Rorug04G0377900

recombinational repair

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0003214
Physical Location & Seq
Reverse (-)
54876009 .. 54879392
3384 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0377900.1

Sequence Viewer

Length: 1911 bp
ATGTCTCGTAAGCTGGATAGCCCCGTACAGACCCAAATGGCAGTGGCATTATTTAACAGCCCGCTTACCGGTGAGTATGGGAGCAAGAGGGTGGAAGGGAAGCAGCCTGCTGGTCGGAGAAGAGTTTATGTGCAAACTGAAACTGGATGTGTCCTCGGGATGGAATTAGATCGCGGTGACAATGCCCACACTGTGAAGAGGAGATTGCAGCTTGCTCTCAATGTTCCAACTGAAGAGAGCTCGTTGACATTTGGAGATATGGTGTTGAAGAACGATCTCAGTGCAGTTCGAAATGATTCCCCTCTTCTTCTTACACGTAACCTTATGCACAGAAGCTCATCAACTCCATGTTTATCACCTACTGGGAGGGATATGCAGCAGAGAGATTGGAGTGGTCCTATAGTGATATTAGGGAACTCAGATCAGTTTGCTCGAACAAAGCATGTCGTCAAGGACATTAAGAAGGCCATCAAGATGGGGGTTGATCCAATTCCTGTGCATAGTGGCCTTGGAGGTGCATACTATTTTAGGAATAGTAGAGGCGAAAGTGTTGCAATAGTGAAGCCAACTGATGAAGAACCTTTTGCCCCGAATAACCCAAAAGGTTTTGTCGGTAAAGCTCTGGGCCAACCAGGTTTGAAGCGTTCAGTGCGGGTTGGGGAAACTGGTTTCAGAGAAGTTGCAGCTTATCTGCTCGACAAAGATCACTCTGCAAATGTGCCTCCCACTGCCTTGGTGAAGATCACTCACTCAATCTTCAACATAAATGATGGGGTGAATGGGAACAAGCTGCAAAAGAAGAGGCTGGTCAGCAAGATTGCATCTTGCCAACAATACATACAACATGATTTTGATGCCAGCGATCATGGGACATCCAGCTTTCCAGTAGCAGCTGTGCATCGCATAGGGATTTTAGACATTAGGATTTTAAACACAGACAGGCATGCGGGGAACCTCTTAGTTAGGAAACTTGATGGTGTTGGGAGGTTTGGTCAAGTGGACCTCATTCCGATTGACCATGGCCTTTGCTTGCCAGAATGTTTGGAGGACCCGTACTTTGAGTGGATACATTGGCCTCAGGCTTCTATTCCATTCTCAGATGACGAGCTTGATTACATAGAAAAGCTTGATCCGGTTGAGGAGTGTGAGATGCTGCGAAGGGAGCTTCCCATGATACGAGAGGCTTGTCTCAGGGTTTTGGTTCTCTGCACCATTTTTCTGAAGGAGTCTGCTACTTATGGTCTCTGTCTTGCTGAAATAGGTGAGATGATGACTAGGGAATTTCGTAGTGGTGAGGAGGAGCCTAGTGAACTTGAGGTGATTTGCATGGAAGCAAGGAGGATGGTAGCGGAAAGGGAGGTGCCGTCCCCCAAGGCTGATGTGGGAGTTGAGGAGTTCCTATTTGATATAGATTGTGAGGACGCAGAATCAGACTGCAAATCTGCAGCAGAGGATTATGTGACCAGGACAGCTTTTCCATTTGGAAATGGGAGTGGACATGTTCGCTCTCCTCTCTCTAAACTGGAAGAAAGCATTGAGGAGGAAGAGGAAAGTGAAGGAGAAGAACAAGAGGTGTTAGCAAGTCTGCCACCTTGTGAACATATCCCATCAGTAGCAAAGCTTTCTATGTCGCTGAAGACTACAAGTTTGGGTGAGAAGAACCTCCTGAAATACGTGGGAGCAAAAACAGAAAATGGATACATGGCGAATACATCATCTGGACACAGGAGTGCGAGTGAGCAACTTCCTGCAAGCATGAGCTTTGTGAAGCTGGCTGACATGAATGAGGATGATTGGACCTTGTTTCTAGAGAAGTTTCAAGATCTGCTTTACCCGGCATTTGCAAAACGAAAGTCTGTTACTCTAGGTCAGAGGCAGAGACAGAGGCTTGGTACCTCTTGCCAGTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000228 GO:0000278 GO:0000724 GO:0000725 GO:0000785 GO:0000790 GO:0003674 GO:0003678 GO:0003824 GO:0004003 GO:0004386 GO:0004842 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006281 GO:0006302 GO:0006304 GO:0006305 GO:0006306 GO:0006310 GO:0006464 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007154 GO:0008026 GO:0008094 GO:0008150 GO:0008152 GO:0008270 GO:0009058 GO:0009059 GO:0009292 GO:0009294 GO:0009605 GO:0009892 GO:0009894 GO:0009895 GO:0009987 GO:0009991 GO:0010468 GO:0010605 GO:0010629 GO:0016043 GO:0016070 GO:0016458 GO:0016462 GO:0016567 GO:0016740 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019222 GO:0019538 GO:0019787 GO:0022402 GO:0030162 GO:0031047 GO:0031323 GO:0031324 GO:0031329 GO:0031330 GO:0031668 GO:0031974 GO:0031981 GO:0032259 GO:0032268 GO:0032269 GO:0032392 GO:0032434 GO:0032435 GO:0032446 GO:0032508 GO:0033260 GO:0033554 GO:0034641 GO:0034645 GO:0036211 GO:0042176 GO:0042177 GO:0042262 GO:0042623 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0044728 GO:0044764 GO:0044786 GO:0045003 GO:0045005 GO:0045861 GO:0046483 GO:0046872 GO:0046914 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0051276 GO:0051704 GO:0051716 GO:0060255 GO:0061136 GO:0061630 GO:0061659 GO:0065007 GO:0070013 GO:0070035 GO:0070647 GO:0071103 GO:0071496 GO:0071704 GO:0071840 GO:0080090 GO:0080188 GO:0090304 GO:0140083 GO:0140096 GO:0140097 GO:1901360 GO:1901564 GO:1901576 GO:1901799 GO:1902298 GO:1902969 GO:1903047 GO:1903050 GO:1903051 GO:1903362 GO:1903363 GO:1990505 GO:2000058 GO:2000059
KEGG Pathways
Metabolic & Signaling
ko04918 map04918
Pfam Domains
Protein Families
Helicase_C SNF2_N zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3

Protein Analysis

636

Amino Acids

70.74

Weight (kDa)

5.5

Isoelectric Point (pI)

56.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PI3_PI4_kinase PF00454 170 - 419 5.6e-44 Phosphatidylinositol 3- and 4-kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1892
AccB1I GGYRCC 2 cut(s) 1360, 1892
AccII CGCG 1 cut(s) 174
AciI CCGC 5 cut(s) 62, 174, 652, 947, 1349
AclWI GGATC 2 cut(s) 479, 1124
AcsI RAATTY 1 cut(s) 1280
AcuI CTGAAG 3 cut(s) 252, 1241, 1655
AdeI CACNNNGTG 2 cut(s) 193, 1595
AfaI GTAC 3 cut(s) 27, 1055, 1894
AfiI CCNNNNNNNGG 2 cut(s) 68, 160
AflIII ACRYGT 2 cut(s) 314, 1498
AgeI ACCGGT 1 cut(s) 68
AgsI TTSAA 4 cut(s) 268, 640, 760, 1820
AjnI CCWGG 2 cut(s) 631, 1463
AleI CACNNNNGTG 1 cut(s) 1728
Alw21I GWGCWC 1 cut(s) 242
Alw26I GTCTC 4 cut(s) 9, 1193, 1247, 1873
AlwI GGATC 2 cut(s) 479, 1124
Ama87I CYCGRG 1 cut(s) 155
AoxI GGCC 5 cut(s) 465, 505, 625, 1021, 1073
ApeKI GCWGC 8 cut(s) 103, 208, 376, 683, 790, 890, 1153, 1445
ApoI RAATTY 1 cut(s) 1280
ArsI GACNNNNNNTTYG 6 cut(s) 1040, 1072, 1630, 1662, 1838, 1870
AsiGI ACCGGT 1 cut(s) 68
Asp700I GAANNNNTTC 1 cut(s) 295
Asp718I GGTACC 1 cut(s) 1892
AspS9I GGNCC 5 cut(s) 395, 625, 1000, 1048, 1797
AsuC2I CCSGG 1 cut(s) 1835
AsuHPI GGTGA 9 cut(s) 83, 188, 348, 748, 787, 1274, 1304, 1330, 1664
AsuII TTCGAA 1 cut(s) 289
AvaI CYCGRG 1 cut(s) 155
AvaII GGWCC 4 cut(s) 395, 1000, 1048, 1797
AxyI CCTNAGG 1 cut(s) 1077
BanI GGYRCC 2 cut(s) 1360, 1892
BanII GRGCYC 1 cut(s) 242
BbsI GAAGAC 1 cut(s) 1643
Bbv12I GWGCWC 1 cut(s) 242
BbvI GCAGC 8 cut(s) 115, 220, 388, 695, 777, 902, 1140, 1457
BccI CCATC 7 cut(s) 154, 469, 476, 764, 968, 1336, 1615
BceAI ACGGC 1 cut(s) 1348
BcgI CGANNNNNNTGC 4 cut(s) 263, 297, 533, 567
BciT130I CCWGG 2 cut(s) 633, 1465
BciVI GTATCC 2 cut(s) 1059, 1691
BcnI CCSGG 1 cut(s) 1835
BcoDI GTCTC 4 cut(s) 9, 1193, 1247, 1873
BfaI CTAG 4 cut(s) 1275, 1305, 1808, 1865
BfmI CTRYAG 2 cut(s) 399, 1443
BfuI GTATCC 2 cut(s) 1059, 1691
BglII AGATCT 1 cut(s) 1822
BisI GCNGC 8 cut(s) 104, 209, 377, 684, 791, 891, 1154, 1446
BlsI GCNGC 8 cut(s) 105, 210, 378, 685, 792, 892, 1155, 1447
Bme1390I CCNGG 3 cut(s) 633, 1465, 1835
Bme18I GGWCC 4 cut(s) 395, 1000, 1048, 1797
BmeT110I CYCGRG 1 cut(s) 155
BmgT120I GGNCC 5 cut(s) 395, 625, 1000, 1048, 1797
BmiI GGNNCC 5 cut(s) 953, 1050, 1302, 1362, 1894
BmrFI CCNGG 3 cut(s) 633, 1465, 1835
BmrI ACTGGG 1 cut(s) 372
BmsI GCATC 4 cut(s) 830, 844, 907, 1140
BmuI ACTGGG 1 cut(s) 372
BpiI GAAGAC 1 cut(s) 1643
Bpu14I TTCGAA 1 cut(s) 289
BpuEI CTTGAG 1 cut(s) 1334
BpuMI CCSGG 1 cut(s) 1835
BsaAI YACGTR 2 cut(s) 317, 1675
BsaI GGTCTC 1 cut(s) 1247
BsaJI CCNNGG 5 cut(s) 154, 508, 732, 1018, 1371
BsaWI WCCGGW 2 cut(s) 68, 1132
Bsc4I CCNNNNNNNGG 2 cut(s) 68, 160
Bse118I RCCGGY 1 cut(s) 68
Bse1I ACTGG 6 cut(s) 148, 367, 670, 884, 1527, 1903
Bse21I CCTNAGG 1 cut(s) 1077
BseBI CCWGG 2 cut(s) 633, 1465
BseDI CCNNGG 5 cut(s) 154, 508, 732, 1018, 1371
BseGI GGATG 5 cut(s) 152, 165, 872, 1347, 1795
BseLI CCNNNNNNNGG 2 cut(s) 68, 160
BseMII CTCAG 5 cut(s) 292, 432, 1091, 1110, 1204
BseNI ACTGG 6 cut(s) 148, 367, 670, 884, 1527, 1903
BseRI GAGGAG 7 cut(s) 214, 1154, 1310, 1313, 1406, 1500, 1553
BseXI GCAGC 8 cut(s) 115, 220, 388, 695, 777, 902, 1140, 1457
BsgI GTGCAG 2 cut(s) 303, 1192
Bsh1236I CGCG 1 cut(s) 174
BshFI GGCC 5 cut(s) 467, 507, 627, 1023, 1075
BshNI GGYRCC 2 cut(s) 1360, 1892
BshTI ACCGGT 1 cut(s) 68
BsiHKAI GWGCWC 1 cut(s) 242
BsiHKCI CYCGRG 1 cut(s) 155
BsiSI CCGG 3 cut(s) 69, 1133, 1835
BslFI GGGAC 2 cut(s) 883, 1351
BslI CCNNNNNNNGG 2 cut(s) 68, 160
BsmAI GTCTC 4 cut(s) 9, 1193, 1247, 1873
BsmFI GGGAC 2 cut(s) 883, 1351
BsnI GGCC 5 cut(s) 467, 507, 627, 1023, 1075
Bso31I GGTCTC 1 cut(s) 1247
BsoBI CYCGRG 1 cut(s) 155
Bsp119I TTCGAA 1 cut(s) 289
Bsp1286I GDGCHC 1 cut(s) 242
Bsp143I GATC 9 cut(s) 169, 274, 421, 484, 703, 741, 862, 1129, 1822
Bsp19I CCATGG 1 cut(s) 1018
BspACI CCGC 5 cut(s) 62, 174, 652, 947, 1349
BspANI GGCC 5 cut(s) 467, 507, 627, 1023, 1075
BspCNI CTCAG 5 cut(s) 291, 431, 1090, 1109, 1203
BspFNI CGCG 1 cut(s) 174
BspLI GGNNCC 5 cut(s) 953, 1050, 1302, 1362, 1894
BspMAI CTGCAG 1 cut(s) 1447
BspPI GGATC 2 cut(s) 479, 1124
BspT104I TTCGAA 1 cut(s) 289
BspT107I GGYRCC 2 cut(s) 1360, 1892
BspTNI GGTCTC 1 cut(s) 1247
BsrFI RCCGGY 1 cut(s) 68
BsrI ACTGG 6 cut(s) 148, 367, 670, 884, 1527, 1903
BssAI RCCGGY 1 cut(s) 68
BssECI CCNNGG 5 cut(s) 154, 508, 732, 1018, 1371
BssMI GATC 9 cut(s) 169, 274, 421, 484, 703, 741, 862, 1129, 1822
BssT1I CCWWGG 4 cut(s) 508, 732, 1018, 1371
Bst2UI CCWGG 2 cut(s) 633, 1465
Bst4CI ACNGT 1 cut(s) 193
Bst6I CTCTTC 6 cut(s) 115, 191, 228, 309, 794, 1539
BstBAI YACGTR 2 cut(s) 317, 1675
BstBI TTCGAA 1 cut(s) 289
BstC8I GCNNGC 8 cut(s) 62, 108, 213, 859, 945, 1031, 1753, 1773
BstDEI CTNAG 6 cut(s) 278, 418, 958, 1077, 1096, 1190
BstDSI CCRYGG 1 cut(s) 1018
BstF5I GGATG 5 cut(s) 152, 165, 872, 1347, 1795
BstFNI CGCG 1 cut(s) 174
BstKTI GATC 9 cut(s) 172, 277, 424, 487, 706, 744, 865, 1132, 1825
BstMAI GTCTC 4 cut(s) 9, 1193, 1247, 1873
BstMBI GATC 9 cut(s) 169, 274, 421, 484, 703, 741, 862, 1129, 1822
BstMWI GCNNNNNNNGC 2 cut(s) 649, 1162
BstNI CCWGG 2 cut(s) 633, 1465
BstNSI RCATGY 3 cut(s) 446, 947, 1502
BstSCI CCNGG 3 cut(s) 631, 1463, 1833
BstSFI CTRYAG 2 cut(s) 399, 1443
BstUI CGCG 1 cut(s) 174
BstV1I GCAGC 8 cut(s) 115, 220, 388, 695, 777, 902, 1140, 1457
BstV2I GAAGAC 1 cut(s) 1643
BstX2I RGATCY 1 cut(s) 1822
BstXI CCANNNNNNTGG 2 cut(s) 475, 733
BstYI RGATCY 1 cut(s) 1822
Bsu36I CCTNAGG 1 cut(s) 1077
BsuI GTATCC 2 cut(s) 1059, 1691
BsuRI GGCC 5 cut(s) 467, 507, 627, 1023, 1075
BtgI CCRYGG 1 cut(s) 1018
BtgZI GCGATG 1 cut(s) 884
BtsCI GGATG 5 cut(s) 152, 165, 872, 1347, 1795
BtsI GCAGTG 2 cut(s) 48, 726
BtsIMutI CAGTG 5 cut(s) 48, 189, 286, 654, 726
Cac8I GCNNGC 8 cut(s) 62, 108, 213, 859, 945, 1031, 1753, 1773
Cfr10I RCCGGY 1 cut(s) 68
Cfr13I GGNCC 5 cut(s) 395, 625, 1000, 1048, 1797
CseI GACGC 1 cut(s) 1430
CsiI ACCWGGT 1 cut(s) 631
Csp6I GTAC 3 cut(s) 26, 1054, 1893
CspAI ACCGGT 1 cut(s) 68
CviQI GTAC 3 cut(s) 26, 1054, 1893
DdeI CTNAG 6 cut(s) 278, 418, 958, 1077, 1096, 1190
DpnI GATC 9 cut(s) 171, 276, 423, 486, 705, 743, 864, 1131, 1824
DpnII GATC 9 cut(s) 169, 274, 421, 484, 703, 741, 862, 1129, 1822
DraI TTTAAA 1 cut(s) 930
DraIII CACNNNGTG 2 cut(s) 193, 1595
Eam1104I CTCTTC 6 cut(s) 115, 191, 228, 309, 794, 1539
EarI CTCTTC 6 cut(s) 115, 191, 228, 309, 794, 1539
Ecl136II GAGCTC 1 cut(s) 240
Eco130I CCWWGG 4 cut(s) 508, 732, 1018, 1371
Eco24I GRGCYC 1 cut(s) 242
Eco31I GGTCTC 1 cut(s) 1247
Eco47I GGWCC 4 cut(s) 395, 1000, 1048, 1797
Eco53kI GAGCTC 1 cut(s) 240
Eco57I CTGAAG 3 cut(s) 252, 1241, 1655
Eco81I CCTNAGG 1 cut(s) 1077
Eco88I CYCGRG 1 cut(s) 155
EcoICRI GAGCTC 1 cut(s) 240
EcoO109I RGGNCCY 1 cut(s) 1048
EcoRII CCWGG 2 cut(s) 631, 1463
EcoT14I CCWWGG 4 cut(s) 508, 732, 1018, 1371
EcoT38I GRGCYC 1 cut(s) 242
ErhI CCWWGG 4 cut(s) 508, 732, 1018, 1371
FalI AAGNNNNNCTT 2 cut(s) 1812, 1844
FaqI GGGAC 2 cut(s) 883, 1351
FauI CCCGC 3 cut(s) 69, 645, 940
Fnu4HI GCNGC 8 cut(s) 104, 209, 377, 684, 791, 891, 1154, 1446
FokI GGATG 5 cut(s) 159, 172, 859, 1354, 1802
FriOI GRGCYC 1 cut(s) 242
Fsp4HI GCNGC 8 cut(s) 104, 209, 377, 684, 791, 891, 1154, 1446
FspBI CTAG 4 cut(s) 1275, 1305, 1808, 1865
GluI GCNGC 8 cut(s) 104, 209, 377, 684, 791, 891, 1154, 1446
HaeIII GGCC 5 cut(s) 467, 507, 627, 1023, 1075
HapII CCGG 3 cut(s) 69, 1133, 1835
HgaI GACGC 1 cut(s) 1430
HincII GTYRAC 1 cut(s) 246
HindII GTYRAC 1 cut(s) 246
HindIII AAGCTT 2 cut(s) 1124, 1619
HinfI GANTC 3 cut(s) 296, 1226, 1427
HpaII CCGG 3 cut(s) 69, 1133, 1835
HphI GGTGA 9 cut(s) 83, 188, 348, 748, 787, 1274, 1304, 1330, 1664
Hpy166II GTNNAC 5 cut(s) 246, 1000, 1310, 1496, 1598
Hpy188I TCNGA 8 cut(s) 117, 421, 674, 1011, 1099, 1221, 1432, 1872
Hpy188III TCNNGA 6 cut(s) 157, 472, 1666, 1719, 1808, 1820
Hpy8I GTNNAC 5 cut(s) 246, 1000, 1310, 1496, 1598
HpyAV CCTTC 5 cut(s) 89, 457, 1152, 1216, 1550
HpyCH4III ACNGT 1 cut(s) 193
HpyCH4IV ACGT 2 cut(s) 316, 1674
HpyF10VI GCNNNNNNNGC 2 cut(s) 649, 1162
HpyF3I CTNAG 6 cut(s) 278, 418, 958, 1077, 1096, 1190
HpySE526I ACGT 2 cut(s) 316, 1674
KpnI GGTACC 1 cut(s) 1896
Kzo9I GATC 9 cut(s) 169, 274, 421, 484, 703, 741, 862, 1129, 1822
LmnI GCTCC 4 cut(s) 81, 1162, 1300, 1679
Lsp1109I GCAGC 8 cut(s) 115, 220, 388, 695, 777, 902, 1140, 1457
LweI GCATC 4 cut(s) 830, 844, 907, 1140
MabI ACCWGGT 1 cut(s) 631
MaeI CTAG 4 cut(s) 1275, 1305, 1808, 1865
MaeII ACGT 2 cut(s) 316, 1674
MaeIII GTNAC 4 cut(s) 176, 317, 1459, 1858
MalI GATC 9 cut(s) 171, 276, 423, 486, 705, 743, 864, 1131, 1824
MboI GATC 9 cut(s) 169, 274, 421, 484, 703, 741, 862, 1129, 1822
MflI RGATCY 1 cut(s) 1822
MhlI GDGCHC 1 cut(s) 242
MluCI AATT 3 cut(s) 164, 489, 1280
MlyI GAGTC 1 cut(s) 1235
MmeI TCCRAC 2 cut(s) 95, 251
MroXI GAANNNNTTC 1 cut(s) 295
MseI TTAA 3 cut(s) 54, 459, 929
MslI CAYNNNNRTG 2 cut(s) 473, 1728
MspA1I CMGCKG 1 cut(s) 893
MspI CCGG 3 cut(s) 69, 1133, 1835
MspR9I CCNGG 3 cut(s) 633, 1465, 1835
MvaI CCWGG 2 cut(s) 633, 1465
MvnI CGCG 1 cut(s) 174
MwoI GCNNNNNNNGC 2 cut(s) 649, 1162
NciI CCSGG 1 cut(s) 1835
NcoI CCATGG 1 cut(s) 1018
NdeII GATC 9 cut(s) 169, 274, 421, 484, 703, 741, 862, 1129, 1822
NlaIV GGNNCC 5 cut(s) 953, 1050, 1302, 1362, 1894
NmuCI GTSAC 2 cut(s) 176, 1459
NspI RCATGY 3 cut(s) 446, 947, 1502
NspV TTCGAA 1 cut(s) 289
OliI CACNNNNGTG 1 cut(s) 1728
PaeI GCATGC 1 cut(s) 947
PciI ACATGT 1 cut(s) 1498
PdmI GAANNNNTTC 1 cut(s) 295
PfeI GAWTC 2 cut(s) 296, 1427
PinAI ACCGGT 1 cut(s) 68
PkrI GCNGC 8 cut(s) 105, 210, 378, 685, 792, 892, 1155, 1447
PleI GAGTC 1 cut(s) 1234
PpsI GAGTC 1 cut(s) 1234
Ppu21I YACGTR 2 cut(s) 317, 1675
PpuMI RGGWCCY 1 cut(s) 1048
PscI ACATGT 1 cut(s) 1498
Psp124BI GAGCTC 1 cut(s) 242
Psp5II RGGWCCY 1 cut(s) 1048
Psp6I CCWGG 2 cut(s) 631, 1463
PspGI CCWGG 2 cut(s) 631, 1463
PspN4I GGNNCC 5 cut(s) 953, 1050, 1302, 1362, 1894
PspPI GGNCC 5 cut(s) 395, 625, 1000, 1048, 1797
PspPPI RGGWCCY 1 cut(s) 1048
PstI CTGCAG 1 cut(s) 1447
PsuI RGATCY 1 cut(s) 1822
PvuII CAGCTG 1 cut(s) 893
RsaI GTAC 3 cut(s) 27, 1055, 1894
RsaNI GTAC 3 cut(s) 26, 1054, 1893
RseI CAYNNNNRTG 2 cut(s) 473, 1728
SacI GAGCTC 1 cut(s) 242
SaqAI TTAA 3 cut(s) 54, 459, 929
SatI GCNGC 8 cut(s) 104, 209, 377, 684, 791, 891, 1154, 1446
Sau3AI GATC 9 cut(s) 169, 274, 421, 484, 703, 741, 862, 1129, 1822
Sau96I GGNCC 5 cut(s) 395, 625, 1000, 1048, 1797
SchI GAGTC 1 cut(s) 1235
ScrFI CCNGG 3 cut(s) 633, 1465, 1835
SduI GDGCHC 1 cut(s) 242
SexAI ACCWGGT 1 cut(s) 631
SfaNI GCATC 4 cut(s) 830, 844, 907, 1140
SfcI CTRYAG 2 cut(s) 399, 1443
SfuI TTCGAA 1 cut(s) 289
SinI GGWCC 4 cut(s) 395, 1000, 1048, 1797
SmiMI CAYNNNNRTG 2 cut(s) 473, 1728
SmlI CTYRAG 1 cut(s) 1313
SmoI CTYRAG 1 cut(s) 1313
SphI GCATGC 1 cut(s) 947
Sse9I AATT 3 cut(s) 164, 489, 1280
SsiI CCGC 5 cut(s) 62, 174, 652, 947, 1349
SspMI CTAG 4 cut(s) 1275, 1305, 1808, 1865
SstI GAGCTC 1 cut(s) 242
StyD4I CCNGG 3 cut(s) 631, 1463, 1833
StyI CCWWGG 4 cut(s) 508, 732, 1018, 1371
TaaI ACNGT 1 cut(s) 193
TaiI ACGT 2 cut(s) 319, 1677
TaqI TCGA 3 cut(s) 289, 433, 696
TasI AATT 3 cut(s) 164, 489, 1280
TfiI GAWTC 2 cut(s) 296, 1427
Tru1I TTAA 3 cut(s) 54, 459, 929
Tru9I TTAA 3 cut(s) 54, 459, 929
TscAI CASTG 5 cut(s) 48, 196, 286, 654, 733
TseFI GTSAC 2 cut(s) 176, 1459
TseI GCWGC 8 cut(s) 103, 208, 376, 683, 790, 890, 1153, 1445
Tsp45I GTSAC 2 cut(s) 176, 1459
TspDTI ATGAA 2 cut(s) 588, 1796
TspRI CASTG 5 cut(s) 48, 196, 286, 654, 733
VpaK11BI GGWCC 4 cut(s) 395, 1000, 1048, 1797
XapI RAATTY 1 cut(s) 1280
XbaI TCTAGA 1 cut(s) 1807
XceI RCATGY 3 cut(s) 446, 947, 1502
XcmI CCANNNNNNNNNTGG 1 cut(s) 1378
XmnI GAANNNNTTC 1 cut(s) 295
XspI CTAG 4 cut(s) 1275, 1305, 1808, 1865
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.