MD00G1127300.v1.1

recombinational repair

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
OG0003214
Physical Location & Seq
Reverse (-)
26964239 .. 26971745
7507 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1127300.v1.1.491

Sequence Viewer

Length: 2907 bp
ATGGCTCAAAGGGAATTTATAGATATTAGTTCATCGGATAGTGAATTAGAGATAGAAGAAAGGGAATATGGCAACAGCAGAGTTCTTCCAAGCTCGCTCTCTGGTCCTGGCTCAAATCCAAGGAGTAGAGATTATTCTGGGCAGTCTAGAAAGGTGCCTTCTCCTAGAAGAGCATATGCTTCTAATGGCAACTCTCCTAATATTAATCAGCACACACAGGTGAAACAGAATTTTAATCCCAGTTCAAGTGATGATATGAGAACCTCAAATCAACATGCTACTCGAGCACATAATGGTTATGCGGAACGGCCTCAGAGTAATCATTCACAAATTTATAATATTTCTGTTAAGGACTATGAAGCTCATAAGAGGACCCTTCCGCCGTCTATGCAGCTATTGGCACCAAGTACTTATGCAACCAATGGCAAGGGCCTTATGAGAGACTATTCAAGTAGGGGCTATGACAACGAATTTAATAGGTCTGAGAGCAGTGGGAGTAGGGGCCAGCCTCCCTCTTTCATGCATGGAAAGTCATTTTCTACTTCACAGTTTGCTAGTTCAAATGACCCTGCATACCATGGTGGGACAGGTGACGATAGGGTGGCTGGCAGTGATGAGAGACTGATATATCAAGCGGCATTAGAGGATCTCAATCAACCAAAAGTTGAAGCTACTTTACCTGATGGTCTTCTGTCGGTCCCTCTTCTACGACATCAGAAAATTGCTCTAGCATGGATGCTTCAAAAGGAAACTAGAAGTCTGCATTGTCTAGGTGGAATCTTAGCAGATGATCAGGGCCTTGGTAAGACCATTTCAATGATTTCCCTTATACAAATGCAGAAGTTTTTGGATTCAAAATCAAAATCTAGAGAGTTAGGCAATCAGAAAACTGAAGCTTTAAATTTGGATGATGATGAGGACAATCCCAACGGTGGTTTGGATAAATTGAATAAAACTGAGCAACCTGATCATCTTCTATCAATTCCAGAAGTTAGTACATCTTCACGGTCCATCAGAAAGCAGAGGCCAGCAGCGGGTACATTGGTTGTGTGTCCAGCAAGTGTTCTTCGACAGTGGGCTAGGGAGCTGGATGAAAAGGTTGCAGAGGAAGCAAAGCTGCGTGTCCTTATTTATCATGGTGGCAGCCGGACGAAGAATCCTGAAGAACTGGCTAGCTATGACGTGATTCTCACAACATATGCTATTGTAACCAATGAAGTCCCAAAACAACCTTTAGTTGATGACGATGAGCCTGATGAGAAAAATGGGGAAACTTATGGAGTACATTCTGATTTTTCAAGTAATAAGAAGAGAAAAAAGGCTTCGGTTGTTAATAAGAAGGGAAAGAGGGGCAAAAAAGGAATTGACAGTTCATCTATTGATTGCGGTTCTGGTGCACTTGCAAAAGTGGGTTGGTTTAGGGTGATACTAGATGAAGCTCAGACGATTAAGAATCACAGAACTCAAGTGGCAAGAGCGTGTTGTAGCCTTCGAGCAAAAAGAAGGTGGTGTTTGTCTGGTACTCCTATACAAAATACAATTGATGATTTATACAGTTACTTCAGATTTCTTAGATATGACCCCTATGCTGTATATAAGTCATTTTACAGTACCATTAAGGTTCCAATATCGAGAAATTCAATCCAAGGTTATAAGAAGCTCCAGGCAGTTCTGAGGGCTATAATGTTGCGTCGAACAAAAGGAACATTGATCAATGGGCAACCTATAATTGAGTTACCACCAAAAACAATAAACTTGAGTAAAGTGGAGTTCTCATCTGAGGAGCGTGCTTTCTATACCAAGCTAGAAGCCGATTCACGCACTAAGTTCAAGGCATATGCCGCTGCTGGCACAGTGAATCAAAACTATGCAAATATTCTTTTGATGCTTTTACGCCTCCGGCAAGCTTGTGACCACCCTCAGCTTGTTAAAGCATATGACTCTGACTGTGTCGGGAAAGATTCTGTGCAAATGGCAAGGCGACTCCCAAAGGATATGATTTCCCATCTTTTGCATCTCCTGGAAACTTCATTGGCCATTTGTCGTGTATGCAAAGATCCACCTGAAGGCCCTGTTGTTACTATGTGTGGCCATGTATTCTGCTATCAGTGTGTTTCAGAACACTTGACGGGTGATGACAATACATGCCCTGATGCTGAATGTAAAGAACAAGTTGGTTCTGATGTTGTTTTCTCCAAATCCACTCTCATAAGTTGCCTCTCCAATAATCTTGATGGTACTCCGATGAATTCTGAGTTGGGTGAGAAATCAATTGTGTTACAGAATGAGTATAGTTCATCTAAAGTCAGAGCTATTATTGAGATTTTGCAGTCACATTTGGAACATAACTCTACTGGAAGCAGTGGAGACCCTGCTTTTGGAACCGAAATCACAGATAGTATATATTCTGGCTTTTCAAGCTCACCAAATAATGGACCAATCAAAACGATTATTTTCTCCCAGTGGACTGGCATGTTGGATTTAGTTGAGGCATCATTGAACGAGTATTGTATACAGTACAGAAGGCTTGATGGTACAATGAGTCTGGCATCAAGAGACAGGGCTGTCAAAGATTTTAACACTGATCCTGAGATCATTGTTATGCTCATGTCACTAAAGGCTGGAAACCTTGGTCTCAACATGGTCGCTGCATGTCATGTTATCCTTTTGGACCTGTGGTGGAATCCAACTACTGAAGATCAAGCTATTGATCGGGCACATAGAATTGGACAGACCCGACCTGTTACTGTAACACGTCTCACAATTAAGGATACAGTGGAGGACAGGATATTAGCTTTACAGGAAGAAAAGAGAAAAATGGTGGCATCTGCTTTTGGTGAAGATCATGGTGGGGGCTCTGCTACACGTCTGACTGTCGAGGATCTGAGGTACCTCTTTATGGTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000228 GO:0000278 GO:0000724 GO:0000725 GO:0000785 GO:0000790 GO:0003674 GO:0003678 GO:0003824 GO:0004003 GO:0004386 GO:0004842 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006281 GO:0006302 GO:0006304 GO:0006305 GO:0006306 GO:0006310 GO:0006464 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007154 GO:0008026 GO:0008094 GO:0008150 GO:0008152 GO:0008270 GO:0009058 GO:0009059 GO:0009292 GO:0009294 GO:0009605 GO:0009892 GO:0009894 GO:0009895 GO:0009987 GO:0009991 GO:0010468 GO:0010605 GO:0010629 GO:0016043 GO:0016070 GO:0016458 GO:0016462 GO:0016567 GO:0016740 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019222 GO:0019538 GO:0019787 GO:0022402 GO:0030162 GO:0031047 GO:0031323 GO:0031324 GO:0031329 GO:0031330 GO:0031668 GO:0031974 GO:0031981 GO:0032259 GO:0032268 GO:0032269 GO:0032392 GO:0032434 GO:0032435 GO:0032446 GO:0032508 GO:0033260 GO:0033554 GO:0034641 GO:0034645 GO:0036211 GO:0042176 GO:0042177 GO:0042262 GO:0042623 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0044728 GO:0044764 GO:0044786 GO:0045003 GO:0045005 GO:0045861 GO:0046483 GO:0046872 GO:0046914 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0051276 GO:0051704 GO:0051716 GO:0060255 GO:0061136 GO:0061630 GO:0061659 GO:0065007 GO:0070013 GO:0070035 GO:0070647 GO:0071103 GO:0071496 GO:0071704 GO:0071840 GO:0080090 GO:0080188 GO:0090304 GO:0140083 GO:0140096 GO:0140097 GO:1901360 GO:1901564 GO:1901576 GO:1901799 GO:1902298 GO:1902969 GO:1903047 GO:1903050 GO:1903051 GO:1903362 GO:1903363 GO:1990505 GO:2000058 GO:2000059
KEGG Pathways
Metabolic & Signaling
ko04918 map04918
Pfam Domains
Protein Families
Helicase_C SNF2_N zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3

Protein Analysis

969

Amino Acids

107.59

Weight (kDa)

7.97

Isoelectric Point (pI)

50.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SNF2-rel_dom PF00176 238 - 642 2.6e-68 SNF2-related domain
zf-C3HC4 PF00097 681 - 717 5.1e-08 Zinc finger, C3HC4 type (RING finger)
zf-C3HC4_2 PF13923 681 - 717 8.5e-07 Zinc finger, C3HC4 type (RING finger)
Helicase_C PF00271 815 - 910 3.4e-19 Helicase conserved C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 336, 1653
AasI GACNNNNNNGTC 1 cut(s) 2564
Acc65I GGTACC 1 cut(s) 2889
AccB1I GGYRCC 3 cut(s) 154, 400, 2889
AccB7I CCANNNNNTGG 1 cut(s) 2432
AccI GTMKAC 1 cut(s) 2512
AciI CCGC 6 cut(s) 302, 380, 635, 1034, 1386, 1842
AclWI GGATC 4 cut(s) 654, 2051, 2579, 2889
AcoI YGGCCR 2 cut(s) 2034, 2089
AcsI RAATTY 7 cut(s) 14, 229, 330, 470, 901, 1636, 2248
AcuI CTGAAG 5 cut(s) 912, 1182, 1546, 2085, 2715
AfiI CCNNNNNNNGG 6 cut(s) 932, 1034, 2066, 2378, 2432, 2899
AflIII ACRYGT 2 cut(s) 2753, 2864
AjiI CACGTC 3 cut(s) 1183, 2756, 2867
AjnI CCWGG 3 cut(s) 106, 1662, 2019
AjuI GAANNNNNNNTTGG 2 cut(s) 2240, 2272
AleI CACNNNNGTG 1 cut(s) 218
Alw21I GWGCWC 2 cut(s) 289, 1399
Alw26I GTCTC 6 cut(s) 435, 613, 2361, 2550, 2639, 2762
Alw44I GTGCAC 1 cut(s) 1395
AlwI GGATC 4 cut(s) 654, 2051, 2579, 2889
Ama87I CYCGRG 1 cut(s) 282
AoxI GGCC 8 cut(s) 308, 430, 502, 796, 1025, 2034, 2068, 2089
ApaLI GTGCAC 1 cut(s) 1395
ApeKI GCWGC 6 cut(s) 391, 1031, 1117, 1143, 1844, 2648
ApoI RAATTY 7 cut(s) 14, 229, 330, 470, 901, 1636, 2248
ArsI GACNNNNNNTTYG 2 cut(s) 2360, 2392
AseI ATTAAT 1 cut(s) 204
Asp718I GGTACC 1 cut(s) 2889
AsuHPI GGTGA 7 cut(s) 232, 602, 1435, 2144, 2273, 2415, 2849
AsuNHI GCTAGC 1 cut(s) 1172
AvaI CYCGRG 1 cut(s) 282
AvaII GGWCC 6 cut(s) 104, 372, 697, 1008, 2435, 2671
BaeGI GKGCMC 2 cut(s) 1399, 2719
BaeI ACNNNNGTAYC 2 cut(s) 1029, 1062
BalI TGGCCA 2 cut(s) 2036, 2091
BanI GGYRCC 3 cut(s) 154, 400, 2889
BanII GRGCYC 1 cut(s) 2858
BarI GAAGNNNNNNTAC 2 cut(s) 660, 692
BbsI GAAGAC 1 cut(s) 680
Bbv12I GWGCWC 2 cut(s) 289, 1399
BbvCI CCTCAGC 1 cut(s) 1920
BbvI GCAGC 6 cut(s) 403, 1043, 1104, 1155, 1831, 2635
BccI CCATC 5 cut(s) 677, 1019, 2013, 2228, 2525
BceAI ACGGC 2 cut(s) 323, 367
BciT130I CCWGG 3 cut(s) 108, 1664, 2021
BciVI GTATCC 1 cut(s) 2764
BclI TGATCA 3 cut(s) 790, 967, 1710
BcoDI GTCTC 6 cut(s) 435, 613, 2361, 2550, 2639, 2762
BfuI GTATCC 1 cut(s) 2764
BisI GCNGC 8 cut(s) 392, 636, 1032, 1118, 1144, 1842, 1845, 2649
BlsI GCNGC 8 cut(s) 393, 637, 1033, 1119, 1145, 1843, 1846, 2650
BmcAI AGTACT 1 cut(s) 409
Bme1390I CCNGG 3 cut(s) 108, 1664, 2021
Bme18I GGWCC 6 cut(s) 104, 372, 697, 1008, 2435, 2671
BmeT110I CYCGRG 1 cut(s) 282
BmgBI CACGTC 3 cut(s) 1183, 2756, 2867
BmiI GGNNCC 8 cut(s) 156, 374, 402, 503, 699, 1623, 2383, 2891
BmrFI CCNGG 3 cut(s) 108, 1664, 2021
BmrI ACTGGG 2 cut(s) 234, 2455
BmsI GCATC 7 cut(s) 726, 1875, 2023, 2143, 2501, 2558, 2834
BmtI GCTAGC 1 cut(s) 1176
BmuI ACTGGG 2 cut(s) 234, 2455
BpiI GAAGAC 1 cut(s) 680
BpmI CTGGAG 1 cut(s) 1646
Bpu10I CCTNAGC 1 cut(s) 1920
BpuEI CTTGAG 2 cut(s) 1449, 1777
BsaBI GATNNNNATC 1 cut(s) 651
BsaI GGTCTC 2 cut(s) 2361, 2639
BsaJI CCNNGG 5 cut(s) 119, 577, 799, 1645, 2629
Bsc4I CCNNNNNNNGG 6 cut(s) 932, 1034, 2066, 2378, 2432, 2899
Bse1I ACTGG 5 cut(s) 240, 1173, 2359, 2461, 2473
Bse8I GATNNNNATC 1 cut(s) 651
BseBI CCWGG 3 cut(s) 108, 1664, 2021
BseDI CCNNGG 5 cut(s) 119, 577, 799, 1645, 2629
BseGI GGATG 3 cut(s) 741, 913, 1096
BseJI GATNNNNATC 1 cut(s) 651
BseLI CCNNNNNNNGG 6 cut(s) 932, 1034, 2066, 2378, 2432, 2899
BseNI ACTGG 5 cut(s) 240, 1173, 2359, 2461, 2473
BseRI GAGGAG 1 cut(s) 1796
BseSI GKGCMC 2 cut(s) 1399, 2719
BseXI GCAGC 6 cut(s) 403, 1043, 1104, 1155, 1831, 2635
BshFI GGCC 8 cut(s) 310, 432, 504, 798, 1027, 2036, 2070, 2091
BshNI GGYRCC 3 cut(s) 154, 400, 2889
BsiHKAI GWGCWC 2 cut(s) 289, 1399
BsiHKCI CYCGRG 1 cut(s) 282
BsiSI CCGG 2 cut(s) 1147, 1900
BslFI GGGAC 3 cut(s) 598, 683, 1205
BslI CCNNNNNNNGG 6 cut(s) 932, 1034, 2066, 2378, 2432, 2899
BsmAI GTCTC 6 cut(s) 435, 613, 2361, 2550, 2639, 2762
BsmBI CGTCTC 1 cut(s) 2762
BsmFI GGGAC 3 cut(s) 598, 683, 1205
BsnI GGCC 8 cut(s) 310, 432, 504, 798, 1027, 2036, 2070, 2091
Bso31I GGTCTC 2 cut(s) 2361, 2639
BsoBI CYCGRG 1 cut(s) 282
Bsp1286I GDGCHC 4 cut(s) 289, 1399, 2719, 2858
Bsp19I CCATGG 1 cut(s) 577
BspACI CCGC 6 cut(s) 302, 380, 635, 1034, 1386, 1842
BspANI GGCC 8 cut(s) 310, 432, 504, 798, 1027, 2036, 2070, 2091
BspLI GGNNCC 8 cut(s) 156, 374, 402, 503, 699, 1623, 2383, 2891
BspOI GCTAGC 1 cut(s) 1176
BspPI GGATC 4 cut(s) 654, 2051, 2579, 2889
BspQI GCTCTTC 1 cut(s) 163
BspT107I GGYRCC 3 cut(s) 154, 400, 2889
BspTNI GGTCTC 2 cut(s) 2361, 2639
BsrI ACTGG 5 cut(s) 240, 1173, 2359, 2461, 2473
BssECI CCNNGG 5 cut(s) 119, 577, 799, 1645, 2629
BssNAI GTATAC 1 cut(s) 2513
BssT1I CCWWGG 5 cut(s) 119, 577, 799, 1645, 2629
Bst1107I GTATAC 1 cut(s) 2513
Bst2UI CCWGG 3 cut(s) 108, 1664, 2021
Bst6I CTCTTC 3 cut(s) 163, 708, 1304
BstC8I GCNNGC 8 cut(s) 95, 506, 607, 1029, 1174, 1788, 1849, 1905
BstDSI CCRYGG 1 cut(s) 577
BstF5I GGATG 3 cut(s) 741, 913, 1096
BstMAI GTCTC 6 cut(s) 435, 613, 2361, 2550, 2639, 2762
BstMWI GCNNNNNNNGC 5 cut(s) 284, 388, 1109, 1841, 2418
BstNI CCWGG 3 cut(s) 108, 1664, 2021
BstNSI RCATGY 4 cut(s) 278, 2148, 2476, 2655
BstSCI CCNGG 3 cut(s) 106, 1662, 2019
BstSLI GKGCMC 2 cut(s) 1399, 2719
BstV1I GCAGC 6 cut(s) 403, 1043, 1104, 1155, 1831, 2635
BstV2I GAAGAC 1 cut(s) 680
BstX2I RGATCY 3 cut(s) 646, 2056, 2881
BstXI CCANNNNNNTGG 1 cut(s) 2468
BstYI RGATCY 3 cut(s) 646, 2056, 2881
BstZ17I GTATAC 1 cut(s) 2513
BsuI GTATCC 1 cut(s) 2764
BsuRI GGCC 8 cut(s) 310, 432, 504, 798, 1027, 2036, 2070, 2091
BtgI CCRYGG 1 cut(s) 577
BtrI CACGTC 3 cut(s) 1183, 2756, 2867
BtsCI GGATG 3 cut(s) 741, 913, 1096
BtsI GCAGTG 3 cut(s) 496, 616, 2368
BtsIMutI CAGTG 9 cut(s) 496, 616, 1079, 1860, 2114, 2368, 2468, 2580, 2781
Cac8I GCNNGC 8 cut(s) 95, 506, 607, 1029, 1174, 1788, 1849, 1905
CseI GACGC 1 cut(s) 1679
DraI TTTAAA 1 cut(s) 900
DrdI GACNNNNNNGTC 1 cut(s) 2564
DseDI GACNNNNNNGTC 1 cut(s) 2564
EaeI YGGCCR 2 cut(s) 2034, 2089
Eam1104I CTCTTC 3 cut(s) 163, 708, 1304
EarI CTCTTC 3 cut(s) 163, 708, 1304
EciI GGCGGA 1 cut(s) 369
Eco130I CCWWGG 5 cut(s) 119, 577, 799, 1645, 2629
Eco24I GRGCYC 1 cut(s) 2858
Eco31I GGTCTC 2 cut(s) 2361, 2639
Eco47I GGWCC 6 cut(s) 104, 372, 697, 1008, 2435, 2671
Eco57I CTGAAG 5 cut(s) 912, 1182, 1546, 2085, 2715
Eco88I CYCGRG 1 cut(s) 282
EcoO109I RGGNCCY 4 cut(s) 372, 430, 796, 2069
EcoRI GAATTC 1 cut(s) 2248
EcoRII CCWGG 3 cut(s) 106, 1662, 2019
EcoT14I CCWWGG 5 cut(s) 119, 577, 799, 1645, 2629
EcoT22I ATGCAT 1 cut(s) 525
EcoT38I GRGCYC 1 cut(s) 2858
ErhI CCWWGG 5 cut(s) 119, 577, 799, 1645, 2629
Esp3I CGTCTC 1 cut(s) 2762
FaqI GGGAC 3 cut(s) 598, 683, 1205
FauI CCCGC 1 cut(s) 1027
FauNDI CATATG 4 cut(s) 175, 1198, 1837, 1936
FbaI TGATCA 3 cut(s) 790, 967, 1710
FblI GTMKAC 1 cut(s) 2512
Fnu4HI GCNGC 8 cut(s) 392, 636, 1032, 1118, 1144, 1842, 1845, 2649
FokI GGATG 3 cut(s) 748, 920, 1103
FriOI GRGCYC 1 cut(s) 2858
Fsp4HI GCNGC 8 cut(s) 392, 636, 1032, 1118, 1144, 1842, 1845, 2649
GluI GCNGC 8 cut(s) 392, 636, 1032, 1118, 1144, 1842, 1845, 2649
GsuI CTGGAG 1 cut(s) 1646
HaeIII GGCC 8 cut(s) 310, 432, 504, 798, 1027, 2036, 2070, 2091
HapII CCGG 2 cut(s) 1147, 1900
HgaI GACGC 1 cut(s) 1679
HindIII AAGCTT 2 cut(s) 894, 1905
HpaII CCGG 2 cut(s) 1147, 1900
HphI GGTGA 7 cut(s) 232, 602, 1435, 2144, 2273, 2415, 2849
Hpy166II GTNNAC 3 cut(s) 1397, 2466, 2513
Hpy188III TCNNGA 9 cut(s) 147, 867, 986, 1160, 1632, 1954, 2231, 2553, 2588
Hpy8I GTNNAC 3 cut(s) 1397, 2466, 2513
Hpy99I CGWCG 1 cut(s) 1695
HpyAV CCTTC 7 cut(s) 168, 386, 1333, 1497, 1499, 2060, 2517
HpyCH4IV ACGT 3 cut(s) 1182, 2755, 2866
HpyF10VI GCNNNNNNNGC 5 cut(s) 284, 388, 1109, 1841, 2418
HpySE526I ACGT 3 cut(s) 1182, 2755, 2866
KpnI GGTACC 1 cut(s) 2893
Ksp22I TGATCA 3 cut(s) 790, 967, 1710
LguI GCTCTTC 1 cut(s) 163
LmnI GCTCC 3 cut(s) 1084, 1665, 1783
Lsp1109I GCAGC 6 cut(s) 403, 1043, 1104, 1155, 1831, 2635
LweI GCATC 7 cut(s) 726, 1875, 2023, 2143, 2501, 2558, 2834
MaeII ACGT 3 cut(s) 1182, 2755, 2866
MfeI CAATTG 2 cut(s) 1539, 2271
MflI RGATCY 3 cut(s) 646, 2056, 2881
MhlI GDGCHC 4 cut(s) 289, 1399, 2719, 2858
MlsI TGGCCA 2 cut(s) 2036, 2091
MluNI TGGCCA 2 cut(s) 2036, 2091
MlyI GAGTC 3 cut(s) 1934, 1977, 2551
MmeI TCCRAC 2 cut(s) 2457, 2711
Mox20I TGGCCA 2 cut(s) 2036, 2091
Mph1103I ATGCAT 1 cut(s) 525
MscI TGGCCA 2 cut(s) 2036, 2091
MslI CAYNNNNRTG 3 cut(s) 218, 815, 2600
Msp20I TGGCCA 2 cut(s) 2036, 2091
MspA1I CMGCKG 2 cut(s) 1034, 1844
MspI CCGG 2 cut(s) 1147, 1900
MspR9I CCNGG 3 cut(s) 108, 1664, 2021
MunI CAATTG 2 cut(s) 1539, 2271
MvaI CCWGG 3 cut(s) 108, 1664, 2021
MwoI GCNNNNNNNGC 5 cut(s) 284, 388, 1109, 1841, 2418
NcoI CCATGG 1 cut(s) 577
NdeI CATATG 4 cut(s) 175, 1198, 1837, 1936
NheI GCTAGC 1 cut(s) 1172
NlaIV GGNNCC 8 cut(s) 156, 374, 402, 503, 699, 1623, 2383, 2891
NmuCI GTSAC 4 cut(s) 590, 1910, 2331, 2610
NsiI ATGCAT 1 cut(s) 525
NspI RCATGY 4 cut(s) 278, 2148, 2476, 2655
OliI CACNNNNGTG 1 cut(s) 218
PaeR7I CTCGAG 1 cut(s) 282
PciSI GCTCTTC 1 cut(s) 163
PfeI GAWTC 9 cut(s) 777, 851, 1156, 1186, 1453, 1814, 1858, 1961, 2683
PflFI GACNNNGTC 1 cut(s) 1949
PflMI CCANNNNNTGG 1 cut(s) 2432
PfoI TCCNGGA 1 cut(s) 2019
PkrI GCNGC 8 cut(s) 393, 637, 1033, 1119, 1145, 1843, 1846, 2650
PleI GAGTC 3 cut(s) 1934, 1977, 2550
PpsI GAGTC 3 cut(s) 1934, 1977, 2550
PpuMI RGGWCCY 1 cut(s) 372
PshBI ATTAAT 1 cut(s) 204
PsiI TTATAA 2 cut(s) 336, 1653
Psp5II RGGWCCY 1 cut(s) 372
Psp6I CCWGG 3 cut(s) 106, 1662, 2019
PspGI CCWGG 3 cut(s) 106, 1662, 2019
PspN4I GGNNCC 8 cut(s) 156, 374, 402, 503, 699, 1623, 2383, 2891
PspPPI RGGWCCY 1 cut(s) 372
PspXI VCTCGAGB 1 cut(s) 282
PsuI RGATCY 3 cut(s) 646, 2056, 2881
PsyI GACNNNGTC 1 cut(s) 1949
RseI CAYNNNNRTG 3 cut(s) 218, 815, 2600
SapI GCTCTTC 1 cut(s) 163
SatI GCNGC 8 cut(s) 392, 636, 1032, 1118, 1144, 1842, 1845, 2649
ScaI AGTACT 1 cut(s) 409
SchI GAGTC 3 cut(s) 1934, 1977, 2551
ScrFI CCNGG 3 cut(s) 108, 1664, 2021
SduI GDGCHC 4 cut(s) 289, 1399, 2719, 2858
SfaNI GCATC 7 cut(s) 726, 1875, 2023, 2143, 2501, 2558, 2834
Sfr274I CTCGAG 1 cut(s) 282
SinI GGWCC 6 cut(s) 104, 372, 697, 1008, 2435, 2671
SlaI CTCGAG 1 cut(s) 282
SmiMI CAYNNNNRTG 3 cut(s) 218, 815, 2600
SmlI CTYRAG 3 cut(s) 282, 1464, 1756
SmoI CTYRAG 3 cut(s) 282, 1464, 1756
SsiI CCGC 6 cut(s) 302, 380, 635, 1034, 1386, 1842
SspI AATATT 3 cut(s) 202, 340, 1876
StyD4I CCNGG 3 cut(s) 106, 1662, 2019
StyI CCWWGG 5 cut(s) 119, 577, 799, 1645, 2629
TaiI ACGT 3 cut(s) 1185, 2758, 2869
TaqI TCGA 6 cut(s) 283, 1069, 1492, 1631, 1693, 2877
TaqII GACCGA 1 cut(s) 685
TatI WGTACW 4 cut(s) 407, 995, 1282, 2517
TauI GCSGC 2 cut(s) 638, 1844
TfiI GAWTC 9 cut(s) 777, 851, 1156, 1186, 1453, 1814, 1858, 1961, 2683
TscAI CASTG 9 cut(s) 496, 616, 1079, 1860, 2114, 2368, 2468, 2587, 2781
TseFI GTSAC 4 cut(s) 590, 1910, 2331, 2610
TseI GCWGC 6 cut(s) 391, 1031, 1117, 1143, 1844, 2648
Tsp45I GTSAC 4 cut(s) 590, 1910, 2331, 2610
TspRI CASTG 9 cut(s) 496, 616, 1079, 1860, 2114, 2368, 2468, 2587, 2781
Tth111I GACNNNGTC 1 cut(s) 1949
Van91I CCANNNNNTGG 1 cut(s) 2432
VneI GTGCAC 1 cut(s) 1395
VpaK11BI GGWCC 6 cut(s) 104, 372, 697, 1008, 2435, 2671
VspI ATTAAT 1 cut(s) 204
XapI RAATTY 7 cut(s) 14, 229, 330, 470, 901, 1636, 2248
XbaI TCTAGA 2 cut(s) 146, 866
XceI RCATGY 4 cut(s) 278, 2148, 2476, 2655
XcmI CCANNNNNNNNNTGG 1 cut(s) 934
XhoI CTCGAG 1 cut(s) 282
XmiI GTMKAC 1 cut(s) 2512
ZrmI AGTACT 1 cut(s) 409
Zsp2I ATGCAT 1 cut(s) 525
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.