Rmu_sc0001768.1_g000061

Belongs to the ubiquitin-conjugating enzyme family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001768.1
Physical Location & Seq
Forward (+)
248508 .. 251786
3279 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001768.1_g000061.1.cds

Sequence Viewer

Length: 1416 bp
atggataccgacgacgttgtcgaggtcgccgctccggtttcttgctctcggaaattgcgaaagaacaaggaggtgaatttgcaggatgtgattgaaattgacaaagatgattctgctactgcaatgtttatttatgagaaaattgacagaagtatcaaaggaaaggcagtggaaaattcttcagatggttaccatattcatcaatcaaaggaagctgtcctccatacttctgttggttcttctggtatggaaacccttggctcagtcaatggaattgaaattgccaacgatgttgccccagcatcaaatcactttattgacttggatggtcccaattctgatgcatctgctgacgatgttgatgactgtactgatacttgttttgaagagtttgattatgccttcttgcaatcccatttcgataatgtgggtattcctcctggagtagaggcgcctgtccctcatattccttggttgtcagatcctcctaaaagtaatgtaagttcagtttctggaagtagttctgttgatacaaggtatcaaatgaaatcagattatgttggcctccatggaaatgagctgtttccctggacagatcctcctagtttcaactttaagccaaccgttgtgggtagttcaagcttgaagacccaaacagacagtatcggtcacccaaatggacagtaccagtcatcttggaaacttccaaaagctgctagaagcagaaagaaacaatctgcttcacatccccaagttagtgctcctagtctcccagttggagcagaaccatcaaaatctcaaaggctcttaggagctttgcagcgtaaaaagaagctattttcttcaagtagttcgactaattatgatgcaatgaagttcgatactggagccgagacatctttttttggacataatttaccctacagtccaatttatcctcatggattacagtcaccctggttgtcagattctttgtcagcaattagtgctaaaccaaatcattcaagtttctatggtccaattggttccatataccctcctggagagttagtaggtatcccttgggttaagggtgtttcccaaactcaacacaatgtcactgctgcaagcctttcaacaacccctgctagacaattgtctagcaaggaaatagatgaaattatgcagaagtacaagggttttaaacaatttgatacagttgaagatcattcagaccatcactatatactctctggtacactcaacggtaattcaatgactcagccaccaaagaactgggcgaagagaattcaggaagagtggaagagcctggagaaagatttgcctggtgagcccttgtgcatattttcatgtcatggtagtggtaataagatttcccattcactgcctatttgcttttatgtgttcactttttaa

Protein Analysis

471

Amino Acids

51.5

Weight (kDa)

5.75

Isoelectric Point (pI)

47.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 17
AccB1I GGYRCC 1 cut(s) 451
AccBSI CCGCTC 1 cut(s) 32
AciI CCGC 1 cut(s) 30
AclWI GGATC 2 cut(s) 476, 590
AcsI RAATTY 3 cut(s) 76, 175, 1287
AcuI CTGAAG 1 cut(s) 165
AcyI GRCGYC 1 cut(s) 452
AfaI GTAC 4 cut(s) 370, 686, 1172, 1237
AjnI CCWGG 6 cut(s) 439, 587, 956, 1039, 1308, 1324
AluBI AGCT 6 cut(s) 215, 580, 642, 713, 815, 835
AluI AGCT 6 cut(s) 215, 580, 642, 713, 815, 835
Alw21I GWGCWC 1 cut(s) 763
Alw26I GTCTC 2 cut(s) 773, 887
AlwI GGATC 2 cut(s) 476, 590
AlwNI CAGNNNCTG 1 cut(s) 512
AoxI GGCC 1 cut(s) 562
ApeKI GCWGC 3 cut(s) 713, 820, 1103
ApoI RAATTY 3 cut(s) 76, 175, 1287
Asp700I GAANNNNTTC 1 cut(s) 520
AspLEI GCGC 1 cut(s) 454
AspS9I GGNCC 2 cut(s) 329, 1016
AsuHPI GGTGA 4 cut(s) 85, 662, 945, 1340
AvaII GGWCC 2 cut(s) 329, 1016
BaeI ACNNNNGTAYC 2 cut(s) 136, 169
BanI GGYRCC 1 cut(s) 451
BanII GRGCYC 1 cut(s) 1335
BbsI GAAGAC 1 cut(s) 653
Bbv12I GWGCWC 1 cut(s) 763
BbvI GCAGC 3 cut(s) 700, 832, 1090
BccI CCATC 4 cut(s) 179, 320, 796, 1224
BciT130I CCWGG 6 cut(s) 441, 589, 958, 1041, 1310, 1326
BciVI GTATCC 1 cut(s) 1067
BcoDI GTCTC 2 cut(s) 773, 887
BfaI CTAG 5 cut(s) 603, 717, 765, 1128, 1140
BfmI CTRYAG 1 cut(s) 922
BfoI RGCGCY 1 cut(s) 455
BfuI GTATCC 1 cut(s) 1067
BisI GCNGC 4 cut(s) 30, 714, 821, 1104
BlsI GCNGC 4 cut(s) 31, 715, 822, 1105
Bme1390I CCNGG 6 cut(s) 441, 589, 958, 1041, 1310, 1326
Bme18I GGWCC 2 cut(s) 329, 1016
BmgT120I GGNCC 2 cut(s) 329, 1016
BmiI GGNNCC 4 cut(s) 331, 453, 889, 1027
BmrFI CCNGG 6 cut(s) 441, 589, 958, 1041, 1310, 1326
BmrI ACTGGG 2 cut(s) 767, 1285
BmsI GCATC 4 cut(s) 311, 331, 353, 856
BmuI ACTGGG 2 cut(s) 767, 1285
BoxI GACNNNNGTC 1 cut(s) 1135
BpiI GAAGAC 1 cut(s) 653
BpmI CTGGAG 4 cut(s) 462, 906, 1062, 1331
BsaHI GRCGYC 1 cut(s) 452
BsaJI CCNNGG 6 cut(s) 256, 470, 568, 587, 956, 1061
BsaWI WCCGGW 1 cut(s) 34
BsaXI ACNNNNNCTCC 4 cut(s) 583, 613, 1035, 1065
Bse1I ACTGG 4 cut(s) 688, 773, 889, 1280
Bse3DI GCAATG 2 cut(s) 129, 876
BseBI CCWGG 6 cut(s) 441, 589, 958, 1041, 1310, 1326
BseDI CCNNGG 6 cut(s) 256, 470, 568, 587, 956, 1061
BseGI GGATG 3 cut(s) 91, 331, 745
BseMI GCAATG 2 cut(s) 129, 876
BseMII CTCAG 2 cut(s) 276, 1274
BseNI ACTGG 4 cut(s) 688, 773, 889, 1280
BseXI GCAGC 3 cut(s) 700, 832, 1090
BseYI CCCAGC 1 cut(s) 298
BshFI GGCC 1 cut(s) 564
BshNI GGYRCC 1 cut(s) 451
BsiHKAI GWGCWC 1 cut(s) 763
BsiSI CCGG 1 cut(s) 35
BslFI GGGAC 2 cut(s) 315, 443
BsmAI GTCTC 2 cut(s) 773, 887
BsmFI GGGAC 2 cut(s) 315, 443
BsnI GGCC 1 cut(s) 564
Bsp1286I GDGCHC 2 cut(s) 763, 1335
Bsp143I GATC 3 cut(s) 481, 595, 1204
Bsp19I CCATGG 1 cut(s) 568
BspACI CCGC 1 cut(s) 30
BspANI GGCC 1 cut(s) 564
BspCNI CTCAG 2 cut(s) 275, 1273
BspLI GGNNCC 4 cut(s) 331, 453, 889, 1027
BspPI GGATC 2 cut(s) 476, 590
BspQI GCTCTTC 1 cut(s) 1298
BspT107I GGYRCC 1 cut(s) 451
BsrBI CCGCTC 1 cut(s) 32
BsrDI GCAATG 2 cut(s) 129, 876
BsrI ACTGG 4 cut(s) 688, 773, 889, 1280
BssECI CCNNGG 6 cut(s) 256, 470, 568, 587, 956, 1061
BssMI GATC 3 cut(s) 481, 595, 1204
BssNI GRCGYC 1 cut(s) 452
BssT1I CCWWGG 4 cut(s) 256, 470, 568, 1061
Bst2UI CCWGG 6 cut(s) 441, 589, 958, 1041, 1310, 1326
Bst4CI ACNGT 8 cut(s) 368, 625, 662, 684, 926, 951, 1198, 1247
Bst6I CTCTTC 4 cut(s) 381, 1277, 1290, 1298
BstACI GRCGYC 1 cut(s) 452
BstAPI GCANNNNNTGC 1 cut(s) 986
BstC8I GCNNGC 1 cut(s) 1108
BstDEI CTNAG 3 cut(s) 262, 808, 1260
BstDSI CCRYGG 1 cut(s) 568
BstEII GGTNACC 2 cut(s) 188, 668
BstF5I GGATG 3 cut(s) 91, 331, 745
BstH2I RGCGCY 1 cut(s) 455
BstHHI GCGC 1 cut(s) 454
BstKTI GATC 3 cut(s) 484, 598, 1207
BstMAI GTCTC 2 cut(s) 773, 887
BstMBI GATC 3 cut(s) 481, 595, 1204
BstMWI GCNNNNNNNGC 2 cut(s) 986, 1330
BstNI CCWGG 6 cut(s) 441, 589, 958, 1041, 1310, 1326
BstPAI GACNNNNGTC 1 cut(s) 1135
BstPI GGTNACC 2 cut(s) 188, 668
BstSCI CCNGG 6 cut(s) 439, 587, 956, 1039, 1308, 1324
BstSFI CTRYAG 1 cut(s) 922
BstV1I GCAGC 3 cut(s) 700, 832, 1090
BstV2I GAAGAC 1 cut(s) 653
BstX2I RGATCY 2 cut(s) 481, 595
BstXI CCANNNNNNTGG 1 cut(s) 1275
BstYI RGATCY 2 cut(s) 481, 595
BsuI GTATCC 1 cut(s) 1067
BsuRI GGCC 1 cut(s) 564
BtgI CCRYGG 1 cut(s) 568
BtsCI GGATG 3 cut(s) 91, 331, 745
BtsI GCAGTG 3 cut(s) 174, 1098, 1382
BtsIMutI CAGTG 3 cut(s) 174, 1098, 1382
Cac8I GCNNGC 1 cut(s) 1108
CaiI CAGNNNCTG 1 cut(s) 512
CfoI GCGC 1 cut(s) 454
Cfr13I GGNCC 2 cut(s) 329, 1016
Csp6I GTAC 4 cut(s) 369, 685, 1171, 1236
CspCI CAANNNNNGTGG 2 cut(s) 609, 644
CviAII CATG 4 cut(s) 569, 941, 1350, 1355
CviQI GTAC 4 cut(s) 369, 685, 1171, 1236
DdeI CTNAG 3 cut(s) 262, 808, 1260
DinI GGCGCC 1 cut(s) 453
DpnI GATC 3 cut(s) 483, 597, 1206
DpnII GATC 3 cut(s) 481, 595, 1204
DraI TTTAAA 1 cut(s) 1183
DrdI GACNNNNNNGTC 1 cut(s) 17
DseDI GACNNNNNNGTC 1 cut(s) 17
Eam1104I CTCTTC 4 cut(s) 381, 1277, 1290, 1298
EarI CTCTTC 4 cut(s) 381, 1277, 1290, 1298
Eco130I CCWWGG 4 cut(s) 256, 470, 568, 1061
Eco24I GRGCYC 1 cut(s) 1335
Eco47I GGWCC 2 cut(s) 329, 1016
Eco57I CTGAAG 1 cut(s) 165
Eco91I GGTNACC 2 cut(s) 188, 668
EcoO65I GGTNACC 2 cut(s) 188, 668
EcoRI GAATTC 1 cut(s) 1287
EcoRII CCWGG 6 cut(s) 439, 587, 956, 1039, 1308, 1324
EcoT14I CCWWGG 4 cut(s) 256, 470, 568, 1061
EcoT22I ATGCAT 1 cut(s) 346
EcoT38I GRGCYC 1 cut(s) 1335
EgeI GGCGCC 1 cut(s) 453
EheI GGCGCC 1 cut(s) 453
ErhI CCWWGG 4 cut(s) 256, 470, 568, 1061
FaeI CATG 4 cut(s) 572, 944, 1353, 1358
FaqI GGGAC 2 cut(s) 315, 443
FatI CATG 4 cut(s) 568, 940, 1349, 1354
Fnu4HI GCNGC 4 cut(s) 30, 714, 821, 1104
FokI GGATG 3 cut(s) 98, 338, 732
FriOI GRGCYC 1 cut(s) 1335
Fsp4HI GCNGC 4 cut(s) 30, 714, 821, 1104
FspBI CTAG 5 cut(s) 603, 717, 765, 1128, 1140
GlaI GCGC 1 cut(s) 453
GluI GCNGC 4 cut(s) 30, 714, 821, 1104
GsaI CCCAGC 1 cut(s) 302
GsuI CTGGAG 4 cut(s) 462, 906, 1062, 1331
HaeII RGCGCY 1 cut(s) 455
HaeIII GGCC 1 cut(s) 564
HapII CCGG 1 cut(s) 35
HhaI GCGC 1 cut(s) 454
Hin1I GRCGYC 1 cut(s) 452
Hin1II CATG 4 cut(s) 572, 944, 1353, 1358
Hin6I GCGC 1 cut(s) 452
HinP1I GCGC 1 cut(s) 452
HindIII AAGCTT 1 cut(s) 640
HinfI GANTC 3 cut(s) 110, 968, 1258
HpaII CCGG 1 cut(s) 35
HphI GGTGA 4 cut(s) 85, 662, 945, 1340
Hpy166II GTNNAC 2 cut(s) 1238, 1407
Hpy188I TCNGA 7 cut(s) 51, 184, 340, 481, 553, 967, 1213
Hpy188III TCNNGA 2 cut(s) 513, 1292
Hpy8I GTNNAC 2 cut(s) 1238, 1407
Hpy99I CGWCG 2 cut(s) 14, 17
HpyAV CCTTC 1 cut(s) 412
HpyCH4III ACNGT 8 cut(s) 368, 625, 662, 684, 926, 951, 1198, 1247
HpyCH4IV ACGT 1 cut(s) 15
HpyCH4V TGCA 9 cut(s) 82, 122, 344, 409, 820, 869, 1106, 1165, 1341
HpyF10VI GCNNNNNNNGC 2 cut(s) 986, 1330
HpyF3I CTNAG 3 cut(s) 262, 808, 1260
HpySE526I ACGT 1 cut(s) 15
Hsp92I GRCGYC 1 cut(s) 452
Hsp92II CATG 4 cut(s) 572, 944, 1353, 1358
HspAI GCGC 1 cut(s) 452
KasI GGCGCC 1 cut(s) 451
Kzo9I GATC 3 cut(s) 481, 595, 1204
LguI GCTCTTC 1 cut(s) 1298
LmnI GCTCC 5 cut(s) 37, 766, 779, 812, 887
Lsp1109I GCAGC 3 cut(s) 700, 832, 1090
LweI GCATC 4 cut(s) 311, 331, 353, 856
MaeI CTAG 5 cut(s) 603, 717, 765, 1128, 1140
MaeII ACGT 1 cut(s) 15
MaeIII GTNAC 4 cut(s) 188, 668, 951, 1096
MalI GATC 3 cut(s) 483, 597, 1206
MbiI CCGCTC 1 cut(s) 32
MboI GATC 3 cut(s) 481, 595, 1204
MboII GAAGA 9 cut(s) 171, 231, 398, 658, 834, 1214, 1294, 1307, 1315
MfeI CAATTG 2 cut(s) 1020, 1133
MflI RGATCY 2 cut(s) 481, 595
MhlI GDGCHC 2 cut(s) 763, 1335
Mly113I GGCGCC 1 cut(s) 452
MlyI GAGTC 1 cut(s) 1252
MmeI TCCRAC 1 cut(s) 757
Mph1103I ATGCAT 1 cut(s) 346
MroXI GAANNNNTTC 1 cut(s) 520
MseI TTAA 4 cut(s) 615, 1068, 1182, 1414
MslI CAYNNNNRTG 3 cut(s) 573, 675, 1359
MspI CCGG 1 cut(s) 35
MspR9I CCNGG 6 cut(s) 441, 589, 958, 1041, 1310, 1326
MunI CAATTG 2 cut(s) 1020, 1133
MvaI CCWGG 6 cut(s) 441, 589, 958, 1041, 1310, 1326
MwoI GCNNNNNNNGC 2 cut(s) 986, 1330
NarI GGCGCC 1 cut(s) 452
NcoI CCATGG 1 cut(s) 568
NdeII GATC 3 cut(s) 481, 595, 1204
NlaIII CATG 4 cut(s) 572, 944, 1353, 1358
NlaIV GGNNCC 4 cut(s) 331, 453, 889, 1027
NmeAIII GCCGAG 1 cut(s) 916
NmuCI GTSAC 3 cut(s) 668, 951, 1096
NsiI ATGCAT 1 cut(s) 346
PciSI GCTCTTC 1 cut(s) 1298
PcsI WCGNNNNNNNCGW 2 cut(s) 18, 55
PdmI GAANNNNTTC 1 cut(s) 520
PfeI GAWTC 2 cut(s) 110, 968
PflFI GACNNNGTC 1 cut(s) 17
PfoI TCCNGGA 2 cut(s) 439, 1039
PkrI GCNGC 4 cut(s) 31, 715, 822, 1105
PleI GAGTC 1 cut(s) 1252
PluTI GGCGCC 1 cut(s) 455
PpsI GAGTC 1 cut(s) 1252
PshAI GACNNNNGTC 1 cut(s) 1135
Psp6I CCWGG 6 cut(s) 439, 587, 956, 1039, 1308, 1324
PspEI GGTNACC 2 cut(s) 188, 668
PspFI CCCAGC 1 cut(s) 298
PspGI CCWGG 6 cut(s) 439, 587, 956, 1039, 1308, 1324
PspN4I GGNNCC 4 cut(s) 331, 453, 889, 1027
PspPI GGNCC 2 cut(s) 329, 1016
PsrI GAACNNNNNNTAC 2 cut(s) 487, 519
PstNI CAGNNNCTG 1 cut(s) 512
PsuI RGATCY 2 cut(s) 481, 595
PsyI GACNNNGTC 1 cut(s) 17
RsaI GTAC 4 cut(s) 370, 686, 1172, 1237
RsaNI GTAC 4 cut(s) 369, 685, 1171, 1236
RseI CAYNNNNRTG 3 cut(s) 573, 675, 1359
SapI GCTCTTC 1 cut(s) 1298
SaqAI TTAA 4 cut(s) 615, 1068, 1182, 1414
SatI GCNGC 4 cut(s) 30, 714, 821, 1104
Sau3AI GATC 3 cut(s) 481, 595, 1204
Sau96I GGNCC 2 cut(s) 329, 1016
SchI GAGTC 1 cut(s) 1252
ScrFI CCNGG 6 cut(s) 441, 589, 958, 1041, 1310, 1326
SduI GDGCHC 2 cut(s) 763, 1335
SfaNI GCATC 4 cut(s) 311, 331, 353, 856
SfcI CTRYAG 1 cut(s) 922
SfoI GGCGCC 1 cut(s) 453
SinI GGWCC 2 cut(s) 329, 1016
SmiMI CAYNNNNRTG 3 cut(s) 573, 675, 1359
SsiI CCGC 1 cut(s) 30
SspDI GGCGCC 1 cut(s) 451
SspMI CTAG 5 cut(s) 603, 717, 765, 1128, 1140
StyD4I CCNGG 6 cut(s) 439, 587, 956, 1039, 1308, 1324
StyI CCWWGG 4 cut(s) 256, 470, 568, 1061
TaaI ACNGT 8 cut(s) 368, 625, 662, 684, 926, 951, 1198, 1247
TaiI ACGT 1 cut(s) 18
TaqI TCGA 4 cut(s) 21, 420, 854, 879
TaqII GACCGA 1 cut(s) 656
TatI WGTACW 2 cut(s) 368, 1170
TauI GCSGC 1 cut(s) 32
TfiI GAWTC 2 cut(s) 110, 968
Tru1I TTAA 4 cut(s) 615, 1068, 1182, 1414
Tru9I TTAA 4 cut(s) 615, 1068, 1182, 1414
TscAI CASTG 3 cut(s) 174, 1105, 1389
TseFI GTSAC 3 cut(s) 668, 951, 1096
TseI GCWGC 3 cut(s) 713, 820, 1103
Tsp45I GTSAC 3 cut(s) 668, 951, 1096
TspDTI ATGAA 5 cut(s) 188, 560, 887, 1170, 1338
TspRI CASTG 3 cut(s) 174, 1105, 1389
Tth111I GACNNNGTC 1 cut(s) 17
VpaK11BI GGWCC 2 cut(s) 329, 1016
XapI RAATTY 3 cut(s) 76, 175, 1287
XcmI CCANNNNNNNNNTGG 2 cut(s) 230, 1272
XmnI GAANNNNTTC 1 cut(s) 520
XspI CTAG 5 cut(s) 603, 717, 765, 1128, 1140
Zsp2I ATGCAT 1 cut(s) 346
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.