AT3G18230

Octicosapeptide Phox Bem1p

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0011787
Physical Location & Seq
Forward (+)
6251315 .. 6254221
2907 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G18230.1

Sequence Viewer

Length: 2001 bp
ATGGAGACCCCACTCCCTCCTTTATCGCAACTAACCCCAAATCCTACTCCCGCCGCCGCCGTCTCTTCCGCTATTCCGGCGCCAGTTAAGAGCGTAGCCGTTCAGCAACCGATCGATGGATCTCCACGCGCCGTTGCTACTGATACCGGAGGTATTCCTGAGCCACTTGCGGCTGTTCCCGGCGCTAAGCTTCGTCTTATGTGCAGTTTTGGTGGCCACATCATGCCTCGTCCACACGACAAATCGTTGACGTACTCCGGCGGCGAGACTCGTATTGTGGTTGTTGATCGACGTGCGTCACTGTCTTCGCTCCGATCTCGTCTCTCTAGTATGCTTCTCAACGGCCGGTCCTTTACTCTCAAGTACCAGCTCCCTAGCGAAGATCTCGATTCACTCGTCACCATCACTACCGATGAAGATCTGGAGAACATGATCGAGGAATACGATCGCGCGGCTTCGTCAGCGACGGCGACTGCTACGCAACGGCTCCGGTTGTTCCTTTTCGCTAACAAGCTCGAGACCGCCGCTACTATGGGATCTCTGCTTGACGGCACGAAATCTGACACATGGTTCGTCGATGCTCTGAATCAATCTGGTTTGCTTCCTCGTGGTTTATCAGATTCCGCCGCCGTGAATAATACCTTGGTGAATCTCGACGAAGCTAGCGGCGGAGAGACCGAGATCCAAAACCTTGAAACTAATGTTGGTGGCGAGAACAATAAGCGAGGGGATTTGGTTGCTAACGGTGTGATTTCGCATCAGGAGATGCATATGAGCTCGATGCCTGATTCTCCAATGATGGAAGCCGCTGGTTCTTCGATAGGATCTTCTTCTTCATCTCCTTCCACATCCAATTTGCCACCGATTCGCGTTAGAGTCAGTGAGGACCAGAGGATAGAGGAACAATTGGCACAGATGACCTTCTCAAACATGCAAACTCAGAGGCAATTTGATGATGGCGTTAGCTTGATGGCAAATCGGCCAATGATGATTCCACCTGGTGCCATGAACGATGCTGCGATGGCGTATAACAACGCACCTGGTGATGGTACTGCTCCCGCAAGCAATGGCCATGTCTCACCTGAAGACGATCGATCCGAATTAGGTGTATCAACTGGCTACAGGAAGCCACCTTTGCCGATGCAACCAGTAACGATCCCACCTAGAACTGTTGGAGGCTATGGCTTGACATCCCCTGATTCTGTTGCAAGTGATACTAGCATTTCTTCTGCTACTTCATTTTCAAAGCCGATGTACTACCAAGACCAACCTCCAGCTCTGCCAAGAGCTCCTCCAGTGGCACAGCCTGAAACCACCTCGGCCCAAAGCTCTCAAGTCTTACCTCAGACTGAAAACACTTCAGCCCAAACCACCTCCCATGTCTTATCTCAGCCAGGTACGTACACAACTATGGATCAACAACAACAACAACCTCTGGCTCAACAACCTTTCTTACACCAAGGCGTTCAGTATATCCCTCACCCATCACAATACATACCAATTTACTCTCATCAGCAACAAAACTACCCTGTTTACGTGATGTCCGTCCCACAATCTCAGCAGTATATCCCAGCAGGAACTCCCCCGCTCTACCCGAACTCAAAACCCGGCACAAACTCGAGACCTGAAGCTGCCCAGAACGTTTACCGAGCTGCTCCCCCTCAGGTTATTCAGCTTCAGCAACAGCATCAGTACATGGGTTACGCTGGAGCTCCTCAACATAGCACAAACGCAAACGCCAATTACGGTACTGGAGCTCCTCAACATAGCACAAACGCAAACGCCAACTACGGTGGACCCTTTGAATACACAAACTCTCCAAACGAGACAGTGTATTACCACACACAAGCTCCTGCTGCAAACACTGCCATTCCATTAGCGTCTCCATACCAAAGCATGACACCAGCAGCAGCCGCAGCAGCTCTAGCCGATATGTCCAAGCAAATGGCTCTTGACGGCGGCAAACAGCAACAGCATATGGCTGCGTCTCAGCCGCTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PB1

Protein Analysis

666

Amino Acids

70.99

Weight (kDa)

5.19

Isoelectric Point (pI)

55.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PB1 PF00564 79 - 168 3.8e-17 PB1 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011787)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G18230
fragaria_vesca FvH4_5g16730
malus_domestica MD06G1221200.v1.1 MD14G1230400.v1.1
prunus_persica Prupe.5G225400_v2.0.a1 Prupe.5G225400_v2.0.a1 Prupe.5G225400_v2.0.a1
pyrus_communis pycom14g19170
rosa_chinensis RchiOBHm_Chr7g0179361
rosa_laevigata RLG00000005362
rosa_multiflora Rmu_co8118088.1_g000001 Rmu_sc0019996.1_g000002
rosa_roxburghii Rroxscaffold_3G00274090
rosa_rugosa Rorug06G0423800.1
rosa_samantha Rh7AG023200 Rh7BG022800 Rh7CG024100 Rh7DG023600
rosa_wichuraiana Rw7G001870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 79, 1001
AccBSI CCGCTC 1 cut(s) 1588
AccII CGCG 4 cut(s) 129, 450, 452, 870
AclI AACGTT 1 cut(s) 1641
AclWI GGATC 7 cut(s) 127, 544, 676, 832, 1089, 1150, 1422
AcoI YGGCCR 4 cut(s) 214, 343, 980, 1069
AcuI CTGAAG 4 cut(s) 1104, 1344, 1647, 1661
AcyI GRCGYC 1 cut(s) 80
AdeI CACNNNGTG 2 cut(s) 1001, 1043
AfaI GTAC 8 cut(s) 254, 365, 1051, 1256, 1399, 1403, 1694, 1750
AfiI CCNNNNNNNGG 2 cut(s) 116, 1046
AgsI TTSAA 3 cut(s) 695, 1245, 1805
AjiI CACGTC 1 cut(s) 293
AjnI CCWGG 3 cut(s) 997, 1039, 1393
AjuI GAANNNNNNNTTGG 4 cut(s) 626, 658, 687, 719
Alw21I GWGCWC 4 cut(s) 779, 1291, 1714, 1759
AlwI GGATC 7 cut(s) 127, 544, 676, 832, 1089, 1150, 1422
Ama87I CYCGRG 2 cut(s) 515, 1618
AoxI GGCC 5 cut(s) 214, 343, 980, 1069, 1320
ApeKI GCWGC 9 cut(s) 1016, 1631, 1652, 1856, 1907, 1910, 1916, 1919, 1982
ArsI GACNNNNNNTTYG 2 cut(s) 554, 586
AspLEI GCGC 4 cut(s) 82, 131, 185, 452
AspS9I GGNCC 4 cut(s) 348, 886, 1321, 1796
AsuC2I CCSGG 2 cut(s) 180, 1608
AsuHPI GGTGA 5 cut(s) 391, 658, 1055, 1071, 1472
AsuNHI GCTAGC 1 cut(s) 662
AvaI CYCGRG 2 cut(s) 515, 1618
AvaII GGWCC 3 cut(s) 348, 886, 1796
AxyI CCTNAGG 1 cut(s) 1662
BalI TGGCCA 2 cut(s) 216, 1071
BanI GGYRCC 2 cut(s) 79, 1001
BanII GRGCYC 4 cut(s) 779, 1291, 1714, 1759
BauI CACGAG 1 cut(s) 606
BbsI GAAGAC 2 cut(s) 297, 1092
Bbv12I GWGCWC 4 cut(s) 779, 1291, 1714, 1759
BbvI GCAGC 9 cut(s) 1003, 1618, 1639, 1843, 1919, 1922, 1928, 1931, 1969
BccI CCATC 8 cut(s) 110, 410, 793, 950, 964, 1015, 1040, 1492
BceAI ACGGC 9 cut(s) 44, 83, 116, 358, 483, 500, 565, 614, 1972
BciT130I CCWGG 3 cut(s) 999, 1041, 1395
BcnI CCSGG 2 cut(s) 180, 1608
BfaI CTAG 6 cut(s) 327, 375, 663, 1164, 1218, 1925
BfmI CTRYAG 1 cut(s) 1120
BfoI RGCGCY 2 cut(s) 83, 186
BglII AGATCT 2 cut(s) 382, 418
BlpI GCTNAGC 1 cut(s) 186
Bme1390I CCNGG 5 cut(s) 180, 999, 1041, 1395, 1608
Bme18I GGWCC 3 cut(s) 348, 886, 1796
BmeT110I CYCGRG 2 cut(s) 515, 1618
BmgBI CACGTC 1 cut(s) 293
BmgT120I GGNCC 4 cut(s) 348, 886, 1321, 1796
BmiI GGNNCC 4 cut(s) 81, 488, 1003, 1798
BmrFI CCNGG 5 cut(s) 180, 999, 1041, 1395, 1608
BmsI GCATC 7 cut(s) 568, 756, 766, 771, 1003, 1131, 1696
BmtI GCTAGC 1 cut(s) 666
BoxI GACNNNNGTC 1 cut(s) 295
BpiI GAAGAC 2 cut(s) 297, 1092
BpmI CTGGAG 5 cut(s) 443, 1257, 1278, 1728, 1773
Bpu10I CCTNAGC 1 cut(s) 159
Bpu1102I GCTNAGC 1 cut(s) 186
BpuEI CTTGAG 2 cut(s) 344, 1317
BpuMI CCSGG 2 cut(s) 180, 1608
Bsa29I ATCGAT 2 cut(s) 114, 1093
BsaAI YACGTR 2 cut(s) 1401, 1537
BsaBI GATNNNNATC 1 cut(s) 417
BsaHI GRCGYC 1 cut(s) 80
BsaI GGTCTC 3 cut(s) 512, 668, 1615
BsaJI CCNNGG 3 cut(s) 642, 1317, 1459
BsaWI WCCGGW 2 cut(s) 146, 489
BsaXI ACNNNNNCTCC 6 cut(s) 1741, 1771, 1801, 1831, 1834, 1864
Bsc4I CCNNNNNNNGG 2 cut(s) 116, 1046
Bse118I RCCGGY 1 cut(s) 345
Bse1I ACTGG 5 cut(s) 83, 1120, 1148, 1295, 1756
Bse21I CCTNAGG 1 cut(s) 1662
Bse3DI GCAATG 1 cut(s) 1072
Bse8I GATNNNNATC 1 cut(s) 417
BseBI CCWGG 3 cut(s) 999, 1041, 1395
BseCI ATCGAT 2 cut(s) 114, 1093
BseDI CCNNGG 3 cut(s) 642, 1317, 1459
BseGI GGATG 2 cut(s) 848, 1190
BseJI GATNNNNATC 1 cut(s) 417
BseLI CCNNNNNNNGG 2 cut(s) 116, 1046
BseMI GCAATG 1 cut(s) 1072
BseMII CTCAG 6 cut(s) 150, 953, 1358, 1403, 1571, 1676
BseNI ACTGG 5 cut(s) 83, 1120, 1148, 1295, 1756
BseRI GAGGAG 3 cut(s) 1281, 1704, 1749
BseX3I CGGCCG 1 cut(s) 343
BseXI GCAGC 9 cut(s) 1003, 1618, 1639, 1843, 1919, 1922, 1928, 1931, 1969
BseYI CCCAGC 1 cut(s) 1570
BsgI GTGCAG 1 cut(s) 223
Bsh1236I CGCG 4 cut(s) 129, 450, 452, 870
Bsh1285I CGRYCG 4 cut(s) 114, 346, 448, 1093
BshFI GGCC 5 cut(s) 216, 345, 982, 1071, 1322
BshNI GGYRCC 2 cut(s) 79, 1001
BshVI ATCGAT 2 cut(s) 114, 1093
BsiEI CGRYCG 4 cut(s) 114, 346, 448, 1093
BsiHKAI GWGCWC 4 cut(s) 779, 1291, 1714, 1759
BsiHKCI CYCGRG 2 cut(s) 515, 1618
BsiSI CCGG 7 cut(s) 77, 147, 180, 258, 346, 490, 1608
BslFI GGGAC 1 cut(s) 1532
BslI CCNNNNNNNGG 2 cut(s) 116, 1046
BsmBI CGTCTC 4 cut(s) 67, 326, 1887, 1992
BsmFI GGGAC 1 cut(s) 1532
BsnI GGCC 5 cut(s) 216, 345, 982, 1071, 1322
Bso31I GGTCTC 3 cut(s) 512, 668, 1615
BsoBI CYCGRG 2 cut(s) 515, 1618
Bsp1286I GDGCHC 4 cut(s) 779, 1291, 1714, 1759
Bsp1720I GCTNAGC 1 cut(s) 186
BspANI GGCC 5 cut(s) 216, 345, 982, 1071, 1322
BspCNI CTCAG 6 cut(s) 151, 952, 1357, 1402, 1570, 1675
BspDI ATCGAT 2 cut(s) 114, 1093
BspFNI CGCG 4 cut(s) 129, 450, 452, 870
BspLI GGNNCC 4 cut(s) 81, 488, 1003, 1798
BspOI GCTAGC 1 cut(s) 666
BspPI GGATC 7 cut(s) 127, 544, 676, 832, 1089, 1150, 1422
BspT107I GGYRCC 2 cut(s) 79, 1001
BspTNI GGTCTC 3 cut(s) 512, 668, 1615
BsrBI CCGCTC 1 cut(s) 1588
BsrDI GCAATG 1 cut(s) 1072
BsrFI RCCGGY 1 cut(s) 345
BsrI ACTGG 5 cut(s) 83, 1120, 1148, 1295, 1756
BssAI RCCGGY 1 cut(s) 345
BssECI CCNNGG 3 cut(s) 642, 1317, 1459
BssNI GRCGYC 1 cut(s) 80
BssSI CACGAG 1 cut(s) 606
BssT1I CCWWGG 2 cut(s) 642, 1459
Bst2BI CACGAG 1 cut(s) 606
Bst2UI CCWGG 3 cut(s) 999, 1041, 1395
Bst4CI ACNGT 6 cut(s) 303, 746, 1171, 1748, 1793, 1831
Bst6I CTCTTC 1 cut(s) 70
BstACI GRCGYC 1 cut(s) 80
BstAPI GCANNNNNTGC 1 cut(s) 1865
BstBAI YACGTR 2 cut(s) 1401, 1537
BstC8I GCNNGC 2 cut(s) 664, 1063
BstDEI CTNAG 8 cut(s) 159, 186, 939, 1344, 1389, 1557, 1662, 1989
BstF5I GGATG 2 cut(s) 848, 1190
BstFNI CGCG 4 cut(s) 129, 450, 452, 870
BstH2I RGCGCY 2 cut(s) 83, 186
BstHHI GCGC 4 cut(s) 82, 131, 185, 452
BstMCI CGRYCG 4 cut(s) 114, 346, 448, 1093
BstNI CCWGG 3 cut(s) 999, 1041, 1395
BstNSI RCATGY 1 cut(s) 934
BstPAI GACNNNNGTC 1 cut(s) 295
BstSCI CCNGG 5 cut(s) 178, 997, 1039, 1393, 1606
BstSFI CTRYAG 1 cut(s) 1120
BstSNI TACGTA 1 cut(s) 1401
BstUI CGCG 4 cut(s) 129, 450, 452, 870
BstV1I GCAGC 9 cut(s) 1003, 1618, 1639, 1843, 1919, 1922, 1928, 1931, 1969
BstV2I GAAGAC 2 cut(s) 297, 1092
BstX2I RGATCY 6 cut(s) 119, 382, 418, 536, 681, 824
BstXI CCANNNNNNTGG 1 cut(s) 1945
BstYI RGATCY 6 cut(s) 119, 382, 418, 536, 681, 824
BstZI CGGCCG 1 cut(s) 343
Bsu15I ATCGAT 2 cut(s) 114, 1093
Bsu36I CCTNAGG 1 cut(s) 1662
BsuRI GGCC 5 cut(s) 216, 345, 982, 1071, 1322
BsuTUI ATCGAT 2 cut(s) 114, 1093
BtgZI GCGATG 1 cut(s) 1034
BtrI CACGTC 1 cut(s) 293
BtsCI GGATG 2 cut(s) 848, 1190
BtsI GCAGTG 1 cut(s) 1863
BtsIMutI CAGTG 5 cut(s) 299, 886, 1302, 1836, 1863
Cac8I GCNNGC 2 cut(s) 664, 1063
CfoI GCGC 4 cut(s) 82, 131, 185, 452
Cfr10I RCCGGY 1 cut(s) 345
Cfr13I GGNCC 4 cut(s) 348, 886, 1321, 1796
ClaI ATCGAT 2 cut(s) 114, 1093
CseI GACGC 3 cut(s) 285, 1869, 1974
CsiI ACCWGGT 2 cut(s) 997, 1039
Csp6I GTAC 8 cut(s) 253, 364, 1050, 1255, 1398, 1402, 1693, 1749
CspCI CAANNNNNGTGG 2 cut(s) 1774, 1809
CviAII CATG 9 cut(s) 223, 430, 567, 931, 1006, 1073, 1379, 1696, 1897
CviQI GTAC 8 cut(s) 253, 364, 1050, 1255, 1398, 1402, 1693, 1749
DdeI CTNAG 8 cut(s) 159, 186, 939, 1344, 1389, 1557, 1662, 1989
DinI GGCGCC 1 cut(s) 81
DraIII CACNNNGTG 2 cut(s) 1001, 1043
EaeI YGGCCR 4 cut(s) 214, 343, 980, 1069
EagI CGGCCG 1 cut(s) 343
Eam1104I CTCTTC 1 cut(s) 70
EarI CTCTTC 1 cut(s) 70
EciI GGCGGA 2 cut(s) 613, 684
Ecl136II GAGCTC 4 cut(s) 777, 1289, 1712, 1757
EclXI CGGCCG 1 cut(s) 343
Eco105I TACGTA 1 cut(s) 1401
Eco130I CCWWGG 2 cut(s) 642, 1459
Eco24I GRGCYC 4 cut(s) 779, 1291, 1714, 1759
Eco31I GGTCTC 3 cut(s) 512, 668, 1615
Eco47I GGWCC 3 cut(s) 348, 886, 1796
Eco52I CGGCCG 1 cut(s) 343
Eco53kI GAGCTC 4 cut(s) 777, 1289, 1712, 1757
Eco57I CTGAAG 4 cut(s) 1104, 1344, 1647, 1661
Eco81I CCTNAGG 1 cut(s) 1662
Eco88I CYCGRG 2 cut(s) 515, 1618
EcoICRI GAGCTC 4 cut(s) 777, 1289, 1712, 1757
EcoRII CCWGG 3 cut(s) 997, 1039, 1393
EcoT14I CCWWGG 2 cut(s) 642, 1459
EcoT22I ATGCAT 1 cut(s) 771
EcoT38I GRGCYC 4 cut(s) 779, 1291, 1714, 1759
EgeI GGCGCC 1 cut(s) 81
EheI GGCGCC 1 cut(s) 81
ErhI CCWWGG 2 cut(s) 642, 1459
Esp3I CGTCTC 4 cut(s) 67, 326, 1887, 1992
FaeI CATG 9 cut(s) 226, 433, 570, 934, 1009, 1076, 1382, 1699, 1900
FaqI GGGAC 1 cut(s) 1532
FatI CATG 9 cut(s) 222, 429, 566, 930, 1005, 1072, 1378, 1695, 1896
FauI CCCGC 3 cut(s) 58, 1066, 1593
FauNDI CATATG 2 cut(s) 771, 1977
FokI GGATG 2 cut(s) 835, 1177
FriOI GRGCYC 4 cut(s) 779, 1291, 1714, 1759
FspBI CTAG 6 cut(s) 327, 375, 663, 1164, 1218, 1925
GlaI GCGC 4 cut(s) 81, 130, 184, 451
GsaI CCCAGC 1 cut(s) 1574
GsuI CTGGAG 5 cut(s) 443, 1257, 1278, 1728, 1773
HaeII RGCGCY 2 cut(s) 83, 186
HaeIII GGCC 5 cut(s) 216, 345, 982, 1071, 1322
HapII CCGG 7 cut(s) 77, 147, 180, 258, 346, 490, 1608
HgaI GACGC 3 cut(s) 285, 1869, 1974
HhaI GCGC 4 cut(s) 82, 131, 185, 452
Hin1I GRCGYC 1 cut(s) 80
Hin1II CATG 9 cut(s) 226, 433, 570, 934, 1009, 1076, 1382, 1699, 1900
Hin6I GCGC 4 cut(s) 80, 129, 183, 450
HinP1I GCGC 4 cut(s) 80, 129, 183, 450
HincII GTYRAC 1 cut(s) 249
HindII GTYRAC 1 cut(s) 249
HindIII AAGCTT 1 cut(s) 188
HpaII CCGG 7 cut(s) 77, 147, 180, 258, 346, 490, 1608
HphI GGTGA 5 cut(s) 391, 658, 1055, 1071, 1472
Hpy166II GTNNAC 6 cut(s) 233, 249, 1404, 1534, 1645, 1796
Hpy188I TCNGA 7 cut(s) 314, 562, 585, 619, 942, 1099, 1347
Hpy188III TCNNGA 8 cut(s) 158, 386, 422, 517, 653, 761, 1620, 1952
Hpy8I GTNNAC 6 cut(s) 233, 249, 1404, 1534, 1645, 1796
Hpy99I CGWCG 4 cut(s) 294, 469, 578, 659
HpyAV CCTTC 2 cut(s) 852, 931
HpyCH4III ACNGT 6 cut(s) 303, 746, 1171, 1748, 1793, 1831
HpyCH4IV ACGT 5 cut(s) 251, 292, 1400, 1536, 1641
HpyCH4V TGCA 6 cut(s) 204, 769, 934, 1144, 1208, 1859
HpyF3I CTNAG 8 cut(s) 159, 186, 939, 1344, 1389, 1557, 1662, 1989
HpySE526I ACGT 5 cut(s) 251, 292, 1400, 1536, 1641
Hsp92I GRCGYC 1 cut(s) 80
Hsp92II CATG 9 cut(s) 226, 433, 570, 934, 1009, 1076, 1382, 1699, 1900
HspAI GCGC 4 cut(s) 80, 129, 183, 450
KasI GGCGCC 1 cut(s) 79
Lsp1109I GCAGC 9 cut(s) 1003, 1618, 1639, 1843, 1919, 1922, 1928, 1931, 1969
LweI GCATC 7 cut(s) 568, 756, 766, 771, 1003, 1131, 1696
MabI ACCWGGT 2 cut(s) 997, 1039
MaeI CTAG 6 cut(s) 327, 375, 663, 1164, 1218, 1925
MaeII ACGT 5 cut(s) 251, 292, 1400, 1536, 1641
MaeIII GTNAC 4 cut(s) 297, 397, 1150, 1700
MbiI CCGCTC 1 cut(s) 1588
MfeI CAATTG 1 cut(s) 905
MflI RGATCY 6 cut(s) 119, 382, 418, 536, 681, 824
MhlI GDGCHC 4 cut(s) 779, 1291, 1714, 1759
MlsI TGGCCA 2 cut(s) 216, 1071
MluCI AATT 6 cut(s) 853, 905, 947, 1100, 1500, 1741
MluNI TGGCCA 2 cut(s) 216, 1071
Mly113I GGCGCC 1 cut(s) 80
MlyI GAGTC 2 cut(s) 262, 885
MmeI TCCRAC 1 cut(s) 1153
Mox20I TGGCCA 2 cut(s) 216, 1071
Mph1103I ATGCAT 1 cut(s) 771
MscI TGGCCA 2 cut(s) 216, 1071
MseI TTAA 2 cut(s) 87, 1999
MslI CAYNNNNRTG 1 cut(s) 1409
Msp20I TGGCCA 2 cut(s) 216, 1071
MspA1I CMGCKG 1 cut(s) 809
MspI CCGG 7 cut(s) 77, 147, 180, 258, 346, 490, 1608
MspR9I CCNGG 5 cut(s) 180, 999, 1041, 1395, 1608
MunI CAATTG 1 cut(s) 905
MvaI CCWGG 3 cut(s) 999, 1041, 1395
MvnI CGCG 4 cut(s) 129, 450, 452, 870
NarI GGCGCC 1 cut(s) 80
NciI CCSGG 2 cut(s) 180, 1608
NdeI CATATG 2 cut(s) 771, 1977
NheI GCTAGC 1 cut(s) 662
NlaIII CATG 9 cut(s) 226, 433, 570, 934, 1009, 1076, 1382, 1699, 1900
NlaIV GGNNCC 4 cut(s) 81, 488, 1003, 1798
NmeAIII GCCGAG 1 cut(s) 1298
NmuCI GTSAC 2 cut(s) 297, 397
NsiI ATGCAT 1 cut(s) 771
NspI RCATGY 1 cut(s) 934
PaeR7I CTCGAG 2 cut(s) 515, 1618
PcsI WCGNNNNNNNCGW 4 cut(s) 393, 441, 1095, 1542
PfeI GAWTC 8 cut(s) 389, 586, 620, 649, 788, 865, 991, 1199
Ple19I CGATCG 3 cut(s) 114, 448, 1093
PleI GAGTC 2 cut(s) 262, 884
PluTI GGCGCC 1 cut(s) 83
PpsI GAGTC 2 cut(s) 262, 884
Ppu21I YACGTR 2 cut(s) 1401, 1537
PshAI GACNNNNGTC 1 cut(s) 295
Psp124BI GAGCTC 4 cut(s) 779, 1291, 1714, 1759
Psp1406I AACGTT 1 cut(s) 1641
Psp6I CCWGG 3 cut(s) 997, 1039, 1393
PspFI CCCAGC 1 cut(s) 1570
PspGI CCWGG 3 cut(s) 997, 1039, 1393
PspN4I GGNNCC 4 cut(s) 81, 488, 1003, 1798
PspPI GGNCC 4 cut(s) 348, 886, 1321, 1796
PsuI RGATCY 6 cut(s) 119, 382, 418, 536, 681, 824
PvuI CGATCG 3 cut(s) 114, 448, 1093
RsaI GTAC 8 cut(s) 254, 365, 1051, 1256, 1399, 1403, 1694, 1750
RsaNI GTAC 8 cut(s) 253, 364, 1050, 1255, 1398, 1402, 1693, 1749
RseI CAYNNNNRTG 1 cut(s) 1409
SacI GAGCTC 4 cut(s) 779, 1291, 1714, 1759
SaqAI TTAA 2 cut(s) 87, 1999
Sau96I GGNCC 4 cut(s) 348, 886, 1321, 1796
SchI GAGTC 2 cut(s) 262, 885
ScrFI CCNGG 5 cut(s) 180, 999, 1041, 1395, 1608
SduI GDGCHC 4 cut(s) 779, 1291, 1714, 1759
SexAI ACCWGGT 2 cut(s) 997, 1039
SfaNI GCATC 7 cut(s) 568, 756, 766, 771, 1003, 1131, 1696
SfcI CTRYAG 1 cut(s) 1120
SfoI GGCGCC 1 cut(s) 81
Sfr274I CTCGAG 2 cut(s) 515, 1618
SinI GGWCC 3 cut(s) 348, 886, 1796
SlaI CTCGAG 2 cut(s) 515, 1618
SmiMI CAYNNNNRTG 1 cut(s) 1409
SmlI CTYRAG 4 cut(s) 359, 515, 1332, 1618
SmoI CTYRAG 4 cut(s) 359, 515, 1332, 1618
SnaBI TACGTA 1 cut(s) 1401
Sse9I AATT 6 cut(s) 853, 905, 947, 1100, 1500, 1741
SspDI GGCGCC 1 cut(s) 79
SspMI CTAG 6 cut(s) 327, 375, 663, 1164, 1218, 1925
SstI GAGCTC 4 cut(s) 779, 1291, 1714, 1759
StyD4I CCNGG 5 cut(s) 178, 997, 1039, 1393, 1606
StyI CCWWGG 2 cut(s) 642, 1459
TaaI ACNGT 6 cut(s) 303, 746, 1171, 1748, 1793, 1831
TaiI ACGT 5 cut(s) 254, 295, 1403, 1539, 1644
TaqII GACCGA 1 cut(s) 692
TasI AATT 6 cut(s) 853, 905, 947, 1100, 1500, 1741
TatI WGTACW 2 cut(s) 1254, 1692
TfiI GAWTC 8 cut(s) 389, 586, 620, 649, 788, 865, 991, 1199
Tru1I TTAA 2 cut(s) 87, 1999
Tru9I TTAA 2 cut(s) 87, 1999
TscAI CASTG 5 cut(s) 306, 886, 1302, 1836, 1870
TseFI GTSAC 2 cut(s) 297, 397
TseI GCWGC 9 cut(s) 1016, 1631, 1652, 1856, 1907, 1910, 1916, 1919, 1982
Tsp45I GTSAC 2 cut(s) 297, 397
TspDTI ATGAA 4 cut(s) 429, 825, 1022, 1227
TspGWI ACGGA 1 cut(s) 1534
TspRI CASTG 5 cut(s) 306, 886, 1302, 1836, 1870
VpaK11BI GGWCC 3 cut(s) 348, 886, 1796
XceI RCATGY 1 cut(s) 934
XhoI CTCGAG 2 cut(s) 515, 1618
XspI CTAG 6 cut(s) 327, 375, 663, 1164, 1218, 1925
Zsp2I ATGCAT 1 cut(s) 771
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.