Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0004980

Physical Location & Seq

Genomic Coordinates Forward (+)

28212397 .. 28217405

Gene Structure 5009 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000033504

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2097 bp

ATGGATACCGACGACGTTGTCGAGGTCGCCGCTCCTGTTTCTTGCTCTCGGAAATTGCGAAAGAACAAGGAGGTGAATTTGCAGGATGTGATTGAAATTGACAAAGATGATTCTGCTGCTGTAATGTTTATCTATGAGAAAATTGACAGAAGTATCAAAGGAAAGGCAGTGGAAAATTCTTCAGATGGTTACCATATTCATCAATCAAAGGAAGCTGTCCTCCATACTTCTGTTGGTTCTTCTGGTATGGAAACCCTTGGCTCAGTCAATGGAATTGAAATTGCTAAGGATGTCGCCCCAGCATCAAATCACTTTATTGACTTAGACTGTCCCAATTCTGATGCATCTGCTGACGATGTTGATGACTGTACTGATACTTGTTTTGAAGAGTTTGATTATGCCTTCTTGCAATCCCATTTCGATAATGTGGGTATTCCTCCTGGAGTAGAGGCGCCTGTCCCTCATATTCCTTGGTTGTCAGATCCTCCTAAAAGTAATGTAAGTTCAGTTTCTGGAAGTAGTTCTGTTGATACAAGGTGTCAAATGAAATCAGATTATGTTGGCCTCCATGGAAATGAGCTGTTTCCCTGGACAGATCCTCCCAGTTTCAACTTTAAGCCAACCGTTGTGGGTAGTTCAAGCTTGAAGACCCAAACAGACAGTATCGGTCACCCAAATGGACAGTATCAATCATCTTGGAAACTTCCAAAAGCTGCTAGAAGCAGAAAGAAACAATCTGCTTCACATCCCCAAGTTAGTGCTCCTAGTCTCCCAGTTGGAGCAGAACCATCAAAATCTCAAAGGCTCTTAGGAGCTTTGCAGCGTAAAAAGAAGCTATTTTCTTCAAGTAGTTCGACTAATTATGATGCAATGAAGTTCGATACTGGAGCTGACTCAGCCGAGACATCTATTTTTGGACATAATTTACCCTACAGTCCAATTTATCCTTATGGATTACAGTCACCCTGGTTGTCAGATTCTTTGTCAGCAATTAGTGGTAAACCAAATCATTCAAGTTTCTACGGTCCAGTTGGTTCCATATACCCTCCTGGAGAGTTAGCAGGTATCCCTTGGGTTAAGGGTGTTTCCCAACCTCAACACAATGTCACAGCTGCAAGCCTTTCAACAACCCCTGCTAGACAATTGTCTAGCAAGGAAATAGATGAAATTATGCAGAAGTACAAGGGTTTTAAACAATTTGATACAGTTGAAGATCATTCAGACCATCACTATATACTCTCTGGTACACTCAACGGTAATTCAATGACTCAGCTACCAAAGAACTGGGCAAAGAGAATTCAGGAAGAGTGGAAGAGCCTGGAGAAAGATTTGCCTGACACAGTATTTGTTAGAGTCTACGAGAAAAGGATGGATCTTTTGAGAGCTGTAATTGTTGGAGCTGAGGGTACTCCTTACCATGATGGTCTCTTTTTCTTTGATGTTTCCTTTCCCAGTGGTTACCCCAATGTGCCACCGCATGTCCACTACCACTCGGGTGGCCTTCGACTAAATCCAAATTTGTATGGTTGTGGAAAAGTATGCCTCAGCCTTCTCAACACCTGGTCTGGGAACTCGAAAGAGATGTGGATCCCAGGAATGTCCACCATTCTACAAGTTTTAGTGTCCATACAAGGGCTGATCTTGAATACAAAGCCCTACTTTAATGAGCCTGGATATGCATCTATGAATGGTTCAGCAGCTGGTGAAACAAGGTCCCGGCAGTATAATGAGGATACCTTCCTCCTATCTTTAACAACGATGGTATACATGATGAGGAGGCCTCCGAAGCATTTTGAGGATTTTGTTGTGGGGCATTTCCGGGATCGTGCTCATGACATTCTGGTGGCATGTAAAGCATACATGGATGGTGCTCAAGTGGGATGTCTGGTCAAAGGTGGGGTTCAGGATGTTGATGAGGGTGACAAGAGTTGTTCTCAGCGGTTTAAGGATTCTTTGGCAGGGCACATGCCGATGCTTGTCAAAGAGTTTACGCATATAGGTGTCAAGGATTGCGAGAAATATGTATCAGCAGCTGTAAATGGGAACGAGCAGATTGGTAGTATGCCGCAGGCTGCAACATCAATGGTTTCATGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019899 GO:0031625 GO:0032446 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044389 GO:0044424 GO:0044464 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

UQ_con

Protein Analysis

699

Amino Acids

76.51

Weight (kDa)

5.89

Isoelectric Point (pI)

44.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UQ_con	PF00179	432 - 553	1.1e-21	Ubiquitin-conjugating enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0004980)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G15355
fragaria_vesca	FvH4_3g20000 FvH4_3g20000 FvH4_3g20000 FvH4_3g20000 FvH4_3g20000 FvH4_3g20000 FvH4_3g20000
malus_domestica	MD03G1227200.v1.1 MD11G1246700.v1.1
prunus_persica	Prupe.4G181600_v2.0.a1 Prupe.4G181600_v2.0.a1 Prupe.4G181600_v2.0.a1
pyrus_communis	pycom03g17490 pycom11g21880
rosa_chinensis	RchiOBHm_Chr5g0033831
rosa_laevigata	RLG00000033504
rosa_multiflora	Rmu_co8216886.1_g000001 Rmu_co8329207.1_g000001 Rmu_sc0001768.1_g000061 Rmu_sc0008210.1_g000001
rosa_roxburghii	Rroxscaffold_1G00046350
rosa_rugosa	Rorug05G0142600 Rorug05G0142700.1 Rorug05G0142800
rosa_samantha	Rh5AG233600 Rh5BG234100 Rh5CG264200 Rh5DG240900
rosa_wichuraiana	Rw5G021560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	17
Acc36I	ACCTGC	1 cut(s)	1052
AccB1I	GGYRCC	1 cut(s)	451
AccBSI	CCGCTC	1 cut(s)	32
AccI	GTMKAC	2 cut(s)	1356, 1764
AciI	CCGC	4 cut(s)	30, 1475, 1939, 2066
AclWI	GGATC	6 cut(s)	476, 590, 1380, 1582, 1595, 1830
AcsI	RAATTY	4 cut(s)	76, 175, 1296, 1516
AcuI	CTGAAG	1 cut(s)	165
AcyI	GRCGYC	1 cut(s)	452
AfaI	GTAC	4 cut(s)	370, 1181, 1246, 1408
AfiI	CCNNNNNNNGG	2 cut(s)	1566, 1632
AjnI	CCWGG	8 cut(s)	439, 587, 965, 1048, 1317, 1559, 1591, 1669
AleI	CACNNNNGTG	1 cut(s)	1494
Alw21I	GWGCWC	3 cut(s)	763, 1831, 1873
Alw26I	GTCTC	3 cut(s)	773, 896, 1430
AlwI	GGATC	6 cut(s)	476, 590, 1380, 1582, 1595, 1830
AlwNI	CAGNNNCTG	3 cut(s)	512, 1700, 2033
Ama87I	CYCGRG	1 cut(s)	1492
AoxI	GGCC	3 cut(s)	562, 1498, 1778
ApeKI	GCWGC	7 cut(s)	116, 713, 820, 1112, 1697, 2030, 2072
ApoI	RAATTY	4 cut(s)	76, 175, 1296, 1516
ArsI	GACNNNNNNTTYG	2 cut(s)	1328, 1360
Asp700I	GAANNNNTTC	1 cut(s)	520
AspLEI	GCGC	1 cut(s)	454
AspS9I	GGNCC	2 cut(s)	1025, 1713
AsuC2I	CCSGG	2 cut(s)	1717, 1820
AsuHPI	GGTGA	5 cut(s)	85, 662, 954, 1715, 1931
AvaI	CYCGRG	1 cut(s)	1492
AvaII	GGWCC	2 cut(s)	1025, 1713
BaeGI	GKGCMC	1 cut(s)	1965
BaeI	ACNNNNGTAYC	2 cut(s)	136, 169
BamHI	GGATCC	1 cut(s)	1587
BanI	GGYRCC	1 cut(s)	451
BbsI	GAAGAC	1 cut(s)	653
Bbv12I	GWGCWC	3 cut(s)	763, 1831, 1873
BbvCI	CCTCAGC	2 cut(s)	1401, 1544
BbvI	GCAGC	7 cut(s)	103, 700, 832, 1099, 1709, 2042, 2059
BccI	CCATC	7 cut(s)	179, 796, 1233, 1363, 1415, 1753, 1859
BciT130I	CCWGG	8 cut(s)	441, 589, 967, 1050, 1319, 1561, 1593, 1671
BciVI	GTATCC	2 cut(s)	1076, 1726
BcnI	CCSGG	2 cut(s)	1717, 1820
BcoDI	GTCTC	3 cut(s)	773, 896, 1430
BfaI	CTAG	4 cut(s)	717, 765, 1137, 1149
BfmI	CTRYAG	1 cut(s)	931
BfoI	RGCGCY	1 cut(s)	455
BfuAI	ACCTGC	1 cut(s)	1052
BfuI	GTATCC	2 cut(s)	1076, 1726
BisI	GCNGC	9 cut(s)	30, 117, 714, 821, 1113, 1698, 2031, 2066, 2073
BlsI	GCNGC	9 cut(s)	31, 118, 715, 822, 1114, 1699, 2032, 2067, 2074
Bme18I	GGWCC	2 cut(s)	1025, 1713
BmeT110I	CYCGRG	1 cut(s)	1492
BmgT120I	GGNCC	2 cut(s)	1025, 1713
BmiI	GGNNCC	4 cut(s)	453, 1036, 1589, 1715
BmrI	ACTGGG	4 cut(s)	597, 767, 1294, 1446
BmsI	GCATC	6 cut(s)	311, 331, 353, 856, 1688, 1962
BmuI	ACTGGG	4 cut(s)	597, 767, 1294, 1446
BoxI	GACNNNNGTC	1 cut(s)	1144
BpiI	GAAGAC	1 cut(s)	653
BplI	GAGNNNNNCTC	4 cut(s)	1765, 1797, 1918, 1950
BpmI	CTGGAG	4 cut(s)	462, 906, 1071, 1340
Bpu10I	CCTNAGC	3 cut(s)	285, 1401, 1544
BpuEI	CTTGAG	1 cut(s)	1857
BpuMI	CCSGG	2 cut(s)	1717, 1820
BsaBI	GATNNNNATC	2 cut(s)	1586, 1678
BsaHI	GRCGYC	1 cut(s)	452
BsaI	GGTCTC	1 cut(s)	1430
BsaJI	CCNNGG	7 cut(s)	256, 470, 568, 587, 965, 1070, 1591
BsaXI	ACNNNNNCTCC	2 cut(s)	583, 613
Bsc4I	CCNNNNNNNGG	2 cut(s)	1566, 1632
Bse1I	ACTGG	6 cut(s)	603, 773, 889, 1028, 1289, 1452
Bse3DI	GCAATG	1 cut(s)	876
Bse8I	GATNNNNATC	2 cut(s)	1586, 1678
BseBI	CCWGG	8 cut(s)	441, 589, 967, 1050, 1319, 1561, 1593, 1671
BseDI	CCNNGG	7 cut(s)	256, 470, 568, 587, 965, 1070, 1591
BseGI	GGATG	7 cut(s)	91, 295, 745, 1374, 1870, 1886, 1912
BseJI	GATNNNNATC	2 cut(s)	1586, 1678
BseLI	CCNNNNNNNGG	2 cut(s)	1566, 1632
BseMI	GCAATG	1 cut(s)	876
BseMII	CTCAG	6 cut(s)	276, 909, 1283, 1392, 1558, 1949
BseNI	ACTGG	6 cut(s)	603, 773, 889, 1028, 1289, 1452
BseRI	GAGGAG	1 cut(s)	1789
BseSI	GKGCMC	1 cut(s)	1965
BseXI	GCAGC	7 cut(s)	103, 700, 832, 1099, 1709, 2042, 2059
BseYI	CCCAGC	1 cut(s)	298
BshFI	GGCC	3 cut(s)	564, 1500, 1780
BshNI	GGYRCC	1 cut(s)	451
BsiHKAI	GWGCWC	3 cut(s)	763, 1831, 1873
BsiHKCI	CYCGRG	1 cut(s)	1492
BsiSI	CCGG	2 cut(s)	1717, 1819
BslFI	GGGAC	3 cut(s)	315, 443, 1699
BslI	CCNNNNNNNGG	2 cut(s)	1566, 1632
BsmAI	GTCTC	3 cut(s)	773, 896, 1430
BsmFI	GGGAC	3 cut(s)	315, 443, 1699
BsnI	GGCC	3 cut(s)	564, 1500, 1780
Bso31I	GGTCTC	1 cut(s)	1430
BsoBI	CYCGRG	1 cut(s)	1492
Bsp1286I	GDGCHC	4 cut(s)	763, 1831, 1873, 1965
Bsp143I	GATC	7 cut(s)	481, 595, 1213, 1372, 1587, 1638, 1822
Bsp19I	CCATGG	1 cut(s)	568
BspACI	CCGC	4 cut(s)	30, 1475, 1939, 2066
BspANI	GGCC	3 cut(s)	564, 1500, 1780
BspCNI	CTCAG	6 cut(s)	275, 908, 1282, 1393, 1557, 1948
BspHI	TCATGA	1 cut(s)	1831
BspLI	GGNNCC	4 cut(s)	453, 1036, 1589, 1715
BspMI	ACCTGC	1 cut(s)	1052
BspPI	GGATC	6 cut(s)	476, 590, 1380, 1582, 1595, 1830
BspQI	GCTCTTC	1 cut(s)	1307
BspT107I	GGYRCC	1 cut(s)	451
BspTNI	GGTCTC	1 cut(s)	1430
BsrBI	CCGCTC	1 cut(s)	32
BsrDI	GCAATG	1 cut(s)	876
BsrI	ACTGG	6 cut(s)	603, 773, 889, 1028, 1289, 1452
BssECI	CCNNGG	7 cut(s)	256, 470, 568, 587, 965, 1070, 1591
BssMI	GATC	7 cut(s)	481, 595, 1213, 1372, 1587, 1638, 1822
BssNAI	GTATAC	1 cut(s)	1765
BssNI	GRCGYC	1 cut(s)	452
BssT1I	CCWWGG	4 cut(s)	256, 470, 568, 1070
Bst1107I	GTATAC	1 cut(s)	1765
Bst2UI	CCWGG	8 cut(s)	441, 589, 967, 1050, 1319, 1561, 1593, 1671
Bst6I	CTCTTC	3 cut(s)	381, 1299, 1307
BstACI	GRCGYC	1 cut(s)	452
BstC8I	GCNNGC	2 cut(s)	1117, 2070
BstDEI	CTNAG	9 cut(s)	262, 285, 322, 808, 895, 1269, 1401, 1544, 1935
BstDSI	CCRYGG	1 cut(s)	568
BstEII	GGTNACC	3 cut(s)	188, 668, 1457
BstF5I	GGATG	7 cut(s)	91, 295, 745, 1374, 1870, 1886, 1912
BstH2I	RGCGCY	1 cut(s)	455
BstHHI	GCGC	1 cut(s)	454
BstKTI	GATC	7 cut(s)	484, 598, 1216, 1375, 1590, 1641, 1825
BstMAI	GTCTC	3 cut(s)	773, 896, 1430
BstMBI	GATC	7 cut(s)	481, 595, 1213, 1372, 1587, 1638, 1822
BstMWI	GCNNNNNNNGC	3 cut(s)	896, 1786, 1853
BstNI	CCWGG	8 cut(s)	441, 589, 967, 1050, 1319, 1561, 1593, 1671
BstNSI	RCATGY	3 cut(s)	1481, 1851, 1969
BstPAI	GACNNNNGTC	1 cut(s)	1144
BstPI	GGTNACC	3 cut(s)	188, 668, 1457
BstSFI	CTRYAG	1 cut(s)	931
BstSLI	GKGCMC	1 cut(s)	1965
BstV1I	GCAGC	7 cut(s)	103, 700, 832, 1099, 1709, 2042, 2059
BstV2I	GAAGAC	1 cut(s)	653
BstX2I	RGATCY	4 cut(s)	481, 595, 1372, 1587
BstXI	CCANNNNNNTGG	2 cut(s)	1284, 1496
BstYI	RGATCY	4 cut(s)	481, 595, 1372, 1587
BstZ17I	GTATAC	1 cut(s)	1765
BsuI	GTATCC	2 cut(s)	1076, 1726
BsuRI	GGCC	3 cut(s)	564, 1500, 1780
BtgI	CCRYGG	1 cut(s)	568
BtsCI	GGATG	7 cut(s)	91, 295, 745, 1374, 1870, 1886, 1912
BtsI	GCAGTG	1 cut(s)	174
BtsIMutI	CAGTG	2 cut(s)	174, 1459
BveI	ACCTGC	1 cut(s)	1052
Cac8I	GCNNGC	2 cut(s)	1117, 2070
CaiI	CAGNNNCTG	3 cut(s)	512, 1700, 2033
CciI	TCATGA	1 cut(s)	1831
CfoI	GCGC	1 cut(s)	454
Cfr13I	GGNCC	2 cut(s)	1025, 1713
CsiI	ACCWGGT	1 cut(s)	1559
Csp6I	GTAC	4 cut(s)	369, 1180, 1245, 1407
CspCI	CAANNNNNGTGG	2 cut(s)	609, 644
CviAII	CATG	9 cut(s)	569, 1418, 1478, 1768, 1832, 1848, 1861, 1966, 2091
CviQI	GTAC	4 cut(s)	369, 1180, 1245, 1407
DdeI	CTNAG	9 cut(s)	262, 285, 322, 808, 895, 1269, 1401, 1544, 1935
DinI	GGCGCC	1 cut(s)	453
DpnI	GATC	7 cut(s)	483, 597, 1215, 1374, 1589, 1640, 1824
DpnII	GATC	7 cut(s)	481, 595, 1213, 1372, 1587, 1638, 1822
DraI	TTTAAA	1 cut(s)	1192
DrdI	GACNNNNNNGTC	1 cut(s)	17
DseDI	GACNNNNNNGTC	1 cut(s)	17
Eam1104I	CTCTTC	3 cut(s)	381, 1299, 1307
EarI	CTCTTC	3 cut(s)	381, 1299, 1307
Eco130I	CCWWGG	4 cut(s)	256, 470, 568, 1070
Eco147I	AGGCCT	1 cut(s)	1780
Eco31I	GGTCTC	1 cut(s)	1430
Eco47I	GGWCC	2 cut(s)	1025, 1713
Eco57I	CTGAAG	1 cut(s)	165
Eco88I	CYCGRG	1 cut(s)	1492
Eco91I	GGTNACC	3 cut(s)	188, 668, 1457
EcoO109I	RGGNCCY	1 cut(s)	1713
EcoO65I	GGTNACC	3 cut(s)	188, 668, 1457
EcoRI	GAATTC	1 cut(s)	1296
EcoRII	CCWGG	8 cut(s)	439, 587, 965, 1048, 1317, 1559, 1591, 1669
EcoT14I	CCWWGG	4 cut(s)	256, 470, 568, 1070
EcoT22I	ATGCAT	2 cut(s)	346, 1681
EgeI	GGCGCC	1 cut(s)	453
EheI	GGCGCC	1 cut(s)	453
ErhI	CCWWGG	4 cut(s)	256, 470, 568, 1070
FaeI	CATG	9 cut(s)	572, 1421, 1481, 1771, 1835, 1851, 1864, 1969, 2094
FalI	AAGNNNNNCTT	2 cut(s)	1643, 1675
FaqI	GGGAC	3 cut(s)	315, 443, 1699
FatI	CATG	9 cut(s)	568, 1417, 1477, 1767, 1831, 1847, 1860, 1965, 2090
FblI	GTMKAC	2 cut(s)	1356, 1764
Fnu4HI	GCNGC	9 cut(s)	30, 117, 714, 821, 1113, 1698, 2031, 2066, 2073
FokI	GGATG	7 cut(s)	98, 302, 732, 1381, 1877, 1893, 1919
Fsp4HI	GCNGC	9 cut(s)	30, 117, 714, 821, 1113, 1698, 2031, 2066, 2073
FspBI	CTAG	4 cut(s)	717, 765, 1137, 1149
GlaI	GCGC	1 cut(s)	453
GluI	GCNGC	9 cut(s)	30, 117, 714, 821, 1113, 1698, 2031, 2066, 2073
GsaI	CCCAGC	1 cut(s)	302
GsuI	CTGGAG	4 cut(s)	462, 906, 1071, 1340
HaeII	RGCGCY	1 cut(s)	455
HaeIII	GGCC	3 cut(s)	564, 1500, 1780
HapII	CCGG	2 cut(s)	1717, 1819
HhaI	GCGC	1 cut(s)	454
Hin1I	GRCGYC	1 cut(s)	452
Hin1II	CATG	9 cut(s)	572, 1421, 1481, 1771, 1835, 1851, 1864, 1969, 2094
Hin6I	GCGC	1 cut(s)	452
HinP1I	GCGC	1 cut(s)	452
HindIII	AAGCTT	1 cut(s)	640
HinfI	GANTC	6 cut(s)	110, 893, 977, 1267, 1353, 1949
HpaII	CCGG	2 cut(s)	1717, 1819
HphI	GGTGA	5 cut(s)	85, 662, 954, 1715, 1931
Hpy166II	GTNNAC	7 cut(s)	1001, 1247, 1357, 1483, 1602, 1765, 1989
Hpy188I	TCNGA	8 cut(s)	51, 184, 340, 481, 553, 976, 1222, 1785
Hpy188III	TCNNGA	5 cut(s)	513, 1301, 1642, 1832, 1904
Hpy8I	GTNNAC	7 cut(s)	1001, 1247, 1357, 1483, 1602, 1765, 1989
Hpy99I	CGWCG	2 cut(s)	14, 17
HpyAV	CCTTC	4 cut(s)	412, 1511, 1559, 1747
HpyCH4IV	ACGT	1 cut(s)	15
HpyCH4V	TGCA	9 cut(s)	82, 344, 409, 820, 869, 1115, 1174, 1679, 2075
HpyF10VI	GCNNNNNNNGC	3 cut(s)	896, 1786, 1853
HpyF3I	CTNAG	9 cut(s)	262, 285, 322, 808, 895, 1269, 1401, 1544, 1935
HpySE526I	ACGT	1 cut(s)	15
Hsp92I	GRCGYC	1 cut(s)	452
Hsp92II	CATG	9 cut(s)	572, 1421, 1481, 1771, 1835, 1851, 1864, 1969, 2094
HspAI	GCGC	1 cut(s)	452
KasI	GGCGCC	1 cut(s)	451
Kzo9I	GATC	7 cut(s)	481, 595, 1213, 1372, 1587, 1638, 1822
LguI	GCTCTTC	1 cut(s)	1307
LmnI	GCTCC	6 cut(s)	37, 766, 779, 812, 887, 1397
Lsp1109I	GCAGC	7 cut(s)	103, 700, 832, 1099, 1709, 2042, 2059
LweI	GCATC	6 cut(s)	311, 331, 353, 856, 1688, 1962
MabI	ACCWGGT	1 cut(s)	1559
MaeI	CTAG	4 cut(s)	717, 765, 1137, 1149
MaeII	ACGT	1 cut(s)	15
MaeIII	GTNAC	6 cut(s)	188, 668, 960, 1105, 1457, 1919
MalI	GATC	7 cut(s)	483, 597, 1215, 1374, 1589, 1640, 1824
MbiI	CCGCTC	1 cut(s)	32
MboI	GATC	7 cut(s)	481, 595, 1213, 1372, 1587, 1638, 1822
MboII	GAAGA	8 cut(s)	171, 231, 398, 658, 834, 1223, 1316, 1324
MfeI	CAATTG	1 cut(s)	1142
MflI	RGATCY	4 cut(s)	481, 595, 1372, 1587
MhlI	GDGCHC	4 cut(s)	763, 1831, 1873, 1965
Mly113I	GGCGCC	1 cut(s)	452
MlyI	GAGTC	3 cut(s)	887, 1261, 1362
MmeI	TCCRAC	2 cut(s)	757, 1375
Mph1103I	ATGCAT	2 cut(s)	346, 1681
MroXI	GAANNNNTTC	1 cut(s)	520
MseI	TTAA	6 cut(s)	615, 1077, 1191, 1662, 1751, 1944
MslI	CAYNNNNRTG	6 cut(s)	573, 675, 1494, 1841, 1970, 1998
MspA1I	CMGCKG	4 cut(s)	1112, 1700, 1939, 2033
MspI	CCGG	2 cut(s)	1717, 1819
MunI	CAATTG	1 cut(s)	1142
MvaI	CCWGG	8 cut(s)	441, 589, 967, 1050, 1319, 1561, 1593, 1671
MwoI	GCNNNNNNNGC	3 cut(s)	896, 1786, 1853
NarI	GGCGCC	1 cut(s)	452
NciI	CCSGG	2 cut(s)	1717, 1820
NcoI	CCATGG	1 cut(s)	568
NdeII	GATC	7 cut(s)	481, 595, 1213, 1372, 1587, 1638, 1822
NlaIII	CATG	9 cut(s)	572, 1421, 1481, 1771, 1835, 1851, 1864, 1969, 2094
NlaIV	GGNNCC	4 cut(s)	453, 1036, 1589, 1715
NmeAIII	GCCGAG	1 cut(s)	925
NmuCI	GTSAC	4 cut(s)	668, 960, 1105, 1919
NsiI	ATGCAT	2 cut(s)	346, 1681
NspI	RCATGY	3 cut(s)	1481, 1851, 1969
OliI	CACNNNNGTG	1 cut(s)	1494
PagI	TCATGA	1 cut(s)	1831
PceI	AGGCCT	1 cut(s)	1780
PciSI	GCTCTTC	1 cut(s)	1307
PcsI	WCGNNNNNNNCGW	2 cut(s)	18, 55
PdmI	GAANNNNTTC	1 cut(s)	520
PfeI	GAWTC	3 cut(s)	110, 977, 1949
PflFI	GACNNNGTC	1 cut(s)	17
PfoI	TCCNGGA	3 cut(s)	439, 1048, 1818
PkrI	GCNGC	9 cut(s)	31, 118, 715, 822, 1114, 1699, 2032, 2067, 2074
PleI	GAGTC	3 cut(s)	887, 1261, 1361
PluTI	GGCGCC	1 cut(s)	455
PpsI	GAGTC	3 cut(s)	887, 1261, 1361
PpuMI	RGGWCCY	1 cut(s)	1713
PshAI	GACNNNNGTC	1 cut(s)	1144
Psp5II	RGGWCCY	1 cut(s)	1713
Psp6I	CCWGG	8 cut(s)	439, 587, 965, 1048, 1317, 1559, 1591, 1669
PspEI	GGTNACC	3 cut(s)	188, 668, 1457
PspFI	CCCAGC	1 cut(s)	298
PspGI	CCWGG	8 cut(s)	439, 587, 965, 1048, 1317, 1559, 1591, 1669
PspN4I	GGNNCC	4 cut(s)	453, 1036, 1589, 1715
PspPI	GGNCC	2 cut(s)	1025, 1713
PspPPI	RGGWCCY	1 cut(s)	1713
PsrI	GAACNNNNNNTAC	2 cut(s)	487, 519
PstNI	CAGNNNCTG	3 cut(s)	512, 1700, 2033
PsuI	RGATCY	4 cut(s)	481, 595, 1372, 1587
PsyI	GACNNNGTC	1 cut(s)	17
PvuII	CAGCTG	3 cut(s)	1112, 1700, 2033
RsaI	GTAC	4 cut(s)	370, 1181, 1246, 1408
RsaNI	GTAC	4 cut(s)	369, 1180, 1245, 1407
RseI	CAYNNNNRTG	6 cut(s)	573, 675, 1494, 1841, 1970, 1998
SapI	GCTCTTC	1 cut(s)	1307
SaqAI	TTAA	6 cut(s)	615, 1077, 1191, 1662, 1751, 1944
SatI	GCNGC	9 cut(s)	30, 117, 714, 821, 1113, 1698, 2031, 2066, 2073
Sau3AI	GATC	7 cut(s)	481, 595, 1213, 1372, 1587, 1638, 1822
Sau96I	GGNCC	2 cut(s)	1025, 1713
SchI	GAGTC	3 cut(s)	887, 1261, 1362
SduI	GDGCHC	4 cut(s)	763, 1831, 1873, 1965
SexAI	ACCWGGT	1 cut(s)	1559
SfaNI	GCATC	6 cut(s)	311, 331, 353, 856, 1688, 1962
SfcI	CTRYAG	1 cut(s)	931
SfoI	GGCGCC	1 cut(s)	453
SinI	GGWCC	2 cut(s)	1025, 1713
SmiMI	CAYNNNNRTG	6 cut(s)	573, 675, 1494, 1841, 1970, 1998
SmlI	CTYRAG	1 cut(s)	1872
SmoI	CTYRAG	1 cut(s)	1872
SseBI	AGGCCT	1 cut(s)	1780
SsiI	CCGC	4 cut(s)	30, 1475, 1939, 2066
SspDI	GGCGCC	1 cut(s)	451
SspMI	CTAG	4 cut(s)	717, 765, 1137, 1149
StuI	AGGCCT	1 cut(s)	1780
StyI	CCWWGG	4 cut(s)	256, 470, 568, 1070
TaiI	ACGT	1 cut(s)	18
TaqI	TCGA	6 cut(s)	21, 420, 854, 879, 1504, 1574
TaqII	GACCGA	1 cut(s)	656
TatI	WGTACW	2 cut(s)	368, 1179
TauI	GCSGC	2 cut(s)	32, 2068
TfiI	GAWTC	3 cut(s)	110, 977, 1949
Tru1I	TTAA	6 cut(s)	615, 1077, 1191, 1662, 1751, 1944
Tru9I	TTAA	6 cut(s)	615, 1077, 1191, 1662, 1751, 1944
TscAI	CASTG	2 cut(s)	174, 1459
TseFI	GTSAC	4 cut(s)	668, 960, 1105, 1919
TseI	GCWGC	7 cut(s)	116, 713, 820, 1112, 1697, 2030, 2072
Tsp45I	GTSAC	4 cut(s)	668, 960, 1105, 1919
TspDTI	ATGAA	6 cut(s)	188, 560, 887, 1179, 1700, 2079
TspRI	CASTG	2 cut(s)	174, 1459
Tth111I	GACNNNGTC	1 cut(s)	17
VpaK11BI	GGWCC	2 cut(s)	1025, 1713
XapI	RAATTY	4 cut(s)	76, 175, 1296, 1516
XceI	RCATGY	3 cut(s)	1481, 1851, 1969
XcmI	CCANNNNNNNNNTGG	1 cut(s)	230
XmiI	GTMKAC	2 cut(s)	1356, 1764
XmnI	GAANNNNTTC	1 cut(s)	520
XspI	CTAG	4 cut(s)	717, 765, 1137, 1149
Zsp2I	ATGCAT	2 cut(s)	346, 1681

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.