Rh4CG465300

recombinational repair

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
OG0003214
Physical Location & Seq
Reverse (-)
69503242 .. 69509556
6315 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG465300.1

Sequence Viewer

Length: 3063 bp
ATGTTTGGTGATGTGGATCACCTTCATGATTTGTTTCAGTCCACTTGGAGATGCTGCTCTTTCTTACGTGGATGGATTGGCAGTTTAATATCGAAGCATTGCACAGATGTGACTGGCTTACAATCAAGAAACTATCTCTCTAAACTGGTTAAAGAAAGGGAGCATCAACTTTCAACCTTCATGTCTCAAACGGCGTATATAGATCTTAGTTCATCTGACAGTGATTTAGAAGAGATAGAGCCTGTTGGTAGAAGAACTCTTCCACCTTCGTTTTCTGCATCTGCTTCTGCTTCTGGTTCAAATTCAAGGAGTAAAGACTATGCTGACAAGTCTAGAAAGGTGCCTTCTAATGGAATATCACCTAATTATAATCACCACAGACAAGTGTTAGATAAGTTTCATCCCAGTTCAAGTGGTGACATAAGAGCATCAAATCAACAGGTTGCCCGAGCAGATAGTTCTACGTATTTCTCTCAAAATGGAAATGCCCTAAAGAGGACCCTTCCATTATCTATGCAGGCTCTAAACCCTGCAGTAGATAACAGGGCCCACAATCAGTTCCGTGATACCACCAACAAGGGTTTTATGAGAGACCATTCAATCAGGGGGAATGATGAACATATGTATGATAGAATGCCTCCATTTGTAAAGTCATCGTCTAACTCCCAATTTCCTAGTTCAAGTGAGCCTCAATACCTTCCGGGAATAGGTGAAGAAAGGGTTGCTGAAAGTGACGAGAGGCTGATATATCAAGCGGCACTAGAGGAACTTAATCAACCAAAACTTGAAGCTACTTTACCTGATGGTCTTTTGTCGGTCTCTCTTCTACGACATCAGAAAATTGCTTTGGCATGGATGCTTCAGAAGGAAACCAGAAGCTTGCATTGTCTAGGTGGAATCTTAGCTGATGATCAGGGCCTTGGTAAGACAATCTCAATGATTGCACTTATACAAATGCAGAGGTCTTTGCAATCGAAGTCAAAACCTGAACACTTGGACAATAAAACTGAAGCTTTGAATTTGGATGATGATGAGGACCATGGTGGTTGCGGTTTGGATAAAGTCAACAAGACTGAAGAATCTGATCTTAAATCAACTCCAGAAGCTAGTACCTCTGCACAGCCATTCAAAAAGAAGAGGCCAGCAGCTGGTACATTGGTGGTTTGTCCAGCAAGTGTTCTTCGACAGTGGGCTAGGGAGCTGGATGAGAAGGTTGCAGAGGAAGCAAAATTGTCTGTACTTGTTTATCATGGAGGCAGCAGAACAAGGAATCCCGAAGAACTTGCTGGCTATGATGTGGTTCTCACTACATATGCTATTGTAACTAATGAAGTCCCAAAACAACCTTTAGTTGATGAGGATGAGGGGGATGAAAAAAATGTGGAAAAGTATGGATTATCTTCTGATTTTTCTGTCAACAAGAAGAGGAAAAAGGCTTCTAATGTTAGTAAGAAGGGAAAGAAAGGTAGGAAAGGATTTGACACTTCCCCTTTTGACTGTGGTTCTGGGCCACTTGCAAGGGTCGGTTGGTTTAGGGTGATACTAGATGAAGCGCAAACCATTAAGAATCACAGAACTCAAGTGGCTAGGGCCTGCTGTAGCCTTCGAGCCAAAAGAAGATGGTGTCTATCTGGTACACCAATACAAAATGCAATTGATGATTTATACAGTTACTTCAGATTTCTGAAATATGATCCTTATGCTGTGTATAAATCATTTTACACTACCATTAAGGTTCCAATATCCAGAAATTCACTCCAAGGTTACAAGAAGCTCCAAGCTGTTCTGAGAGCTATTATGCTGCGCCGGACAAAAGGAACAATGATTGATGGGCAACCTATAATTAATTTACCACCAAAAACAATTAACCTGAGTAAAGTGGAGTTCTCGTCTGAGGAGAGGGCCTTCTATACCAAATTAGAAGCTGATTCACGCTCTCAATTCAAGGCATATGCTGCTGCTGGCACAGTAAATCAAAACTATGCAAATATTCTTTTGATGCTTTTGCGCCTTCGGCAGGCTTGTGATCACCCTCTACTTGTTAAAGGATATGACACTGACTGCGTTGGGAAAGATTCTGTGGCTATGGCAAGTACACTTTCTAGAGAGATGCTTATCAATCTATTGAATGCCCTGGAAAGTTCCGAGGCCATTTGTCGTGTATGCAATGATGTACTTGAGAACCCTGTTGTTACTATGTGTGGCCATGTTTTCTGCCATCAGTGTGTGTCAGAAAATATGACTGGTGATGACAGTATGTGCCCTGCAATTGAATGCAAAAAACAAGTCGGTCCTGATGTTGTTTTCTCCGAATCCACTCTAATAAGTTGCCTCTCTAAGGATCTTGATGGTGGTTCAACGAATTCTCAGTTGATTGAGAAACCAGTAGTGGTACAGAATGAGTACACTTCATCTAAAGTCAGAGCTGTTATTGAGATAATACAGTCACACTGCAGGTTAAACAGCCCAAATTTGGAGCAATATAATTCTACAGGATGCAATAGAGACTCTTCTTTTGAAAATGAAAACCCGTATTCAGACATCAATGTTGTAAAGCGCACAACCGTAGTTTCAAACTCGCCAAATGATGGACCAATTAAAGCAATCATTTTCTCCCAATGGACTAAGATGTTGGATTTAGTTGAGAATGCAATGAACGAGTACTGTATACAATACAGAAGGCTTGATGGTACAATGACTCTGACATCAAGAGACAGGGCTGTCAAAGAATTCAACACTGATCCTGAGGTCACTGTTATGCTTATGTCACTAAAGGCAGGAAACCTTGGTCTAAACATGGTTGCTGCATGTCATGTTATCCTTTTGGATCTTTGGTGGAATCCAACAACTGAGGATCAAGCTGTCGATAGGGCACATAGAATTGGACAAACCCGGCCTGTTACTGTAACTCGACTTACTATTAAGGATACAGTAGAGGACAGGATATTAGCTCTACAGGATGAGAAGAGAAAAATGGTTGCATCTGCTTTTGGTGAAGATAATAGTGGGGGCTCTGCAGCTCGTCTGACAGTTGAGGATCTCAGATACCTATTTATGGTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000228 GO:0000278 GO:0000724 GO:0000725 GO:0000785 GO:0000790 GO:0003674 GO:0003678 GO:0003824 GO:0004003 GO:0004386 GO:0004842 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006281 GO:0006302 GO:0006304 GO:0006305 GO:0006306 GO:0006310 GO:0006464 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007154 GO:0008026 GO:0008094 GO:0008150 GO:0008152 GO:0008270 GO:0009058 GO:0009059 GO:0009292 GO:0009294 GO:0009605 GO:0009892 GO:0009894 GO:0009895 GO:0009987 GO:0009991 GO:0010468 GO:0010605 GO:0010629 GO:0016043 GO:0016070 GO:0016458 GO:0016462 GO:0016567 GO:0016740 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019222 GO:0019538 GO:0019787 GO:0022402 GO:0030162 GO:0031047 GO:0031323 GO:0031324 GO:0031329 GO:0031330 GO:0031668 GO:0031974 GO:0031981 GO:0032259 GO:0032268 GO:0032269 GO:0032392 GO:0032434 GO:0032435 GO:0032446 GO:0032508 GO:0033260 GO:0033554 GO:0034641 GO:0034645 GO:0036211 GO:0042176 GO:0042177 GO:0042262 GO:0042623 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0044728 GO:0044764 GO:0044786 GO:0045003 GO:0045005 GO:0045861 GO:0046483 GO:0046872 GO:0046914 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0051276 GO:0051704 GO:0051716 GO:0060255 GO:0061136 GO:0061630 GO:0061659 GO:0065007 GO:0070013 GO:0070035 GO:0070647 GO:0071103 GO:0071496 GO:0071704 GO:0071840 GO:0080090 GO:0080188 GO:0090304 GO:0140083 GO:0140096 GO:0140097 GO:1901360 GO:1901564 GO:1901576 GO:1901799 GO:1902298 GO:1902969 GO:1903047 GO:1903050 GO:1903051 GO:1903362 GO:1903363 GO:1990505 GO:2000058 GO:2000059
KEGG Pathways
Metabolic & Signaling
ko04918 map04918
Pfam Domains
Protein Families
Helicase_C SNF2_N zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3

Protein Analysis

1020

Amino Acids

113.85

Weight (kDa)

7.48

Isoelectric Point (pI)

48.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SNF2-rel_dom PF00176 278 - 678 1.3e-66 SNF2-related domain
zf-C3HC4_2 PF13923 719 - 755 5.9e-09 Zinc finger, C3HC4 type (RING finger)
zf-RING_UBOX PF13445 719 - 755 8.3e-07 RING-type zinc-finger
zf-C3HC4 PF00097 719 - 755 1.3e-06 Zinc finger, C3HC4 type (RING finger)
zf-C3HC4_4 PF15227 719 - 755 4.5e-06 zinc finger of C3HC4-type, RING
Helicase_C PF00271 867 - 962 1.5e-19 Helicase conserved C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 369
AasI GACNNNNNNGTC 1 cut(s) 2720
Acc36I ACCTGC 1 cut(s) 2445
AccB1I GGYRCC 1 cut(s) 340
AccB7I CCANNNNNTGG 2 cut(s) 1148, 2588
AccI GTMKAC 1 cut(s) 2668
AciI CCGC 2 cut(s) 755, 1050
AclWI GGATC 7 cut(s) 24, 1688, 2349, 2735, 2835, 2862, 3045
AcoI YGGCCR 1 cut(s) 2203
AcsI RAATTY 6 cut(s) 301, 1018, 1750, 2362, 2470, 2729
AcuI CTGAAG 4 cut(s) 845, 1029, 1095, 1660
AfiI CCNNNNNNNGG 9 cut(s) 350, 495, 707, 1148, 2017, 2338, 2473, 2588, 3055
AjnI CCWGG 1 cut(s) 2133
AjuI GAANNNNNNNTTGG 2 cut(s) 830, 862
AleI CACNNNNGTG 1 cut(s) 107
AloI GAACNNNNNNTCC 2 cut(s) 1255, 1287
Alw26I GTCTC 5 cut(s) 189, 585, 823, 2499, 2706
AlwI GGATC 7 cut(s) 24, 1688, 2349, 2735, 2835, 2862, 3045
AlwNI CAGNNNCTG 1 cut(s) 1148
Ama87I CYCGRG 1 cut(s) 447
AoxI GGCC 9 cut(s) 546, 916, 1139, 1508, 1590, 1902, 2148, 2203, 2894
ApaI GGGCCC 1 cut(s) 550
ApeKI GCWGC 8 cut(s) 54, 1145, 1257, 1801, 1955, 1958, 2804, 3017
ApoI RAATTY 6 cut(s) 301, 1018, 1750, 2362, 2470, 2729
ArsI GACNNNNNNTTYG 4 cut(s) 2271, 2303, 2498, 2530
AseI ATTAAT 1 cut(s) 1845
AspLEI GCGC 4 cut(s) 1555, 1806, 2010, 2559
AsuC2I CCSGG 2 cut(s) 702, 2893
AvaI CYCGRG 1 cut(s) 447
AvaII GGWCC 4 cut(s) 498, 1036, 2291, 2591
AxyI CCTNAGG 1 cut(s) 2745
BaeGI GKGCMC 3 cut(s) 550, 2264, 2875
BaeI ACNNNNGTAYC 2 cut(s) 1143, 1176
BalI TGGCCA 1 cut(s) 2205
BanI GGYRCC 1 cut(s) 340
BanII GRGCYC 2 cut(s) 550, 3014
BarI GAAGNNNNNNTAC 2 cut(s) 780, 812
BbvI GCAGC 8 cut(s) 41, 1157, 1269, 1788, 1942, 1945, 2791, 3029
BccI CCATC 8 cut(s) 66, 797, 1614, 1823, 2226, 2342, 2582, 2681
BceAI ACGGC 1 cut(s) 207
BcgI CGANNNNNNTGC 2 cut(s) 1265, 1299
BciT130I CCWGG 1 cut(s) 2135
BciVI GTATCC 1 cut(s) 2920
BclI TGATCA 2 cut(s) 910, 2026
BcnI CCSGG 2 cut(s) 702, 2893
BcoDI GTCTC 5 cut(s) 189, 585, 823, 2499, 2706
BfmI CTRYAG 6 cut(s) 531, 1597, 2452, 2490, 2954, 3015
BfuAI ACCTGC 1 cut(s) 2445
BfuI GTATCC 1 cut(s) 2920
BglII AGATCT 1 cut(s) 202
BisI GCNGC 9 cut(s) 55, 756, 1146, 1258, 1802, 1956, 1959, 2805, 3018
BlsI GCNGC 9 cut(s) 56, 757, 1147, 1259, 1803, 1957, 1960, 2806, 3019
BmcAI AGTACT 1 cut(s) 2663
Bme1390I CCNGG 3 cut(s) 702, 2135, 2893
Bme18I GGWCC 4 cut(s) 498, 1036, 2291, 2591
BmeT110I CYCGRG 1 cut(s) 447
BmiI GGNNCC 4 cut(s) 342, 500, 548, 1737
BmrFI CCNGG 3 cut(s) 702, 2135, 2893
BmrI ACTGGG 1 cut(s) 399
BmsI GCATC 9 cut(s) 41, 172, 287, 437, 846, 1989, 2100, 2486, 2990
BmuI ACTGGG 1 cut(s) 399
BpmI CTGGAG 1 cut(s) 1083
BpuEI CTTGAG 2 cut(s) 1563, 2198
BpuMI CCSGG 2 cut(s) 702, 2893
BsaAI YACGTR 2 cut(s) 68, 465
BsaBI GATNNNNATC 2 cut(s) 15, 2114
BsaI GGTCTC 2 cut(s) 585, 823
BsaJI CCNNGG 6 cut(s) 919, 1039, 1759, 2133, 2145, 2785
BsaXI ACNNNNNCTCC 2 cut(s) 1874, 1904
Bsc4I CCNNNNNNNGG 9 cut(s) 350, 495, 707, 1148, 2017, 2338, 2473, 2588, 3055
Bse1I ACTGG 5 cut(s) 118, 150, 405, 2248, 2384
Bse21I CCTNAGG 1 cut(s) 2745
Bse3DI GCAATG 3 cut(s) 97, 2173, 2658
Bse8I GATNNNNATC 2 cut(s) 15, 2114
BseBI CCWGG 1 cut(s) 2135
BseDI CCNNGG 6 cut(s) 919, 1039, 1759, 2133, 2145, 2785
BseGI GGATG 9 cut(s) 77, 400, 861, 1030, 1210, 1366, 1375, 2501, 2965
BseJI GATNNNNATC 2 cut(s) 15, 2114
BseLI CCNNNNNNNGG 9 cut(s) 350, 495, 707, 1148, 2017, 2338, 2473, 2588, 3055
BseMI GCAATG 3 cut(s) 97, 2173, 2658
BseMII CTCAG 7 cut(s) 1778, 1862, 1884, 2381, 2736, 2841, 3055
BseNI ACTGG 5 cut(s) 118, 150, 405, 2248, 2384
BseRI GAGGAG 1 cut(s) 1910
BseSI GKGCMC 3 cut(s) 550, 2264, 2875
BseXI GCAGC 8 cut(s) 41, 1157, 1269, 1788, 1942, 1945, 2791, 3029
BsgI GTGCAG 1 cut(s) 1101
BshFI GGCC 9 cut(s) 548, 918, 1141, 1510, 1592, 1904, 2150, 2205, 2896
BshNI GGYRCC 1 cut(s) 340
BsiHKCI CYCGRG 1 cut(s) 447
BsiSI CCGG 3 cut(s) 701, 1807, 2893
BslFI GGGAC 1 cut(s) 1319
BslI CCNNNNNNNGG 9 cut(s) 350, 495, 707, 1148, 2017, 2338, 2473, 2588, 3055
BsmAI GTCTC 5 cut(s) 189, 585, 823, 2499, 2706
BsmFI GGGAC 1 cut(s) 1319
BsmI GAATGC 4 cut(s) 639, 2134, 2279, 2653
BsnI GGCC 9 cut(s) 548, 918, 1141, 1510, 1592, 1904, 2150, 2205, 2896
Bso31I GGTCTC 2 cut(s) 585, 823
BsoBI CYCGRG 1 cut(s) 447
Bsp120I GGGCCC 1 cut(s) 546
Bsp1286I GDGCHC 4 cut(s) 550, 2264, 2875, 3014
Bsp19I CCATGG 1 cut(s) 1039
BspACI CCGC 2 cut(s) 755, 1050
BspANI GGCC 9 cut(s) 548, 918, 1141, 1510, 1592, 1904, 2150, 2205, 2896
BspCNI CTCAG 7 cut(s) 1779, 1863, 1885, 2380, 2737, 2842, 3054
BspHI TCATGA 1 cut(s) 25
BspLI GGNNCC 4 cut(s) 342, 500, 548, 1737
BspMAI CTGCAG 3 cut(s) 535, 2456, 3019
BspMI ACCTGC 1 cut(s) 2445
BspPI GGATC 7 cut(s) 24, 1688, 2349, 2735, 2835, 2862, 3045
BspT107I GGYRCC 1 cut(s) 340
BspTNI GGTCTC 2 cut(s) 585, 823
BsrDI GCAATG 3 cut(s) 97, 2173, 2658
BsrI ACTGG 5 cut(s) 118, 150, 405, 2248, 2384
BssECI CCNNGG 6 cut(s) 919, 1039, 1759, 2133, 2145, 2785
BssNAI GTATAC 1 cut(s) 2669
BssT1I CCWWGG 4 cut(s) 919, 1039, 1759, 2785
Bst1107I GTATAC 1 cut(s) 2669
Bst2UI CCWGG 1 cut(s) 2135
Bst6I CTCTTC 7 cut(s) 225, 264, 828, 1130, 1418, 2515, 2960
BstAPI GCANNNNNTGC 1 cut(s) 1955
BstBAI YACGTR 2 cut(s) 68, 465
BstC8I GCNNGC 7 cut(s) 519, 881, 1143, 1288, 1594, 1963, 2019
BstDSI CCRYGG 1 cut(s) 1039
BstENI CCTNNNNNAGG 2 cut(s) 2015, 2336
BstF5I GGATG 9 cut(s) 77, 400, 861, 1030, 1210, 1366, 1375, 2501, 2965
BstHHI GCGC 4 cut(s) 1555, 1806, 2010, 2559
BstMAI GTCTC 5 cut(s) 189, 585, 823, 2499, 2706
BstMWI GCNNNNNNNGC 3 cut(s) 1223, 1955, 2014
BstNI CCWGG 1 cut(s) 2135
BstNSI RCATGY 1 cut(s) 2811
BstSCI CCNGG 3 cut(s) 700, 2133, 2891
BstSFI CTRYAG 6 cut(s) 531, 1597, 2452, 2490, 2954, 3015
BstSLI GKGCMC 3 cut(s) 550, 2264, 2875
BstSNI TACGTA 1 cut(s) 465
BstV1I GCAGC 8 cut(s) 41, 1157, 1269, 1788, 1942, 1945, 2791, 3029
BstX2I RGATCY 4 cut(s) 202, 2341, 2827, 3037
BstYI RGATCY 4 cut(s) 202, 2341, 2827, 3037
BstZ17I GTATAC 1 cut(s) 2669
Bsu36I CCTNAGG 1 cut(s) 2745
BsuI GTATCC 1 cut(s) 2920
BsuRI GGCC 9 cut(s) 548, 918, 1141, 1510, 1592, 1904, 2150, 2205, 2896
BtgI CCRYGG 1 cut(s) 1039
BtsCI GGATG 9 cut(s) 77, 400, 861, 1030, 1210, 1366, 1375, 2501, 2965
BtsI GCAGTG 1 cut(s) 2449
BtsIMutI CAGTG 7 cut(s) 226, 1193, 2055, 2228, 2449, 2736, 2751
BveI ACCTGC 1 cut(s) 2445
Cac8I GCNNGC 7 cut(s) 519, 881, 1143, 1288, 1594, 1963, 2019
CaiI CAGNNNCTG 1 cut(s) 1148
CciI TCATGA 1 cut(s) 25
CfoI GCGC 4 cut(s) 1555, 1806, 2010, 2559
CviAII CATG 9 cut(s) 26, 181, 852, 1040, 1250, 2207, 2797, 2808, 2813
DrdI GACNNNNNNGTC 1 cut(s) 2720
DseDI GACNNNNNNGTC 1 cut(s) 2720
EaeI YGGCCR 1 cut(s) 2203
Eam1104I CTCTTC 7 cut(s) 225, 264, 828, 1130, 1418, 2515, 2960
EarI CTCTTC 7 cut(s) 225, 264, 828, 1130, 1418, 2515, 2960
Eco105I TACGTA 1 cut(s) 465
Eco130I CCWWGG 4 cut(s) 919, 1039, 1759, 2785
Eco24I GRGCYC 2 cut(s) 550, 3014
Eco31I GGTCTC 2 cut(s) 585, 823
Eco47I GGWCC 4 cut(s) 498, 1036, 2291, 2591
Eco57I CTGAAG 4 cut(s) 845, 1029, 1095, 1660
Eco81I CCTNAGG 1 cut(s) 2745
Eco88I CYCGRG 1 cut(s) 447
EcoNI CCTNNNNNAGG 2 cut(s) 2015, 2336
EcoO109I RGGNCCY 5 cut(s) 498, 546, 916, 1590, 1902
EcoRI GAATTC 2 cut(s) 2362, 2729
EcoRII CCWGG 1 cut(s) 2133
EcoT14I CCWWGG 4 cut(s) 919, 1039, 1759, 2785
EcoT38I GRGCYC 2 cut(s) 550, 3014
ErhI CCWWGG 4 cut(s) 919, 1039, 1759, 2785
FaeI CATG 9 cut(s) 29, 184, 855, 1043, 1253, 2210, 2800, 2811, 2816
FaqI GGGAC 1 cut(s) 1319
FatI CATG 9 cut(s) 25, 180, 851, 1039, 1249, 2206, 2796, 2807, 2812
FauNDI CATATG 3 cut(s) 621, 1312, 1951
FbaI TGATCA 2 cut(s) 910, 2026
FblI GTMKAC 1 cut(s) 2668
Fnu4HI GCNGC 9 cut(s) 55, 756, 1146, 1258, 1802, 1956, 1959, 2805, 3018
FokI GGATG 9 cut(s) 84, 387, 868, 1037, 1217, 1373, 1382, 2508, 2972
FriOI GRGCYC 2 cut(s) 550, 3014
Fsp4HI GCNGC 9 cut(s) 55, 756, 1146, 1258, 1802, 1956, 1959, 2805, 3018
GlaI GCGC 4 cut(s) 1554, 1805, 2009, 2558
GluI GCNGC 9 cut(s) 55, 756, 1146, 1258, 1802, 1956, 1959, 2805, 3018
GsuI CTGGAG 1 cut(s) 1083
HaeIII GGCC 9 cut(s) 548, 918, 1141, 1510, 1592, 1904, 2150, 2205, 2896
HapII CCGG 3 cut(s) 701, 1807, 2893
HhaI GCGC 4 cut(s) 1555, 1806, 2010, 2559
Hin1II CATG 9 cut(s) 29, 184, 855, 1043, 1253, 2210, 2800, 2811, 2816
Hin6I GCGC 4 cut(s) 1553, 1804, 2008, 2557
HinP1I GCGC 4 cut(s) 1553, 1804, 2008, 2557
HincII GTYRAC 2 cut(s) 1066, 1417
HindII GTYRAC 2 cut(s) 1066, 1417
HindIII AAGCTT 2 cut(s) 877, 1011
HpaII CCGG 3 cut(s) 701, 1807, 2893
Hpy166II GTNNAC 7 cut(s) 42, 1066, 1417, 1637, 2096, 2406, 2669
Hpy8I GTNNAC 7 cut(s) 42, 1066, 1417, 1637, 2096, 2406, 2669
HpyCH4IV ACGT 2 cut(s) 67, 464
HpyF10VI GCNNNNNNNGC 3 cut(s) 1223, 1955, 2014
HpySE526I ACGT 2 cut(s) 67, 464
Hsp92II CATG 9 cut(s) 29, 184, 855, 1043, 1253, 2210, 2800, 2811, 2816
HspAI GCGC 4 cut(s) 1553, 1804, 2008, 2557
Ksp22I TGATCA 2 cut(s) 910, 2026
LmnI GCTCC 4 cut(s) 160, 1198, 1779, 2476
Lsp1109I GCAGC 8 cut(s) 41, 1157, 1269, 1788, 1942, 1945, 2791, 3029
LweI GCATC 9 cut(s) 41, 172, 287, 437, 846, 1989, 2100, 2486, 2990
MaeII ACGT 2 cut(s) 67, 464
MfeI CAATTG 2 cut(s) 1653, 2268
MflI RGATCY 4 cut(s) 202, 2341, 2827, 3037
MhlI GDGCHC 4 cut(s) 550, 2264, 2875, 3014
MlsI TGGCCA 1 cut(s) 2205
MluNI TGGCCA 1 cut(s) 2205
MlyI GAGTC 2 cut(s) 2501, 2692
MmeI TCCRAC 2 cut(s) 2613, 2867
Mox20I TGGCCA 1 cut(s) 2205
MscI TGGCCA 1 cut(s) 2205
MslI CAYNNNNRTG 5 cut(s) 24, 107, 624, 2223, 2756
Msp20I TGGCCA 1 cut(s) 2205
MspA1I CMGCKG 1 cut(s) 1148
MspI CCGG 3 cut(s) 701, 1807, 2893
MspR9I CCNGG 3 cut(s) 702, 2135, 2893
MunI CAATTG 2 cut(s) 1653, 2268
Mva1269I GAATGC 4 cut(s) 639, 2134, 2279, 2653
MvaI CCWGG 1 cut(s) 2135
MwoI GCNNNNNNNGC 3 cut(s) 1223, 1955, 2014
NciI CCSGG 2 cut(s) 702, 2893
NcoI CCATGG 1 cut(s) 1039
NdeI CATATG 3 cut(s) 621, 1312, 1951
NlaIII CATG 9 cut(s) 29, 184, 855, 1043, 1253, 2210, 2800, 2811, 2816
NlaIV GGNNCC 4 cut(s) 342, 500, 548, 1737
NmuCI GTSAC 6 cut(s) 109, 416, 731, 2445, 2749, 2766
NspI RCATGY 1 cut(s) 2811
OliI CACNNNNGTG 1 cut(s) 107
PagI TCATGA 1 cut(s) 25
PctI GAATGC 4 cut(s) 639, 2134, 2279, 2653
PfeI GAWTC 8 cut(s) 897, 1079, 1270, 1567, 1928, 2075, 2312, 2839
PflMI CCANNNNNTGG 2 cut(s) 1148, 2588
PfoI TCCNGGA 1 cut(s) 700
PkrI GCNGC 9 cut(s) 56, 757, 1147, 1259, 1803, 1957, 1960, 2806, 3019
PleI GAGTC 2 cut(s) 2501, 2692
PpsI GAGTC 2 cut(s) 2501, 2692
Ppu21I YACGTR 2 cut(s) 68, 465
PpuMI RGGWCCY 1 cut(s) 498
PshBI ATTAAT 1 cut(s) 1845
PsiI TTATAA 1 cut(s) 369
Psp5II RGGWCCY 1 cut(s) 498
Psp6I CCWGG 1 cut(s) 2133
PspGI CCWGG 1 cut(s) 2133
PspN4I GGNNCC 4 cut(s) 342, 500, 548, 1737
PspOMI GGGCCC 1 cut(s) 546
PspPPI RGGWCCY 1 cut(s) 498
PstI CTGCAG 3 cut(s) 535, 2456, 3019
PstNI CAGNNNCTG 1 cut(s) 1148
PsuI RGATCY 4 cut(s) 202, 2341, 2827, 3037
PvuII CAGCTG 1 cut(s) 1148
RseI CAYNNNNRTG 5 cut(s) 24, 107, 624, 2223, 2756
SatI GCNGC 9 cut(s) 55, 756, 1146, 1258, 1802, 1956, 1959, 2805, 3018
ScaI AGTACT 1 cut(s) 2663
SchI GAGTC 2 cut(s) 2501, 2692
ScrFI CCNGG 3 cut(s) 702, 2135, 2893
SduI GDGCHC 4 cut(s) 550, 2264, 2875, 3014
SfaNI GCATC 9 cut(s) 41, 172, 287, 437, 846, 1989, 2100, 2486, 2990
SfcI CTRYAG 6 cut(s) 531, 1597, 2452, 2490, 2954, 3015
SinI GGWCC 4 cut(s) 498, 1036, 2291, 2591
SmiMI CAYNNNNRTG 5 cut(s) 24, 107, 624, 2223, 2756
SmlI CTYRAG 2 cut(s) 1578, 2177
SmoI CTYRAG 2 cut(s) 1578, 2177
SnaBI TACGTA 1 cut(s) 465
SsiI CCGC 2 cut(s) 755, 1050
SspI AATATT 1 cut(s) 1990
StyD4I CCNGG 3 cut(s) 700, 2133, 2891
StyI CCWWGG 4 cut(s) 919, 1039, 1759, 2785
TaiI ACGT 2 cut(s) 70, 467
TaqI TCGA 6 cut(s) 92, 974, 1183, 1606, 2865, 2911
TaqII GACCGA 2 cut(s) 805, 2279
TatI WGTACW 5 cut(s) 1237, 2093, 2173, 2403, 2661
TauI GCSGC 1 cut(s) 758
TfiI GAWTC 8 cut(s) 897, 1079, 1270, 1567, 1928, 2075, 2312, 2839
TscAI CASTG 7 cut(s) 226, 1193, 2062, 2228, 2456, 2743, 2758
TseFI GTSAC 6 cut(s) 109, 416, 731, 2445, 2749, 2766
TseI GCWGC 8 cut(s) 54, 1145, 1257, 1801, 1955, 1958, 2804, 3017
Tsp45I GTSAC 6 cut(s) 109, 416, 731, 2445, 2749, 2766
TspGWI ACGGA 1 cut(s) 551
TspRI CASTG 7 cut(s) 226, 1193, 2062, 2228, 2456, 2743, 2758
Van91I CCANNNNNTGG 2 cut(s) 1148, 2588
VpaK11BI GGWCC 4 cut(s) 498, 1036, 2291, 2591
VspI ATTAAT 1 cut(s) 1845
XagI CCTNNNNNAGG 2 cut(s) 2015, 2336
XapI RAATTY 6 cut(s) 301, 1018, 1750, 2362, 2470, 2729
XbaI TCTAGA 2 cut(s) 332, 2102
XceI RCATGY 1 cut(s) 2811
XmiI GTMKAC 1 cut(s) 2668
ZrmI AGTACT 1 cut(s) 2663
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.