Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003595

Physical Location & Seq

Genomic Coordinates Reverse (-)

8037139 .. 8040152

Gene Structure 3014 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G22750.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1137 bp

ATGGAAACAAGAAACGAGACAAAAGCTTCACCGGAAAACAACCTCAGAAACAGAGGAGCTGATGGAAACAATAGCAAGAAAGACATGATTTTCCGAGCTGATAAGATTGATTTGAAGAATTTGGATATCCAGCTAGAGAAACATCTGAGTAGGGTTTGGTCAAGAAGCATTGAGAAGCACCCTAAGCCTAAGGAGGAATGGGAAATTGAATTGGCTAAATTAGAGATGAGGAATGTCATTGCTCGTGGTGCTTATGGTATTGTCTACAAAGGCATATATGATGGTCAAGATGTTGCTGTGAAAGTACTTGATTGGGGAGAAGATGGTTACGCGACAACGGCTGAGACATCTGCTCTACGTGCTTCATTTCGTCAAGAAGTTGCGGTTTGGCATAAGCTTGACCATCCTAATGTCACAAGGTTTGTGGGAGCATCAATGGGAACAGCGAATTTGAAGATACCTTCATCAGCTGAGACGGAGAACTCGTTGCCTCAACGAGCTTGTTGTGTCGTTGTGGAGTATATCCCTGGAGGAACTCTTAAGCAGTATTTGTTCCGAAACAGGCGAAAGAAACTCGCTTTTAAAGTCGTGGTTCAACTCGCTCTCGATCTCTCCCGAGGGTTAAGTTATTTGCATTCAGAGAGGATTGTTCATCGCGATGTGAAAACAGAGAATATGCTTTTGGATTATCAGAGGAATCTAAAGATTGCTGATTTTGGGGTTGCTAGAGTTGAAGCTCAGAATCCAAAAGACATGACTGGAGAAACTGGAACTCTTGGATACATGGCTCCAGAGGTTCTTGATGGCAAGCCATACAACAGAAGATGTGATGTTTACAGCTTTGGGATATGCTTGTGGGAGATTTATTGTTGTGATATGCCTTATCCTGATCTCAGCTTTGCTGATGTTTCTTCTGCTGTTGTTCGTCAGAATCTGAGACCGGATATTCCAAGATGTTGTCCAACAGCATTGGCGACCATAATGAAGAGATGTTGGGAAGCTAATCCGGAGAAACGACCAGAGATGGAGGAAGTTGTGAGTTTGCTTGAAGCTGTCGACACCACCAAAGGCGGTGGAATGATCCCGGAAGATCAGAGACCTGGCTGTTTCTGCTTTGTCTCTGGTCGTGGTCCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

378

Amino Acids

42.71

Weight (kDa)

7.93

Isoelectric Point (pI)

34.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PK_Tyr_Ser-Thr	PF07714	74 - 348	1.9e-58	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	78 - 346	1.6e-48	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003595)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22750 AT4G14780
fragaria_vesca	FvH4_2g23120 FvH4_2g23120 FvH4_4g00810 FvH4_4g00810 FvH4_4g00810
malus_domestica	MD03G1260300.v1.1 MD11G1280600.v1.1 MD13G1197700.v1.1 MD16G1197600.v1.1
prunus_persica	Prupe.1G019000_v2.0.a1 Prupe.8G236500_v2.0.a1
pyrus_communis	pycom11g24840 pycom13g17120 pycom16g16650
rosa_chinensis	RchiOBHm_Chr4g0387361 RchiOBHm_Chr6g0290371
rosa_laevigata	RLG00000010127 RLG00000012225
rosa_multiflora	Rmu_sc0000013.1_g000027 Rmu_ssc0000094.1_g000001
rosa_roxburghii	Rroxscaffold_5G00334090 Rroxscaffold_7G00177130
rosa_rugosa	Rorug03G0308900 Rorug06G0212000
rosa_samantha	Rh4BG010400 Rh4DG011300 Rh4DG011700 Rh6AG322300 Rh6BG329700 Rh6CG335700
rosa_wichuraiana	Rw4G000960 Rw6G027830 Rw6G027930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	2 cut(s)	264, 1056
AccII	CGCG	2 cut(s)	332, 657
AccIII	TCCGGA	1 cut(s)	1006
AciI	CCGC	2 cut(s)	383, 1071
AclWI	GGATC	1 cut(s)	1075
AcsI	RAATTY	2 cut(s)	118, 448
AfaI	GTAC	1 cut(s)	306
AflII	CTTAAG	1 cut(s)	539
AgsI	TTSAA	6 cut(s)	115, 209, 454, 596, 734, 1049
AjnI	CCWGG	2 cut(s)	526, 1099
AjuI	GAANNNNNNNTTGG	2 cut(s)	665, 697
Alw26I	GTCTC	6 cut(s)	11, 338, 467, 931, 1090, 1123
AlwI	GGATC	1 cut(s)	1075
AlwNI	CAGNNNCTG	1 cut(s)	934
Ama87I	CYCGRG	1 cut(s)	615
Aor13HI	TCCGGA	1 cut(s)	1006
ApoI	RAATTY	2 cut(s)	118, 448
AspS9I	GGNCC	1 cut(s)	1130
AsuC2I	CCSGG	1 cut(s)	1085
AsuHPI	GGTGA	1 cut(s)	21
AvaI	CYCGRG	1 cut(s)	615
AvaII	GGWCC	1 cut(s)	1130
AxyI	CCTNAGG	1 cut(s)	189
BauI	CACGAG	1 cut(s)	243
BccI	CCATC	6 cut(s)	56, 275, 317, 411, 797, 1018
BceAI	ACGGC	1 cut(s)	354
BciT130I	CCWGG	2 cut(s)	528, 1101
BciVI	GTATCC	1 cut(s)	773
BcnI	CCSGG	1 cut(s)	1085
BcoDI	GTCTC	6 cut(s)	11, 338, 467, 931, 1090, 1123
BfaI	CTAG	2 cut(s)	134, 726
BfrI	CTTAAG	1 cut(s)	539
BfuI	GTATCC	1 cut(s)	773
BmcAI	AGTACT	1 cut(s)	306
Bme1390I	CCNGG	3 cut(s)	528, 1085, 1101
Bme18I	GGWCC	1 cut(s)	1130
BmeT110I	CYCGRG	1 cut(s)	615
BmgT120I	GGNCC	1 cut(s)	1130
BmiI	GGNNCC	2 cut(s)	789, 1132
BmrFI	CCNGG	3 cut(s)	528, 1085, 1101
BmsI	GCATC	1 cut(s)	440
BpmI	CTGGAG	3 cut(s)	549, 774, 780
Bpu10I	CCTNAGC	1 cut(s)	183
BpuMI	CCSGG	1 cut(s)	1085
BsaAI	YACGTR	1 cut(s)	359
BsaI	GGTCTC	2 cut(s)	931, 1090
BsaJI	CCNNGG	2 cut(s)	526, 616
BsaWI	WCCGGW	3 cut(s)	31, 940, 1006
BsaXI	ACNNNNNCTCC	2 cut(s)	470, 500
Bse1I	ACTGG	2 cut(s)	763, 772
Bse21I	CCTNAGG	1 cut(s)	189
Bse3DI	GCAATG	1 cut(s)	237
BseAI	TCCGGA	1 cut(s)	1006
BseBI	CCWGG	2 cut(s)	528, 1101
BseDI	CCNNGG	2 cut(s)	526, 616
BseGI	GGATG	1 cut(s)	403
BseMI	GCAATG	1 cut(s)	237
BseMII	CTCAG	7 cut(s)	58, 137, 333, 462, 752, 907, 926
BseNI	ACTGG	2 cut(s)	763, 772
BseRI	GAGGAG	1 cut(s)	69
Bsh1236I	CGCG	2 cut(s)	332, 657
BsiHKCI	CYCGRG	1 cut(s)	615
BsiSI	CCGG	4 cut(s)	32, 941, 1007, 1085
BslFI	GGGAC	1 cut(s)	1116
BsmAI	GTCTC	6 cut(s)	11, 338, 467, 931, 1090, 1123
BsmBI	CGTCTC	1 cut(s)	467
BsmFI	GGGAC	1 cut(s)	1116
BsmI	GAATGC	1 cut(s)	634
Bso31I	GGTCTC	2 cut(s)	931, 1090
BsoBI	CYCGRG	1 cut(s)	615
Bsp13I	TCCGGA	1 cut(s)	1006
Bsp143I	GATC	4 cut(s)	607, 889, 1080, 1090
Bsp68I	TCGCGA	1 cut(s)	657
BspACI	CCGC	2 cut(s)	383, 1071
BspCNI	CTCAG	7 cut(s)	57, 138, 334, 463, 751, 906, 927
BspEI	TCCGGA	1 cut(s)	1006
BspFNI	CGCG	2 cut(s)	332, 657
BspLI	GGNNCC	2 cut(s)	789, 1132
BspPI	GGATC	1 cut(s)	1075
BspTI	CTTAAG	1 cut(s)	539
BspTNI	GGTCTC	2 cut(s)	931, 1090
BsrDI	GCAATG	1 cut(s)	237
BsrI	ACTGG	2 cut(s)	763, 772
BssECI	CCNNGG	2 cut(s)	526, 616
BssMI	GATC	4 cut(s)	607, 889, 1080, 1090
BssSI	CACGAG	1 cut(s)	243
Bst2BI	CACGAG	1 cut(s)	243
Bst2UI	CCWGG	2 cut(s)	528, 1101
Bst6I	CTCTTC	1 cut(s)	980
BstAFI	CTTAAG	1 cut(s)	539
BstBAI	YACGTR	1 cut(s)	359
BstC8I	GCNNGC	1 cut(s)	809
BstDEI	CTNAG	9 cut(s)	44, 146, 183, 189, 342, 471, 738, 893, 935
BstF5I	GGATG	1 cut(s)	403
BstFNI	CGCG	2 cut(s)	332, 657
BstKTI	GATC	4 cut(s)	610, 892, 1083, 1093
BstMAI	GTCTC	6 cut(s)	11, 338, 467, 931, 1090, 1123
BstMBI	GATC	4 cut(s)	607, 889, 1080, 1090
BstMWI	GCNNNNNNNGC	5 cut(s)	184, 248, 338, 359, 1110
BstNI	CCWGG	2 cut(s)	528, 1101
BstSCI	CCNGG	3 cut(s)	526, 1083, 1099
BstUI	CGCG	2 cut(s)	332, 657
Bsu36I	CCTNAGG	1 cut(s)	189
BsuI	GTATCC	1 cut(s)	773
BtgZI	GCGATG	2 cut(s)	638, 672
BtsCI	GGATG	1 cut(s)	403
BtuMI	TCGCGA	1 cut(s)	657
Cac8I	GCNNGC	1 cut(s)	809
CaiI	CAGNNNCTG	1 cut(s)	934
Cfr13I	GGNCC	1 cut(s)	1130
Csp6I	GTAC	1 cut(s)	305
CspCI	CAANNNNNGTGG	4 cut(s)	405, 440, 1054, 1089
CviAII	CATG	3 cut(s)	85, 754, 784
CviQI	GTAC	1 cut(s)	305
DdeI	CTNAG	9 cut(s)	44, 146, 183, 189, 342, 471, 738, 893, 935
DpnI	GATC	4 cut(s)	609, 891, 1082, 1092
DpnII	GATC	4 cut(s)	607, 889, 1080, 1090
DraI	TTTAAA	1 cut(s)	583
Eam1104I	CTCTTC	1 cut(s)	980
EarI	CTCTTC	1 cut(s)	980
Eco31I	GGTCTC	2 cut(s)	931, 1090
Eco32I	GATATC	1 cut(s)	127
Eco47I	GGWCC	1 cut(s)	1130
Eco81I	CCTNAGG	1 cut(s)	189
Eco88I	CYCGRG	1 cut(s)	615
EcoRII	CCWGG	2 cut(s)	526, 1099
EcoRV	GATATC	1 cut(s)	127
Esp3I	CGTCTC	1 cut(s)	467
FaeI	CATG	3 cut(s)	88, 757, 787
FaqI	GGGAC	1 cut(s)	1116
FatI	CATG	3 cut(s)	84, 753, 783
FblI	GTMKAC	2 cut(s)	264, 1056
FokI	GGATG	1 cut(s)	390
FspBI	CTAG	2 cut(s)	134, 726
GsuI	CTGGAG	3 cut(s)	549, 774, 780
HapII	CCGG	4 cut(s)	32, 941, 1007, 1085
Hin1II	CATG	3 cut(s)	88, 757, 787
HincII	GTYRAC	1 cut(s)	1057
HindII	GTYRAC	1 cut(s)	1057
HindIII	AAGCTT	2 cut(s)	24, 395
HinfI	GANTC	3 cut(s)	697, 742, 931
HpaII	CCGG	4 cut(s)	32, 941, 1007, 1085
HphI	GGTGA	1 cut(s)	21
Hpy166II	GTNNAC	3 cut(s)	265, 835, 1057
Hpy8I	GTNNAC	3 cut(s)	265, 835, 1057
HpyAV	CCTTC	1 cut(s)	471
HpyCH4IV	ACGT	1 cut(s)	358
HpyCH4V	TGCA	1 cut(s)	634
HpyF10VI	GCNNNNNNNGC	5 cut(s)	184, 248, 338, 359, 1110
HpyF3I	CTNAG	9 cut(s)	44, 146, 183, 189, 342, 471, 738, 893, 935
HpySE526I	ACGT	1 cut(s)	358
Hsp92II	CATG	3 cut(s)	88, 757, 787
Kpn2I	TCCGGA	1 cut(s)	1006
Kzo9I	GATC	4 cut(s)	607, 889, 1080, 1090
LmnI	GCTCC	3 cut(s)	56, 428, 793
LweI	GCATC	1 cut(s)	440
MaeI	CTAG	2 cut(s)	134, 726
MaeII	ACGT	1 cut(s)	358
MaeIII	GTNAC	2 cut(s)	326, 412
MalI	GATC	4 cut(s)	609, 891, 1082, 1092
MboI	GATC	4 cut(s)	607, 889, 1080, 1090
MboII	GAAGA	7 cut(s)	127, 332, 466, 834, 903, 997, 1100
MluCI	AATT	5 cut(s)	118, 204, 209, 218, 448
MmeI	TCCRAC	1 cut(s)	986
MroI	TCCGGA	1 cut(s)	1006
MseI	TTAA	3 cut(s)	540, 582, 623
MslI	CAYNNNNRTG	2 cut(s)	408, 657
MspA1I	CMGCKG	1 cut(s)	470
MspCI	CTTAAG	1 cut(s)	539
MspI	CCGG	4 cut(s)	32, 941, 1007, 1085
MspR9I	CCNGG	3 cut(s)	528, 1085, 1101
Mva1269I	GAATGC	1 cut(s)	634
MvaI	CCWGG	2 cut(s)	528, 1101
MvnI	CGCG	2 cut(s)	332, 657
MwoI	GCNNNNNNNGC	5 cut(s)	184, 248, 338, 359, 1110
NciI	CCSGG	1 cut(s)	1085
NdeII	GATC	4 cut(s)	607, 889, 1080, 1090
NlaIII	CATG	3 cut(s)	88, 757, 787
NlaIV	GGNNCC	2 cut(s)	789, 1132
NmuCI	GTSAC	1 cut(s)	412
NruI	TCGCGA	1 cut(s)	657
PcsI	WCGNNNNNNNCGW	1 cut(s)	482
PctI	GAATGC	1 cut(s)	634
PfeI	GAWTC	3 cut(s)	697, 742, 931
PfoI	TCCNGGA	1 cut(s)	1083
Ppu21I	YACGTR	1 cut(s)	359
Psp6I	CCWGG	2 cut(s)	526, 1099
PspGI	CCWGG	2 cut(s)	526, 1099
PspN4I	GGNNCC	2 cut(s)	789, 1132
PspPI	GGNCC	1 cut(s)	1130
PstNI	CAGNNNCTG	1 cut(s)	934
PvuII	CAGCTG	1 cut(s)	470
RruI	TCGCGA	1 cut(s)	657
RsaI	GTAC	1 cut(s)	306
RsaNI	GTAC	1 cut(s)	305
RseI	CAYNNNNRTG	2 cut(s)	408, 657
SalI	GTCGAC	1 cut(s)	1055
SaqAI	TTAA	3 cut(s)	540, 582, 623
Sau3AI	GATC	4 cut(s)	607, 889, 1080, 1090
Sau96I	GGNCC	1 cut(s)	1130
ScaI	AGTACT	1 cut(s)	306
ScrFI	CCNGG	3 cut(s)	528, 1085, 1101
SfaNI	GCATC	1 cut(s)	440
SinI	GGWCC	1 cut(s)	1130
SmiMI	CAYNNNNRTG	2 cut(s)	408, 657
SmlI	CTYRAG	1 cut(s)	539
SmoI	CTYRAG	1 cut(s)	539
Sse9I	AATT	5 cut(s)	118, 204, 209, 218, 448
SsiI	CCGC	2 cut(s)	383, 1071
SspMI	CTAG	2 cut(s)	134, 726
StyD4I	CCNGG	3 cut(s)	526, 1083, 1099
TaiI	ACGT	1 cut(s)	361
TaqI	TCGA	2 cut(s)	606, 1056
TasI	AATT	5 cut(s)	118, 204, 209, 218, 448
TatI	WGTACW	1 cut(s)	304
TfiI	GAWTC	3 cut(s)	697, 742, 931
Tru1I	TTAA	3 cut(s)	540, 582, 623
Tru9I	TTAA	3 cut(s)	540, 582, 623
TseFI	GTSAC	1 cut(s)	412
Tsp45I	GTSAC	1 cut(s)	412
TspDTI	ATGAA	4 cut(s)	354, 453, 641, 998
TspGWI	ACGGA	1 cut(s)	491
Vha464I	CTTAAG	1 cut(s)	539
VpaK11BI	GGWCC	1 cut(s)	1130
XapI	RAATTY	2 cut(s)	118, 448
XmiI	GTMKAC	2 cut(s)	264, 1056
XspI	CTAG	2 cut(s)	134, 726
ZrmI	AGTACT	1 cut(s)	306

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.