
HpyF3I CTNAG 5 cut(s) 726, 963, 1214, 1256, 1755
HpySE526I ACGT 2 cut(s) 12, 1548
Hsp92II CATG 8 cut(s) 190, 379, 491, 588, 1133, 1415, 1486, 1642
HspAI GCGC 1 cut(s) 1632
Kpn2I TCCGGA 1 cut(s) 856
Kzo9I GATC 9 cut(s) 21, 230, 303, 946, 1008, 1084, 1299, 1338, 1793
LmnI GCTCC 8 cut(s) 4, 358, 760, 766, 838, 1109, 1580, 1615
Lsp1109I GCAGC 3 cut(s) 754, 808, 994
LweI GCATC 1 cut(s) 1308
MaeI CTAG 3 cut(s) 1077, 1712, 1824
MaeII ACGT 2 cut(s) 12, 1548
MaeIII GTNAC 2 cut(s) 197, 1280
MalI GATC 9 cut(s) 23, 232, 305, 948, 1010, 1086, 1301, 1340, 1795
MboI GATC 9 cut(s) 21, 230, 303, 946, 1008, 1084, 1299, 1338, 1793
MfeI CAATTG 1 cut(s) 1237
MflI RGATCY 4 cut(s) 230, 1008, 1084, 1299
MhlI GDGCHC 6 cut(s) 9, 1114, 1383, 1543, 1612, 1646
MluCI AATT 8 cut(s) 54, 367, 445, 548, 712, 1026, 1101, 1237
MlyI GAGTC 4 cut(s) 305, 624, 724, 1267
MroI TCCGGA 1 cut(s) 856
MroXI GAANNNNTTC 2 cut(s) 541, 973
MseI TTAA 7 cut(s) 696, 810, 831, 873, 1091, 1355, 1463
MslI CAYNNNNRTG 2 cut(s) 954, 1206
MspA1I CMGCKG 2 cut(s) 452, 1536
MspI CCGG 6 cut(s) 804, 857, 1163, 1383, 1589, 1733
MspR9I CCNGG 5 cut(s) 237, 804, 1163, 1383, 1590
MunI CAATTG 1 cut(s) 1237
Mva1269I GAATGC 2 cut(s) 595, 985
MvaI CCWGG 1 cut(s) 237
MvnI CGCG 1 cut(s) 1634
MwoI GCNNNNNNNGC 4 cut(s) 527, 767, 1406, 1565
NciI CCSGG 4 cut(s) 804, 1163, 1383, 1590
NcoI CCATGG 1 cut(s) 584
NdeII GATC 9 cut(s) 21, 230, 303, 946, 1008, 1084, 1299, 1338, 1793
NlaIII CATG 8 cut(s) 190, 379, 491, 588, 1133, 1415, 1486, 1642
NlaIV GGNNCC 8 cut(s) 6, 360, 756, 840, 1010, 1111, 1301, 1611
NmeAIII GCCGAG 1 cut(s) 1245
NmuCI GTSAC 1 cut(s) 197
NspV TTCGAA 1 cut(s) 58
PaeR7I CTCGAG 1 cut(s) 49
PctI GAATGC 2 cut(s) 595, 985
PdmI GAANNNNTTC 2 cut(s) 541, 973
PfeI GAWTC 7 cut(s) 182, 260, 461, 537, 863, 1073, 1218
PflFI GACNNNGTC 1 cut(s) 929
PfoI TCCNGGA 1 cut(s) 1161
PkrI GCNGC 5 cut(s) 40, 769, 823, 843, 984
PleI GAGTC 4 cut(s) 304, 623, 724, 1266
PpsI GAGTC 4 cut(s) 304, 623, 724, 1266
PsiI TTATAA 1 cut(s) 153
Psp124BI GAGCTC 1 cut(s) 1646
Psp6I CCWGG 1 cut(s) 235
PspEI GGTNACC 1 cut(s) 1280
PspGI CCWGG 1 cut(s) 235
PspN4I GGNNCC 8 cut(s) 6, 360, 756, 840, 1010, 1111, 1301, 1611
PspPI GGNCC 1 cut(s) 1800
PstI CTGCAG 1 cut(s) 772
PstNI CAGNNNCTG 2 cut(s) 764, 1406
PsuI RGATCY 4 cut(s) 230, 1008, 1084, 1299
PsyI GACNNNGTC 1 cut(s) 929
PvuII CAGCTG 2 cut(s) 452, 1536
RsaI GTAC 3 cut(s) 1235, 1423, 1789
RsaNI GTAC 3 cut(s) 1234, 1422, 1788
RseI CAYNNNNRTG 2 cut(s) 954, 1206
SacI GAGCTC 1 cut(s) 1646
SaqAI TTAA 7 cut(s) 696, 810, 831, 873, 1091, 1355, 1463
SatI GCNGC 5 cut(s) 39, 768, 822, 842, 983
Sau3AI GATC 9 cut(s) 21, 230, 303, 946, 1008, 1084, 1299, 1338, 1793
Sau96I GGNCC 1 cut(s) 1800
SchI GAGTC 4 cut(s) 305, 624, 724, 1267
ScrFI CCNGG 5 cut(s) 237, 804, 1163, 1383, 1590
SduI GDGCHC 6 cut(s) 9, 1114, 1383, 1543, 1612, 1646
SfaNI GCATC 1 cut(s) 1308
SfcI CTRYAG 3 cut(s) 171, 573, 768
Sfr274I CTCGAG 1 cut(s) 49
SfuI TTCGAA 1 cut(s) 58
SinI GGWCC 1 cut(s) 1800
SlaI CTCGAG 1 cut(s) 49
SmiMI CAYNNNNRTG 2 cut(s) 954, 1206
SmlI CTYRAG 2 cut(s) 49, 1031
SmoI CTYRAG 2 cut(s) 49, 1031
Sse9I AATT 8 cut(s) 54, 367, 445, 548, 712, 1026, 1101, 1237
SsiI CCGC 5 cut(s) 39, 356, 599, 842, 1634
SspMI CTAG 3 cut(s) 1077, 1712, 1824
SstI GAGCTC 1 cut(s) 1646
StyD4I CCNGG 5 cut(s) 235, 802, 1161, 1381, 1588
StyI CCWWGG 4 cut(s) 584, 1114, 1342, 1720
TaaI ACNGT 6 cut(s) 122, 197, 509, 742, 1458, 1687
TaiI ACGT 2 cut(s) 15, 1551
TaqI TCGA 7 cut(s) 50, 58, 393, 933, 1313, 1337, 1728
TasI AATT 8 cut(s) 54, 367, 445, 548, 712, 1026, 1101, 1237
TatI WGTACW 1 cut(s) 1233
TauI GCSGC 2 cut(s) 41, 844
TfiI GAWTC 7 cut(s) 182, 260, 461, 537, 863, 1073, 1218
Tru1I TTAA 7 cut(s) 696, 810, 831, 873, 1091, 1355, 1463
Tru9I TTAA 7 cut(s) 696, 810, 831, 873, 1091, 1355, 1463
TscAI CASTG 1 cut(s) 1692
TseFI GTSAC 1 cut(s) 197
TseI GCWGC 3 cut(s) 767, 821, 982
Tsp45I GTSAC 1 cut(s) 197
TspDTI ATGAA 4 cut(s) 324, 1086, 1184, 1441
TspGWI ACGGA 1 cut(s) 1593
TspRI CASTG 1 cut(s) 1692
Tth111I GACNNNGTC 1 cut(s) 929
VpaK11BI GGWCC 1 cut(s) 1800
XagI CCTNNNNNAGG 1 cut(s) 768
XapI RAATTY 3 cut(s) 54, 445, 1026
XhoI CTCGAG 1 cut(s) 49
XmnI GAANNNNTTC 2 cut(s) 541, 973
XspI CTAG 3 cut(s) 1077, 1712, 1824
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.