Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0004980

Physical Location & Seq

Genomic Coordinates Reverse (-)

24905579 .. 24910718

Gene Structure 5140 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom11g21880.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2070 bp

ATGGATTCCGAGGACGTCGTAGAGATTCCGCCTCCGGCTACTCCGACTACCCGGGCCCCGAAATTTCAGAAGCTCAAACTCAAAGAGGTTCTTCGGTATGATGTGATTGAAATTGACGAAGATGAAGATCCAGTCGCTGCAATGATTATCGATGATCCAGTTGATATAAGTGGCAAGGGGAAGGCAATCAGAAGCTCTTCTGATGGCTACCATGATCATCAAGATAAGTATTTTCAGGAAGCTGAGGTCAATAGCTATTTTGGCCCTCCTGGTATGGCAACCCCTGGGTCAGCGAATGGGATTGAAGCTGCTAAGAGTTTTGTCCCAGCTAACGTGATCAACTTAGATGGTCATACTTCTGATTTATCATATGAAGATGACGACTTTGCTGATTTTTTTCTTGATGAGTTTATGGATGTCGATGAGTATGCCCAATTGCAAGCCCATTTTGATAATGTGGATATTCCCCCTGGAATAGAGGCACCTATTCCTTGGTTGTCGGATCCTTTTAAAAGTAAAGTTAAATCAATTTCTGGAAGTATTTCTGTCGATAAGACGTTTCAAATGCAACCAGAGCCTGATCATTTCAGCAAGAAGCCACTTTTTGGGGGTAGTTCAAGCTTGAAGACCCAAATTGATAGTACTGCCCACCCACCTGAAGTGAATCTATCATCAGCATGGAAACTTCCGAAAATTGCCAGGAGTAAAAAGAAACAACCTGCTTTGCAACATCAAGGGAGTGCTCCTAATTTCCCAGTTGGGAAAGAGTCATCAAAATCTCAATGGCTTTTAGGACTCCAGCCTAAAAAGAAGCTCGCTTCTTCGAGTGGTTCAACGAATCACTTTGATGCAATGAAGCTTGGTTCCGAAGCTGACACATCTTCTGCATCGTACTTTCATAACATTCTAGAGAAAAAGGGTTCAAGTGCTTCTTTTAAACCCATGCCCGTTCCTGGGTGGCCGGGGCCCATTTCCAAATTTAATACCATGCCATTTAATTCAAGCTTCTACGATCCATTGGGTTCAGCATTTCCTCCTGGGGAAGTAGCAGGTAGTCCTTGGATTCCTAATGCGCAAATTCAGAATAATCTTGCTCCAGGAGGCATTTCAACAGGCCCTGGGAGGAAAATTTCTGCCATGGAAATGGATGAAATTATACTGAAGTTTCAGGGTTTCAAACAATTTGATACAGTTGAAGATCATTCAGACCATCACTATATTACGCGTGGTTATTCAACAAAGCAGCCACCAAAGAATTGGGCAAAGAGAATTCAGGAAGAGTGGAAGATCCTGGAGAAGGATTTGCCTGATACAATATTTGTTAGAGCTTATGAGACAAGAATGGATCTTTTGAGAGCTGTAATTATTGGGGCGGAGGGTACTCCTTACCATGATGGTCTCTTCTTCTTTGATGTTTGCTTCCCCAGTGGCTATCCCAATGTACCACCGAATGTTTACTACCATTCTGGTGGCCTTCGATTAAATCCAAATTTGTACAATTGTGGAAAAGTATGCCTCAGCCTTCTTAACACCTGGTCTGGGAACAAGAATGAGAAGTGGCTCCCGGGTGTGTCAACCATGCTACAAGTTTTGGTCTCTATACAAGGGCTTATCTTGAACACAAAGCCCTACTTTAATGAGCCTGGATGTGCAAGTATGAATGGTTCAGCAGCTGGTGAAAAGATGTCCGAGGAGTACAATGAGAATACATTCATCCTTTCGTTAAAGACAATGGTGTACACCATGAGGAAACCTCCAAAGCATTTTGAGGATCTTGTCCTGGGCCATTTCTACAATCGTGCTCGTGACATTCTGGTGGCATGCAAAGCATATATGGATGGTGCTCAAGTGGGGTGTCTGGTCAAAGGTGGTGTTCAAGATGTTGATGAGGGTGACAAGAGCTGCTCACAGCGGTTCAAGAGTTCTGTTGCCGACCATCTGCCTATGCTCGTCGCAGAGTTTACAAGAATCGGGGTCAAGGATTGTGAGAGATTCGTATCACCAGCAACATCTGAGAACAACCAAACTGCGAGCATGCCTCAGGCTGCAACATCAATGATTTCATGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019899 GO:0031625 GO:0032446 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044389 GO:0044424 GO:0044464 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

UQ_con

Protein Analysis

690

Amino Acids

75.96

Weight (kDa)

5.53

Isoelectric Point (pI)

41.78

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004980)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G15355
fragaria_vesca	FvH4_3g20000 FvH4_3g20000 FvH4_3g20000 FvH4_3g20000 FvH4_3g20000 FvH4_3g20000 FvH4_3g20000
malus_domestica	MD03G1227200.v1.1 MD11G1246700.v1.1
prunus_persica	Prupe.4G181600_v2.0.a1 Prupe.4G181600_v2.0.a1 Prupe.4G181600_v2.0.a1
pyrus_communis	pycom03g17490 pycom11g21880
rosa_chinensis	RchiOBHm_Chr5g0033831
rosa_laevigata	RLG00000033504
rosa_multiflora	Rmu_co8216886.1_g000001 Rmu_co8329207.1_g000001 Rmu_sc0001768.1_g000061 Rmu_sc0008210.1_g000001
rosa_roxburghii	Rroxscaffold_1G00046350
rosa_rugosa	Rorug05G0142600 Rorug05G0142700.1 Rorug05G0142800
rosa_samantha	Rh5AG233600 Rh5BG234100 Rh5CG264200 Rh5DG240900
rosa_wichuraiana	Rw5G021560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	18
Acc16I	TGCGCA	1 cut(s)	1074
Acc36I	ACCTGC	2 cut(s)	727, 1040
AccB1I	GGYRCC	1 cut(s)	481
AccB7I	CCANNNNNTGG	1 cut(s)	605
AccII	CGCG	1 cut(s)	1225
AciI	CCGC	3 cut(s)	29, 1373, 1912
AclWI	GGATC	8 cut(s)	122, 149, 497, 510, 1007, 1282, 1353, 1779
AcoI	YGGCCR	1 cut(s)	959
AcsI	RAATTY	6 cut(s)	62, 977, 1077, 1128, 1269, 1489
AcuI	CTGAAG	2 cut(s)	678, 1181
AcyI	GRCGYC	1 cut(s)	15
AfaI	GTAC	7 cut(s)	643, 893, 1381, 1443, 1496, 1697, 1739
AfiI	CCNNNNNNNGG	5 cut(s)	605, 953, 954, 1297, 1539
AflIII	ACRYGT	1 cut(s)	1223
Alw21I	GWGCWC	3 cut(s)	745, 1804, 1846
Alw26I	GTCTC	3 cut(s)	1328, 1403, 1600
AlwI	GGATC	8 cut(s)	122, 149, 497, 510, 1007, 1282, 1353, 1779
AlwNI	CAGNNNCTG	4 cut(s)	137, 578, 1118, 1673
Ama87I	CYCGRG	2 cut(s)	51, 1564
AoxI	GGCC	7 cut(s)	54, 262, 959, 965, 1114, 1471, 1783
ApaI	GGGCCC	2 cut(s)	58, 969
ApeKI	GCWGC	6 cut(s)	137, 308, 1243, 1670, 1902, 2045
ApoI	RAATTY	6 cut(s)	62, 977, 1077, 1128, 1269, 1489
Asp700I	GAANNNNTTC	3 cut(s)	196, 541, 1709
AspLEI	GCGC	1 cut(s)	1075
AspS9I	GGNCC	7 cut(s)	54, 55, 263, 965, 966, 1115, 1783
AsuC2I	CCSGG	5 cut(s)	52, 53, 963, 1565, 1566
AsuHPI	GGTGA	3 cut(s)	1688, 1904, 1992
AvaI	CYCGRG	2 cut(s)	51, 1564
AxyI	CCTNAGG	1 cut(s)	2040
BaeGI	GKGCMC	2 cut(s)	58, 969
BamHI	GGATCC	1 cut(s)	502
BanI	GGYRCC	1 cut(s)	481
BanII	GRGCYC	2 cut(s)	58, 969
BauI	CACGAG	1 cut(s)	1803
BbsI	GAAGAC	1 cut(s)	632
Bbv12I	GWGCWC	3 cut(s)	745, 1804, 1846
BbvCI	CCTCAGC	2 cut(s)	243, 1517
BbvI	GCAGC	6 cut(s)	124, 295, 1255, 1682, 1889, 2032
BccI	CCATC	6 cut(s)	197, 341, 1218, 1388, 1832, 1944
BcgI	CGANNNNNNTGC	2 cut(s)	410, 444
BclI	TGATCA	3 cut(s)	214, 336, 580
BcnI	CCSGG	5 cut(s)	52, 53, 963, 1565, 1566
BcoDI	GTCTC	3 cut(s)	1328, 1403, 1600
BfaI	CTAG	1 cut(s)	908
BfuAI	ACCTGC	2 cut(s)	727, 1040
BisI	GCNGC	6 cut(s)	138, 309, 1244, 1671, 1903, 2046
BlsI	GCNGC	6 cut(s)	139, 310, 1245, 1672, 1904, 2047
BmcAI	AGTACT	1 cut(s)	643
BmeT110I	CYCGRG	2 cut(s)	51, 1564
BmgT120I	GGNCC	7 cut(s)	54, 55, 263, 965, 966, 1115, 1783
BmiI	GGNNCC	8 cut(s)	56, 57, 483, 504, 865, 966, 967, 1562
BmrI	ACTGGG	2 cut(s)	749, 1419
BmsI	GCATC	2 cut(s)	838, 896
BmuI	ACTGGG	2 cut(s)	749, 1419
BpiI	GAAGAC	1 cut(s)	632
BplI	GAGNNNNNCTC	4 cut(s)	1738, 1770, 2023, 2055
BpmI	CTGGAG	3 cut(s)	782, 1080, 1313
Bpu10I	CCTNAGC	2 cut(s)	243, 1517
BpuEI	CTTGAG	1 cut(s)	1830
BpuMI	CCSGG	5 cut(s)	52, 53, 963, 1565, 1566
Bsa29I	ATCGAT	1 cut(s)	150
BsaBI	GATNNNNATC	2 cut(s)	126, 1996
BsaHI	GRCGYC	1 cut(s)	15
BsaI	GGTCTC	2 cut(s)	1403, 1600
Bsc4I	CCNNNNNNNGG	5 cut(s)	605, 953, 954, 1297, 1539
Bse1I	ACTGG	4 cut(s)	131, 158, 755, 1425
Bse21I	CCTNAGG	1 cut(s)	2040
Bse3DI	GCAATG	2 cut(s)	147, 858
Bse8I	GATNNNNATC	2 cut(s)	126, 1996
BseCI	ATCGAT	1 cut(s)	150
BseGI	GGATG	5 cut(s)	421, 1153, 1652, 1713, 1843
BseJI	GATNNNNATC	2 cut(s)	126, 1996
BseLI	CCNNNNNNNGG	5 cut(s)	605, 953, 954, 1297, 1539
BseMI	GCAATG	2 cut(s)	147, 858
BseMII	CTCAG	4 cut(s)	234, 1531, 2004, 2054
BseNI	ACTGG	4 cut(s)	131, 158, 755, 1425
BseRI	GAGGAG	1 cut(s)	1706
BseSI	GKGCMC	2 cut(s)	58, 969
BseXI	GCAGC	6 cut(s)	124, 295, 1255, 1682, 1889, 2032
BseYI	CCCAGC	1 cut(s)	325
Bsh1236I	CGCG	1 cut(s)	1225
BshFI	GGCC	7 cut(s)	56, 264, 961, 967, 1116, 1473, 1785
BshNI	GGYRCC	1 cut(s)	481
BshVI	ATCGAT	1 cut(s)	150
BsiHKAI	GWGCWC	3 cut(s)	745, 1804, 1846
BsiHKCI	CYCGRG	2 cut(s)	51, 1564
BsiSI	CCGG	4 cut(s)	35, 52, 962, 1565
BslFI	GGGAC	1 cut(s)	308
BslI	CCNNNNNNNGG	5 cut(s)	605, 953, 954, 1297, 1539
BsmAI	GTCTC	3 cut(s)	1328, 1403, 1600
BsmFI	GGGAC	1 cut(s)	308
BsnI	GGCC	7 cut(s)	56, 264, 961, 967, 1116, 1473, 1785
Bso31I	GGTCTC	2 cut(s)	1403, 1600
BsoBI	CYCGRG	2 cut(s)	51, 1564
Bsp120I	GGGCCC	2 cut(s)	54, 965
Bsp1286I	GDGCHC	5 cut(s)	58, 745, 969, 1804, 1846
Bsp1407I	TGTACA	2 cut(s)	1494, 1737
Bsp19I	CCATGG	1 cut(s)	1137
BspACI	CCGC	3 cut(s)	29, 1373, 1912
BspANI	GGCC	7 cut(s)	56, 264, 961, 967, 1116, 1473, 1785
BspCNI	CTCAG	4 cut(s)	235, 1530, 2005, 2053
BspDI	ATCGAT	1 cut(s)	150
BspFNI	CGCG	1 cut(s)	1225
BspLI	GGNNCC	8 cut(s)	56, 57, 483, 504, 865, 966, 967, 1562
BspMI	ACCTGC	2 cut(s)	727, 1040
BspPI	GGATC	8 cut(s)	122, 149, 497, 510, 1007, 1282, 1353, 1779
BspQI	GCTCTTC	1 cut(s)	202
BspT107I	GGYRCC	1 cut(s)	481
BspTNI	GGTCTC	2 cut(s)	1403, 1600
BsrDI	GCAATG	2 cut(s)	147, 858
BsrGI	TGTACA	2 cut(s)	1494, 1737
BsrI	ACTGG	4 cut(s)	131, 158, 755, 1425
BssNI	GRCGYC	1 cut(s)	15
BssSI	CACGAG	1 cut(s)	1803
BssT1I	CCWWGG	3 cut(s)	491, 1058, 1137
Bst2BI	CACGAG	1 cut(s)	1803
Bst4CI	ACNGT	1 cut(s)	1192
Bst6I	CTCTTC	3 cut(s)	202, 1272, 1406
BstACI	GRCGYC	1 cut(s)	15
BstAUI	TGTACA	2 cut(s)	1494, 1737
BstC8I	GCNNGC	5 cut(s)	441, 816, 1822, 2032, 2036
BstDEI	CTNAG	6 cut(s)	243, 312, 343, 1517, 2013, 2040
BstDSI	CCRYGG	1 cut(s)	1137
BstENI	CCTNNNNNAGG	1 cut(s)	1295
BstF5I	GGATG	5 cut(s)	421, 1153, 1652, 1713, 1843
BstFNI	CGCG	1 cut(s)	1225
BstHHI	GCGC	1 cut(s)	1075
BstMAI	GTCTC	3 cut(s)	1328, 1403, 1600
BstMWI	GCNNNNNNNGC	3 cut(s)	261, 574, 1826
BstNSI	RCATGY	2 cut(s)	1824, 2038
BstSLI	GKGCMC	2 cut(s)	58, 969
BstUI	CGCG	1 cut(s)	1225
BstV1I	GCAGC	6 cut(s)	124, 295, 1255, 1682, 1889, 2032
BstV2I	GAAGAC	1 cut(s)	632
BstX2I	RGATCY	5 cut(s)	127, 502, 1287, 1345, 1771
BstXI	CCANNNNNNTGG	3 cut(s)	1144, 1257, 1469
BstYI	RGATCY	5 cut(s)	127, 502, 1287, 1345, 1771
Bsu15I	ATCGAT	1 cut(s)	150
Bsu36I	CCTNAGG	1 cut(s)	2040
BsuRI	GGCC	7 cut(s)	56, 264, 961, 967, 1116, 1473, 1785
BsuTUI	ATCGAT	1 cut(s)	150
BtgI	CCRYGG	1 cut(s)	1137
BtsCI	GGATG	5 cut(s)	421, 1153, 1652, 1713, 1843
BtsIMutI	CAGTG	1 cut(s)	1432
BveI	ACCTGC	2 cut(s)	727, 1040
Cac8I	GCNNGC	5 cut(s)	441, 816, 1822, 2032, 2036
CaiI	CAGNNNCTG	4 cut(s)	137, 578, 1118, 1673
CfoI	GCGC	1 cut(s)	1075
Cfr13I	GGNCC	7 cut(s)	54, 55, 263, 965, 966, 1115, 1783
Cfr9I	CCCGGG	2 cut(s)	51, 1564
ClaI	ATCGAT	1 cut(s)	150
CsiI	ACCWGGT	1 cut(s)	1532
Csp6I	GTAC	7 cut(s)	642, 892, 1380, 1442, 1495, 1696, 1738
CviQI	GTAC	7 cut(s)	642, 892, 1380, 1442, 1495, 1696, 1738
DdeI	CTNAG	6 cut(s)	243, 312, 343, 1517, 2013, 2040
DraI	TTTAAA	2 cut(s)	511, 937
EaeI	YGGCCR	1 cut(s)	959
Eam1104I	CTCTTC	3 cut(s)	202, 1272, 1406
EarI	CTCTTC	3 cut(s)	202, 1272, 1406
EciI	GGCGGA	2 cut(s)	18, 1388
Eco130I	CCWWGG	3 cut(s)	491, 1058, 1137
Eco24I	GRGCYC	2 cut(s)	58, 969
Eco31I	GGTCTC	2 cut(s)	1403, 1600
Eco57I	CTGAAG	2 cut(s)	678, 1181
Eco81I	CCTNAGG	1 cut(s)	2040
Eco88I	CYCGRG	2 cut(s)	51, 1564
EcoNI	CCTNNNNNAGG	1 cut(s)	1295
EcoO109I	RGGNCCY	3 cut(s)	55, 965, 1115
EcoRI	GAATTC	1 cut(s)	1269
EcoT14I	CCWWGG	3 cut(s)	491, 1058, 1137
EcoT38I	GRGCYC	2 cut(s)	58, 969
ErhI	CCWWGG	3 cut(s)	491, 1058, 1137
FalI	AAGNNNNNCTT	6 cut(s)	75, 107, 916, 948, 1616, 1648
FaqI	GGGAC	1 cut(s)	308
FauNDI	CATATG	1 cut(s)	370
FbaI	TGATCA	3 cut(s)	214, 336, 580
Fnu4HI	GCNGC	6 cut(s)	138, 309, 1244, 1671, 1903, 2046
FokI	GGATG	5 cut(s)	428, 1160, 1659, 1700, 1850
FriOI	GRGCYC	2 cut(s)	58, 969
Fsp4HI	GCNGC	6 cut(s)	138, 309, 1244, 1671, 1903, 2046
FspBI	CTAG	1 cut(s)	908
FspI	TGCGCA	1 cut(s)	1074
GlaI	GCGC	1 cut(s)	1074
GluI	GCNGC	6 cut(s)	138, 309, 1244, 1671, 1903, 2046
GsaI	CCCAGC	1 cut(s)	329
GsuI	CTGGAG	3 cut(s)	782, 1080, 1313
HaeIII	GGCC	7 cut(s)	56, 264, 961, 967, 1116, 1473, 1785
HapII	CCGG	4 cut(s)	35, 52, 962, 1565
HhaI	GCGC	1 cut(s)	1075
Hin1I	GRCGYC	1 cut(s)	15
Hin6I	GCGC	1 cut(s)	1073
HinP1I	GCGC	1 cut(s)	1073
HincII	GTYRAC	1 cut(s)	1575
HindII	GTYRAC	1 cut(s)	1575
HindIII	AAGCTT	3 cut(s)	619, 857, 1003
HinfI	GANTC	9 cut(s)	5, 25, 664, 767, 795, 838, 1063, 1968, 1992
HpaII	CCGG	4 cut(s)	35, 52, 962, 1565
HphI	GGTGA	3 cut(s)	1688, 1904, 1992
Hpy166II	GTNNAC	5 cut(s)	1456, 1575, 1738, 1740, 1962
Hpy8I	GTNNAC	5 cut(s)	1456, 1575, 1738, 1740, 1962
Hpy99I	CGWCG	2 cut(s)	20, 1955
HpyAV	CCTTC	4 cut(s)	175, 1291, 1484, 1532
HpyCH4III	ACNGT	1 cut(s)	1192
HpyCH4IV	ACGT	3 cut(s)	15, 333, 557
HpyCH4V	TGCA	9 cut(s)	140, 439, 568, 727, 851, 887, 1652, 1824, 2048
HpyF10VI	GCNNNNNNNGC	3 cut(s)	261, 574, 1826
HpyF3I	CTNAG	6 cut(s)	243, 312, 343, 1517, 2013, 2040
HpySE526I	ACGT	3 cut(s)	15, 333, 557
Hsp92I	GRCGYC	1 cut(s)	15
HspAI	GCGC	1 cut(s)	1073
Ksp22I	TGATCA	3 cut(s)	214, 336, 580
LguI	GCTCTTC	1 cut(s)	202
LmnI	GCTCC	3 cut(s)	748, 1099, 1566
Lsp1109I	GCAGC	6 cut(s)	124, 295, 1255, 1682, 1889, 2032
LweI	GCATC	2 cut(s)	838, 896
MabI	ACCWGGT	1 cut(s)	1532
MaeI	CTAG	1 cut(s)	908
MaeII	ACGT	3 cut(s)	15, 333, 557
MaeIII	GTNAC	2 cut(s)	1805, 1892
MfeI	CAATTG	2 cut(s)	434, 1498
MflI	RGATCY	5 cut(s)	127, 502, 1287, 1345, 1771
MhlI	GDGCHC	5 cut(s)	58, 745, 969, 1804, 1846
MluI	ACGCGT	1 cut(s)	1223
MlyI	GAGTC	2 cut(s)	776, 789
MmeI	TCCRAC	2 cut(s)	68, 480
MroXI	GAANNNNTTC	3 cut(s)	196, 541, 1709
MseI	TTAA	9 cut(s)	510, 522, 936, 981, 996, 1481, 1527, 1635, 1724
MslI	CAYNNNNRTG	5 cut(s)	676, 846, 1142, 1467, 1814
MspA1I	CMGCKG	2 cut(s)	1673, 1912
MspI	CCGG	4 cut(s)	35, 52, 962, 1565
MunI	CAATTG	2 cut(s)	434, 1498
MvnI	CGCG	1 cut(s)	1225
MwoI	GCNNNNNNNGC	3 cut(s)	261, 574, 1826
NciI	CCSGG	5 cut(s)	52, 53, 963, 1565, 1566
NcoI	CCATGG	1 cut(s)	1137
NdeI	CATATG	1 cut(s)	370
NlaIV	GGNNCC	8 cut(s)	56, 57, 483, 504, 865, 966, 967, 1562
NmuCI	GTSAC	2 cut(s)	1805, 1892
NsbI	TGCGCA	1 cut(s)	1074
NspI	RCATGY	2 cut(s)	1824, 2038
PaeI	GCATGC	2 cut(s)	1824, 2038
PasI	CCCWGGG	2 cut(s)	284, 1118
PciSI	GCTCTTC	1 cut(s)	202
PdmI	GAANNNNTTC	3 cut(s)	196, 541, 1709
PfeI	GAWTC	7 cut(s)	5, 25, 664, 838, 1063, 1968, 1992
PflMI	CCANNNNNTGG	1 cut(s)	605
PfoI	TCCNGGA	2 cut(s)	1096, 1290
PkrI	GCNGC	6 cut(s)	139, 310, 1245, 1672, 1904, 2047
PleI	GAGTC	2 cut(s)	775, 789
PpsI	GAGTC	2 cut(s)	775, 789
PspFI	CCCAGC	1 cut(s)	325
PspN4I	GGNNCC	8 cut(s)	56, 57, 483, 504, 865, 966, 967, 1562
PspOMI	GGGCCC	2 cut(s)	54, 965
PspPI	GGNCC	7 cut(s)	54, 55, 263, 965, 966, 1115, 1783
PsrI	GAACNNNNNNTAC	2 cut(s)	1648, 1680
PstNI	CAGNNNCTG	4 cut(s)	137, 578, 1118, 1673
PsuI	RGATCY	5 cut(s)	127, 502, 1287, 1345, 1771
PvuII	CAGCTG	1 cut(s)	1673
RsaI	GTAC	7 cut(s)	643, 893, 1381, 1443, 1496, 1697, 1739
RsaNI	GTAC	7 cut(s)	642, 892, 1380, 1442, 1495, 1696, 1738
RseI	CAYNNNNRTG	5 cut(s)	676, 846, 1142, 1467, 1814
SapI	GCTCTTC	1 cut(s)	202
SaqAI	TTAA	9 cut(s)	510, 522, 936, 981, 996, 1481, 1527, 1635, 1724
SatI	GCNGC	6 cut(s)	138, 309, 1244, 1671, 1903, 2046
Sau96I	GGNCC	7 cut(s)	54, 55, 263, 965, 966, 1115, 1783
ScaI	AGTACT	1 cut(s)	643
SchI	GAGTC	2 cut(s)	776, 789
SduI	GDGCHC	5 cut(s)	58, 745, 969, 1804, 1846
SexAI	ACCWGGT	1 cut(s)	1532
SfaNI	GCATC	2 cut(s)	838, 896
SmaI	CCCGGG	2 cut(s)	53, 1566
SmiMI	CAYNNNNRTG	5 cut(s)	676, 846, 1142, 1467, 1814
SmlI	CTYRAG	1 cut(s)	1845
SmoI	CTYRAG	1 cut(s)	1845
SphI	GCATGC	2 cut(s)	1824, 2038
SsiI	CCGC	3 cut(s)	29, 1373, 1912
SspI	AATATT	1 cut(s)	1317
SspMI	CTAG	1 cut(s)	908
StyI	CCWWGG	3 cut(s)	491, 1058, 1137
TaaI	ACNGT	1 cut(s)	1192
TaiI	ACGT	3 cut(s)	18, 336, 560
TaqI	TCGA	5 cut(s)	150, 420, 549, 824, 1477
TatI	WGTACW	4 cut(s)	641, 1494, 1695, 1737
TfiI	GAWTC	7 cut(s)	5, 25, 664, 838, 1063, 1968, 1992
Tru1I	TTAA	9 cut(s)	510, 522, 936, 981, 996, 1481, 1527, 1635, 1724
Tru9I	TTAA	9 cut(s)	510, 522, 936, 981, 996, 1481, 1527, 1635, 1724
TscAI	CASTG	1 cut(s)	1432
TseFI	GTSAC	2 cut(s)	1805, 1892
TseI	GCWGC	6 cut(s)	137, 308, 1243, 1670, 1902, 2045
Tsp45I	GTSAC	2 cut(s)	1805, 1892
TspDTI	ATGAA	8 cut(s)	138, 387, 869, 887, 1164, 1673, 1702, 2052
TspMI	CCCGGG	2 cut(s)	51, 1564
TspRI	CASTG	1 cut(s)	1432
Van91I	CCANNNNNTGG	1 cut(s)	605
XagI	CCTNNNNNAGG	1 cut(s)	1295
XapI	RAATTY	6 cut(s)	62, 977, 1077, 1128, 1269, 1489
XbaI	TCTAGA	1 cut(s)	907
XceI	RCATGY	2 cut(s)	1824, 2038
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1254
XmaI	CCCGGG	2 cut(s)	51, 1564
XmnI	GAANNNNTTC	3 cut(s)	196, 541, 1709
XspI	CTAG	1 cut(s)	908
ZraI	GACGTC	1 cut(s)	16
ZrmI	AGTACT	1 cut(s)	643

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.