FvH4_4g37270

recombinational repair

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0003214
Physical Location & Seq
Reverse (-)
33807443 .. 33814453
7011 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g37270.t3

Sequence Viewer

Length: 3048 bp
ATGTTTGGTGATGTGGATCACCTTCAGGATTTGTTTGAGTCCACTTGGAGATGTTGCTCGTTTTTACGCGGACGGATAGGCAGTTTAATATCAAAGCATTGTGCAGATGTGACTGGCCTACAATCAGTGAACTATCTTTCTAAACTAATTAAAGAAAGGGAGCATCGACTTTCAACCTCCATGTCTCAAGCAACGTTCATAGATATTAGTTCATCTGATAGTGATTTAGAAGAGATAGAACCTGTTGGTAGAAGACCTAATCCAACTTGGTTATCTGCACCTGCATCTGGTTCAAATTCAAGGAGCCAAGACTATGCTGACAAGTCTAGAAAGGTGCCTTCTCCTATAAGAGCACATGTTTCCAATGGAATCTCTCCTAATTATAACCACCACAGACAGGTGTTAGAAAAGTTTCATCCCAGTTCGAGTGCTGACATAAGAGCCTCAAATCAGCAGGTTTCGCGAGCTGATAGTTCTACGTATTTCTCACAAAATGGAAATGGTATAAACCCTGCAGTAGATAGAAGGGCCCACAATCAGTTCCGTGACACCACCAACAAGGGCTTTATGCGAGACCATTCAATCAGGGGGAATGATGATTATATGTATGATAGAAGGCCTCCATTTGTAAAGTCATCTTCTACTTCCCAGATTCCTAGTACAAGTGAGCCACAATACCCTTTGGGAATAGGTGAACAAAGGGTTGCTGAAAGTGACGAGAGGCTGATATATCATGCGGCACTACAGGATCTTAATCAACCAAAAGTTGAAGCTGCTTTACCTGATGGTCTTCTGTCGGTCTCTCTTCTACGTCATCAGAAAATTGCTTTGGCATGGATGCTTCAGAAGGAGACGAGAAGCTTGCATTGTCTAGGTGGAATCTTAGCTGATGATCAGGGCCTTGGTAAGACAATCTCAATGATTGCACTTATACAAATGCAGAGGTCTTTGCAATCCAAGTCAAAACCTGAACACTCGGACAATAATAAAACTGAAGCTTTGAATTTGGATGATGATGAGGACCATGTTGGTTGTGGTTTGGATAAAGTCAACAATACTGAAGAATCTGATCTTAAATCAACTCGAGAAGCTAGTACCTCCGCACAGCCATTCAAAAAGAAGAGGCCCGCTGCTGGTACTTTGGTTGTTTGTCCGGCAAGTGTTCTTCGACAGTGGGCTAGGGAGCTGGATGAGAAGGTTGCAGAGGAAGCAAAATTGTCTGTACTTGTTTATCATGGAGGCAGCAGAACAAGAAATCCTGAAGAACTTGCTGGCTATGATGTGGTTCTGACGACATATGCTATTGTAACTAATGAAGTCCCAAAGCAACCTTTAGTTGACGAGGATGAGGCAGATGAGAAAAATGTGGAGAAGTATGGTTTATCTTCTGATTTTTCAATCAACAAGAAGAGAAAAAAGGCTTCTTTTGTTAGTAAGAAGGGAAAGAAAGGTAGGAAAGGATTTGACAGTTCCTCTTTTGAATGTGGTTCTGGGCCACTTGCAAGGGTTGGTTGGTCTAGGGTGATACTAGATGAAGCGCAAACCATTAAGAATCACAGAACTCAAGTGGCTAGAGCCTGCTGTAGTCTTCGAGCCAAAACAAGATGGTGTCTATCTGGTACACCAATACAAAATACAATTGATGATTTGTACAGTTACTTCAGATTTCTGAAATATGATCCCTACGCTGTGTATAAATCATTTTACTCTACCATTAAGGTTCCGATATCCAGAAATTCACTCCAAGGATACAAGAAACTCCAAGCTGTTCTGAGAGCTATTATGCTGCGCCGAACAAAAGGAACAATGATTGATGGGCAACCTATAATTAATCTACCGCCGAAAACAATCAACCTGAGTAAAGTGGAGTTCTCGGTGGAGGAGAGGGCCTTCTATACCAAATTAGAAGCTGATTCACGCTCGCAATTCAAGGCATATGCTGCTGCTGGCACGGTAAATCAAAACTATGCAAATATCCTTTTGATGCTTTTGCGCCTTCGGCAGGCTTGTGATCACCCACTGCTTGTTAAAGGATACGACACTGACTGTGTTGGGAAAGATTCTGTGGCTATGGCAAGTACACTATCTAGGGAGATGCTTATCGAACTATTGAATGCCCTGGAAAGGGCCGAGGCCATGTGTCGTGTATGCAATGATGTGCTTGAGAACCCTGTTGTTACGTTGTGCGGCCATGTTTTCTGCTATCAGTGTGTGTCAGAATATATGACTGGTGATGACAGTATGTGCCCTGCTACGGAATGCAAAAAACAAGTCGGTCCTGATGTTGTTTTCTCTGAATCCACTCTAATTAGTTGCCTCTCTAAGGATCTTGATGGTGGTTCAACGAATTCTCAGTTGATTGAGAACCCAGTAGTGGTACAGAATGAGTACACTTCATCTAAAGTCAAAGCTGTTGTTGAGATAATACAGTCACACTGCAAGTCAAAAAGCCCCAATTTGGAGCAATATAATGCTGCAGGATGCAGTAGAGACTCTTTTTTTAAAAATGAAAACCCAGATTCAGGCGTCAATGTTGTGAAGCACACAACCGTAGTTTCAAACTCACCAACTGATGGACCAATTAAAACAATCATTTTCTCTCAATGGACTAAGATGTTGGATTTAGTTGAGAGTGCAATGAACGAGTACTGTATACAATATAGAAGGCTTGATGGCACAATGACTCTAACATCCAGAGACAGGGCTGTCAAAGAATTCAACACTGATCCTGAGGTCACTGTTATGCTTATGTCACTCAAGGCAGGAAACCTTGGTCTAAACATGGTTGCTGCATGTCATGTTATCCTTTTGGATCTTTGGTGGAATCCGACGACTGAGGATCAAGCTGTTGATAGGGCACACAGAATTGGACAAACCCGGCCGGTTACTGTAACTCGACTTACTATTAAGGATACAGTAGAGGACAGGATATTAGCTCTACAGGACGAGAAGAGAAAAATGGTTGCATCTGCTTTTGGTGAAGACAATAGCGGGGGCTCCGGAACTCGTCTGACAGTTGAGGATCTCAGATATCTATTCATGGTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000228 GO:0000278 GO:0000724 GO:0000725 GO:0000785 GO:0000790 GO:0003674 GO:0003678 GO:0003824 GO:0004003 GO:0004386 GO:0004842 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006281 GO:0006302 GO:0006304 GO:0006305 GO:0006306 GO:0006310 GO:0006464 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007154 GO:0008026 GO:0008094 GO:0008150 GO:0008152 GO:0008270 GO:0009058 GO:0009059 GO:0009292 GO:0009294 GO:0009605 GO:0009892 GO:0009894 GO:0009895 GO:0009987 GO:0009991 GO:0010468 GO:0010605 GO:0010629 GO:0016043 GO:0016070 GO:0016458 GO:0016462 GO:0016567 GO:0016740 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019222 GO:0019538 GO:0019787 GO:0022402 GO:0030162 GO:0031047 GO:0031323 GO:0031324 GO:0031329 GO:0031330 GO:0031668 GO:0031974 GO:0031981 GO:0032259 GO:0032268 GO:0032269 GO:0032392 GO:0032434 GO:0032435 GO:0032446 GO:0032508 GO:0033260 GO:0033554 GO:0034641 GO:0034645 GO:0036211 GO:0042176 GO:0042177 GO:0042262 GO:0042623 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0044728 GO:0044764 GO:0044786 GO:0045003 GO:0045005 GO:0045861 GO:0046483 GO:0046872 GO:0046914 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0051276 GO:0051704 GO:0051716 GO:0060255 GO:0061136 GO:0061630 GO:0061659 GO:0065007 GO:0070013 GO:0070035 GO:0070647 GO:0071103 GO:0071496 GO:0071704 GO:0071840 GO:0080090 GO:0080188 GO:0090304 GO:0140083 GO:0140096 GO:0140097 GO:1901360 GO:1901564 GO:1901576 GO:1901799 GO:1902298 GO:1902969 GO:1903047 GO:1903050 GO:1903051 GO:1903362 GO:1903363 GO:1990505 GO:2000058 GO:2000059
KEGG Pathways
Metabolic & Signaling
ko04918 map04918
Pfam Domains
Protein Families
Helicase_C SNF2_N zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3

Protein Analysis

1016

Amino Acids

113.18

Weight (kDa)

7.88

Isoelectric Point (pI)

47.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SNF2-rel_dom PF00176 223 - 624 2.6e-66 SNF2-related domain
zf-C3HC4_2 PF13923 664 - 701 2e-10 Zinc finger, C3HC4 type (RING finger)
zf-C3HC4 PF00097 665 - 701 1.2e-07 Zinc finger, C3HC4 type (RING finger)
zf-C3HC4_4 PF15227 665 - 701 8.6e-07 zinc finger of C3HC4-type, RING
zf-RING_UBOX PF13445 665 - 701 1e-06 RING-type zinc-finger
Helicase_C PF00271 813 - 908 1.2e-19 Helicase conserved C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 384
AarI CACCTGC 1 cut(s) 289
AasI GACNNNNNNGTC 1 cut(s) 2705
Acc36I ACCTGC 2 cut(s) 289, 445
AccB1I GGYRCC 1 cut(s) 334
AccB7I CCANNNNNTGG 1 cut(s) 2573
AccI GTMKAC 1 cut(s) 2653
AccII CGCG 2 cut(s) 69, 463
AccIII TCCGGA 1 cut(s) 2999
AciI CCGC 7 cut(s) 69, 737, 1101, 1128, 1838, 2187, 2991
AclI AACGTT 1 cut(s) 194
AclWI GGATC 8 cut(s) 24, 756, 1673, 2334, 2720, 2820, 2847, 3030
AcoI YGGCCR 2 cut(s) 2188, 2879
AcsI RAATTY 5 cut(s) 295, 1003, 1735, 2347, 2714
AcuI CTGAAG 6 cut(s) 8, 827, 1014, 1080, 1281, 1645
AcyI GRCGYC 1 cut(s) 2526
AflIII ACRYGT 1 cut(s) 355
AjnI CCWGG 1 cut(s) 2118
AjuI GAANNNNNNNTTGG 2 cut(s) 812, 844
AloI GAACNNNNNNTCC 2 cut(s) 1240, 1272
Alw21I GWGCWC 1 cut(s) 355
Alw26I GTCTC 6 cut(s) 189, 567, 805, 845, 2484, 2691
AlwI GGATC 8 cut(s) 24, 756, 1673, 2334, 2720, 2820, 2847, 3030
Ama87I CYCGRG 1 cut(s) 1083
Aor13HI TCCGGA 1 cut(s) 2999
ApaI GGGCCC 1 cut(s) 532
ApeKI GCWGC 8 cut(s) 773, 1130, 1242, 1786, 1940, 1943, 2474, 2789
ApoI RAATTY 5 cut(s) 295, 1003, 1735, 2347, 2714
ArsI GACNNNNNNTTYG 2 cut(s) 2256, 2288
AseI ATTAAT 1 cut(s) 1830
Asp700I GAANNNNTTC 1 cut(s) 411
AspLEI GCGC 3 cut(s) 1540, 1791, 1995
AsuC2I CCSGG 1 cut(s) 2878
AsuHPI GGTGA 8 cut(s) 11, 20, 704, 1534, 2006, 2243, 2556, 2990
AvaI CYCGRG 1 cut(s) 1083
AvaII GGWCC 3 cut(s) 1021, 2276, 2576
AxyI CCTNAGG 1 cut(s) 2730
BaeGI GKGCMC 3 cut(s) 532, 2249, 2860
BaeI ACNNNNGTAYC 2 cut(s) 1128, 1161
BanI GGYRCC 1 cut(s) 334
BanII GRGCYC 2 cut(s) 532, 2999
BarI GAAGNNNNNNTAC 4 cut(s) 762, 794, 1643, 1675
BbsI GAAGAC 4 cut(s) 259, 782, 1580, 2988
Bbv12I GWGCWC 1 cut(s) 355
BbvI GCAGC 8 cut(s) 760, 1117, 1254, 1773, 1927, 1930, 2461, 2776
BccI CCATC 6 cut(s) 779, 1599, 1808, 2327, 2567, 2666
BcgI CGANNNNNNTGC 2 cut(s) 844, 878
BciT130I CCWGG 1 cut(s) 2120
BciVI GTATCC 3 cut(s) 1742, 2027, 2905
BclI TGATCA 2 cut(s) 892, 2011
BcnI CCSGG 1 cut(s) 2878
BcoDI GTCTC 6 cut(s) 189, 567, 805, 845, 2484, 2691
BfmI CTRYAG 5 cut(s) 513, 743, 1582, 2475, 2939
BfuAI ACCTGC 2 cut(s) 289, 445
BfuI GTATCC 3 cut(s) 1742, 2027, 2905
BmcAI AGTACT 1 cut(s) 2648
Bme1390I CCNGG 2 cut(s) 2120, 2878
Bme18I GGWCC 3 cut(s) 1021, 2276, 2576
BmeT110I CYCGRG 1 cut(s) 1083
BmiI GGNNCC 5 cut(s) 305, 336, 530, 1722, 2998
BmrFI CCNGG 2 cut(s) 2120, 2878
BmrI ACTGGG 2 cut(s) 414, 2363
BmsI GCATC 7 cut(s) 172, 293, 828, 1974, 2085, 2471, 2975
BmuI ACTGGG 2 cut(s) 414, 2363
BpiI GAAGAC 4 cut(s) 259, 782, 1580, 2988
BpuEI CTTGAG 4 cut(s) 171, 1548, 2183, 2741
BpuMI CCSGG 1 cut(s) 2878
BsaAI YACGTR 1 cut(s) 480
BsaBI GATNNNNATC 3 cut(s) 15, 753, 2099
BsaHI GRCGYC 1 cut(s) 2526
BsaI GGTCTC 2 cut(s) 567, 805
BsaJI CCNNGG 5 cut(s) 901, 1744, 2118, 2130, 2770
BsaWI WCCGGW 1 cut(s) 2999
Bse118I RCCGGY 1 cut(s) 2881
Bse1I ACTGG 4 cut(s) 118, 420, 2233, 2369
Bse21I CCTNAGG 1 cut(s) 2730
Bse3DI GCAATG 2 cut(s) 2158, 2643
Bse8I GATNNNNATC 3 cut(s) 15, 753, 2099
BseAI TCCGGA 1 cut(s) 2999
BseBI CCWGG 1 cut(s) 2120
BseDI CCNNGG 5 cut(s) 901, 1744, 2118, 2130, 2770
BseGI GGATG 7 cut(s) 415, 843, 1015, 1195, 1351, 2486, 2690
BseJI GATNNNNATC 3 cut(s) 15, 753, 2099
BseMI GCAATG 2 cut(s) 2158, 2643
BseMII CTCAG 6 cut(s) 1763, 1847, 2366, 2721, 2826, 3040
BseNI ACTGG 4 cut(s) 118, 420, 2233, 2369
BseRI GAGGAG 1 cut(s) 1895
BseSI GKGCMC 3 cut(s) 532, 2249, 2860
BseX3I CGGCCG 1 cut(s) 2879
BseXI GCAGC 8 cut(s) 760, 1117, 1254, 1773, 1927, 1930, 2461, 2776
BsgI GTGCAG 2 cut(s) 123, 261
Bsh1236I CGCG 2 cut(s) 69, 463
Bsh1285I CGRYCG 1 cut(s) 2882
BshNI GGYRCC 1 cut(s) 334
BsiEI CGRYCG 1 cut(s) 2882
BsiHKAI GWGCWC 1 cut(s) 355
BsiHKCI CYCGRG 1 cut(s) 1083
BsiSI CCGG 4 cut(s) 1154, 2878, 2882, 3000
BslFI GGGAC 1 cut(s) 1304
BsmAI GTCTC 6 cut(s) 189, 567, 805, 845, 2484, 2691
BsmBI CGTCTC 1 cut(s) 845
BsmFI GGGAC 1 cut(s) 1304
BsmI GAATGC 2 cut(s) 2119, 2264
Bso31I GGTCTC 2 cut(s) 567, 805
BsoBI CYCGRG 1 cut(s) 1083
Bsp120I GGGCCC 1 cut(s) 528
Bsp1286I GDGCHC 5 cut(s) 355, 532, 2249, 2860, 2999
Bsp13I TCCGGA 1 cut(s) 2999
Bsp1407I TGTACA 1 cut(s) 1650
Bsp68I TCGCGA 1 cut(s) 463
BspACI CCGC 7 cut(s) 69, 737, 1101, 1128, 1838, 2187, 2991
BspCNI CTCAG 6 cut(s) 1764, 1848, 2365, 2722, 2827, 3039
BspEI TCCGGA 1 cut(s) 2999
BspFNI CGCG 2 cut(s) 69, 463
BspLI GGNNCC 5 cut(s) 305, 336, 530, 1722, 2998
BspMAI CTGCAG 2 cut(s) 517, 2479
BspMI ACCTGC 2 cut(s) 289, 445
BspPI GGATC 8 cut(s) 24, 756, 1673, 2334, 2720, 2820, 2847, 3030
BspT107I GGYRCC 1 cut(s) 334
BspTNI GGTCTC 2 cut(s) 567, 805
BsrDI GCAATG 2 cut(s) 2158, 2643
BsrFI RCCGGY 1 cut(s) 2881
BsrGI TGTACA 1 cut(s) 1650
BsrI ACTGG 4 cut(s) 118, 420, 2233, 2369
BssAI RCCGGY 1 cut(s) 2881
BssECI CCNNGG 5 cut(s) 901, 1744, 2118, 2130, 2770
BssNAI GTATAC 1 cut(s) 2654
BssNI GRCGYC 1 cut(s) 2526
BssT1I CCWWGG 3 cut(s) 901, 1744, 2770
Bst1107I GTATAC 1 cut(s) 2654
Bst2UI CCWGG 1 cut(s) 2120
Bst6I CTCTTC 5 cut(s) 225, 810, 1115, 1403, 2945
BstACI GRCGYC 1 cut(s) 2526
BstAPI GCANNNNNTGC 1 cut(s) 1940
BstAUI TGTACA 1 cut(s) 1650
BstBAI YACGTR 1 cut(s) 480
BstC8I GCNNGC 8 cut(s) 465, 863, 1128, 1273, 1579, 1922, 1948, 2004
BstDEI CTNAG 9 cut(s) 883, 1772, 1856, 2322, 2352, 2610, 2730, 2835, 3026
BstENI CCTNNNNNAGG 2 cut(s) 2000, 2321
BstF5I GGATG 7 cut(s) 415, 843, 1015, 1195, 1351, 2486, 2690
BstFNI CGCG 2 cut(s) 69, 463
BstHHI GCGC 3 cut(s) 1540, 1791, 1995
BstMAI GTCTC 6 cut(s) 189, 567, 805, 845, 2484, 2691
BstMCI CGRYCG 1 cut(s) 2882
BstMWI GCNNNNNNNGC 4 cut(s) 460, 1208, 1940, 1999
BstNI CCWGG 1 cut(s) 2120
BstNSI RCATGY 2 cut(s) 359, 2796
BstSCI CCNGG 2 cut(s) 2118, 2876
BstSFI CTRYAG 5 cut(s) 513, 743, 1582, 2475, 2939
BstSLI GKGCMC 3 cut(s) 532, 2249, 2860
BstSNI TACGTA 1 cut(s) 480
BstUI CGCG 2 cut(s) 69, 463
BstV1I GCAGC 8 cut(s) 760, 1117, 1254, 1773, 1927, 1930, 2461, 2776
BstV2I GAAGAC 4 cut(s) 259, 782, 1580, 2988
BstX2I RGATCY 4 cut(s) 748, 2326, 2812, 3022
BstYI RGATCY 4 cut(s) 748, 2326, 2812, 3022
BstZ17I GTATAC 1 cut(s) 2654
BstZI CGGCCG 1 cut(s) 2879
Bsu36I CCTNAGG 1 cut(s) 2730
BsuI GTATCC 3 cut(s) 1742, 2027, 2905
BtsCI GGATG 7 cut(s) 415, 843, 1015, 1195, 1351, 2486, 2690
BtsI GCAGTG 2 cut(s) 2018, 2434
BtsIMutI CAGTG 8 cut(s) 132, 1178, 2018, 2040, 2213, 2434, 2721, 2736
BtuMI TCGCGA 1 cut(s) 463
BveI ACCTGC 2 cut(s) 289, 445
Cac8I GCNNGC 8 cut(s) 465, 863, 1128, 1273, 1579, 1922, 1948, 2004
CfoI GCGC 3 cut(s) 1540, 1791, 1995
Cfr10I RCCGGY 1 cut(s) 2881
CseI GACGC 1 cut(s) 2515
DdeI CTNAG 9 cut(s) 883, 1772, 1856, 2322, 2352, 2610, 2730, 2835, 3026
DraI TTTAAA 1 cut(s) 2503
DrdI GACNNNNNNGTC 1 cut(s) 2705
DseDI GACNNNNNNGTC 1 cut(s) 2705
EaeI YGGCCR 2 cut(s) 2188, 2879
EagI CGGCCG 1 cut(s) 2879
Eam1104I CTCTTC 5 cut(s) 225, 810, 1115, 1403, 2945
EarI CTCTTC 5 cut(s) 225, 810, 1115, 1403, 2945
EclXI CGGCCG 1 cut(s) 2879
Eco105I TACGTA 1 cut(s) 480
Eco130I CCWWGG 3 cut(s) 901, 1744, 2770
Eco147I AGGCCT 1 cut(s) 619
Eco24I GRGCYC 2 cut(s) 532, 2999
Eco31I GGTCTC 2 cut(s) 567, 805
Eco32I GATATC 2 cut(s) 1728, 3032
Eco47I GGWCC 3 cut(s) 1021, 2276, 2576
Eco52I CGGCCG 1 cut(s) 2879
Eco57I CTGAAG 6 cut(s) 8, 827, 1014, 1080, 1281, 1645
Eco81I CCTNAGG 1 cut(s) 2730
Eco88I CYCGRG 1 cut(s) 1083
EcoNI CCTNNNNNAGG 2 cut(s) 2000, 2321
EcoO109I RGGNCCY 3 cut(s) 528, 898, 1887
EcoRI GAATTC 2 cut(s) 2347, 2714
EcoRII CCWGG 1 cut(s) 2118
EcoRV GATATC 2 cut(s) 1728, 3032
EcoT14I CCWWGG 3 cut(s) 901, 1744, 2770
EcoT38I GRGCYC 2 cut(s) 532, 2999
ErhI CCWWGG 3 cut(s) 901, 1744, 2770
Esp3I CGTCTC 1 cut(s) 845
FaqI GGGAC 1 cut(s) 1304
FauI CCCGC 2 cut(s) 1135, 2984
FauNDI CATATG 2 cut(s) 1297, 1936
FbaI TGATCA 2 cut(s) 892, 2011
FblI GTMKAC 1 cut(s) 2653
FokI GGATG 7 cut(s) 402, 850, 1022, 1202, 1358, 2493, 2677
FriOI GRGCYC 2 cut(s) 532, 2999
GlaI GCGC 3 cut(s) 1539, 1790, 1994
HapII CCGG 4 cut(s) 1154, 2878, 2882, 3000
HgaI GACGC 1 cut(s) 2515
HhaI GCGC 3 cut(s) 1540, 1791, 1995
Hin1I GRCGYC 1 cut(s) 2526
Hin6I GCGC 3 cut(s) 1538, 1789, 1993
HinP1I GCGC 3 cut(s) 1538, 1789, 1993
HincII GTYRAC 2 cut(s) 1051, 1339
HindII GTYRAC 2 cut(s) 1051, 1339
HindIII AAGCTT 2 cut(s) 859, 996
HpaII CCGG 4 cut(s) 1154, 2878, 2882, 3000
HphI GGTGA 8 cut(s) 11, 20, 704, 1534, 2006, 2243, 2556, 2990
Hpy166II GTNNAC 9 cut(s) 42, 130, 695, 1051, 1339, 1622, 2081, 2391, 2654
Hpy8I GTNNAC 9 cut(s) 42, 130, 695, 1051, 1339, 1622, 2081, 2391, 2654
Hpy99I CGWCG 1 cut(s) 2833
HpyCH4IV ACGT 4 cut(s) 194, 479, 811, 2180
HpyF10VI GCNNNNNNNGC 4 cut(s) 460, 1208, 1940, 1999
HpyF3I CTNAG 9 cut(s) 883, 1772, 1856, 2322, 2352, 2610, 2730, 2835, 3026
HpySE526I ACGT 4 cut(s) 194, 479, 811, 2180
Hsp92I GRCGYC 1 cut(s) 2526
HspAI GCGC 3 cut(s) 1538, 1789, 1993
Kpn2I TCCGGA 1 cut(s) 2999
Ksp22I TGATCA 2 cut(s) 892, 2011
LmnI GCTCC 5 cut(s) 160, 303, 1183, 2461, 3002
Lsp1109I GCAGC 8 cut(s) 760, 1117, 1254, 1773, 1927, 1930, 2461, 2776
LweI GCATC 7 cut(s) 172, 293, 828, 1974, 2085, 2471, 2975
MaeII ACGT 4 cut(s) 194, 479, 811, 2180
MfeI CAATTG 1 cut(s) 1638
MflI RGATCY 4 cut(s) 748, 2326, 2812, 3022
MhlI GDGCHC 5 cut(s) 355, 532, 2249, 2860, 2999
MlyI GAGTC 3 cut(s) 47, 2486, 2677
MmeI TCCRAC 3 cut(s) 287, 2598, 2852
MroI TCCGGA 1 cut(s) 2999
MroXI GAANNNNTTC 1 cut(s) 411
MslI CAYNNNNRTG 1 cut(s) 2741
MspA1I CMGCKG 1 cut(s) 1130
MspI CCGG 4 cut(s) 1154, 2878, 2882, 3000
MspR9I CCNGG 2 cut(s) 2120, 2878
MunI CAATTG 1 cut(s) 1638
Mva1269I GAATGC 2 cut(s) 2119, 2264
MvaI CCWGG 1 cut(s) 2120
MvnI CGCG 2 cut(s) 69, 463
MwoI GCNNNNNNNGC 4 cut(s) 460, 1208, 1940, 1999
NciI CCSGG 1 cut(s) 2878
NdeI CATATG 2 cut(s) 1297, 1936
NlaIV GGNNCC 5 cut(s) 305, 336, 530, 1722, 2998
NmeAIII GCCGAG 1 cut(s) 2155
NmuCI GTSAC 6 cut(s) 109, 545, 713, 2430, 2734, 2751
NruI TCGCGA 1 cut(s) 463
NspI RCATGY 2 cut(s) 359, 2796
PaeR7I CTCGAG 1 cut(s) 1083
PaqCI CACCTGC 1 cut(s) 289
PceI AGGCCT 1 cut(s) 619
PciI ACATGT 1 cut(s) 355
PctI GAATGC 2 cut(s) 2119, 2264
PdmI GAANNNNTTC 1 cut(s) 411
PflMI CCANNNNNTGG 1 cut(s) 2573
PleI GAGTC 3 cut(s) 46, 2486, 2677
PpsI GAGTC 3 cut(s) 46, 2486, 2677
Ppu21I YACGTR 1 cut(s) 480
PscI ACATGT 1 cut(s) 355
PshBI ATTAAT 1 cut(s) 1830
PsiI TTATAA 1 cut(s) 384
Psp1406I AACGTT 1 cut(s) 194
Psp6I CCWGG 1 cut(s) 2118
PspGI CCWGG 1 cut(s) 2118
PspN4I GGNNCC 5 cut(s) 305, 336, 530, 1722, 2998
PspOMI GGGCCC 1 cut(s) 528
PstI CTGCAG 2 cut(s) 517, 2479
PsuI RGATCY 4 cut(s) 748, 2326, 2812, 3022
RruI TCGCGA 1 cut(s) 463
RseI CAYNNNNRTG 1 cut(s) 2741
ScaI AGTACT 1 cut(s) 2648
SchI GAGTC 3 cut(s) 47, 2486, 2677
ScrFI CCNGG 2 cut(s) 2120, 2878
SduI GDGCHC 5 cut(s) 355, 532, 2249, 2860, 2999
SfaNI GCATC 7 cut(s) 172, 293, 828, 1974, 2085, 2471, 2975
SfcI CTRYAG 5 cut(s) 513, 743, 1582, 2475, 2939
Sfr274I CTCGAG 1 cut(s) 1083
SinI GGWCC 3 cut(s) 1021, 2276, 2576
SlaI CTCGAG 1 cut(s) 1083
SmiMI CAYNNNNRTG 1 cut(s) 2741
SmlI CTYRAG 5 cut(s) 186, 1083, 1563, 2162, 2756
SmoI CTYRAG 5 cut(s) 186, 1083, 1563, 2162, 2756
SnaBI TACGTA 1 cut(s) 480
SseBI AGGCCT 1 cut(s) 619
SsiI CCGC 7 cut(s) 69, 737, 1101, 1128, 1838, 2187, 2991
StuI AGGCCT 1 cut(s) 619
StyD4I CCNGG 2 cut(s) 2118, 2876
StyI CCWWGG 3 cut(s) 901, 1744, 2770
TaiI ACGT 4 cut(s) 197, 482, 814, 2183
TaqI TCGA 7 cut(s) 166, 425, 1084, 1168, 1591, 2103, 2896
TaqII GACCGA 2 cut(s) 787, 2264
TatI WGTACW 6 cut(s) 659, 1222, 1650, 2078, 2388, 2646
TauI GCSGC 2 cut(s) 740, 2190
TscAI CASTG 8 cut(s) 132, 1178, 2025, 2047, 2213, 2441, 2728, 2743
TseFI GTSAC 6 cut(s) 109, 545, 713, 2430, 2734, 2751
TseI GCWGC 8 cut(s) 773, 1130, 1242, 1786, 1940, 1943, 2474, 2789
Tsp45I GTSAC 6 cut(s) 109, 545, 713, 2430, 2734, 2751
TspDTI ATGAA 9 cut(s) 187, 201, 404, 1329, 1548, 2385, 2523, 2654, 3028
TspGWI ACGGA 3 cut(s) 88, 533, 2270
TspRI CASTG 8 cut(s) 132, 1178, 2025, 2047, 2213, 2441, 2728, 2743
Van91I CCANNNNNTGG 1 cut(s) 2573
VpaK11BI GGWCC 3 cut(s) 1021, 2276, 2576
VspI ATTAAT 1 cut(s) 1830
XagI CCTNNNNNAGG 2 cut(s) 2000, 2321
XapI RAATTY 5 cut(s) 295, 1003, 1735, 2347, 2714
XbaI TCTAGA 1 cut(s) 326
XceI RCATGY 2 cut(s) 359, 2796
XcmI CCANNNNNNNNNTGG 1 cut(s) 1031
XhoI CTCGAG 1 cut(s) 1083
XmiI GTMKAC 1 cut(s) 2653
XmnI GAANNNNTTC 1 cut(s) 411
ZrmI AGTACT 1 cut(s) 2648
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.