Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003214

Physical Location & Seq

Genomic Coordinates Forward (+)

6970683 .. 6976691

Gene Structure 6009 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G20010.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3144 bp

ATGGATTCTGCTATTGAAATTAGTTCAGGTAGTGATAGTGATGACGAAGTACCACCGCAGCCTGTTTGGCCACAAACTCGAACCAGGATGGATCCCACATGGCTAAGCAGGAGACCTTTGCCTACAGTGGATAGCCATGCTAGAGCTGAACATACAAATCAGGCTCCTCCCAATGGTGCCTCGAGTGATACTTCTCGGCCTGGAGTCTCTAAGCCTTTCACAGGGAATGGGAACACTGTAAACTCGAGAATTTCCAGTGGATCTGGTGCTGATTATGTGAGACTGTCTTCTGAGCAAGCTCTGAAAAGAACTCTTCCACCCTCTTTTAATTCCCCTCCCCTTCCTGCCAGAAGTGGCACTAACAATATAAGTAATGCTAGTGGAAGTCGTGTTGGTGTGGATTATGAGAGACCATTGTCTCAGCAAGCTCTGAAAAGAACTCTTCCACCCTCTTTTAATCCCCCTCCCCTTCCTTCCAGAAGTGGCACAAACAATATACGTAATGCTGGTGGGAGTCGCTTTGGTGCCGATTATAGTCATCCAGCTGTGTCAGCTGTAGGCAACAAGAGTACCTTTGGTGATCATTATAGTGGAGCCCATGCTGAGATAGGAATTCAACGTGGCGTGAATGGGGTTAGGATCCTGCCTCCATCTCTGACGCATGGAACATCTGCTTCTGTTTTGCATCATGCTGGTTCGAGTGATCCAATGCACAGGTTTGGTGGTGGTGAAGATAGGAATCCTGATAACGATGAAAGGCTGGTTTATCAGGCTGCACTACAGGTTTTGAATCAACCCATGACTGAAAGTGATCTACCTCCTGGTACTCTTTCAGTTCCTCTTATGAGGCATCAGAAAATTGCGTTGGCATGGATGTTTCAGAAGGAAACAAGTAGTTTCAACTGTCCAGGAGGGATACTAGCAGATGATCAGGGACTTGGTAAGACGGTCTCGACGATTGCTCTTATCCTAAAGCAAAAGATTGTGTCACAACTGAAGTCCGAAAGTTCATGCAAGCAAGAAACTGAGGCATTAGTCCTGGATGCTGATGATGAGTCAGACAATGCAAAGCATGAAAGTGGTAGTCATGTAAAACCAGAGCTCAAGGTTTCAAGCAACAGTGAGACCTCGGTTCTGAGTGCATGTGGTAATGATGAGAATGACAGTTCAGATATGGAGAAAGCCGAAGATGAAGAAGCTAATTCTTCAACACGAGCATTTCAGTGGAAGAGACCAGCTGCTGGTACATTAATTGTTTGCCCAGCGAGTGTTGTAAGGCAGTGGGCAAGAGAGCTTGATGAGAAGGTTTCTGAAGAATCCAAACTTTCTGTGTTAGTCTACCATGGTAGTAATAGGACCAAAGATCCTAATGAATTAGCAGAATACGATGTGGTTGTGACAACGTACGCTATTGTTACTAATGAAGCTCCCAACAAATTCTTGGTGGATGAGGATGAGAACGATGAAAAAAATACTGACAGATATGGTCTTGCCTCTGGCTTCTCCAACAATAAGAAACGGAAAGTCGTGGTGGGTGCTAGTAAGAAGAGTAAAAGAAGAGGTAGAAAAAGCACTAACGATACTTCTTCTGAGCCTGATTGTGGTCCTCTAGGAAAGGTTGGGTGGTTCAGAATAGTACTAGATGAAGCTCAGACAATTAAGAACTATAGAACACAAATGGCAAGATCATGTTGCACTCTTCGAGCCAAAAGGAGGTGGTGCTTGTCTGGAACACCAATACAAAATACGATTGATGATTTATATAGCTATTTCAGGTTTCTTAGATATGATCCATATGCGGTGTACAAGTCATTTTACAGTACAATCAAGGTTCCAATTTCCAGAAATTCTTGTCAAGGTTACAAGAAGCTTCAAGCTGTTCTAAGGGCTATAATGCTGCGCCGCACCAAAGGAACATTGCTTGATGGGAAACCCATAATTAATCTACCTCCAAAGGTAGTAAATTTGAGCCAGGTAGACTTTTCAGTGGCTGAGCGCTCTTTCTACAAGAAGCTTGAAGCTGATTCACGTTCACAGTTCAAGGCCTATGCTGATGCGGGAACTTTGAGTCAAAACTACGCAAATATTCTTCTGTTGCTTTTGCGACTACGCCAAGCTTGTGACCACCCACAACTTGTTAAAAGATATAACTCAGATCCTGTTGGAAAAGTATCAGAAGCAGCAGTTAGAAGACTCCCTAGGGAGGCTCGAAGCAGACTGATCAATCGCTTAGAGTCATCATCTGCCATCTGCTATGAGTGCAATGAGCCACCAGAAAAACCTGTTGTTACGTTGTGTGGCCATATATTTTGCTATGAATGTGTTTTAGAATACATAACTGGGGATGAGAACACGTGCCCTGTACCGAGATGCAAACAACAGCTTGCGCGTGATGTTGTTTTCTCTGAATCTTCTCTTAGAAATTGCACTTCTGATGATTCGGGCTGTAGTTCCTCTCATGATAATGGTCTTGATAGATCGGTATTTCAAAAAAGAGACTTTTGTTCATCAAAAATTAAAGCTGTCCTCGATATCCTGCAGTCGCTTTCCCAACCAGACAGTCCAAACTCAGCTCAGCATGGTCAAATGCCATCTTCCTCACGGCCATATGATGACGATGATGTTACCATTGTAGAGCCAATGCGTCTTCACTCATCTTCACCTAGCCAGGGGGCAGTAAAGACGATAATATTTTCTCAGTGGACTGGTATGCTTGACTTGGTTGAGCTGCGTATTCTTGAAAGTGGTATTGAATTCAGAAGATTAGATGGCACAATGAGTCTAGCAGCAAGAGACAGGGCGGTTAAAGAATTCAGTAAAAAACCAGATGTAAAGGTGATGCTGATGTCGCTAAAAGCTGGAAACCTTGGGCTGAATATGGTAGCTGCATGTCATGTTATTCTCTTGGATCTTTGGTGGAATCCAACTACCGAAGATCAGGCGATTGATCGTGCACATCGTATTGGACAAACTCGGCCAGTTACTGTAACTCGCATAACTATAAAAGACACCGTTGAGGATAGAATTTTGAAGCTTCAGGAAGAGAAAAGGACAATGGTTGCATCGGCCTTTGGTGAAGAACATGGTGGAAGCTCTGCGACACGTCTAACAGTAGACGATCTCAAGTATCTGTTTATGGTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000724 GO:0000725 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006304 GO:0006305 GO:0006306 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009292 GO:0009294 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016458 GO:0019222 GO:0031047 GO:0032259 GO:0033554 GO:0034641 GO:0043170 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0044728 GO:0044764 GO:0045003 GO:0046483 GO:0048519 GO:0050789 GO:0050896 GO:0051704 GO:0051716 GO:0060255 GO:0065007 GO:0071704 GO:0080188 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko04918 map04918

Pfam Domains

Protein Families

Helicase_C SNF2_N zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3

Protein Analysis

1047

Amino Acids

115.47

Weight (kDa)

8.3

Isoelectric Point (pI)

53.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SNF2-rel_dom	PF00176	12 - 421	1.3e-65	SNF2-related domain
zf-RING_5	PF14634	459 - 502	4e-06	zinc-RING finger domain
Helicase_C	PF00271	603 - 698	1.1e-19	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003214)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G50410 AT1G50410 AT1G50410 AT1G50410 AT3G20010 AT3G20010 AT3G20010 AT3G20010 AT3G20010 AT3G20010 AT3G20010 AT3G20010
fragaria_vesca	FvH4_4g37270 FvH4_4g37270 FvH4_4g37270
malus_domestica	MD00G1127300.v1.1 MD13G1002000.v1.1
prunus_persica	Prupe.1G350600_v2.0.a1 Prupe.1G350600_v2.0.a1 Prupe.1G350600_v2.0.a1 Prupe.1G350600_v2.0.a1
pyrus_communis	pycom13g00160 pycom13g00170 pycom16g00060
rosa_chinensis	RchiOBHm_Chr4g0447091
rosa_laevigata	RLG00000005606
rosa_multiflora	Rmu_sc0014071.1_g000001
rosa_roxburghii	Rroxscaffold_5G00387400
rosa_rugosa	Rorug04G0377800 Rorug04G0377800 Rorug04G0377900 Rorug04G0378000
rosa_samantha	Rh4AG439200 Rh4BG448200 Rh4CG465300 Rh4DG446700
rosa_wichuraiana	Rw4G037570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	176, 524
AccB7I	CCANNNNNTGG	1 cut(s)	1241
AccI	GTMKAC	3 cut(s)	1338, 1977, 3114
AccII	CGCG	1 cut(s)	2389
AciI	CCGC	5 cut(s)	56, 1799, 1903, 2057, 2801
AcoI	YGGCCR	4 cut(s)	68, 2299, 2603, 2975
AcsI	RAATTY	8 cut(s)	249, 612, 1436, 1846, 1963, 2753, 2810, 3024
AcuI	CTGAAG	3 cut(s)	1016, 1332, 3020
AcvI	CACGTG	1 cut(s)	2355
AfaI	GTAC	9 cut(s)	51, 571, 826, 1246, 1406, 1638, 1805, 1822, 2364
AfeI	AGCGCT	1 cut(s)	1997
AfiI	CCNNNNNNNGG	7 cut(s)	173, 221, 1241, 1601, 1713, 2203, 2669
AflIII	ACRYGT	2 cut(s)	2352, 3101
AjiI	CACGTC	1 cut(s)	3104
AjnI	CCWGG	7 cut(s)	83, 199, 820, 907, 1038, 1971, 2667
AjuI	GAANNNNNNNTTGG	2 cut(s)	848, 880
Alw21I	GWGCWC	2 cut(s)	1104, 2956
Alw44I	GTGCAC	1 cut(s)	2952
AlwNI	CAGNNNCTG	4 cut(s)	1241, 1991, 2159, 2984
Ama87I	CYCGRG	2 cut(s)	181, 244
Aor51HI	AGCGCT	1 cut(s)	1997
AoxI	GGCC	7 cut(s)	68, 197, 2043, 2299, 2603, 2975, 3066
ApaLI	GTGCAC	1 cut(s)	2952
ApeKI	GCWGC	8 cut(s)	58, 773, 1238, 1897, 2180, 2728, 2786, 2885
ApoI	RAATTY	8 cut(s)	249, 612, 1436, 1846, 1963, 2753, 2810, 3024
AseI	ATTAAT	2 cut(s)	1250, 1941
AspA2I	CCTAGG	1 cut(s)	2198
AspLEI	GCGC	3 cut(s)	1902, 1998, 2389
AspS9I	GGNCC	2 cut(s)	1356, 1604
AsuHPI	GGTGA	5 cut(s)	590, 740, 2652, 2848, 3086
AvaI	CYCGRG	2 cut(s)	181, 244
AvaII	GGWCC	2 cut(s)	1356, 1604
AvrII	CCTAGG	1 cut(s)	2198
BaeGI	GKGCMC	2 cut(s)	2360, 2956
BaeI	ACNNNNGTAYC	2 cut(s)	553, 586
BalI	TGGCCA	2 cut(s)	70, 2301
BamHI	GGATCC	2 cut(s)	91, 639
BanI	GGYRCC	2 cut(s)	176, 524
BanII	GRGCYC	2 cut(s)	598, 1104
BauI	CACGAG	1 cut(s)	1212
BbrPI	CACGTG	1 cut(s)	2355
BbsI	GAAGAC	3 cut(s)	279, 2197, 2639
Bbv12I	GWGCWC	2 cut(s)	1104, 2956
BbvI	GCAGC	8 cut(s)	70, 760, 1225, 1884, 2192, 2715, 2798, 2872
BccI	CCATC	6 cut(s)	82, 658, 1919, 2255, 2599, 2762
BceAI	ACGGC	1 cut(s)	2618
BciT130I	CCWGG	7 cut(s)	85, 201, 822, 909, 1040, 1973, 2669
BciVI	GTATCC	1 cut(s)	909
BclI	TGATCA	3 cut(s)	580, 928, 2220
BfaI	CTAG	9 cut(s)	141, 378, 920, 1539, 1610, 1640, 2199, 2664, 2783
BfmI	CTRYAG	6 cut(s)	123, 555, 779, 1666, 2446, 2537
BfoI	RGCGCY	1 cut(s)	1999
BfuI	GTATCC	1 cut(s)	909
BglI	GCCNNNNNGGC	1 cut(s)	67
BisI	GCNGC	9 cut(s)	59, 774, 1239, 1898, 1903, 2181, 2729, 2787, 2886
BlnI	CCTAGG	1 cut(s)	2198
BlpI	GCTNAGC	3 cut(s)	104, 1992, 2574
BlsI	GCNGC	9 cut(s)	60, 775, 1240, 1899, 1904, 2182, 2730, 2788, 2887
BmcAI	AGTACT	1 cut(s)	1638
Bme1390I	CCNGG	7 cut(s)	85, 201, 822, 909, 1040, 1973, 2669
Bme18I	GGWCC	2 cut(s)	1356, 1604
BmeT110I	CYCGRG	2 cut(s)	181, 244
BmgBI	CACGTC	1 cut(s)	3104
BmgT120I	GGNCC	2 cut(s)	1356, 1604
BmiI	GGNNCC	7 cut(s)	93, 165, 178, 526, 595, 641, 1833
BmrFI	CCNGG	7 cut(s)	85, 201, 822, 909, 1040, 1973, 2669
BmrI	ACTGGG	1 cut(s)	2349
BmsI	GCATC	7 cut(s)	694, 859, 1033, 2044, 2360, 2829, 3071
BmuI	ACTGGG	1 cut(s)	2349
BoxI	GACNNNNGTC	1 cut(s)	415
BpiI	GAAGAC	3 cut(s)	279, 2197, 2639
BpmI	CTGGAG	1 cut(s)	222
Bpu1102I	GCTNAGC	3 cut(s)	104, 1992, 2574
BpuEI	CTTGAG	2 cut(s)	1088, 3107
BsaAI	YACGTR	2 cut(s)	500, 2355
BsaBI	GATNNNNATC	1 cut(s)	738
BsaI	GGTCTC	5 cut(s)	106, 403, 955, 1118, 1225
BsaJI	CCNNGG	5 cut(s)	1128, 1342, 2198, 2668, 2866
Bsc4I	CCNNNNNNNGG	7 cut(s)	173, 221, 1241, 1601, 1713, 2203, 2669
Bse1I	ACTGG	4 cut(s)	255, 2344, 2710, 2978
Bse3DI	GCAATG	2 cut(s)	1916, 2269
Bse8I	GATNNNNATC	1 cut(s)	738
BseBI	CCWGG	7 cut(s)	85, 201, 822, 909, 1040, 1973, 2669
BseDI	CCNNGG	5 cut(s)	1128, 1342, 2198, 2668, 2866
BseGI	GGATG	7 cut(s)	93, 538, 879, 1048, 1453, 1459, 2350
BseJI	GATNNNNATC	1 cut(s)	738
BseLI	CCNNNNNNNGG	7 cut(s)	173, 221, 1241, 1601, 1713, 2203, 2669
BseMI	GCAATG	2 cut(s)	1916, 2269
BseNI	ACTGG	4 cut(s)	255, 2344, 2710, 2978
BseRI	GAGGAG	1 cut(s)	156
BseSI	GKGCMC	2 cut(s)	2360, 2956
BseXI	GCAGC	8 cut(s)	70, 760, 1225, 1884, 2192, 2715, 2798, 2872
BseYI	CCCAGC	1 cut(s)	1261
BsgI	GTGCAG	1 cut(s)	759
Bsh1236I	CGCG	1 cut(s)	2389
BshFI	GGCC	7 cut(s)	70, 199, 2045, 2301, 2605, 2977, 3068
BshNI	GGYRCC	2 cut(s)	176, 524
BsiHKAI	GWGCWC	2 cut(s)	1104, 2956
BsiHKCI	CYCGRG	2 cut(s)	181, 244
BsiWI	CGTACG	1 cut(s)	1404
BslFI	GGGAC	1 cut(s)	948
BslI	CCNNNNNNNGG	7 cut(s)	173, 221, 1241, 1601, 1713, 2203, 2669
BsmFI	GGGAC	1 cut(s)	948
BsnI	GGCC	7 cut(s)	70, 199, 2045, 2301, 2605, 2977, 3068
Bso31I	GGTCTC	5 cut(s)	106, 403, 955, 1118, 1225
BsoBI	CYCGRG	2 cut(s)	181, 244
Bsp1286I	GDGCHC	4 cut(s)	598, 1104, 2360, 2956
Bsp1407I	TGTACA	1 cut(s)	1803
Bsp1720I	GCTNAGC	3 cut(s)	104, 1992, 2574
Bsp19I	CCATGG	1 cut(s)	1342
BspACI	CCGC	5 cut(s)	56, 1799, 1903, 2057, 2801
BspANI	GGCC	7 cut(s)	70, 199, 2045, 2301, 2605, 2977, 3068
BspFNI	CGCG	1 cut(s)	2389
BspHI	TCATGA	1 cut(s)	2458
BspLI	GGNNCC	7 cut(s)	93, 165, 178, 526, 595, 641, 1833
BspMAI	CTGCAG	1 cut(s)	2541
BspT107I	GGYRCC	2 cut(s)	176, 524
BspTNI	GGTCTC	5 cut(s)	106, 403, 955, 1118, 1225
BsrDI	GCAATG	2 cut(s)	1916, 2269
BsrGI	TGTACA	1 cut(s)	1803
BsrI	ACTGG	4 cut(s)	255, 2344, 2710, 2978
BssECI	CCNNGG	5 cut(s)	1128, 1342, 2198, 2668, 2866
BssSI	CACGAG	1 cut(s)	1212
BssT1I	CCWWGG	3 cut(s)	1342, 2198, 2866
Bst2BI	CACGAG	1 cut(s)	1212
Bst2UI	CCWGG	7 cut(s)	85, 201, 822, 909, 1040, 1973, 2669
Bst6I	CTCTTC	7 cut(s)	318, 447, 1223, 1541, 1552, 1704, 3036
BstAUI	TGTACA	1 cut(s)	1803
BstBAI	YACGTR	2 cut(s)	500, 2355
BstC8I	GCNNGC	4 cut(s)	297, 426, 1016, 2385
BstDSI	CCRYGG	1 cut(s)	1342
BstENI	CCTNNNNNAGG	1 cut(s)	219
BstF5I	GGATG	7 cut(s)	93, 538, 879, 1048, 1453, 1459, 2350
BstFNI	CGCG	1 cut(s)	2389
BstH2I	RGCGCY	1 cut(s)	1999
BstHHI	GCGC	3 cut(s)	1902, 1998, 2389
BstMWI	GCNNNNNNNGC	4 cut(s)	67, 551, 2259, 2848
BstNI	CCWGG	7 cut(s)	85, 201, 822, 909, 1040, 1973, 2669
BstNSI	RCATGY	2 cut(s)	1146, 2892
BstPAI	GACNNNNGTC	1 cut(s)	415
BstSCI	CCNGG	7 cut(s)	83, 199, 820, 907, 1038, 1971, 2667
BstSFI	CTRYAG	6 cut(s)	123, 555, 779, 1666, 2446, 2537
BstSLI	GKGCMC	2 cut(s)	2360, 2956
BstSNI	TACGTA	1 cut(s)	500
BstUI	CGCG	1 cut(s)	2389
BstV1I	GCAGC	8 cut(s)	70, 760, 1225, 1884, 2192, 2715, 2798, 2872
BstV2I	GAAGAC	3 cut(s)	279, 2197, 2639
BstX2I	RGATCY	6 cut(s)	91, 260, 639, 1363, 2155, 2908
BstYI	RGATCY	6 cut(s)	91, 260, 639, 1363, 2155, 2908
BsuI	GTATCC	1 cut(s)	909
BsuRI	GGCC	7 cut(s)	70, 199, 2045, 2301, 2605, 2977, 3068
BtgI	CCRYGG	1 cut(s)	1342
BtrI	CACGTC	1 cut(s)	3104
BtsCI	GGATG	7 cut(s)	93, 538, 879, 1048, 1453, 1459, 2350
BtsI	GCAGTG	1 cut(s)	1286
BtsIMutI	CAGTG	8 cut(s)	132, 234, 262, 1126, 1229, 1286, 1992, 2705
Cac8I	GCNNGC	4 cut(s)	297, 426, 1016, 2385
CaiI	CAGNNNCTG	4 cut(s)	1241, 1991, 2159, 2984
CciI	TCATGA	1 cut(s)	2458
CfoI	GCGC	3 cut(s)	1902, 1998, 2389
Cfr13I	GGNCC	2 cut(s)	1356, 1604
CseI	GACGC	2 cut(s)	667, 2633
Csp6I	GTAC	9 cut(s)	50, 570, 825, 1245, 1405, 1637, 1804, 1821, 2363
CviQI	GTAC	9 cut(s)	50, 570, 825, 1245, 1405, 1637, 1804, 1821, 2363
EaeI	YGGCCR	4 cut(s)	68, 2299, 2603, 2975
Eam1104I	CTCTTC	7 cut(s)	318, 447, 1223, 1541, 1552, 1704, 3036
EarI	CTCTTC	7 cut(s)	318, 447, 1223, 1541, 1552, 1704, 3036
Ecl136II	GAGCTC	1 cut(s)	1102
Eco105I	TACGTA	1 cut(s)	500
Eco130I	CCWWGG	3 cut(s)	1342, 2198, 2866
Eco147I	AGGCCT	1 cut(s)	2045
Eco24I	GRGCYC	2 cut(s)	598, 1104
Eco31I	GGTCTC	5 cut(s)	106, 403, 955, 1118, 1225
Eco32I	GATATC	1 cut(s)	2533
Eco47I	GGWCC	2 cut(s)	1356, 1604
Eco47III	AGCGCT	1 cut(s)	1997
Eco53kI	GAGCTC	1 cut(s)	1102
Eco57I	CTGAAG	3 cut(s)	1016, 1332, 3020
Eco72I	CACGTG	1 cut(s)	2355
Eco88I	CYCGRG	2 cut(s)	181, 244
EcoICRI	GAGCTC	1 cut(s)	1102
EcoNI	CCTNNNNNAGG	1 cut(s)	219
EcoRI	GAATTC	3 cut(s)	612, 2753, 2810
EcoRII	CCWGG	7 cut(s)	83, 199, 820, 907, 1038, 1971, 2667
EcoRV	GATATC	1 cut(s)	2533
EcoT14I	CCWWGG	3 cut(s)	1342, 2198, 2866
EcoT38I	GRGCYC	2 cut(s)	598, 1104
ErhI	CCWWGG	3 cut(s)	1342, 2198, 2866
FalI	AAGNNNNNCTT	2 cut(s)	557, 589
FaqI	GGGAC	1 cut(s)	948
FauI	CCCGC	1 cut(s)	2050
FauNDI	CATATG	2 cut(s)	1795, 2608
FbaI	TGATCA	3 cut(s)	580, 928, 2220
FblI	GTMKAC	3 cut(s)	1338, 1977, 3114
Fnu4HI	GCNGC	9 cut(s)	59, 774, 1239, 1898, 1903, 2181, 2729, 2787, 2886
FokI	GGATG	7 cut(s)	100, 525, 886, 1055, 1460, 1466, 2357
FriOI	GRGCYC	2 cut(s)	598, 1104
Fsp4HI	GCNGC	9 cut(s)	59, 774, 1239, 1898, 1903, 2181, 2729, 2787, 2886
FspBI	CTAG	9 cut(s)	141, 378, 920, 1539, 1610, 1640, 2199, 2664, 2783
GlaI	GCGC	3 cut(s)	1901, 1997, 2388
GluI	GCNGC	9 cut(s)	59, 774, 1239, 1898, 1903, 2181, 2729, 2787, 2886
GsaI	CCCAGC	1 cut(s)	1265
GsuI	CTGGAG	1 cut(s)	222
HaeII	RGCGCY	1 cut(s)	1999
HaeIII	GGCC	7 cut(s)	70, 199, 2045, 2301, 2605, 2977, 3068
HgaI	GACGC	2 cut(s)	667, 2633
HhaI	GCGC	3 cut(s)	1902, 1998, 2389
Hin6I	GCGC	3 cut(s)	1900, 1996, 2387
HinP1I	GCGC	3 cut(s)	1900, 1996, 2387
HindIII	AAGCTT	4 cut(s)	1868, 2012, 2115, 3032
HphI	GGTGA	5 cut(s)	590, 740, 2652, 2848, 3086
Hpy166II	GTNNAC	8 cut(s)	241, 1339, 1804, 1978, 2033, 2703, 2954, 3115
Hpy8I	GTNNAC	8 cut(s)	241, 1339, 1804, 1978, 2033, 2703, 2954, 3115
Hpy99I	CGWCG	1 cut(s)	958
HpyAV	CCTTC	5 cut(s)	350, 479, 483, 877, 1297
HpyCH4IV	ACGT	7 cut(s)	499, 619, 1403, 2029, 2291, 2354, 3103
HpyF10VI	GCNNNNNNNGC	4 cut(s)	67, 551, 2259, 2848
HpySE526I	ACGT	7 cut(s)	499, 619, 1403, 2029, 2291, 2354, 3103
HspAI	GCGC	3 cut(s)	1900, 1996, 2387
Ksp22I	TGATCA	3 cut(s)	580, 928, 2220
LmnI	GCTCC	3 cut(s)	169, 593, 1432
Lsp1109I	GCAGC	8 cut(s)	70, 760, 1225, 1884, 2192, 2715, 2798, 2872
LweI	GCATC	7 cut(s)	694, 859, 1033, 2044, 2360, 2829, 3071
MaeI	CTAG	9 cut(s)	141, 378, 920, 1539, 1610, 1640, 2199, 2664, 2783
MaeII	ACGT	7 cut(s)	499, 619, 1403, 2029, 2291, 2354, 3103
MaeIII	GTNAC	9 cut(s)	987, 1396, 1414, 1859, 2120, 2287, 2623, 2980, 2986
MflI	RGATCY	6 cut(s)	91, 260, 639, 1363, 2155, 2908
MhlI	GDGCHC	4 cut(s)	598, 1104, 2360, 2956
MlsI	TGGCCA	2 cut(s)	70, 2301
MluNI	TGGCCA	2 cut(s)	70, 2301
MlyI	GAGTC	7 cut(s)	213, 523, 1064, 2077, 2187, 2243, 2788
MmeI	TCCRAC	3 cut(s)	1530, 2143, 2948
Mox20I	TGGCCA	2 cut(s)	70, 2301
MscI	TGGCCA	2 cut(s)	70, 2301
MseI	TTAA	8 cut(s)	327, 456, 1250, 1659, 1941, 2139, 2517, 2805
MslI	CAYNNNNRTG	4 cut(s)	588, 1077, 1222, 2463
Msp20I	TGGCCA	2 cut(s)	70, 2301
MspA1I	CMGCKG	3 cut(s)	545, 554, 1238
MspR9I	CCNGG	7 cut(s)	85, 201, 822, 909, 1040, 1973, 2669
MvaI	CCWGG	7 cut(s)	85, 201, 822, 909, 1040, 1973, 2669
MvnI	CGCG	1 cut(s)	2389
MwoI	GCNNNNNNNGC	4 cut(s)	67, 551, 2259, 2848
NcoI	CCATGG	1 cut(s)	1342
NdeI	CATATG	2 cut(s)	1795, 2608
NlaIV	GGNNCC	7 cut(s)	93, 165, 178, 526, 595, 641, 1833
NmeAIII	GCCGAG	2 cut(s)	175, 2953
NmuCI	GTSAC	3 cut(s)	987, 1396, 2120
NspI	RCATGY	2 cut(s)	1146, 2892
PaeR7I	CTCGAG	2 cut(s)	181, 244
PagI	TCATGA	1 cut(s)	2458
PceI	AGGCCT	1 cut(s)	2045
PcsI	WCGNNNNNNNCGW	2 cut(s)	953, 2956
PfeI	GAWTC	8 cut(s)	5, 739, 790, 1316, 2024, 2408, 2438, 2920
Pfl23II	CGTACG	1 cut(s)	1404
PflMI	CCANNNNNTGG	1 cut(s)	1241
PfoI	TCCNGGA	2 cut(s)	907, 1038
PkrI	GCNGC	9 cut(s)	60, 775, 1240, 1899, 1904, 2182, 2730, 2788, 2887
PleI	GAGTC	7 cut(s)	212, 522, 1063, 2076, 2187, 2242, 2787
PmaCI	CACGTG	1 cut(s)	2355
PmlI	CACGTG	1 cut(s)	2355
PpsI	GAGTC	7 cut(s)	212, 522, 1063, 2076, 2187, 2242, 2787
Ppu21I	YACGTR	2 cut(s)	500, 2355
PshAI	GACNNNNGTC	1 cut(s)	415
PshBI	ATTAAT	2 cut(s)	1250, 1941
Psp124BI	GAGCTC	1 cut(s)	1104
Psp6I	CCWGG	7 cut(s)	83, 199, 820, 907, 1038, 1971, 2667
PspCI	CACGTG	1 cut(s)	2355
PspFI	CCCAGC	1 cut(s)	1261
PspGI	CCWGG	7 cut(s)	83, 199, 820, 907, 1038, 1971, 2667
PspLI	CGTACG	1 cut(s)	1404
PspN4I	GGNNCC	7 cut(s)	93, 165, 178, 526, 595, 641, 1833
PspPI	GGNCC	2 cut(s)	1356, 1604
PspXI	VCTCGAGB	1 cut(s)	181
PstI	CTGCAG	1 cut(s)	2541
PstNI	CAGNNNCTG	4 cut(s)	1241, 1991, 2159, 2984
PsuI	RGATCY	6 cut(s)	91, 260, 639, 1363, 2155, 2908
PvuII	CAGCTG	3 cut(s)	545, 554, 1238
RsaI	GTAC	9 cut(s)	51, 571, 826, 1246, 1406, 1638, 1805, 1822, 2364
RsaNI	GTAC	9 cut(s)	50, 570, 825, 1245, 1405, 1637, 1804, 1821, 2363
RseI	CAYNNNNRTG	4 cut(s)	588, 1077, 1222, 2463
SacI	GAGCTC	1 cut(s)	1104
SaqAI	TTAA	8 cut(s)	327, 456, 1250, 1659, 1941, 2139, 2517, 2805
SatI	GCNGC	9 cut(s)	59, 774, 1239, 1898, 1903, 2181, 2729, 2787, 2886
Sau96I	GGNCC	2 cut(s)	1356, 1604
ScaI	AGTACT	1 cut(s)	1638
SchI	GAGTC	7 cut(s)	213, 523, 1064, 2077, 2187, 2243, 2788
ScrFI	CCNGG	7 cut(s)	85, 201, 822, 909, 1040, 1973, 2669
SduI	GDGCHC	4 cut(s)	598, 1104, 2360, 2956
SfaNI	GCATC	7 cut(s)	694, 859, 1033, 2044, 2360, 2829, 3071
SfcI	CTRYAG	6 cut(s)	123, 555, 779, 1666, 2446, 2537
Sfr274I	CTCGAG	2 cut(s)	181, 244
SinI	GGWCC	2 cut(s)	1356, 1604
SlaI	CTCGAG	2 cut(s)	181, 244
SmiMI	CAYNNNNRTG	4 cut(s)	588, 1077, 1222, 2463
SmlI	CTYRAG	4 cut(s)	181, 244, 1103, 3122
SmoI	CTYRAG	4 cut(s)	181, 244, 1103, 3122
SnaBI	TACGTA	1 cut(s)	500
SseBI	AGGCCT	1 cut(s)	2045
SsiI	CCGC	5 cut(s)	56, 1799, 1903, 2057, 2801
SspI	AATATT	2 cut(s)	2086, 2691
SspMI	CTAG	9 cut(s)	141, 378, 920, 1539, 1610, 1640, 2199, 2664, 2783
SstI	GAGCTC	1 cut(s)	1104
StuI	AGGCCT	1 cut(s)	2045
StyD4I	CCNGG	7 cut(s)	83, 199, 820, 907, 1038, 1971, 2667
StyI	CCWWGG	3 cut(s)	1342, 2198, 2866
TaiI	ACGT	7 cut(s)	502, 622, 1406, 2032, 2294, 2357, 3106
TaqI	TCGA	8 cut(s)	79, 182, 245, 698, 953, 1702, 2209, 2529
TatI	WGTACW	3 cut(s)	1636, 1803, 1820
TauI	GCSGC	1 cut(s)	1905
TfiI	GAWTC	8 cut(s)	5, 739, 790, 1316, 2024, 2408, 2438, 2920
Tru1I	TTAA	8 cut(s)	327, 456, 1250, 1659, 1941, 2139, 2517, 2805
Tru9I	TTAA	8 cut(s)	327, 456, 1250, 1659, 1941, 2139, 2517, 2805
TscAI	CASTG	8 cut(s)	132, 241, 262, 1126, 1229, 1286, 1992, 2705
TseFI	GTSAC	3 cut(s)	987, 1396, 2120
TseI	GCWGC	8 cut(s)	58, 773, 1238, 1897, 2180, 2728, 2786, 2885
Tsp45I	GTSAC	3 cut(s)	987, 1396, 2120
TspGWI	ACGGA	1 cut(s)	1534
TspRI	CASTG	8 cut(s)	132, 241, 262, 1126, 1229, 1286, 1992, 2705
Van91I	CCANNNNNTGG	1 cut(s)	1241
VneI	GTGCAC	1 cut(s)	2952
VpaK11BI	GGWCC	2 cut(s)	1356, 1604
VspI	ATTAAT	2 cut(s)	1250, 1941
XagI	CCTNNNNNAGG	1 cut(s)	219
XapI	RAATTY	8 cut(s)	249, 612, 1436, 1846, 1963, 2753, 2810, 3024
XceI	RCATGY	2 cut(s)	1146, 2892
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1438
XhoI	CTCGAG	2 cut(s)	181, 244
XmaJI	CCTAGG	1 cut(s)	2198
XmiI	GTMKAC	3 cut(s)	1338, 1977, 3114
XspI	CTAG	9 cut(s)	141, 378, 920, 1539, 1610, 1640, 2199, 2664, 2783
ZrmI	AGTACT	1 cut(s)	1638

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.