RLG00000005606

recombinational repair

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0003214
Physical Location & Seq
Forward (+)
247648 .. 256231
8584 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000005606

Sequence Viewer

Length: 3297 bp
ATGGTATCAGAGGCGTCTGGTGGTGGTGTGCCGGTGCAGGGGAATACAGGTGGGACTTCTGGCACTGCTTGCAATAACGGGGTCAATACTAGTGTGGGGACTTCTACCCCGTGCCCTTCGTTAGTGTTTCGGTTTCCAGTCCCTGGTCTAGCCGGTGAGCCCTCATTGGGAGTCTTGTTTCCGAAGCAGAAACGCTCTTGCATGAGTACGACCCTATTATTTTATTTCCCCTGTACCAGGGTTCCAAAATCAAGTTTGCACCTACACCATAATCTGCTGTTTCCGGAGGAGGAGGGGATGTGTTTAATATCGAAGCATTGCACAGATGTGACTGGCTTACAATCAAGAAACTATCTTTCTAAACTGGTTAAAGAAAGGGAGCATCAACTTTCAACCTTCATGTCTCAAACGGCGTATATAGATCTTAGTTCATCGGACAGTGATTTAGAAGAGATAGAGCCTGTTGGTAGAAGAACTCTTCCACCTTCGTTTTCTGCATCTGCTTCTGGTTCAAATTCAAGGAGTAAAGACTATGCTGACAAGTCTAGAAAGGTGCCTTCTCCTAGAAGAGCACATGCTTCTAATGGAATATCTCCTAATTATAATCACCACAGACAAGTGTTAGATAAGTTTCATCCCAGTTCAAGTGGTGACATAAGAGCCTCAAATCGACAGGTTGCCCGAGCAGATGGTTCTACGTATTTCTCTCAAAATGGAAATGCCCTAAAGAGGACCCTTCCATTATCTATGCAGGCTCTAAACCCTGCAGTAGATAACAGGGCCCACAATCAGTTCCGTGATACCACCAACAAGGGTTTTATGAGAGACCATTCAATCAGGGGGAATGATGAACATATGTATGATAGAATGCCTCCATTTGTAAAGCCATCGTCTAACTCTCAATTTCCTAGTTCAAGTGAGCCTCAATACCTTCCGGGAATAGGTGAAGAAAGGGTTGCTGAAAGTGACGAGAGGCTGATATATCAAGCGGCACTAGAGGAACTTAATCAACCAAAACTTGAAGCTACTTTACCTGATGGTCTTTTGTCGGTCTCTCTTCTACGACATCAGAAAATTGCTTTGGCATGGATGCTTCAGAAGGAAACCAGAAGCTTGCATTGTCTAGGTGGAATCTTAGCTGATGATCAGGGCCTAGGTAAGACAATCTCAATGATTGCACTAATACAAATGCAGAGGTCGTTGCAATCGAAGTCAAAACCTGAACACTTGGACAATAAAACTGAGGCTTTGAATTTGGATGATGATGAGGACCATGGTGGTTGCGGTTTGGATAAAGTCAACAAGACTGAAGAATCTGATCTTAAATCAACTCCAGAAGCTAGTACCTCTGCACAGCCATTCAAAAAGAAGAGGCCAGCAGCTGGTACATTGGTGGTTTGTCCAGCAAGTGTTCTTCGACAGTGGGCTAGGGAGCTGGATGAGAAGGTTGCAGAGGAAGCAAAATTGTCTGTACTTGTTTATCATGGAGGCAGCAGAACAAGGAATCCCGAAGAACTTGCTGGCTATGATGTGGTTCTCACTACATATGCTATTGTAACTAATGAAGTCCCAAAACAACCTTTAGTTGATGAGGATGAGGCGGATGACAAAAATGTGGAAAAGTATGGATTATCTTCTGATTTTTCTGTCAACAAGAAGAGGAAAAAGGCTTCTATTGTTAGTAAGAAGGGAAAGAAAGGTAGGAAAGGATTTGACACTTCCTCTTTTGACTGTGGTTCTGGGCCACTTGCAAGGGTCGGTTGGTTTAGGGTGATACTAGATGAAGCGCAAACCATTAAGAATCACAGAACTCAAGTGGCTAGGGCCTGCTGTAGCCTTCGAGCCAAAAGAAGATGGTGTCTATCTGGTACACCAATACAAAATGCAATTGATGATTTATACAGTTACTTCAGATTTCTGAAATATGATCCTTATGCTGTGTATAAATCATTTTACACTACCATTAAGGTTCCAATATCCAGAAATTCACTCCAAGGTTACAAGAAGCTCCAAGCTGTTCTGAGAGCAATTATGCTGCGCCGGACAAAAGGAACAATGATTGATGGGCAACCTATAATTAATTTACCACCAAAAACAATTAACCTGAGTAAAGTGGAGTTCTCGTCTGAGGAGAGGGCCTTCTATACCAAATTAGAAGCTGATTCACGCTCTCAATTCAAGGCATATGCTGCTGCTGGCACAGTAAATCAAAACTATGCAAATATCCTTTTGATGCTTTTGCGCCTTCGGCAGGCTTGTGATCACCCTCTGCTTGTTAAAGGATATGACACTGACTGCGTTGGGAAAGATTCTGTGGCTATGGCAAGTACACTTTCTAGAGAGATGCTTATCAATCTATTGAATGCCCTGGAAAGTTCCGAGGCCATTTGTCGTGTATGCAATGATGTACTTGAGAACCCTGTTGTTACTATGTGTGGCCATGTTTTCTGCCATCAGTGTGTGTCAGAAAATATGACTGGTGATGACAGTATGTGCCCTGCAATTGAATGCAAAAAACAAGTCGGTCCTGATGTTGTTTTCTCCGAATCCACTCTAATAAGTTGCCTCTCTAAGGATCTTGATGGTGGTTCAATGAATTCTCAGTTGATTGAGAAACCAGTAGTGGTACAGAATGAGTACACTTCATCTAAAGTCAGAGCTGTTATTGAGATAATACAGTCACACTGCAAGTTAAACAGCCCAAATTTGGAGCAATATAATTCTACAGGATGCAATAGAGACTCTCCTTTTGAAAATGAAAACCCAGATTCAGGCATCAATGTTGTAAAGCGCACAACCGTAGTTTCAAACTCGCCAAATGATGGACCAATTAAAGCAATCATTTTCTCCCAATGGACTAAGATGTTGGATTTAGTTGAGAATGCAATGAACGAGTACTGTATACAATACAGAAGGCTTGATGGTACAATGACTCTGACATCAAGAGACAGGGCTGTCAAAGAATTCAACACTGATCCTGAGGTCACTGTTATGCTTATGTCACTAAAGGCAGGAAACCTTGGTCTAAACATGGTTGCTGCATGTCATGTTATTCTTTTGGATCTTTGGTGGAATCCAACAACTGAGGATCAAGCTGTCGATAGGGCACATAGAATTGGACAAACCCGGCCTGTTACTGTAACTCGACTTACTATTAAGGATACAGTAGAGGACAGGATACTAGCTCTACAGGATGAGAAGAGAAAAATGGTTGCATCTGCTTTTGGTGAAGATAATAGTGGGGGCTCTGCAGCTCGTCTGACAGTTGAGGATCTCAGATACCTATTTATGGTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000228 GO:0000278 GO:0000724 GO:0000725 GO:0000785 GO:0000790 GO:0003674 GO:0003678 GO:0003824 GO:0004003 GO:0004386 GO:0004842 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006281 GO:0006302 GO:0006304 GO:0006305 GO:0006306 GO:0006310 GO:0006464 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007154 GO:0008026 GO:0008094 GO:0008150 GO:0008152 GO:0008270 GO:0009058 GO:0009059 GO:0009292 GO:0009294 GO:0009605 GO:0009892 GO:0009894 GO:0009895 GO:0009987 GO:0009991 GO:0010468 GO:0010605 GO:0010629 GO:0016043 GO:0016070 GO:0016458 GO:0016462 GO:0016567 GO:0016740 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019222 GO:0019538 GO:0019787 GO:0022402 GO:0030162 GO:0031047 GO:0031323 GO:0031324 GO:0031329 GO:0031330 GO:0031668 GO:0031974 GO:0031981 GO:0032259 GO:0032268 GO:0032269 GO:0032392 GO:0032434 GO:0032435 GO:0032446 GO:0032508 GO:0033260 GO:0033554 GO:0034641 GO:0034645 GO:0036211 GO:0042176 GO:0042177 GO:0042262 GO:0042623 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0044728 GO:0044764 GO:0044786 GO:0045003 GO:0045005 GO:0045861 GO:0046483 GO:0046872 GO:0046914 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0051276 GO:0051704 GO:0051716 GO:0060255 GO:0061136 GO:0061630 GO:0061659 GO:0065007 GO:0070013 GO:0070035 GO:0070647 GO:0071103 GO:0071496 GO:0071704 GO:0071840 GO:0080090 GO:0080188 GO:0090304 GO:0140083 GO:0140096 GO:0140097 GO:1901360 GO:1901564 GO:1901576 GO:1901799 GO:1902298 GO:1902969 GO:1903047 GO:1903050 GO:1903051 GO:1903362 GO:1903363 GO:1990505 GO:2000058 GO:2000059
KEGG Pathways
Metabolic & Signaling
ko04918 map04918
Pfam Domains
Protein Families
Helicase_C SNF2_N zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3

Protein Analysis

1099

Amino Acids

121.59

Weight (kDa)

8.2

Isoelectric Point (pI)

51.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SNF2-rel_dom PF00176 356 - 756 1.4e-66 SNF2-related domain
zf-C3HC4_2 PF13923 797 - 833 6.4e-09 Zinc finger, C3HC4 type (RING finger)
zf-RING_UBOX PF13445 797 - 833 9e-07 RING-type zinc-finger
zf-C3HC4 PF00097 797 - 833 1.4e-06 Zinc finger, C3HC4 type (RING finger)
zf-C3HC4_4 PF15227 797 - 833 4.9e-06 zinc finger of C3HC4-type, RING
Helicase_C PF00271 945 - 1040 1.6e-19 Helicase conserved C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 603
AasI GACNNNNNNGTC 1 cut(s) 2954
AccB1I GGYRCC 1 cut(s) 553
AccB7I CCANNNNNTGG 3 cut(s) 143, 1382, 2822
AccI GTMKAC 1 cut(s) 2902
AccIII TCCGGA 1 cut(s) 283
AciI CCGC 3 cut(s) 989, 1284, 1601
AclWI GGATC 6 cut(s) 1922, 2583, 2969, 3069, 3096, 3279
AcoI YGGCCR 1 cut(s) 2437
AcsI RAATTY 6 cut(s) 514, 1252, 1984, 2596, 2704, 2963
AcuI CTGAAG 3 cut(s) 1079, 1329, 1894
AcyI GRCGYC 1 cut(s) 14
AhlI ACTAGT 1 cut(s) 89
AjnI CCWGG 3 cut(s) 142, 236, 2367
AjuI GAANNNNNNNTTGG 2 cut(s) 1064, 1096
AleI CACNNNNGTG 1 cut(s) 326
AloI GAACNNNNNNTCC 2 cut(s) 1489, 1521
Alw21I GWGCWC 1 cut(s) 574
Alw26I GTCTC 5 cut(s) 408, 819, 1057, 2733, 2940
AlwI GGATC 6 cut(s) 1922, 2583, 2969, 3069, 3096, 3279
AlwNI CAGNNNCTG 2 cut(s) 143, 1382
Ama87I CYCGRG 1 cut(s) 681
Aor13HI TCCGGA 1 cut(s) 283
AoxI GGCC 9 cut(s) 780, 1150, 1373, 1742, 1824, 2136, 2382, 2437, 3128
ApaI GGGCCC 1 cut(s) 784
ApeKI GCWGC 7 cut(s) 1379, 1491, 2035, 2189, 2192, 3038, 3251
ApoI RAATTY 6 cut(s) 514, 1252, 1984, 2596, 2704, 2963
ArsI GACNNNNNNTTYG 4 cut(s) 2505, 2537, 2732, 2764
AseI ATTAAT 1 cut(s) 2079
AspA2I CCTAGG 1 cut(s) 1153
AspLEI GCGC 4 cut(s) 1789, 2040, 2244, 2793
AsuC2I CCSGG 2 cut(s) 936, 3127
AsuHPI GGTGA 8 cut(s) 167, 599, 662, 956, 1783, 2255, 2492, 3239
AvaI CYCGRG 1 cut(s) 681
AvaII GGWCC 4 cut(s) 732, 1270, 2525, 2825
AvrII CCTAGG 1 cut(s) 1153
AxyI CCTNAGG 1 cut(s) 2979
BaeGI GKGCMC 4 cut(s) 116, 784, 2498, 3109
BaeI ACNNNNGTAYC 2 cut(s) 1377, 1410
BalI TGGCCA 1 cut(s) 2439
BanI GGYRCC 1 cut(s) 553
BanII GRGCYC 3 cut(s) 162, 784, 3248
BarI GAAGNNNNNNTAC 2 cut(s) 1014, 1046
Bbv12I GWGCWC 1 cut(s) 574
BbvI GCAGC 7 cut(s) 1391, 1503, 2022, 2176, 2179, 3025, 3263
BccI CCATC 9 cut(s) 683, 895, 1031, 1848, 2057, 2460, 2576, 2816, 2915
BceAI ACGGC 1 cut(s) 426
BcgI CGANNNNNNTGC 2 cut(s) 1499, 1533
BciT130I CCWGG 3 cut(s) 144, 238, 2369
BciVI GTATCC 2 cut(s) 3154, 3171
BclI TGATCA 2 cut(s) 1144, 2260
BcnI CCSGG 2 cut(s) 936, 3127
BcoDI GTCTC 5 cut(s) 408, 819, 1057, 2733, 2940
BcuI ACTAGT 1 cut(s) 89
BfmI CTRYAG 5 cut(s) 765, 1831, 2724, 3188, 3249
BfuI GTATCC 2 cut(s) 3154, 3171
BglII AGATCT 1 cut(s) 421
BisI GCNGC 8 cut(s) 990, 1380, 1492, 2036, 2190, 2193, 3039, 3252
BlnI CCTAGG 1 cut(s) 1153
BlsI GCNGC 8 cut(s) 991, 1381, 1493, 2037, 2191, 2194, 3040, 3253
BmcAI AGTACT 1 cut(s) 2897
Bme1390I CCNGG 5 cut(s) 144, 238, 936, 2369, 3127
Bme18I GGWCC 4 cut(s) 732, 1270, 2525, 2825
BmeT110I CYCGRG 1 cut(s) 681
BmiI GGNNCC 5 cut(s) 243, 555, 734, 782, 1971
BmrFI CCNGG 5 cut(s) 144, 238, 936, 2369, 3127
BmrI ACTGGG 1 cut(s) 633
BmsI GCATC 8 cut(s) 391, 506, 1080, 2223, 2334, 2720, 2784, 3224
BmuI ACTGGG 1 cut(s) 633
BpmI CTGGAG 1 cut(s) 1317
BpuEI CTTGAG 2 cut(s) 1797, 2432
BpuMI CCSGG 2 cut(s) 936, 3127
BsaAI YACGTR 1 cut(s) 699
BsaBI GATNNNNATC 1 cut(s) 2348
BsaHI GRCGYC 1 cut(s) 14
BsaI GGTCTC 2 cut(s) 819, 1057
BsaJI CCNNGG 8 cut(s) 142, 237, 1153, 1273, 1993, 2367, 2379, 3019
BsaWI WCCGGW 1 cut(s) 283
BsaXI ACNNNNNCTCC 4 cut(s) 284, 314, 2108, 2138
Bse118I RCCGGY 2 cut(s) 31, 152
Bse1I ACTGG 6 cut(s) 137, 337, 369, 639, 2482, 2618
Bse21I CCTNAGG 1 cut(s) 2979
Bse3DI GCAATG 3 cut(s) 316, 2407, 2892
Bse8I GATNNNNATC 1 cut(s) 2348
BseAI TCCGGA 1 cut(s) 283
BseBI CCWGG 3 cut(s) 144, 238, 2369
BseDI CCNNGG 8 cut(s) 142, 237, 1153, 1273, 1993, 2367, 2379, 3019
BseGI GGATG 9 cut(s) 303, 634, 1095, 1264, 1444, 1600, 1609, 2735, 3199
BseJI GATNNNNATC 1 cut(s) 2348
BseMI GCAATG 3 cut(s) 316, 2407, 2892
BseMII CTCAG 8 cut(s) 1233, 2012, 2096, 2118, 2615, 2970, 3075, 3289
BseNI ACTGG 6 cut(s) 137, 337, 369, 639, 2482, 2618
BseRI GAGGAG 3 cut(s) 302, 305, 2144
BseSI GKGCMC 4 cut(s) 116, 784, 2498, 3109
BseXI GCAGC 7 cut(s) 1391, 1503, 2022, 2176, 2179, 3025, 3263
BsgI GTGCAG 2 cut(s) 56, 1335
BshFI GGCC 9 cut(s) 782, 1152, 1375, 1744, 1826, 2138, 2384, 2439, 3130
BshNI GGYRCC 1 cut(s) 553
BsiHKAI GWGCWC 1 cut(s) 574
BsiHKCI CYCGRG 1 cut(s) 681
BsiSI CCGG 6 cut(s) 32, 153, 284, 935, 2041, 3127
BslFI GGGAC 4 cut(s) 67, 112, 125, 1553
BsmAI GTCTC 5 cut(s) 408, 819, 1057, 2733, 2940
BsmFI GGGAC 4 cut(s) 67, 112, 125, 1553
BsmI GAATGC 4 cut(s) 873, 2368, 2513, 2887
BsnI GGCC 9 cut(s) 782, 1152, 1375, 1744, 1826, 2138, 2384, 2439, 3130
Bso31I GGTCTC 2 cut(s) 819, 1057
BsoBI CYCGRG 1 cut(s) 681
Bsp120I GGGCCC 1 cut(s) 780
Bsp1286I GDGCHC 7 cut(s) 116, 162, 574, 784, 2498, 3109, 3248
Bsp13I TCCGGA 1 cut(s) 283
Bsp19I CCATGG 1 cut(s) 1273
BspACI CCGC 3 cut(s) 989, 1284, 1601
BspANI GGCC 9 cut(s) 782, 1152, 1375, 1744, 1826, 2138, 2384, 2439, 3130
BspCNI CTCAG 8 cut(s) 1234, 2013, 2097, 2119, 2614, 2971, 3076, 3288
BspEI TCCGGA 1 cut(s) 283
BspLI GGNNCC 5 cut(s) 243, 555, 734, 782, 1971
BspMAI CTGCAG 2 cut(s) 769, 3253
BspPI GGATC 6 cut(s) 1922, 2583, 2969, 3069, 3096, 3279
BspQI GCTCTTC 1 cut(s) 562
BspT107I GGYRCC 1 cut(s) 553
BspTNI GGTCTC 2 cut(s) 819, 1057
BsrDI GCAATG 3 cut(s) 316, 2407, 2892
BsrFI RCCGGY 2 cut(s) 31, 152
BsrI ACTGG 6 cut(s) 137, 337, 369, 639, 2482, 2618
BssAI RCCGGY 2 cut(s) 31, 152
BssECI CCNNGG 8 cut(s) 142, 237, 1153, 1273, 1993, 2367, 2379, 3019
BssNAI GTATAC 1 cut(s) 2903
BssNI GRCGYC 1 cut(s) 14
BssT1I CCWWGG 4 cut(s) 1153, 1273, 1993, 3019
Bst1107I GTATAC 1 cut(s) 2903
Bst2UI CCWGG 3 cut(s) 144, 238, 2369
Bst6I CTCTTC 7 cut(s) 444, 483, 562, 1062, 1364, 1652, 3194
BstACI GRCGYC 1 cut(s) 14
BstAPI GCANNNNNTGC 2 cut(s) 69, 2189
BstBAI YACGTR 1 cut(s) 699
BstC8I GCNNGC 8 cut(s) 70, 753, 1115, 1377, 1522, 1828, 2197, 2253
BstDSI CCRYGG 1 cut(s) 1273
BstENI CCTNNNNNAGG 3 cut(s) 235, 2249, 2570
BstF5I GGATG 9 cut(s) 303, 634, 1095, 1264, 1444, 1600, 1609, 2735, 3199
BstHHI GCGC 4 cut(s) 1789, 2040, 2244, 2793
BstMAI GTCTC 5 cut(s) 408, 819, 1057, 2733, 2940
BstMWI GCNNNNNNNGC 4 cut(s) 69, 1457, 2189, 2248
BstNI CCWGG 3 cut(s) 144, 238, 2369
BstNSI RCATGY 2 cut(s) 578, 3045
BstSCI CCNGG 5 cut(s) 142, 236, 934, 2367, 3125
BstSFI CTRYAG 5 cut(s) 765, 1831, 2724, 3188, 3249
BstSLI GKGCMC 4 cut(s) 116, 784, 2498, 3109
BstSNI TACGTA 1 cut(s) 699
BstV1I GCAGC 7 cut(s) 1391, 1503, 2022, 2176, 2179, 3025, 3263
BstX2I RGATCY 4 cut(s) 421, 2575, 3061, 3271
BstYI RGATCY 4 cut(s) 421, 2575, 3061, 3271
BstZ17I GTATAC 1 cut(s) 2903
Bsu36I CCTNAGG 1 cut(s) 2979
BsuI GTATCC 2 cut(s) 3154, 3171
BsuRI GGCC 9 cut(s) 782, 1152, 1375, 1744, 1826, 2138, 2384, 2439, 3130
BtgI CCRYGG 1 cut(s) 1273
BtsCI GGATG 9 cut(s) 303, 634, 1095, 1264, 1444, 1600, 1609, 2735, 3199
BtsI GCAGTG 2 cut(s) 63, 2683
BtsIMutI CAGTG 8 cut(s) 63, 445, 1427, 2289, 2462, 2683, 2970, 2985
Cac8I GCNNGC 8 cut(s) 70, 753, 1115, 1377, 1522, 1828, 2197, 2253
CaiI CAGNNNCTG 2 cut(s) 143, 1382
CfoI GCGC 4 cut(s) 1789, 2040, 2244, 2793
Cfr10I RCCGGY 2 cut(s) 31, 152
CseI GACGC 1 cut(s) 3
DrdI GACNNNNNNGTC 1 cut(s) 2954
DseDI GACNNNNNNGTC 1 cut(s) 2954
EaeI YGGCCR 1 cut(s) 2437
Eam1104I CTCTTC 7 cut(s) 444, 483, 562, 1062, 1364, 1652, 3194
EarI CTCTTC 7 cut(s) 444, 483, 562, 1062, 1364, 1652, 3194
EciI GGCGGA 1 cut(s) 1616
Eco105I TACGTA 1 cut(s) 699
Eco130I CCWWGG 4 cut(s) 1153, 1273, 1993, 3019
Eco24I GRGCYC 3 cut(s) 162, 784, 3248
Eco31I GGTCTC 2 cut(s) 819, 1057
Eco47I GGWCC 4 cut(s) 732, 1270, 2525, 2825
Eco57I CTGAAG 3 cut(s) 1079, 1329, 1894
Eco81I CCTNAGG 1 cut(s) 2979
Eco88I CYCGRG 1 cut(s) 681
EcoNI CCTNNNNNAGG 3 cut(s) 235, 2249, 2570
EcoO109I RGGNCCY 5 cut(s) 732, 780, 1150, 1824, 2136
EcoRI GAATTC 2 cut(s) 2596, 2963
EcoRII CCWGG 3 cut(s) 142, 236, 2367
EcoT14I CCWWGG 4 cut(s) 1153, 1273, 1993, 3019
EcoT38I GRGCYC 3 cut(s) 162, 784, 3248
ErhI CCWWGG 4 cut(s) 1153, 1273, 1993, 3019
FaqI GGGAC 4 cut(s) 67, 112, 125, 1553
FauNDI CATATG 3 cut(s) 855, 1546, 2185
FbaI TGATCA 2 cut(s) 1144, 2260
FblI GTMKAC 1 cut(s) 2902
Fnu4HI GCNGC 8 cut(s) 990, 1380, 1492, 2036, 2190, 2193, 3039, 3252
FokI GGATG 9 cut(s) 310, 621, 1102, 1271, 1451, 1607, 1616, 2742, 3206
FriOI GRGCYC 3 cut(s) 162, 784, 3248
Fsp4HI GCNGC 8 cut(s) 990, 1380, 1492, 2036, 2190, 2193, 3039, 3252
GlaI GCGC 4 cut(s) 1788, 2039, 2243, 2792
GluI GCNGC 8 cut(s) 990, 1380, 1492, 2036, 2190, 2193, 3039, 3252
GsuI CTGGAG 1 cut(s) 1317
HaeIII GGCC 9 cut(s) 782, 1152, 1375, 1744, 1826, 2138, 2384, 2439, 3130
HapII CCGG 6 cut(s) 32, 153, 284, 935, 2041, 3127
HgaI GACGC 1 cut(s) 3
HhaI GCGC 4 cut(s) 1789, 2040, 2244, 2793
Hin1I GRCGYC 1 cut(s) 14
Hin6I GCGC 4 cut(s) 1787, 2038, 2242, 2791
HinP1I GCGC 4 cut(s) 1787, 2038, 2242, 2791
HincII GTYRAC 2 cut(s) 1300, 1651
HindII GTYRAC 2 cut(s) 1300, 1651
HindIII AAGCTT 1 cut(s) 1111
HpaII CCGG 6 cut(s) 32, 153, 284, 935, 2041, 3127
HphI GGTGA 8 cut(s) 167, 599, 662, 956, 1783, 2255, 2492, 3239
Hpy166II GTNNAC 6 cut(s) 1300, 1651, 1871, 2330, 2640, 2903
Hpy8I GTNNAC 6 cut(s) 1300, 1651, 1871, 2330, 2640, 2903
HpyCH4IV ACGT 1 cut(s) 698
HpyF10VI GCNNNNNNNGC 4 cut(s) 69, 1457, 2189, 2248
HpySE526I ACGT 1 cut(s) 698
Hsp92I GRCGYC 1 cut(s) 14
HspAI GCGC 4 cut(s) 1787, 2038, 2242, 2791
Kpn2I TCCGGA 1 cut(s) 283
Ksp22I TGATCA 2 cut(s) 1144, 2260
LguI GCTCTTC 1 cut(s) 562
LmnI GCTCC 4 cut(s) 379, 1432, 2013, 2710
Lsp1109I GCAGC 7 cut(s) 1391, 1503, 2022, 2176, 2179, 3025, 3263
LweI GCATC 8 cut(s) 391, 506, 1080, 2223, 2334, 2720, 2784, 3224
MaeII ACGT 1 cut(s) 698
MfeI CAATTG 2 cut(s) 1887, 2502
MflI RGATCY 4 cut(s) 421, 2575, 3061, 3271
MhlI GDGCHC 7 cut(s) 116, 162, 574, 784, 2498, 3109, 3248
MlsI TGGCCA 1 cut(s) 2439
MluNI TGGCCA 1 cut(s) 2439
MlyI GAGTC 3 cut(s) 180, 2735, 2926
MmeI TCCRAC 2 cut(s) 2847, 3101
Mox20I TGGCCA 1 cut(s) 2439
MroI TCCGGA 1 cut(s) 283
MscI TGGCCA 1 cut(s) 2439
MslI CAYNNNNRTG 4 cut(s) 326, 858, 2457, 2990
Msp20I TGGCCA 1 cut(s) 2439
MspA1I CMGCKG 1 cut(s) 1382
MspI CCGG 6 cut(s) 32, 153, 284, 935, 2041, 3127
MspR9I CCNGG 5 cut(s) 144, 238, 936, 2369, 3127
MunI CAATTG 2 cut(s) 1887, 2502
Mva1269I GAATGC 4 cut(s) 873, 2368, 2513, 2887
MvaI CCWGG 3 cut(s) 144, 238, 2369
MwoI GCNNNNNNNGC 4 cut(s) 69, 1457, 2189, 2248
NciI CCSGG 2 cut(s) 936, 3127
NcoI CCATGG 1 cut(s) 1273
NdeI CATATG 3 cut(s) 855, 1546, 2185
NlaIV GGNNCC 5 cut(s) 243, 555, 734, 782, 1971
NmuCI GTSAC 6 cut(s) 328, 650, 965, 2679, 2983, 3000
NspI RCATGY 2 cut(s) 578, 3045
OliI CACNNNNGTG 1 cut(s) 326
PciSI GCTCTTC 1 cut(s) 562
PcsI WCGNNNNNNNCGW 1 cut(s) 1205
PctI GAATGC 4 cut(s) 873, 2368, 2513, 2887
PfeI GAWTC 9 cut(s) 1131, 1313, 1504, 1801, 2162, 2309, 2546, 2768, 3073
PflMI CCANNNNNTGG 3 cut(s) 143, 1382, 2822
PfoI TCCNGGA 1 cut(s) 934
PkrI GCNGC 8 cut(s) 991, 1381, 1493, 2037, 2191, 2194, 3040, 3253
PleI GAGTC 3 cut(s) 179, 2735, 2926
PpsI GAGTC 3 cut(s) 179, 2735, 2926
Ppu21I YACGTR 1 cut(s) 699
PpuMI RGGWCCY 1 cut(s) 732
PshBI ATTAAT 1 cut(s) 2079
PsiI TTATAA 1 cut(s) 603
Psp5II RGGWCCY 1 cut(s) 732
Psp6I CCWGG 3 cut(s) 142, 236, 2367
PspGI CCWGG 3 cut(s) 142, 236, 2367
PspN4I GGNNCC 5 cut(s) 243, 555, 734, 782, 1971
PspOMI GGGCCC 1 cut(s) 780
PspPPI RGGWCCY 1 cut(s) 732
PstI CTGCAG 2 cut(s) 769, 3253
PstNI CAGNNNCTG 2 cut(s) 143, 1382
PsuI RGATCY 4 cut(s) 421, 2575, 3061, 3271
PvuII CAGCTG 1 cut(s) 1382
RseI CAYNNNNRTG 4 cut(s) 326, 858, 2457, 2990
SapI GCTCTTC 1 cut(s) 562
SatI GCNGC 8 cut(s) 990, 1380, 1492, 2036, 2190, 2193, 3039, 3252
ScaI AGTACT 1 cut(s) 2897
SchI GAGTC 3 cut(s) 180, 2735, 2926
ScrFI CCNGG 5 cut(s) 144, 238, 936, 2369, 3127
SduI GDGCHC 7 cut(s) 116, 162, 574, 784, 2498, 3109, 3248
SfaNI GCATC 8 cut(s) 391, 506, 1080, 2223, 2334, 2720, 2784, 3224
SfcI CTRYAG 5 cut(s) 765, 1831, 2724, 3188, 3249
SinI GGWCC 4 cut(s) 732, 1270, 2525, 2825
SmiMI CAYNNNNRTG 4 cut(s) 326, 858, 2457, 2990
SmlI CTYRAG 2 cut(s) 1812, 2411
SmoI CTYRAG 2 cut(s) 1812, 2411
SnaBI TACGTA 1 cut(s) 699
SpeI ACTAGT 1 cut(s) 89
SsiI CCGC 3 cut(s) 989, 1284, 1601
StyD4I CCNGG 5 cut(s) 142, 236, 934, 2367, 3125
StyI CCWWGG 4 cut(s) 1153, 1273, 1993, 3019
TaiI ACGT 1 cut(s) 701
TaqI TCGA 7 cut(s) 311, 670, 1208, 1417, 1840, 3099, 3145
TaqII GACCGA 2 cut(s) 1039, 2513
TatI WGTACW 5 cut(s) 1471, 2327, 2407, 2637, 2895
TauI GCSGC 1 cut(s) 992
TfiI GAWTC 9 cut(s) 1131, 1313, 1504, 1801, 2162, 2309, 2546, 2768, 3073
TscAI CASTG 8 cut(s) 70, 445, 1427, 2296, 2462, 2690, 2977, 2992
TseFI GTSAC 6 cut(s) 328, 650, 965, 2679, 2983, 3000
TseI GCWGC 7 cut(s) 1379, 1491, 2035, 2189, 2192, 3038, 3251
Tsp45I GTSAC 6 cut(s) 328, 650, 965, 2679, 2983, 3000
TspGWI ACGGA 1 cut(s) 785
TspRI CASTG 8 cut(s) 70, 445, 1427, 2296, 2462, 2690, 2977, 2992
Van91I CCANNNNNTGG 3 cut(s) 143, 1382, 2822
VpaK11BI GGWCC 4 cut(s) 732, 1270, 2525, 2825
VspI ATTAAT 1 cut(s) 2079
XagI CCTNNNNNAGG 3 cut(s) 235, 2249, 2570
XapI RAATTY 6 cut(s) 514, 1252, 1984, 2596, 2704, 2963
XbaI TCTAGA 2 cut(s) 545, 2336
XceI RCATGY 2 cut(s) 578, 3045
XmaJI CCTAGG 1 cut(s) 1153
XmiI GTMKAC 1 cut(s) 2902
ZrmI AGTACT 1 cut(s) 2897
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.