FvH4_5g16730

PB1 domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0011787
Physical Location & Seq
Reverse (-)
9551541 .. 9554503
2963 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g16730.t1

Sequence Viewer

Length: 2070 bp
ATGGATCCATCACCTCTCCCACCACTCCCGGCCGCCGCAACCGCCACGGCTGCCTCCGTGCAACTCAGCTACCCGGACTCACTCGAATCCTCCCCCCGATCCCGCAATGCGGACGCTGCTTGGGACGTCGAGCCTCTCCCTCAGGTCCCCGGCGCCAAGCTCCGGCTCATGTGCAGCTACGGCGGCCACATCATCCCTCGGCCGCACGACAAGTCGCTCTGCTACGTCGGCGGCGAGACTCGCATTATCGTCGTGGACCGCCACTCCTCACTCTCCGACCTCTGCTCCCGCCTCTCCCGGACGCTCCTCAACGGCCGCCCGTTCTCGCTCAAGTACCAGCTCCCGACGGAGGACCTCGACTCGCTCATCTCCGTCACCACCGACGAGGATCTCGAGAACATGGTGGAGGAGTACGAGCGCACCACCTCGTCGGCGTCGCCGTTAAAGCCGTCGTCGAGGATCCGTCTATTCCTCTTCTTCGGCAAGCCGGAGACGACGGCGTCCATGGGGGCTCTGCTCCACGAAGCCAAGTCCGATTCGTGGTTCGTCGACGCGCTCAACGGCTCTGGTATGCTGCCGCGGAATTTGTCCGACTCGGCCGCGACCATGGACTGCTTGTTGACCGGCGGGAGTGACTCTTGTAACGACTTGGAGGCGGCGGCGGCGAATCAGGGCGACTTCTTCGGGGATCATGGTAGTGGAAAACCTAATGTGGCGGTGCCTGAAGTGCATTCGATTTCGGATTCGGCGTTTGTGGAGAACAATACGTCGTCGTCTGGATCGTCTACTTCGTCGTCTTGCTTGGCCAATTTGCCCCAAATTAAGGTTAGAGTGGATGGAAATGTGGCTGGAGTAGTGCAAGGTCAGAAGCCAGCTGGCATTGAGGAGCAGTTCGCTCAGATAAGCTTGGTTGCTGCTGCTCCTGTGGCTGTAAACTCTGGAGCTGGTGAAACTATGAACAGGATCAACTCGGAGGATGATATTTCGGCACAGAATGTGCCTGTCGCGTTTCGAAAACCGCCTTTGCCAATGCCGTTGCAGCCTCAGCATTTCAAGCATGGTGGTGGTGGAGGTGGAGGTTATAGCTTGCCTTCACCGGATTCAGTTGCAAGTGATAGTAGCATTGCGTCTGCAAACTCTCTGTCAAAACCAATGTACTATCAAGAGCAAGTTCAAGTTGTAGCTAGAGAGGCCAGAGGTCCTGTTAGCCCGCCAAGTGATACTTCAGATCAGGGTTCCCGAAACCAAGTTCAGGATTCAGGGTACAGTATTCCTCCACAATCAGATCAACAACAGCAAAATCAGCTTCAGCAACAACAGCAGCAACAACAACAACTGTTACAGCAGCAGCATCAGCAGCAACAACAGCTCCAACAGCAGCATCTCCAGCAGCAGCAACAGCAGCAACAACAATTTGTCCATGCAAGCGCGCAATATATGAATATTCAGCACCCTGTTACTGGTCAAGTGCCAGTGTCACCTTACTACACAATGTATGCTCCTCCATCGCAGCAGCAACAACTTCATCACCAAATTGATCATCAGCAGCAGTATCCTGTCTATATAATGCCTGTTCCACAGTCGCAACAACCATACAAGATGGCTCTGCAGTCTAATATAGCCGATCCAACTGTTGTTGCCTCGACCCACATTACCTCCCATAACCCTGCTGCTTACAAGGACAGTATCCCACCCATTTATCCCCCAAAGACAGCTTCACCTGCTATGACCGAAATGACTCAAAGTCTTTACCAAACCTCTGTGACACCAACTCCTCAATTAGTCCAAATCCCTTCCGGGCAATATCAGCAGCAGTTTGTTGGTTACTCAATGCATCATCCATCTCAATCCATTACTGTTCCTTCCTCTACGACAGCACCCAACTATGCTTATGAATATGCCAATCCTTCACATGAACAAGTATTCTACACTCAGCATCAAGCATCCCCATTGCCTCAATACCAATCCATGACTCCAGCAGCCGCAGCCGCAGCAGTAGCAATGTCAGATGAAGCAAAGCAGGTAGCCTCATCATACCCAACAGCGGATCAAAGCCACACACCACCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PB1

Protein Analysis

690

Amino Acids

74.52

Weight (kDa)

5.3

Isoelectric Point (pI)

67.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PB1 PF00564 69 - 159 1.3e-17 PB1 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011787)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G18230
fragaria_vesca FvH4_5g16730
malus_domestica MD06G1221200.v1.1 MD14G1230400.v1.1
prunus_persica Prupe.5G225400_v2.0.a1 Prupe.5G225400_v2.0.a1 Prupe.5G225400_v2.0.a1
pyrus_communis pycom14g19170
rosa_chinensis RchiOBHm_Chr7g0179361
rosa_laevigata RLG00000005362
rosa_multiflora Rmu_co8118088.1_g000001 Rmu_sc0019996.1_g000002
rosa_roxburghii Rroxscaffold_3G00274090
rosa_rugosa Rorug06G0423800.1
rosa_samantha Rh7AG023200 Rh7BG022800 Rh7CG024100 Rh7DG023600
rosa_wichuraiana Rw7G001870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1729
AasI GACNNNNNNGTC 1 cut(s) 499
AatII GACGTC 1 cut(s) 129
Acc36I ACCTGC 2 cut(s) 1729, 2011
AccB1I GGYRCC 2 cut(s) 152, 718
AccI GTMKAC 2 cut(s) 549, 785
AccII CGCG 5 cut(s) 554, 580, 602, 1007, 1430
AcoI YGGCCR 6 cut(s) 30, 184, 200, 313, 597, 804
AcsI RAATTY 1 cut(s) 583
AcuI CTGAAG 3 cut(s) 744, 1209, 1292
AcyI GRCGYC 4 cut(s) 126, 153, 434, 500
AfaI GTAC 4 cut(s) 335, 413, 1157, 1265
AfiI CCNNNNNNNGG 8 cut(s) 109, 162, 349, 540, 823, 1252, 1460, 2044
AgsI TTSAA 2 cut(s) 1054, 1175
AhdI GACNNNNNGTC 1 cut(s) 1743
AjuI GAANNNNNNNTTGG 4 cut(s) 1207, 1239, 1699, 1731
Alw26I GTCTC 2 cut(s) 230, 485
Ama87I CYCGRG 1 cut(s) 392
AoxI GGCC 7 cut(s) 30, 184, 200, 313, 597, 804, 1191
ApoI RAATTY 1 cut(s) 583
ArsI GACNNNNNNTTYG 2 cut(s) 1127, 1159
AspLEI GCGC 5 cut(s) 155, 420, 556, 1430, 1432
AspS9I GGNCC 4 cut(s) 145, 256, 352, 1199
AsuC2I CCSGG 5 cut(s) 29, 74, 150, 298, 1798
AsuHPI GGTGA 7 cut(s) 3, 367, 959, 1086, 1470, 1520, 1710
AsuII TTCGAA 1 cut(s) 1012
AvaI CYCGRG 1 cut(s) 392
AvaII GGWCC 4 cut(s) 145, 256, 352, 1199
AxyI CCTNAGG 1 cut(s) 141
BalI TGGCCA 1 cut(s) 806
BamHI GGATCC 2 cut(s) 4, 459
BanI GGYRCC 2 cut(s) 152, 718
BanII GRGCYC 1 cut(s) 514
BbvCI CCTCAGC 1 cut(s) 1044
BccI CCATC 5 cut(s) 16, 830, 1513, 1594, 1849
BceAI ACGGC 8 cut(s) 63, 196, 328, 424, 433, 513, 577, 1018
BcgI CGANNNNNNTGC 2 cut(s) 232, 266
BciVI GTATCC 2 cut(s) 1563, 1697
BclI TGATCA 1 cut(s) 1537
BcnI CCSGG 5 cut(s) 29, 74, 150, 298, 1798
BcoDI GTCTC 2 cut(s) 230, 485
BfaI CTAG 1 cut(s) 1185
BfmI CTRYAG 1 cut(s) 1607
BfoI RGCGCY 1 cut(s) 156
BfuAI ACCTGC 2 cut(s) 1729, 2011
BfuI GTATCC 2 cut(s) 1563, 1697
Bme1390I CCNGG 5 cut(s) 29, 74, 150, 298, 1798
Bme18I GGWCC 4 cut(s) 145, 256, 352, 1199
BmeRI GACNNNNNGTC 1 cut(s) 1743
BmeT110I CYCGRG 1 cut(s) 392
BmgT120I GGNCC 4 cut(s) 145, 256, 352, 1199
BmiI GGNNCC 6 cut(s) 6, 147, 154, 461, 720, 1237
BmrFI CCNGG 5 cut(s) 29, 74, 150, 298, 1798
BmsI GCATC 5 cut(s) 1360, 1390, 1843, 1945, 1952
BpmI CTGGAG 4 cut(s) 870, 960, 1370, 1959
Bpu10I CCTNAGC 1 cut(s) 1044
Bpu14I TTCGAA 1 cut(s) 1012
BpuEI CTTGAG 1 cut(s) 314
BpuMI CCSGG 5 cut(s) 29, 74, 150, 298, 1798
BsaHI GRCGYC 4 cut(s) 126, 153, 434, 500
BsaJI CCNNGG 6 cut(s) 45, 148, 197, 504, 578, 606
BsaWI WCCGGW 1 cut(s) 1096
Bsc4I CCNNNNNNNGG 8 cut(s) 109, 162, 349, 540, 823, 1252, 1460, 2044
Bse118I RCCGGY 1 cut(s) 623
Bse1I ACTGG 2 cut(s) 1465, 1472
Bse21I CCTNAGG 1 cut(s) 141
Bse3DI GCAATG 4 cut(s) 112, 1122, 1949, 2007
BseDI CCNNGG 6 cut(s) 45, 148, 197, 504, 578, 606
BseGI GGATG 5 cut(s) 192, 841, 982, 1837, 1943
BseLI CCNNNNNNNGG 8 cut(s) 109, 162, 349, 540, 823, 1252, 1460, 2044
BseMI GCAATG 4 cut(s) 112, 1122, 1949, 2007
BseMII CTCAG 5 cut(s) 79, 155, 911, 1058, 1946
BseNI ACTGG 2 cut(s) 1465, 1472
BsePI GCGCGC 1 cut(s) 1428
BseRI GAGGAG 6 cut(s) 256, 296, 422, 899, 1491, 1764
BseX3I CGGCCG 4 cut(s) 30, 200, 313, 597
BsgI GTGCAG 1 cut(s) 193
Bsh1236I CGCG 5 cut(s) 554, 580, 602, 1007, 1430
Bsh1285I CGRYCG 4 cut(s) 33, 203, 316, 600
BshFI GGCC 7 cut(s) 32, 186, 202, 315, 599, 806, 1193
BshNI GGYRCC 2 cut(s) 152, 718
BsiEI CGRYCG 4 cut(s) 33, 203, 316, 600
BsiHKCI CYCGRG 1 cut(s) 392
BsiSI CCGG 9 cut(s) 29, 74, 150, 163, 298, 488, 624, 1097, 1797
BslFI GGGAC 2 cut(s) 131, 137
BslI CCNNNNNNNGG 8 cut(s) 109, 162, 349, 540, 823, 1252, 1460, 2044
BsmAI GTCTC 2 cut(s) 230, 485
BsmBI CGTCTC 1 cut(s) 485
BsmFI GGGAC 2 cut(s) 131, 137
BsmI GAATGC 1 cut(s) 730
BsnI GGCC 7 cut(s) 32, 186, 202, 315, 599, 806, 1193
BsoBI CYCGRG 1 cut(s) 392
Bsp119I TTCGAA 1 cut(s) 1012
Bsp1286I GDGCHC 1 cut(s) 514
Bsp19I CCATGG 2 cut(s) 504, 606
BspANI GGCC 7 cut(s) 32, 186, 202, 315, 599, 806, 1193
BspCNI CTCAG 5 cut(s) 78, 154, 910, 1057, 1945
BspFNI CGCG 5 cut(s) 554, 580, 602, 1007, 1430
BspLI GGNNCC 6 cut(s) 6, 147, 154, 461, 720, 1237
BspMAI CTGCAG 1 cut(s) 1611
BspMI ACCTGC 2 cut(s) 1729, 2011
BspT104I TTCGAA 1 cut(s) 1012
BspT107I GGYRCC 2 cut(s) 152, 718
BsrDI GCAATG 4 cut(s) 112, 1122, 1949, 2007
BsrFI RCCGGY 1 cut(s) 623
BsrI ACTGG 2 cut(s) 1465, 1472
BssAI RCCGGY 1 cut(s) 623
BssECI CCNNGG 6 cut(s) 45, 148, 197, 504, 578, 606
BssHII GCGCGC 1 cut(s) 1428
BssNI GRCGYC 4 cut(s) 126, 153, 434, 500
BssT1I CCWWGG 2 cut(s) 504, 606
Bst4CI ACNGT 7 cut(s) 1268, 1338, 1581, 1633, 1685, 1858, 2067
Bst6I CTCTTC 1 cut(s) 479
BstACI GRCGYC 4 cut(s) 126, 153, 434, 500
BstBI TTCGAA 1 cut(s) 1012
BstC8I GCNNGC 7 cut(s) 485, 873, 877, 1088, 1211, 1426, 1430
BstDEI CTNAG 5 cut(s) 65, 141, 897, 1044, 1932
BstDSI CCRYGG 4 cut(s) 45, 504, 578, 606
BstF5I GGATG 5 cut(s) 192, 841, 982, 1837, 1943
BstFNI CGCG 5 cut(s) 554, 580, 602, 1007, 1430
BstH2I RGCGCY 1 cut(s) 156
BstHHI GCGC 5 cut(s) 155, 420, 556, 1430, 1432
BstMAI GTCTC 2 cut(s) 230, 485
BstMCI CGRYCG 4 cut(s) 33, 203, 316, 600
BstSCI CCNGG 5 cut(s) 27, 72, 148, 296, 1796
BstSFI CTRYAG 1 cut(s) 1607
BstUI CGCG 5 cut(s) 554, 580, 602, 1007, 1430
BstX2I RGATCY 3 cut(s) 4, 388, 459
BstYI RGATCY 3 cut(s) 4, 388, 459
BstZI CGGCCG 4 cut(s) 30, 200, 313, 597
Bsu36I CCTNAGG 1 cut(s) 141
BsuI GTATCC 2 cut(s) 1563, 1697
BsuRI GGCC 7 cut(s) 32, 186, 202, 315, 599, 806, 1193
BtgI CCRYGG 4 cut(s) 45, 504, 578, 606
BtgZI GCGATG 1 cut(s) 1491
BtsCI GGATG 5 cut(s) 192, 841, 982, 1837, 1943
BtsIMutI CAGTG 1 cut(s) 1479
BveI ACCTGC 2 cut(s) 1729, 2011
Cac8I GCNNGC 7 cut(s) 485, 873, 877, 1088, 1211, 1426, 1430
CfoI GCGC 5 cut(s) 155, 420, 556, 1430, 1432
Cfr10I RCCGGY 1 cut(s) 623
Cfr13I GGNCC 4 cut(s) 145, 256, 352, 1199
Cfr42I CCGCGG 1 cut(s) 581
CseI GACGC 6 cut(s) 122, 310, 423, 489, 560, 1116
Csp6I GTAC 4 cut(s) 334, 412, 1156, 1264
CspCI CAANNNNNGTGG 2 cut(s) 1042, 1077
CviAII CATG 9 cut(s) 169, 400, 505, 607, 692, 1058, 1421, 1913, 1969
CviQI GTAC 4 cut(s) 334, 412, 1156, 1264
DdeI CTNAG 5 cut(s) 65, 141, 897, 1044, 1932
DinI GGCGCC 1 cut(s) 154
DrdI GACNNNNNNGTC 1 cut(s) 499
DriI GACNNNNNGTC 1 cut(s) 1743
DseDI GACNNNNNNGTC 1 cut(s) 499
EaeI YGGCCR 6 cut(s) 30, 184, 200, 313, 597, 804
EagI CGGCCG 4 cut(s) 30, 200, 313, 597
Eam1104I CTCTTC 1 cut(s) 479
Eam1105I GACNNNNNGTC 1 cut(s) 1743
EarI CTCTTC 1 cut(s) 479
EclXI CGGCCG 4 cut(s) 30, 200, 313, 597
Eco130I CCWWGG 2 cut(s) 504, 606
Eco24I GRGCYC 1 cut(s) 514
Eco47I GGWCC 4 cut(s) 145, 256, 352, 1199
Eco52I CGGCCG 4 cut(s) 30, 200, 313, 597
Eco57I CTGAAG 3 cut(s) 744, 1209, 1292
Eco81I CCTNAGG 1 cut(s) 141
Eco88I CYCGRG 1 cut(s) 392
EcoO109I RGGNCCY 3 cut(s) 145, 352, 1199
EcoT14I CCWWGG 2 cut(s) 504, 606
EcoT22I ATGCAT 1 cut(s) 1836
EcoT38I GRGCYC 1 cut(s) 514
EgeI GGCGCC 1 cut(s) 154
EheI GGCGCC 1 cut(s) 154
ErhI CCWWGG 2 cut(s) 504, 606
Esp3I CGTCTC 1 cut(s) 485
FaeI CATG 9 cut(s) 172, 403, 508, 610, 695, 1061, 1424, 1916, 1972
FalI AAGNNNNNCTT 2 cut(s) 1207, 1239
FaqI GGGAC 2 cut(s) 131, 137
FatI CATG 9 cut(s) 168, 399, 504, 606, 691, 1057, 1420, 1912, 1968
FauI CCCGC 4 cut(s) 110, 296, 620, 1218
FbaI TGATCA 1 cut(s) 1537
FblI GTMKAC 2 cut(s) 549, 785
FokI GGATG 5 cut(s) 179, 848, 989, 1824, 1930
FriOI GRGCYC 1 cut(s) 514
FspBI CTAG 1 cut(s) 1185
GlaI GCGC 5 cut(s) 154, 419, 555, 1429, 1431
GsuI CTGGAG 4 cut(s) 870, 960, 1370, 1959
HaeII RGCGCY 1 cut(s) 156
HaeIII GGCC 7 cut(s) 32, 186, 202, 315, 599, 806, 1193
HapII CCGG 9 cut(s) 29, 74, 150, 163, 298, 488, 624, 1097, 1797
HgaI GACGC 6 cut(s) 122, 310, 423, 489, 560, 1116
HhaI GCGC 5 cut(s) 155, 420, 556, 1430, 1432
Hin1I GRCGYC 4 cut(s) 126, 153, 434, 500
Hin1II CATG 9 cut(s) 172, 403, 508, 610, 695, 1061, 1424, 1916, 1972
Hin6I GCGC 5 cut(s) 153, 418, 554, 1428, 1430
HinP1I GCGC 5 cut(s) 153, 418, 554, 1428, 1430
HincII GTYRAC 2 cut(s) 550, 621
HindII GTYRAC 2 cut(s) 550, 621
HindIII AAGCTT 1 cut(s) 904
HpaII CCGG 9 cut(s) 29, 74, 150, 163, 298, 488, 624, 1097, 1797
HphI GGTGA 7 cut(s) 3, 367, 959, 1086, 1470, 1520, 1710
Hpy166II GTNNAC 5 cut(s) 256, 550, 621, 786, 934
Hpy188III TCNNGA 8 cut(s) 343, 392, 394, 777, 939, 1163, 1239, 1253
Hpy8I GTNNAC 5 cut(s) 256, 550, 621, 786, 934
HpyAV CCTTC 4 cut(s) 1101, 1803, 1872, 1917
HpyCH4III ACNGT 7 cut(s) 1268, 1338, 1581, 1633, 1685, 1858, 2067
HpyCH4IV ACGT 3 cut(s) 126, 225, 767
HpyF3I CTNAG 5 cut(s) 65, 141, 897, 1044, 1932
HpySE526I ACGT 3 cut(s) 126, 225, 767
Hsp92I GRCGYC 4 cut(s) 126, 153, 434, 500
Hsp92II CATG 9 cut(s) 172, 403, 508, 610, 695, 1061, 1424, 1916, 1972
HspAI GCGC 5 cut(s) 153, 418, 554, 1428, 1430
KasI GGCGCC 1 cut(s) 152
Ksp22I TGATCA 1 cut(s) 1537
KspI CCGCGG 1 cut(s) 581
LweI GCATC 5 cut(s) 1360, 1390, 1843, 1945, 1952
MaeI CTAG 1 cut(s) 1185
MaeII ACGT 3 cut(s) 126, 225, 767
MaeIII GTNAC 8 cut(s) 373, 632, 641, 1338, 1456, 1476, 1762, 1823
MboII GAAGA 3 cut(s) 466, 469, 673
MflI RGATCY 3 cut(s) 4, 388, 459
MhlI GDGCHC 1 cut(s) 514
MlsI TGGCCA 1 cut(s) 806
MluCI AATT 6 cut(s) 583, 808, 819, 1412, 1533, 1778
MluNI TGGCCA 1 cut(s) 806
Mly113I GGCGCC 1 cut(s) 153
MlyI GAGTC 7 cut(s) 71, 232, 353, 587, 629, 1732, 1966
MmeI TCCRAC 4 cut(s) 300, 615, 1396, 1652
Mox20I TGGCCA 1 cut(s) 806
Mph1103I ATGCAT 1 cut(s) 1836
MscI TGGCCA 1 cut(s) 806
MseI TTAA 2 cut(s) 443, 822
MslI CAYNNNNRTG 2 cut(s) 696, 1062
Msp20I TGGCCA 1 cut(s) 806
MspA1I CMGCKG 3 cut(s) 580, 875, 2045
MspI CCGG 9 cut(s) 29, 74, 150, 163, 298, 488, 624, 1097, 1797
MspR9I CCNGG 5 cut(s) 29, 74, 150, 298, 1798
Mva1269I GAATGC 1 cut(s) 730
MvnI CGCG 5 cut(s) 554, 580, 602, 1007, 1430
NarI GGCGCC 1 cut(s) 153
NciI CCSGG 5 cut(s) 29, 74, 150, 298, 1798
NcoI CCATGG 2 cut(s) 504, 606
NlaIII CATG 9 cut(s) 172, 403, 508, 610, 695, 1061, 1424, 1916, 1972
NlaIV GGNNCC 6 cut(s) 6, 147, 154, 461, 720, 1237
NmeAIII GCCGAG 2 cut(s) 178, 575
NmuCI GTSAC 4 cut(s) 373, 632, 1476, 1762
NsiI ATGCAT 1 cut(s) 1836
NspV TTCGAA 1 cut(s) 1012
PaeR7I CTCGAG 1 cut(s) 392
PaqCI CACCTGC 1 cut(s) 1729
PauI GCGCGC 1 cut(s) 1428
PcsI WCGNNNNNNNCGW 6 cut(s) 231, 390, 437, 746, 779, 788
PctI GAATGC 1 cut(s) 730
PfeI GAWTC 6 cut(s) 86, 536, 667, 743, 1100, 1256
PflFI GACNNNGTC 1 cut(s) 499
PfoI TCCNGGA 1 cut(s) 296
PleI GAGTC 7 cut(s) 71, 232, 353, 587, 629, 1732, 1966
PluTI GGCGCC 1 cut(s) 156
PpsI GAGTC 7 cut(s) 71, 232, 353, 587, 629, 1732, 1966
PpuMI RGGWCCY 3 cut(s) 145, 352, 1199
Psp5II RGGWCCY 3 cut(s) 145, 352, 1199
PspN4I GGNNCC 6 cut(s) 6, 147, 154, 461, 720, 1237
PspPI GGNCC 4 cut(s) 145, 256, 352, 1199
PspPPI RGGWCCY 3 cut(s) 145, 352, 1199
PstI CTGCAG 1 cut(s) 1611
PsuI RGATCY 3 cut(s) 4, 388, 459
PsyI GACNNNGTC 1 cut(s) 499
PteI GCGCGC 1 cut(s) 1428
PvuII CAGCTG 1 cut(s) 875
RsaI GTAC 4 cut(s) 335, 413, 1157, 1265
RsaNI GTAC 4 cut(s) 334, 412, 1156, 1264
RseI CAYNNNNRTG 2 cut(s) 696, 1062
SacII CCGCGG 1 cut(s) 581
SalI GTCGAC 1 cut(s) 548
SaqAI TTAA 2 cut(s) 443, 822
Sau96I GGNCC 4 cut(s) 145, 256, 352, 1199
SchI GAGTC 7 cut(s) 71, 232, 353, 587, 629, 1732, 1966
ScrFI CCNGG 5 cut(s) 29, 74, 150, 298, 1798
SduI GDGCHC 1 cut(s) 514
SfaNI GCATC 5 cut(s) 1360, 1390, 1843, 1945, 1952
SfcI CTRYAG 1 cut(s) 1607
SfoI GGCGCC 1 cut(s) 154
Sfr274I CTCGAG 1 cut(s) 392
Sfr303I CCGCGG 1 cut(s) 581
SfuI TTCGAA 1 cut(s) 1012
SgrBI CCGCGG 1 cut(s) 581
SgrDI CGTCGACG 1 cut(s) 548
SinI GGWCC 4 cut(s) 145, 256, 352, 1199
SlaI CTCGAG 1 cut(s) 392
SmiMI CAYNNNNRTG 2 cut(s) 696, 1062
SmlI CTYRAG 2 cut(s) 329, 392
SmoI CTYRAG 2 cut(s) 329, 392
Sse9I AATT 6 cut(s) 583, 808, 819, 1412, 1533, 1778
SspDI GGCGCC 1 cut(s) 152
SspI AATATT 1 cut(s) 1444
SspMI CTAG 1 cut(s) 1185
StyD4I CCNGG 5 cut(s) 27, 72, 148, 296, 1796
StyI CCWWGG 2 cut(s) 504, 606
TaaI ACNGT 7 cut(s) 1268, 1338, 1581, 1633, 1685, 1858, 2067
TaiI ACGT 3 cut(s) 129, 228, 770
TaqI TCGA 9 cut(s) 84, 129, 357, 393, 455, 549, 734, 1012, 1643
TaqII GACCGA 1 cut(s) 1745
TasI AATT 6 cut(s) 583, 808, 819, 1412, 1533, 1778
TatI WGTACW 1 cut(s) 1155
TfiI GAWTC 6 cut(s) 86, 536, 667, 743, 1100, 1256
Tru1I TTAA 2 cut(s) 443, 822
Tru9I TTAA 2 cut(s) 443, 822
TscAI CASTG 1 cut(s) 1479
TseFI GTSAC 4 cut(s) 373, 632, 1476, 1762
Tsp45I GTSAC 4 cut(s) 373, 632, 1476, 1762
TspDTI ATGAA 6 cut(s) 971, 1454, 1514, 1908, 1929, 2025
TspGWI ACGGA 4 cut(s) 46, 361, 362, 452
TspRI CASTG 1 cut(s) 1479
Tth111I GACNNNGTC 1 cut(s) 499
VpaK11BI GGWCC 4 cut(s) 145, 256, 352, 1199
XapI RAATTY 1 cut(s) 583
XhoI CTCGAG 1 cut(s) 392
XmiI GTMKAC 2 cut(s) 549, 785
XspI CTAG 1 cut(s) 1185
ZraI GACGTC 1 cut(s) 127
Zsp2I ATGCAT 1 cut(s) 1836
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.