Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0004980

Physical Location & Seq

Genomic Coordinates Reverse (-)

13130800 .. 13137174

Gene Structure 6375 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g20000.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2148 bp

ATGGAGCCGCGGCTAAACGAACCCGAGAATCCCAATAACAAGCGAGCTCATCCAAACATGGATACCGACGACGTTGTCGAGGTTGCTGCTCCGGTCGCTTGCTCTCGGAAACTGCGGAAGAACAAACAGGTGATTTTGCAGGATGTGATTGAAATTGACAAAGATGATTCTGCTGCTGCAATATTTATTCATGAGAAATTTGACAGAACTATCAAAGGAAAGGCAGTGAAAAGCTCTTCAGACGGTCACCATATTTATCAATCAGAGGAAGCTGTCCTCCATACTTCTCTTGGTTCCTCCGGTATGCAAACCTTTGGATCAGTCAATGGGATCGAAATTACTAAGGATGTCGCCCCAGCATCAAATCACTTTATTGACTTAGATGGTCCCAATTCTGATGCATCTGCTGATGATGTTGATGACTATACTGATACTAGTTTTGAAGAGTTTGACTATGCTTTCTTGCAATCCCATTTCGATAATGTGGGTATCCCTCCTGGAATAGAGGCACCTGTCCCACATATTCCTTGGTTGTTAAATCCTCCTAAAACTAATGTAAGTTCGGTTTCTGGAAGTAGTTCTGTTGATACAAGGTGTCAAATGAAATCAGATTATGTTGGCAGCCATGGACATGAGCTGTATCCTTGGGATCCTTTTAGTTTTGACTTTAAGCCAGCTGCTATAGGCAGTTCAAGCTTGAAGACCCCAGCAGATGGAATCAGTCACCCAAAGGGATGGTATCAGTCATCTTGGAAACTTCCAAAAGCTGCTAGAAGCAGAAAGAAACACTCTGCTCCACATCCCCAAGGTAGTGCTCCTAGTCTCCCAGTTGGAGCAGAACCATCAAAATCTCGAAGGTTCTTAGGAGCTTTGCAACGTAAAAAAAAGCTATTTTCTTCAAGTAGTTCAGCTAAATATGATGCAATGAAGTTCAATACTGGAGCTGAGACATCTTTGTTCGGACATTTACCCAACATTGCAATTGATCCTTTCGGAATACAGTCGCCCACTGCCTGGTTGTCAGATTCTTTGTTCCCAACTAGTGCTAAACCACATCATTCAAGTTTCTACAGTCCAACTGGTTCCATATATCCTCCTCCTGGAGGATTAGCAGGTGTCCCTTGGGTTAAGGGTGTTTCCCAAGCTCATCAAAATGTCACTGCTGCAAGTCTTTCAACTACCCCTGCTAGACAATTGACTACCCAGGAAATAGATGTGATTATGCAGAAGTACAAGGGTTTTAAACAATTTGATACAGTTGAAGATTATTCTGACCATCATTATACTCTTGCTGGTACACTCAATGGTAATTCCATGACTCAGCCACCAAAGAACTGGGCAAAGAGAATTCAGGAAGAGTGGAAGAGCCTGGAGAAAGATCTGCCTGAAACAGTATTTGTTAGAGTTTATGAGACAAGGATGGATCTATTGAGAGCTGTAATTGTTGGAGCTGAGGGTACTCCTTACCATGATGGTCTCTTTTTCTTTGATGTTTCCTTCCCCAGTGGTTACCCCAGTGTGCCGCCGCATGTCTACTACCACTCTGGTGGCCTTCGACTAAATCCTAATTTGTATGCTTGTGGGAAAGTATGCCTCAGCCTTCTCAACACCTGGTCTGGGAGCTCTAAAGAGATGTGGATCCCGGGTGTTTCCACCATTCTACAAGTTTTAGTGTCAATACAAGGGCTGATCTTGAATACAAAGCCCTACTTTAATGAGCCTGGATATGCATCTATGAATGGTTCAGCAGCTGGTGAAACGAGGTCGCTGCAATATAATGAGGATACTTTCCTCCTATCTTTAACAACTATGGTATACATGATGAGGAGGCCTCCCAAGCATTTTGAGGATTTTGTTGTGGGGCATTTCCGGAATCGTGCTCATGACATTTTGGTGGCATGTAAAGCATACATGGATGGCGCTCAAGTTGGATGTCTGGTCAAAGGTGGGGTTCAGGATGTTGATGAGGGAGATAAGAGTTGTTCTCAGCGGTTTAAGGATTCTTTAGCAGGGCACATGCCGATGCTTGTCAAAGAGTTTATGCAGATAGGTGTCAAGGATTGCGAGAAATATTTGTCACCAGCTGTAAATGGGAACGAGGAGATTGGTAGTATGCCTCAGGCTGCAACATCAATGGTTTCTTGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019899 GO:0031625 GO:0032446 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044389 GO:0044424 GO:0044464 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

UQ_con

Protein Analysis

716

Amino Acids

78.5

Weight (kDa)

6.23

Isoelectric Point (pI)

48.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UQ_con	PF00179	430 - 491	1.6e-09	Ubiquitin-conjugating enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004980)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G15355
fragaria_vesca	FvH4_3g20000 FvH4_3g20000 FvH4_3g20000 FvH4_3g20000 FvH4_3g20000 FvH4_3g20000 FvH4_3g20000
malus_domestica	MD03G1227200.v1.1 MD11G1246700.v1.1
prunus_persica	Prupe.4G181600_v2.0.a1 Prupe.4G181600_v2.0.a1 Prupe.4G181600_v2.0.a1
pyrus_communis	pycom03g17490 pycom11g21880
rosa_chinensis	RchiOBHm_Chr5g0033831
rosa_laevigata	RLG00000033504
rosa_multiflora	Rmu_co8216886.1_g000001 Rmu_co8329207.1_g000001 Rmu_sc0001768.1_g000061 Rmu_sc0008210.1_g000001
rosa_roxburghii	Rroxscaffold_1G00046350
rosa_rugosa	Rorug05G0142600 Rorug05G0142700.1 Rorug05G0142800
rosa_samantha	Rh5AG233600 Rh5BG234100 Rh5CG264200 Rh5DG240900
rosa_wichuraiana	Rw5G021560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1103
AasI	GACNNNNNNGTC	1 cut(s)	74
Acc36I	ACCTGC	1 cut(s)	1103
AccB1I	GGYRCC	1 cut(s)	508
AccB7I	CCANNNNNTGG	2 cut(s)	713, 1014
AccI	GTMKAC	2 cut(s)	1533, 1815
AccII	CGCG	1 cut(s)	10
AccIII	TCCGGA	1 cut(s)	1869
AciI	CCGC	6 cut(s)	8, 10, 115, 1523, 1526, 1990
AclWI	GGATC	8 cut(s)	325, 338, 644, 657, 980, 1431, 1633, 1646
AcsI	RAATTY	2 cut(s)	197, 1347
AcuI	CTGAAG	1 cut(s)	222
AfaI	GTAC	3 cut(s)	1232, 1297, 1459
AfiI	CCNNNNNNNGG	5 cut(s)	713, 1014, 1100, 1103, 1617
AhlI	ACTAGT	2 cut(s)	434, 1040
AjnI	CCWGG	7 cut(s)	496, 1013, 1099, 1203, 1368, 1610, 1720
AleI	CACNNNNGTG	1 cut(s)	1545
Alw21I	GWGCWC	4 cut(s)	49, 817, 1625, 1882
Alw26I	GTCTC	4 cut(s)	827, 941, 1406, 1481
AlwI	GGATC	8 cut(s)	325, 338, 644, 657, 980, 1431, 1633, 1646
AlwNI	CAGNNNCTG	1 cut(s)	1751
Ama87I	CYCGRG	2 cut(s)	23, 1642
Aor13HI	TCCGGA	1 cut(s)	1869
AoxI	GGCC	2 cut(s)	1549, 1829
ApoI	RAATTY	2 cut(s)	197, 1347
Asp700I	GAANNNNTTC	1 cut(s)	577
AspLEI	GCGC	1 cut(s)	1922
AspS9I	GGNCC	1 cut(s)	386
AsuC2I	CCSGG	2 cut(s)	1643, 1644
AsuHPI	GGTGA	5 cut(s)	142, 239, 716, 1766, 2070
AvaI	CYCGRG	2 cut(s)	23, 1642
AvaII	GGWCC	1 cut(s)	386
AxyI	CCTNAGG	1 cut(s)	2118
BaeGI	GKGCMC	1 cut(s)	2016
BamHI	GGATCC	2 cut(s)	649, 1638
BanI	GGYRCC	1 cut(s)	508
BanII	GRGCYC	2 cut(s)	49, 1625
BbsI	GAAGAC	1 cut(s)	707
Bbv12I	GWGCWC	4 cut(s)	49, 817, 1625, 1882
BbvCI	CCTCAGC	2 cut(s)	1452, 1595
BccI	CCATC	8 cut(s)	377, 707, 729, 850, 1284, 1414, 1466, 1910
BcgI	CGANNNNNNTGC	4 cut(s)	68, 102, 1750, 1784
BciT130I	CCWGG	7 cut(s)	498, 1015, 1101, 1205, 1370, 1612, 1722
BciVI	GTATCC	4 cut(s)	55, 500, 651, 1777
BcnI	CCSGG	2 cut(s)	1643, 1644
BcoDI	GTCTC	4 cut(s)	827, 941, 1406, 1481
BcuI	ACTAGT	2 cut(s)	434, 1040
BfaI	CTAG	5 cut(s)	435, 771, 819, 1041, 1188
BfmI	CTRYAG	2 cut(s)	681, 1069
BfoI	RGCGCY	1 cut(s)	1923
BfuAI	ACCTGC	1 cut(s)	1103
BfuI	GTATCC	4 cut(s)	55, 500, 651, 1777
BglII	AGATCT	1 cut(s)	1378
Bme1390I	CCNGG	9 cut(s)	498, 1015, 1101, 1205, 1370, 1612, 1643, 1644, 1722
Bme18I	GGWCC	1 cut(s)	386
BmeT110I	CYCGRG	2 cut(s)	23, 1642
BmgT120I	GGNCC	1 cut(s)	386
BmiI	GGNNCC	7 cut(s)	6, 295, 388, 510, 651, 1084, 1640
BmrFI	CCNGG	9 cut(s)	498, 1015, 1101, 1205, 1370, 1612, 1643, 1644, 1722
BmrI	ACTGGG	4 cut(s)	821, 1345, 1497, 1509
BmsI	GCATC	6 cut(s)	368, 388, 410, 910, 1739, 2013
BmuI	ACTGGG	4 cut(s)	821, 1345, 1497, 1509
BpiI	GAAGAC	1 cut(s)	707
BplI	GAGNNNNNCTC	4 cut(s)	1816, 1848, 1969, 2001
BpmI	CTGGAG	3 cut(s)	960, 1122, 1391
Bpu10I	CCTNAGC	2 cut(s)	1452, 1595
BpuEI	CTTGAG	1 cut(s)	1908
BpuMI	CCSGG	2 cut(s)	1643, 1644
BsaBI	GATNNNNATC	2 cut(s)	1637, 1729
BsaI	GGTCTC	1 cut(s)	1481
BsaJI	CCNNGG	8 cut(s)	8, 527, 625, 644, 805, 1121, 1203, 1642
BsaWI	WCCGGW	3 cut(s)	91, 299, 1869
Bsc4I	CCNNNNNNNGG	5 cut(s)	713, 1014, 1100, 1103, 1617
Bse1I	ACTGG	6 cut(s)	827, 943, 1084, 1340, 1503, 1515
Bse21I	CCTNAGG	1 cut(s)	2118
Bse3DI	GCAATG	2 cut(s)	930, 975
Bse8I	GATNNNNATC	2 cut(s)	1637, 1729
BseAI	TCCGGA	1 cut(s)	1869
BseBI	CCWGG	7 cut(s)	498, 1015, 1101, 1205, 1370, 1612, 1722
BseDI	CCNNGG	8 cut(s)	8, 527, 625, 644, 805, 1121, 1203, 1642
BseGI	GGATG	9 cut(s)	49, 148, 352, 740, 799, 1425, 1921, 1937, 1963
BseJI	GATNNNNATC	2 cut(s)	1637, 1729
BseLI	CCNNNNNNNGG	5 cut(s)	713, 1014, 1100, 1103, 1617
BseMI	GCAATG	2 cut(s)	930, 975
BseMII	CTCAG	6 cut(s)	936, 1334, 1443, 1609, 2000, 2132
BseNI	ACTGG	6 cut(s)	827, 943, 1084, 1340, 1503, 1515
BseRI	GAGGAG	3 cut(s)	1086, 1840, 2114
BseSI	GKGCMC	1 cut(s)	2016
BseYI	CCCAGC	2 cut(s)	355, 706
Bsh1236I	CGCG	1 cut(s)	10
Bsh1285I	CGRYCG	1 cut(s)	96
BshFI	GGCC	2 cut(s)	1551, 1831
BshNI	GGYRCC	1 cut(s)	508
BsiEI	CGRYCG	1 cut(s)	96
BsiHKAI	GWGCWC	4 cut(s)	49, 817, 1625, 1882
BsiHKCI	CYCGRG	2 cut(s)	23, 1642
BsiSI	CCGG	4 cut(s)	92, 300, 1643, 1870
BslFI	GGGAC	3 cut(s)	372, 500, 1103
BslI	CCNNNNNNNGG	5 cut(s)	713, 1014, 1100, 1103, 1617
BsmAI	GTCTC	4 cut(s)	827, 941, 1406, 1481
BsmFI	GGGAC	3 cut(s)	372, 500, 1103
BsnI	GGCC	2 cut(s)	1551, 1831
Bso31I	GGTCTC	1 cut(s)	1481
BsoBI	CYCGRG	2 cut(s)	23, 1642
Bsp1286I	GDGCHC	5 cut(s)	49, 817, 1625, 1882, 2016
Bsp13I	TCCGGA	1 cut(s)	1869
Bsp143I	GATC	8 cut(s)	317, 330, 649, 985, 1378, 1423, 1638, 1689
Bsp19I	CCATGG	1 cut(s)	625
BspACI	CCGC	6 cut(s)	8, 10, 115, 1523, 1526, 1990
BspANI	GGCC	2 cut(s)	1551, 1831
BspCNI	CTCAG	6 cut(s)	937, 1333, 1444, 1608, 1999, 2131
BspEI	TCCGGA	1 cut(s)	1869
BspFNI	CGCG	1 cut(s)	10
BspHI	TCATGA	2 cut(s)	190, 1882
BspLI	GGNNCC	7 cut(s)	6, 295, 388, 510, 651, 1084, 1640
BspMI	ACCTGC	1 cut(s)	1103
BspPI	GGATC	8 cut(s)	325, 338, 644, 657, 980, 1431, 1633, 1646
BspQI	GCTCTTC	2 cut(s)	241, 1358
BspT107I	GGYRCC	1 cut(s)	508
BspTNI	GGTCTC	1 cut(s)	1481
BsrDI	GCAATG	2 cut(s)	930, 975
BsrI	ACTGG	6 cut(s)	827, 943, 1084, 1340, 1503, 1515
BssECI	CCNNGG	8 cut(s)	8, 527, 625, 644, 805, 1121, 1203, 1642
BssMI	GATC	8 cut(s)	317, 330, 649, 985, 1378, 1423, 1638, 1689
BssNAI	GTATAC	1 cut(s)	1816
BssT1I	CCWWGG	5 cut(s)	527, 625, 644, 805, 1121
Bst1107I	GTATAC	1 cut(s)	1816
Bst2UI	CCWGG	7 cut(s)	498, 1015, 1101, 1205, 1370, 1612, 1722
Bst4CI	ACNGT	5 cut(s)	245, 1002, 1073, 1258, 1393
Bst6I	CTCTTC	4 cut(s)	241, 438, 1350, 1358
BstC8I	GCNNGC	3 cut(s)	45, 100, 675
BstDEI	CTNAG	9 cut(s)	342, 379, 862, 945, 1320, 1452, 1595, 1986, 2118
BstDSI	CCRYGG	2 cut(s)	8, 625
BstEII	GGTNACC	2 cut(s)	245, 1508
BstENI	CCTNNNNNAGG	1 cut(s)	1101
BstF5I	GGATG	9 cut(s)	49, 148, 352, 740, 799, 1425, 1921, 1937, 1963
BstFNI	CGCG	1 cut(s)	10
BstH2I	RGCGCY	1 cut(s)	1923
BstHHI	GCGC	1 cut(s)	1922
BstKTI	GATC	8 cut(s)	320, 333, 652, 988, 1381, 1426, 1641, 1692
BstMAI	GTCTC	4 cut(s)	827, 941, 1406, 1481
BstMBI	GATC	8 cut(s)	317, 330, 649, 985, 1378, 1423, 1638, 1689
BstMCI	CGRYCG	1 cut(s)	96
BstMWI	GCNNNNNNNGC	4 cut(s)	95, 693, 1837, 1904
BstNI	CCWGG	7 cut(s)	498, 1015, 1101, 1205, 1370, 1612, 1722
BstNSI	RCATGY	3 cut(s)	1532, 1902, 2020
BstPI	GGTNACC	2 cut(s)	245, 1508
BstSCI	CCNGG	9 cut(s)	496, 1013, 1099, 1203, 1368, 1610, 1641, 1642, 1720
BstSFI	CTRYAG	2 cut(s)	681, 1069
BstSLI	GKGCMC	1 cut(s)	2016
BstUI	CGCG	1 cut(s)	10
BstV2I	GAAGAC	1 cut(s)	707
BstX2I	RGATCY	4 cut(s)	649, 1378, 1423, 1638
BstXI	CCANNNNNNTGG	3 cut(s)	735, 1335, 1547
BstYI	RGATCY	4 cut(s)	649, 1378, 1423, 1638
BstZ17I	GTATAC	1 cut(s)	1816
Bsu36I	CCTNAGG	1 cut(s)	2118
BsuI	GTATCC	4 cut(s)	55, 500, 651, 1777
BsuRI	GGCC	2 cut(s)	1551, 1831
BtgI	CCRYGG	2 cut(s)	8, 625
BtsCI	GGATG	9 cut(s)	49, 148, 352, 740, 799, 1425, 1921, 1937, 1963
BtsI	GCAGTG	3 cut(s)	231, 1008, 1158
BtsIMutI	CAGTG	5 cut(s)	231, 1008, 1158, 1510, 1522
BveI	ACCTGC	1 cut(s)	1103
Cac8I	GCNNGC	3 cut(s)	45, 100, 675
CaiI	CAGNNNCTG	1 cut(s)	1751
CciI	TCATGA	2 cut(s)	190, 1882
CfoI	GCGC	1 cut(s)	1922
Cfr13I	GGNCC	1 cut(s)	386
Cfr42I	CCGCGG	1 cut(s)	11
Cfr9I	CCCGGG	1 cut(s)	1642
CsiI	ACCWGGT	1 cut(s)	1610
Csp6I	GTAC	3 cut(s)	1231, 1296, 1458
CviQI	GTAC	3 cut(s)	1231, 1296, 1458
DdeI	CTNAG	9 cut(s)	342, 379, 862, 945, 1320, 1452, 1595, 1986, 2118
DpnI	GATC	8 cut(s)	319, 332, 651, 987, 1380, 1425, 1640, 1691
DpnII	GATC	8 cut(s)	317, 330, 649, 985, 1378, 1423, 1638, 1689
DraI	TTTAAA	1 cut(s)	1243
DrdI	GACNNNNNNGTC	1 cut(s)	74
DseDI	GACNNNNNNGTC	1 cut(s)	74
Eam1104I	CTCTTC	4 cut(s)	241, 438, 1350, 1358
EarI	CTCTTC	4 cut(s)	241, 438, 1350, 1358
Ecl136II	GAGCTC	2 cut(s)	47, 1623
Eco130I	CCWWGG	5 cut(s)	527, 625, 644, 805, 1121
Eco147I	AGGCCT	1 cut(s)	1831
Eco24I	GRGCYC	2 cut(s)	49, 1625
Eco31I	GGTCTC	1 cut(s)	1481
Eco47I	GGWCC	1 cut(s)	386
Eco53kI	GAGCTC	2 cut(s)	47, 1623
Eco57I	CTGAAG	1 cut(s)	222
Eco81I	CCTNAGG	1 cut(s)	2118
Eco88I	CYCGRG	2 cut(s)	23, 1642
Eco91I	GGTNACC	2 cut(s)	245, 1508
EcoICRI	GAGCTC	2 cut(s)	47, 1623
EcoNI	CCTNNNNNAGG	1 cut(s)	1101
EcoO65I	GGTNACC	2 cut(s)	245, 1508
EcoRI	GAATTC	1 cut(s)	1347
EcoRII	CCWGG	7 cut(s)	496, 1013, 1099, 1203, 1368, 1610, 1720
EcoT14I	CCWWGG	5 cut(s)	527, 625, 644, 805, 1121
EcoT22I	ATGCAT	2 cut(s)	403, 1732
EcoT38I	GRGCYC	2 cut(s)	49, 1625
ErhI	CCWWGG	5 cut(s)	527, 625, 644, 805, 1121
FalI	AAGNNNNNCTT	2 cut(s)	1694, 1726
FaqI	GGGAC	3 cut(s)	372, 500, 1103
FblI	GTMKAC	2 cut(s)	1533, 1815
FokI	GGATG	9 cut(s)	36, 155, 359, 747, 786, 1432, 1928, 1944, 1970
FriOI	GRGCYC	2 cut(s)	49, 1625
FspBI	CTAG	5 cut(s)	435, 771, 819, 1041, 1188
GlaI	GCGC	1 cut(s)	1921
GsaI	CCCAGC	2 cut(s)	359, 710
GsuI	CTGGAG	3 cut(s)	960, 1122, 1391
HaeII	RGCGCY	1 cut(s)	1923
HaeIII	GGCC	2 cut(s)	1551, 1831
HapII	CCGG	4 cut(s)	92, 300, 1643, 1870
HhaI	GCGC	1 cut(s)	1922
Hin6I	GCGC	1 cut(s)	1920
HinP1I	GCGC	1 cut(s)	1920
HindIII	AAGCTT	1 cut(s)	694
HinfI	GANTC	7 cut(s)	28, 167, 717, 1025, 1318, 1873, 2000
HpaII	CCGG	4 cut(s)	92, 300, 1643, 1870
HphI	GGTGA	5 cut(s)	142, 239, 716, 1766, 2070
Hpy166II	GTNNAC	3 cut(s)	1298, 1534, 1816
Hpy188I	TCNGA	9 cut(s)	108, 241, 265, 397, 610, 962, 995, 1024, 1273
Hpy188III	TCNNGA	8 cut(s)	191, 570, 852, 1352, 1693, 1870, 1883, 1955
Hpy8I	GTNNAC	3 cut(s)	1298, 1534, 1816
Hpy99I	CGWCG	2 cut(s)	71, 74
HpyAV	CCTTC	4 cut(s)	849, 1507, 1562, 1610
HpyCH4III	ACNGT	5 cut(s)	245, 1002, 1073, 1258, 1393
HpyCH4IV	ACGT	2 cut(s)	72, 877
HpyF10VI	GCNNNNNNNGC	4 cut(s)	95, 693, 1837, 1904
HpyF3I	CTNAG	9 cut(s)	342, 379, 862, 945, 1320, 1452, 1595, 1986, 2118
HpySE526I	ACGT	2 cut(s)	72, 877
HspAI	GCGC	1 cut(s)	1920
Kpn2I	TCCGGA	1 cut(s)	1869
KspI	CCGCGG	1 cut(s)	11
Kzo9I	GATC	8 cut(s)	317, 330, 649, 985, 1378, 1423, 1638, 1689
LguI	GCTCTTC	2 cut(s)	241, 1358
LmnI	GCTCC	9 cut(s)	4, 94, 799, 820, 833, 866, 941, 1448, 1620
LweI	GCATC	6 cut(s)	368, 388, 410, 910, 1739, 2013
MabI	ACCWGGT	1 cut(s)	1610
MaeI	CTAG	5 cut(s)	435, 771, 819, 1041, 1188
MaeII	ACGT	2 cut(s)	72, 877
MaeIII	GTNAC	5 cut(s)	245, 722, 1156, 1508, 2076
MalI	GATC	8 cut(s)	319, 332, 651, 987, 1380, 1425, 1640, 1691
MboI	GATC	8 cut(s)	317, 330, 649, 985, 1378, 1423, 1638, 1689
MboII	GAAGA	8 cut(s)	130, 228, 455, 712, 888, 1274, 1367, 1375
MfeI	CAATTG	2 cut(s)	981, 1193
MflI	RGATCY	4 cut(s)	649, 1378, 1423, 1638
MhlI	GDGCHC	5 cut(s)	49, 817, 1625, 1882, 2016
MlyI	GAGTC	1 cut(s)	1312
MmeI	TCCRAC	4 cut(s)	811, 1100, 1426, 1909
Mph1103I	ATGCAT	2 cut(s)	403, 1732
MroI	TCCGGA	1 cut(s)	1869
MroXI	GAANNNNTTC	1 cut(s)	577
MseI	TTAA	7 cut(s)	536, 669, 1128, 1242, 1713, 1802, 1995
MslI	CAYNNNNRTG	5 cut(s)	630, 1152, 1545, 1892, 2021
MspA1I	CMGCKG	5 cut(s)	10, 677, 1751, 1990, 2084
MspI	CCGG	4 cut(s)	92, 300, 1643, 1870
MspR9I	CCNGG	9 cut(s)	498, 1015, 1101, 1205, 1370, 1612, 1643, 1644, 1722
MunI	CAATTG	2 cut(s)	981, 1193
MvaI	CCWGG	7 cut(s)	498, 1015, 1101, 1205, 1370, 1612, 1722
MvnI	CGCG	1 cut(s)	10
MwoI	GCNNNNNNNGC	4 cut(s)	95, 693, 1837, 1904
NciI	CCSGG	2 cut(s)	1643, 1644
NcoI	CCATGG	1 cut(s)	625
NdeII	GATC	8 cut(s)	317, 330, 649, 985, 1378, 1423, 1638, 1689
NlaIV	GGNNCC	7 cut(s)	6, 295, 388, 510, 651, 1084, 1640
NmuCI	GTSAC	4 cut(s)	245, 722, 1156, 2076
NsiI	ATGCAT	2 cut(s)	403, 1732
NspI	RCATGY	3 cut(s)	1532, 1902, 2020
OliI	CACNNNNGTG	1 cut(s)	1545
PagI	TCATGA	2 cut(s)	190, 1882
PaqCI	CACCTGC	1 cut(s)	1103
PceI	AGGCCT	1 cut(s)	1831
PciSI	GCTCTTC	2 cut(s)	241, 1358
PcsI	WCGNNNNNNNCGW	1 cut(s)	75
PdmI	GAANNNNTTC	1 cut(s)	577
PfeI	GAWTC	6 cut(s)	28, 167, 717, 1025, 1873, 2000
PflFI	GACNNNGTC	1 cut(s)	74
PflMI	CCANNNNNTGG	2 cut(s)	713, 1014
PfoI	TCCNGGA	2 cut(s)	496, 1099
PleI	GAGTC	1 cut(s)	1312
PpsI	GAGTC	1 cut(s)	1312
Psp124BI	GAGCTC	2 cut(s)	49, 1625
Psp6I	CCWGG	7 cut(s)	496, 1013, 1099, 1203, 1368, 1610, 1720
PspEI	GGTNACC	2 cut(s)	245, 1508
PspFI	CCCAGC	2 cut(s)	355, 706
PspGI	CCWGG	7 cut(s)	496, 1013, 1099, 1203, 1368, 1610, 1720
PspN4I	GGNNCC	7 cut(s)	6, 295, 388, 510, 651, 1084, 1640
PspPI	GGNCC	1 cut(s)	386
PstNI	CAGNNNCTG	1 cut(s)	1751
PsuI	RGATCY	4 cut(s)	649, 1378, 1423, 1638
PsyI	GACNNNGTC	1 cut(s)	74
PvuII	CAGCTG	3 cut(s)	677, 1751, 2084
RsaI	GTAC	3 cut(s)	1232, 1297, 1459
RsaNI	GTAC	3 cut(s)	1231, 1296, 1458
RseI	CAYNNNNRTG	5 cut(s)	630, 1152, 1545, 1892, 2021
SacI	GAGCTC	2 cut(s)	49, 1625
SacII	CCGCGG	1 cut(s)	11
SapI	GCTCTTC	2 cut(s)	241, 1358
SaqAI	TTAA	7 cut(s)	536, 669, 1128, 1242, 1713, 1802, 1995
Sau3AI	GATC	8 cut(s)	317, 330, 649, 985, 1378, 1423, 1638, 1689
Sau96I	GGNCC	1 cut(s)	386
SchI	GAGTC	1 cut(s)	1312
ScrFI	CCNGG	9 cut(s)	498, 1015, 1101, 1205, 1370, 1612, 1643, 1644, 1722
SduI	GDGCHC	5 cut(s)	49, 817, 1625, 1882, 2016
SexAI	ACCWGGT	1 cut(s)	1610
SfaNI	GCATC	6 cut(s)	368, 388, 410, 910, 1739, 2013
SfcI	CTRYAG	2 cut(s)	681, 1069
Sfr303I	CCGCGG	1 cut(s)	11
SgrBI	CCGCGG	1 cut(s)	11
SinI	GGWCC	1 cut(s)	386
SmaI	CCCGGG	1 cut(s)	1644
SmiMI	CAYNNNNRTG	5 cut(s)	630, 1152, 1545, 1892, 2021
SmlI	CTYRAG	1 cut(s)	1923
SmoI	CTYRAG	1 cut(s)	1923
SpeI	ACTAGT	2 cut(s)	434, 1040
SseBI	AGGCCT	1 cut(s)	1831
SsiI	CCGC	6 cut(s)	8, 10, 115, 1523, 1526, 1990
SspI	AATATT	2 cut(s)	183, 2072
SspMI	CTAG	5 cut(s)	435, 771, 819, 1041, 1188
SstI	GAGCTC	2 cut(s)	49, 1625
StuI	AGGCCT	1 cut(s)	1831
StyD4I	CCNGG	9 cut(s)	496, 1013, 1099, 1203, 1368, 1610, 1641, 1642, 1720
StyI	CCWWGG	5 cut(s)	527, 625, 644, 805, 1121
TaaI	ACNGT	5 cut(s)	245, 1002, 1073, 1258, 1393
TaiI	ACGT	2 cut(s)	75, 880
TaqI	TCGA	5 cut(s)	78, 333, 477, 853, 1555
TatI	WGTACW	1 cut(s)	1230
TauI	GCSGC	4 cut(s)	10, 13, 1525, 1528
TfiI	GAWTC	6 cut(s)	28, 167, 717, 1025, 1873, 2000
Tru1I	TTAA	7 cut(s)	536, 669, 1128, 1242, 1713, 1802, 1995
Tru9I	TTAA	7 cut(s)	536, 669, 1128, 1242, 1713, 1802, 1995
TscAI	CASTG	5 cut(s)	231, 1015, 1165, 1510, 1522
TseFI	GTSAC	4 cut(s)	245, 722, 1156, 2076
Tsp45I	GTSAC	4 cut(s)	245, 722, 1156, 2076
TspDTI	ATGAA	4 cut(s)	179, 617, 941, 1751
TspMI	CCCGGG	1 cut(s)	1642
TspRI	CASTG	5 cut(s)	231, 1015, 1165, 1510, 1522
Tth111I	GACNNNGTC	1 cut(s)	74
Van91I	CCANNNNNTGG	2 cut(s)	713, 1014
VpaK11BI	GGWCC	1 cut(s)	386
XagI	CCTNNNNNAGG	1 cut(s)	1101
XapI	RAATTY	2 cut(s)	197, 1347
XceI	RCATGY	3 cut(s)	1532, 1902, 2020
XcmI	CCANNNNNNNNNTGG	3 cut(s)	287, 525, 1332
XmaI	CCCGGG	1 cut(s)	1642
XmiI	GTMKAC	2 cut(s)	1533, 1815
XmnI	GAANNNNTTC	1 cut(s)	577
XspI	CTAG	5 cut(s)	435, 771, 819, 1041, 1188
Zsp2I	ATGCAT	2 cut(s)	403, 1732

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.