Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0004980

Physical Location & Seq

Genomic Coordinates Reverse (-)

31262171 .. 31267875

Gene Structure 5705 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1227200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2145 bp

ATGGAGCCGCCGCCGTTACATACAAACACCCCTCGGAATTCCAAGAAGAAGCGGTTGTTTTCCGATAGGGGTTCTGGGTGCATGGATTCCGACGACGTCGTGGAGATTTCGCCGCCGGCTACTCCGATCACTCGGGCCCCCAAATTTCAGAAACTCAAACTCAAAGAGGTAATTCGGCATGATGTGATTGAAATTGATGAAGATGAAGATTCAGTTGCTGCAATGCTTATTGATGATAGAGTTGATAACAAAGCCAAAGGGAAGGCAATAGAAAACTCTTCTGATGGCTACTATGATTATAAGTATTTTCAGGAAGATGAGGTCAATAGCCTTTTTGGCCCTTCTGTTATGGCAACCCCTGAGTCAGCGAATGGGATTGAAGCTACTAAGGGTTTTGTTCCAGCTAACGTGATCAACTTAGATGGTCATACTTCTGATTTGTCATATGAAGATGATGACTTCGCTGATCCTTTTCTTGATGAGTTTATGGATGTTGATGAGTATGCCCAATTGCAAGCCCATTTTGATAATGTGGATATTCCCCCTGGAATAGAGGCACCTATTCCTTGGTTGTCGGATCCTCCTAAAAATAAAGTTAATTCAGTTTCTGGAAGTAGTTCTGTCAATAAGAGGTTTCAAATGCAACAAGAGCCTGATCATTTCATTAAGAAGCCACTTTTAGGGGGTAGTTCAAATTTGAAGACCCAAATTGATAGTATTTCCCACCCACCTGAAGTGAATCTATCATCTGCATGGAATCTTCCGAAAACTGCCAGGAGTAAAAAGAAACAACCTGCTTCACAACACCAAGGGAGTGCTCCTAATCTCCCAGTTGGGAAGGAGTCATCAAAGTCTCAATGGCTTTTAGGACCTTTCCAGTCAAAAAAGAAGGTAGCTTCTTCAAGTACTTCGACGAATCAATTTGACGCAATGAAGCTTGGTTCCGGAGCTGACACATCTTCTGCTTCGTATTTTCATAGCATTCTAAAGAAAAAGGGTTCAAGTGCTTTTTATAAACCCATGCCCATTCCTGGGTGGCCCGGGCCCATTTCCAAATTTAATACTATGCCATTTAATTCAAGCTTGTACGATCTAGATTCATTATATTCTCCTGGGGAAGTAGCAGGTAGTCCTTGGATTGCTAATGCGCAAATTCAAAACAATCTTGCTCCAGGAGGCATTTCAACAAGCCCTGGGAGGAAAATTTCTGCCATGGAAATGGATGAAATGATAGTGAAGTTTAAGGGCTTCAAAAAATTTGATACAGTTGAAGATCATTCAGACCATCACTTTAGTAGGTGTGGCTATTCACCGAAGCAACCACCAAAGAGTTGGGCAAAGAGAATTCAGGAAGAGTGGAAGATCCTGGAGAAGGATTTGCCTGATACAATATTTGTTAGAGCTTATGAGACAAGAATGGATCTTTTGAGAGCTGTAATTGTTGGGGCGGAGGGTACTCCTTACCATGATGGTCTCTTCTTCTTTGATGTTTGCTTCCCCTGTGGCTATCCCAATGTTCCACCGAATGTCTACTACCACTCTGGTGGCCTTCGATTAAATCCAAATTTGTACAATTGTGGAAAAGTATGCCTCAGCCTTCTTAACACCTGGTCTGGGAACAAGAATGAGAAGTGGCTCCCAGGTGTGTCAACCATGCTACAAGTGTTGGTCTCTATACAAGGGCTGATCTTGAATACAAAGCCCTACTTTAATGAGCCTGGATATGCAAATACGAATGGTTCAGCAGCTGGTGAAAAGAGGTCTGAGGAGTACAATGAGAATACATTCATCCTATCATTGAAGACAATGGTGTACAGCATGAGGAGGCCTCCGAAGCATTTTGAGGATCTTGTTCTGGGGCATTTCTACAATCGTGCTCGTGACATTCTGGTGGCATGCAAAGCATACATGGATGGTGCTCAAGTGGGGTGTCTAGTCAAAGGTGGTGTTCAAGATGTTGATGAGGGTGACAAGAGCTGCTCACAGCGTTTCAAAACTTCTGTAGCCGACCATGTGCCTATGATTGTCGCAGAGTTTACAAGGATCGGGGTCAAGGATTGTGAGAGATTCGTATCACCAGCAACATCTGGGAACAACCAAATTGCCAGTATGCCTCAGGCTGCAACGTCAATGATTTCATGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019899 GO:0031625 GO:0032446 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044389 GO:0044424 GO:0044464 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

UQ_con

Protein Analysis

715

Amino Acids

78.98

Weight (kDa)

6.1

Isoelectric Point (pI)

43.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UQ_con	PF00179	448 - 593	1.8e-20	Ubiquitin-conjugating enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004980)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G15355
fragaria_vesca	FvH4_3g20000 FvH4_3g20000 FvH4_3g20000 FvH4_3g20000 FvH4_3g20000 FvH4_3g20000 FvH4_3g20000
malus_domestica	MD03G1227200.v1.1 MD11G1246700.v1.1
prunus_persica	Prupe.4G181600_v2.0.a1 Prupe.4G181600_v2.0.a1 Prupe.4G181600_v2.0.a1
pyrus_communis	pycom03g17490 pycom11g21880
rosa_chinensis	RchiOBHm_Chr5g0033831
rosa_laevigata	RLG00000033504
rosa_multiflora	Rmu_co8216886.1_g000001 Rmu_co8329207.1_g000001 Rmu_sc0001768.1_g000061 Rmu_sc0008210.1_g000001
rosa_roxburghii	Rroxscaffold_1G00046350
rosa_rugosa	Rorug05G0142600 Rorug05G0142700.1 Rorug05G0142800
rosa_samantha	Rh5AG233600 Rh5BG234100 Rh5CG264200 Rh5DG240900
rosa_wichuraiana	Rw5G021560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	300, 1014
AatII	GACGTC	1 cut(s)	99
Acc16I	TGCGCA	1 cut(s)	1149
Acc36I	ACCTGC	2 cut(s)	802, 1115
AccB1I	GGYRCC	1 cut(s)	556
AccI	GTMKAC	1 cut(s)	1530
AccIII	TCCGGA	1 cut(s)	944
AciI	CCGC	5 cut(s)	8, 11, 52, 113, 1448
AclWI	GGATC	7 cut(s)	461, 572, 585, 1357, 1428, 1854, 2051
AcsI	RAATTY	9 cut(s)	37, 143, 694, 1055, 1152, 1203, 1256, 1344, 1564
AcuI	CTGAAG	1 cut(s)	753
AcyI	GRCGYC	1 cut(s)	96
AfaI	GTAC	6 cut(s)	907, 1088, 1456, 1571, 1772, 1814
AfiI	CCNNNNNNNGG	5 cut(s)	680, 1031, 1032, 1372, 1614
AleI	CACNNNNGTG	1 cut(s)	1542
Alw21I	GWGCWC	3 cut(s)	820, 1879, 1921
Alw26I	GTCTC	4 cut(s)	858, 1403, 1478, 1675
AlwI	GGATC	7 cut(s)	461, 572, 585, 1357, 1428, 1854, 2051
AlwNI	CAGNNNCTG	3 cut(s)	218, 608, 1748
Ama87I	CYCGRG	2 cut(s)	132, 1040
Aor13HI	TCCGGA	1 cut(s)	944
AoxI	GGCC	6 cut(s)	135, 337, 1037, 1043, 1546, 1826
ApaI	GGGCCC	2 cut(s)	139, 1047
ApeKI	GCWGC	4 cut(s)	218, 1745, 1977, 2120
ApoI	RAATTY	9 cut(s)	37, 143, 694, 1055, 1152, 1203, 1256, 1344, 1564
Asp700I	GAANNNNTTC	2 cut(s)	616, 1784
AspLEI	GCGC	1 cut(s)	1150
AspS9I	GGNCC	7 cut(s)	135, 136, 338, 869, 1038, 1043, 1044
AsuC2I	CCSGG	2 cut(s)	1041, 1042
AsuHPI	GGTGA	4 cut(s)	1302, 1763, 1979, 2067
AvaI	CYCGRG	2 cut(s)	132, 1040
AvaII	GGWCC	1 cut(s)	869
AxyI	CCTNAGG	1 cut(s)	2115
BaeGI	GKGCMC	2 cut(s)	139, 1047
BamHI	GGATCC	1 cut(s)	577
BanI	GGYRCC	1 cut(s)	556
BanII	GRGCYC	2 cut(s)	139, 1047
BauI	CACGAG	1 cut(s)	1878
BbsI	GAAGAC	2 cut(s)	707, 1808
Bbv12I	GWGCWC	3 cut(s)	820, 1879, 1921
BbvCI	CCTCAGC	1 cut(s)	1592
BbvI	GCAGC	4 cut(s)	205, 1757, 1964, 2107
BccI	CCATC	5 cut(s)	278, 416, 1293, 1463, 1907
BclI	TGATCA	2 cut(s)	411, 655
BcnI	CCSGG	2 cut(s)	1041, 1042
BcoDI	GTCTC	4 cut(s)	858, 1403, 1478, 1675
BfaI	CTAG	2 cut(s)	1094, 1934
BfmI	CTRYAG	1 cut(s)	2001
BfuAI	ACCTGC	2 cut(s)	802, 1115
BglI	GCCNNNNNGGC	1 cut(s)	336
BisI	GCNGC	7 cut(s)	8, 11, 113, 219, 1746, 1978, 2121
BlsI	GCNGC	7 cut(s)	9, 12, 114, 220, 1747, 1979, 2122
BmcAI	AGTACT	1 cut(s)	907
Bme18I	GGWCC	1 cut(s)	869
BmeT110I	CYCGRG	2 cut(s)	132, 1040
BmgT120I	GGNCC	7 cut(s)	135, 136, 338, 869, 1038, 1043, 1044
BmiI	GGNNCC	8 cut(s)	6, 137, 138, 558, 579, 943, 1045, 1637
BmrI	ACTGGG	1 cut(s)	824
BmuI	ACTGGG	1 cut(s)	824
BpiI	GAAGAC	2 cut(s)	707, 1808
BplI	GAGNNNNNCTC	2 cut(s)	1813, 1845
BpmI	CTGGAG	2 cut(s)	1155, 1388
Bpu10I	CCTNAGC	1 cut(s)	1592
BpuEI	CTTGAG	1 cut(s)	1905
BpuMI	CCSGG	2 cut(s)	1041, 1042
BsaBI	GATNNNNATC	1 cut(s)	2071
BsaHI	GRCGYC	1 cut(s)	96
BsaI	GGTCTC	2 cut(s)	1478, 1675
BsaWI	WCCGGW	1 cut(s)	944
Bsc4I	CCNNNNNNNGG	5 cut(s)	680, 1031, 1032, 1372, 1614
Bse118I	RCCGGY	1 cut(s)	115
Bse1I	ACTGG	3 cut(s)	830, 877, 2106
Bse21I	CCTNAGG	1 cut(s)	2115
Bse3DI	GCAATG	2 cut(s)	228, 936
Bse8I	GATNNNNATC	1 cut(s)	2071
BseAI	TCCGGA	1 cut(s)	944
BseGI	GGATG	4 cut(s)	496, 1228, 1788, 1918
BseJI	GATNNNNATC	1 cut(s)	2071
BseLI	CCNNNNNNNGG	5 cut(s)	680, 1031, 1032, 1372, 1614
BseMI	GCAATG	2 cut(s)	228, 936
BseMII	CTCAG	4 cut(s)	351, 1606, 1755, 2129
BseNI	ACTGG	3 cut(s)	830, 877, 2106
BseRI	GAGGAG	2 cut(s)	1781, 1837
BseSI	GKGCMC	2 cut(s)	139, 1047
BseXI	GCAGC	4 cut(s)	205, 1757, 1964, 2107
BshFI	GGCC	6 cut(s)	137, 339, 1039, 1045, 1548, 1828
BshNI	GGYRCC	1 cut(s)	556
BsiHKAI	GWGCWC	3 cut(s)	820, 1879, 1921
BsiHKCI	CYCGRG	2 cut(s)	132, 1040
BsiSI	CCGG	3 cut(s)	116, 945, 1041
BslI	CCNNNNNNNGG	5 cut(s)	680, 1031, 1032, 1372, 1614
BsmAI	GTCTC	4 cut(s)	858, 1403, 1478, 1675
BsmI	GAATGC	1 cut(s)	981
BsnI	GGCC	6 cut(s)	137, 339, 1039, 1045, 1548, 1828
Bso31I	GGTCTC	2 cut(s)	1478, 1675
BsoBI	CYCGRG	2 cut(s)	132, 1040
Bsp120I	GGGCCC	2 cut(s)	135, 1043
Bsp1286I	GDGCHC	5 cut(s)	139, 820, 1047, 1879, 1921
Bsp13I	TCCGGA	1 cut(s)	944
Bsp1407I	TGTACA	2 cut(s)	1569, 1812
Bsp19I	CCATGG	1 cut(s)	1212
BspACI	CCGC	5 cut(s)	8, 11, 52, 113, 1448
BspANI	GGCC	6 cut(s)	137, 339, 1039, 1045, 1548, 1828
BspCNI	CTCAG	4 cut(s)	352, 1605, 1756, 2128
BspEI	TCCGGA	1 cut(s)	944
BspLI	GGNNCC	8 cut(s)	6, 137, 138, 558, 579, 943, 1045, 1637
BspMI	ACCTGC	2 cut(s)	802, 1115
BspPI	GGATC	7 cut(s)	461, 572, 585, 1357, 1428, 1854, 2051
BspT107I	GGYRCC	1 cut(s)	556
BspTNI	GGTCTC	2 cut(s)	1478, 1675
BsrDI	GCAATG	2 cut(s)	228, 936
BsrFI	RCCGGY	1 cut(s)	115
BsrGI	TGTACA	2 cut(s)	1569, 1812
BsrI	ACTGG	3 cut(s)	830, 877, 2106
BssAI	RCCGGY	1 cut(s)	115
BssNI	GRCGYC	1 cut(s)	96
BssSI	CACGAG	1 cut(s)	1878
BssT1I	CCWWGG	4 cut(s)	566, 808, 1133, 1212
Bst2BI	CACGAG	1 cut(s)	1878
Bst4CI	ACNGT	1 cut(s)	1267
Bst6I	CTCTTC	3 cut(s)	283, 1347, 1481
BstACI	GRCGYC	1 cut(s)	96
BstAUI	TGTACA	2 cut(s)	1569, 1812
BstC8I	GCNNGC	3 cut(s)	117, 516, 1897
BstDEI	CTNAG	6 cut(s)	360, 387, 418, 1592, 1764, 2115
BstDSI	CCRYGG	1 cut(s)	1212
BstENI	CCTNNNNNAGG	1 cut(s)	1370
BstF5I	GGATG	4 cut(s)	496, 1228, 1788, 1918
BstHHI	GCGC	1 cut(s)	1150
BstMAI	GTCTC	4 cut(s)	858, 1403, 1478, 1675
BstMWI	GCNNNNNNNGC	4 cut(s)	336, 649, 1834, 1901
BstNSI	RCATGY	1 cut(s)	1899
BstSFI	CTRYAG	1 cut(s)	2001
BstSLI	GKGCMC	2 cut(s)	139, 1047
BstV1I	GCAGC	4 cut(s)	205, 1757, 1964, 2107
BstV2I	GAAGAC	2 cut(s)	707, 1808
BstX2I	RGATCY	4 cut(s)	577, 1362, 1420, 1846
BstXI	CCANNNNNNTGG	3 cut(s)	1219, 1332, 1544
BstYI	RGATCY	4 cut(s)	577, 1362, 1420, 1846
Bsu36I	CCTNAGG	1 cut(s)	2115
BsuRI	GGCC	6 cut(s)	137, 339, 1039, 1045, 1548, 1828
BtgI	CCRYGG	1 cut(s)	1212
BtsCI	GGATG	4 cut(s)	496, 1228, 1788, 1918
BveI	ACCTGC	2 cut(s)	802, 1115
Cac8I	GCNNGC	3 cut(s)	117, 516, 1897
CaiI	CAGNNNCTG	3 cut(s)	218, 608, 1748
CfoI	GCGC	1 cut(s)	1150
Cfr10I	RCCGGY	1 cut(s)	115
Cfr13I	GGNCC	7 cut(s)	135, 136, 338, 869, 1038, 1043, 1044
Cfr9I	CCCGGG	1 cut(s)	1040
CseI	GACGC	1 cut(s)	935
CsiI	ACCWGGT	1 cut(s)	1607
Csp6I	GTAC	6 cut(s)	906, 1087, 1455, 1570, 1771, 1813
CviQI	GTAC	6 cut(s)	906, 1087, 1455, 1570, 1771, 1813
DdeI	CTNAG	6 cut(s)	360, 387, 418, 1592, 1764, 2115
Eam1104I	CTCTTC	3 cut(s)	283, 1347, 1481
EarI	CTCTTC	3 cut(s)	283, 1347, 1481
EciI	GGCGGA	1 cut(s)	1463
Eco130I	CCWWGG	4 cut(s)	566, 808, 1133, 1212
Eco147I	AGGCCT	1 cut(s)	1828
Eco24I	GRGCYC	2 cut(s)	139, 1047
Eco31I	GGTCTC	2 cut(s)	1478, 1675
Eco47I	GGWCC	1 cut(s)	869
Eco57I	CTGAAG	1 cut(s)	753
Eco81I	CCTNAGG	1 cut(s)	2115
Eco88I	CYCGRG	2 cut(s)	132, 1040
EcoNI	CCTNNNNNAGG	1 cut(s)	1370
EcoO109I	RGGNCCY	2 cut(s)	136, 869
EcoRI	GAATTC	2 cut(s)	37, 1344
EcoT14I	CCWWGG	4 cut(s)	566, 808, 1133, 1212
EcoT38I	GRGCYC	2 cut(s)	139, 1047
ErhI	CCWWGG	4 cut(s)	566, 808, 1133, 1212
FalI	AAGNNNNNCTT	2 cut(s)	1691, 1723
FauNDI	CATATG	1 cut(s)	445
FbaI	TGATCA	2 cut(s)	411, 655
FblI	GTMKAC	1 cut(s)	1530
Fnu4HI	GCNGC	7 cut(s)	8, 11, 113, 219, 1746, 1978, 2121
FokI	GGATG	4 cut(s)	503, 1235, 1775, 1925
FriOI	GRGCYC	2 cut(s)	139, 1047
Fsp4HI	GCNGC	7 cut(s)	8, 11, 113, 219, 1746, 1978, 2121
FspBI	CTAG	2 cut(s)	1094, 1934
FspI	TGCGCA	1 cut(s)	1149
GlaI	GCGC	1 cut(s)	1149
GluI	GCNGC	7 cut(s)	8, 11, 113, 219, 1746, 1978, 2121
GsuI	CTGGAG	2 cut(s)	1155, 1388
HaeIII	GGCC	6 cut(s)	137, 339, 1039, 1045, 1548, 1828
HapII	CCGG	3 cut(s)	116, 945, 1041
HgaI	GACGC	1 cut(s)	935
HhaI	GCGC	1 cut(s)	1150
Hin1I	GRCGYC	1 cut(s)	96
Hin6I	GCGC	1 cut(s)	1148
HinP1I	GCGC	1 cut(s)	1148
HincII	GTYRAC	1 cut(s)	1650
HindII	GTYRAC	1 cut(s)	1650
HindIII	AAGCTT	2 cut(s)	935, 1081
HinfI	GANTC	9 cut(s)	86, 209, 362, 739, 757, 842, 916, 1097, 2067
HpaII	CCGG	3 cut(s)	116, 945, 1041
HphI	GGTGA	4 cut(s)	1302, 1763, 1979, 2067
Hpy166II	GTNNAC	4 cut(s)	1531, 1650, 1813, 2037
Hpy188III	TCNNGA	9 cut(s)	311, 476, 609, 945, 1094, 1349, 1690, 1880, 1952
Hpy8I	GTNNAC	4 cut(s)	1531, 1650, 1813, 2037
Hpy99I	CGWCG	4 cut(s)	95, 98, 101, 916
HpyAV	CCTTC	7 cut(s)	256, 351, 832, 883, 1366, 1559, 1607
HpyCH4III	ACNGT	1 cut(s)	1267
HpyCH4IV	ACGT	3 cut(s)	96, 408, 2126
HpyCH4V	TGCA	8 cut(s)	81, 221, 514, 643, 752, 1727, 1899, 2123
HpyF10VI	GCNNNNNNNGC	4 cut(s)	336, 649, 1834, 1901
HpyF3I	CTNAG	6 cut(s)	360, 387, 418, 1592, 1764, 2115
HpySE526I	ACGT	3 cut(s)	96, 408, 2126
Hsp92I	GRCGYC	1 cut(s)	96
HspAI	GCGC	1 cut(s)	1148
Kpn2I	TCCGGA	1 cut(s)	944
KroI	GCCGGC	1 cut(s)	115
KroNI	GCCGGC	1 cut(s)	117
Ksp22I	TGATCA	2 cut(s)	411, 655
LmnI	GCTCC	5 cut(s)	4, 823, 947, 1174, 1641
Lsp1109I	GCAGC	4 cut(s)	205, 1757, 1964, 2107
MabI	ACCWGGT	1 cut(s)	1607
MaeI	CTAG	2 cut(s)	1094, 1934
MaeII	ACGT	3 cut(s)	96, 408, 2126
MaeIII	GTNAC	3 cut(s)	15, 1880, 1967
MfeI	CAATTG	2 cut(s)	509, 1573
MflI	RGATCY	4 cut(s)	577, 1362, 1420, 1846
MhlI	GDGCHC	5 cut(s)	139, 820, 1047, 1879, 1921
MlyI	GAGTC	2 cut(s)	371, 851
MmeI	TCCRAC	2 cut(s)	114, 555
MroI	TCCGGA	1 cut(s)	944
MroNI	GCCGGC	1 cut(s)	115
MroXI	GAANNNNTTC	2 cut(s)	616, 1784
MseI	TTAA	8 cut(s)	597, 666, 1059, 1074, 1242, 1556, 1602, 1710
MslI	CAYNNNNRTG	4 cut(s)	751, 1217, 1542, 1889
MspA1I	CMGCKG	1 cut(s)	1748
MspI	CCGG	3 cut(s)	116, 945, 1041
MunI	CAATTG	2 cut(s)	509, 1573
Mva1269I	GAATGC	1 cut(s)	981
MwoI	GCNNNNNNNGC	4 cut(s)	336, 649, 1834, 1901
NaeI	GCCGGC	1 cut(s)	117
NciI	CCSGG	2 cut(s)	1041, 1042
NcoI	CCATGG	1 cut(s)	1212
NdeI	CATATG	1 cut(s)	445
NgoMIV	GCCGGC	1 cut(s)	115
NlaIV	GGNNCC	8 cut(s)	6, 137, 138, 558, 579, 943, 1045, 1637
NmuCI	GTSAC	2 cut(s)	1880, 1967
NsbI	TGCGCA	1 cut(s)	1149
NspI	RCATGY	1 cut(s)	1899
OliI	CACNNNNGTG	1 cut(s)	1542
PaeI	GCATGC	1 cut(s)	1899
PasI	CCCWGGG	1 cut(s)	1193
PceI	AGGCCT	1 cut(s)	1828
PctI	GAATGC	1 cut(s)	981
PdiI	GCCGGC	1 cut(s)	117
PdmI	GAANNNNTTC	2 cut(s)	616, 1784
PfeI	GAWTC	7 cut(s)	86, 209, 739, 757, 916, 1097, 2067
PflFI	GACNNNGTC	1 cut(s)	95
PfoI	TCCNGGA	2 cut(s)	1171, 1365
PkrI	GCNGC	7 cut(s)	9, 12, 114, 220, 1747, 1979, 2122
PleI	GAGTC	2 cut(s)	370, 850
PpsI	GAGTC	2 cut(s)	370, 850
PpuMI	RGGWCCY	1 cut(s)	869
PsiI	TTATAA	2 cut(s)	300, 1014
Psp5II	RGGWCCY	1 cut(s)	869
PspN4I	GGNNCC	8 cut(s)	6, 137, 138, 558, 579, 943, 1045, 1637
PspOMI	GGGCCC	2 cut(s)	135, 1043
PspPI	GGNCC	7 cut(s)	135, 136, 338, 869, 1038, 1043, 1044
PspPPI	RGGWCCY	1 cut(s)	869
PstNI	CAGNNNCTG	3 cut(s)	218, 608, 1748
PsuI	RGATCY	4 cut(s)	577, 1362, 1420, 1846
PsyI	GACNNNGTC	1 cut(s)	95
PvuII	CAGCTG	1 cut(s)	1748
RsaI	GTAC	6 cut(s)	907, 1088, 1456, 1571, 1772, 1814
RsaNI	GTAC	6 cut(s)	906, 1087, 1455, 1570, 1771, 1813
RseI	CAYNNNNRTG	4 cut(s)	751, 1217, 1542, 1889
SaqAI	TTAA	8 cut(s)	597, 666, 1059, 1074, 1242, 1556, 1602, 1710
SatI	GCNGC	7 cut(s)	8, 11, 113, 219, 1746, 1978, 2121
Sau96I	GGNCC	7 cut(s)	135, 136, 338, 869, 1038, 1043, 1044
ScaI	AGTACT	1 cut(s)	907
SchI	GAGTC	2 cut(s)	371, 851
SduI	GDGCHC	5 cut(s)	139, 820, 1047, 1879, 1921
SexAI	ACCWGGT	1 cut(s)	1607
SfcI	CTRYAG	1 cut(s)	2001
SinI	GGWCC	1 cut(s)	869
SmaI	CCCGGG	1 cut(s)	1042
SmiMI	CAYNNNNRTG	4 cut(s)	751, 1217, 1542, 1889
SmlI	CTYRAG	1 cut(s)	1920
SmoI	CTYRAG	1 cut(s)	1920
SphI	GCATGC	1 cut(s)	1899
SrfI	GCCCGGGC	1 cut(s)	1042
SseBI	AGGCCT	1 cut(s)	1828
SsiI	CCGC	5 cut(s)	8, 11, 52, 113, 1448
SspI	AATATT	1 cut(s)	1392
SspMI	CTAG	2 cut(s)	1094, 1934
StuI	AGGCCT	1 cut(s)	1828
StyI	CCWWGG	4 cut(s)	566, 808, 1133, 1212
TaaI	ACNGT	1 cut(s)	1267
TaiI	ACGT	3 cut(s)	99, 411, 2129
TaqI	TCGA	2 cut(s)	911, 1552
TatI	WGTACW	4 cut(s)	905, 1569, 1770, 1812
TauI	GCSGC	3 cut(s)	10, 13, 115
TfiI	GAWTC	7 cut(s)	86, 209, 739, 757, 916, 1097, 2067
Tru1I	TTAA	8 cut(s)	597, 666, 1059, 1074, 1242, 1556, 1602, 1710
Tru9I	TTAA	8 cut(s)	597, 666, 1059, 1074, 1242, 1556, 1602, 1710
TseFI	GTSAC	2 cut(s)	1880, 1967
TseI	GCWGC	4 cut(s)	218, 1745, 1977, 2120
Tsp45I	GTSAC	2 cut(s)	1880, 1967
TspMI	CCCGGG	1 cut(s)	1040
Tth111I	GACNNNGTC	1 cut(s)	95
VpaK11BI	GGWCC	1 cut(s)	869
XagI	CCTNNNNNAGG	1 cut(s)	1370
XapI	RAATTY	9 cut(s)	37, 143, 694, 1055, 1152, 1203, 1256, 1344, 1564
XbaI	TCTAGA	1 cut(s)	1093
XceI	RCATGY	1 cut(s)	1899
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1329
XmaI	CCCGGG	1 cut(s)	1040
XmiI	GTMKAC	1 cut(s)	1530
XmnI	GAANNNNTTC	2 cut(s)	616, 1784
XspI	CTAG	2 cut(s)	1094, 1934
ZraI	GACGTC	1 cut(s)	97
ZrmI	AGTACT	1 cut(s)	907

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.