Prupe.1G019000_v2.0.a1

serine threonine-protein kinase HT1-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
1312930 .. 1318025
5096 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G019000.1

Sequence Viewer

Length: 1272 bp
ATGGATTCAAGGACAAGTGAGAATTTTGAAGGTGACATTGTATCAAAGCAGGTGGATCTCCAGCAAGGCGATATGAAGTTTAACATTAAGGGTACAGGTACAGGAAGTATTAGTTTCAAAGATATGGATCCAAAAATTAAGGGTACGGGAAGCATTAGTAACAAACAGATGGATCCGAAATTTAAGGGTGCAGGAAGTATTAGTGGCAAAGAGATGATCTTCAGAGCTGATAAAATTGATTTGAAGCACATAGATATACAGCTTGAGAAGCACTTGAGCAGGGTTTGGTCCAAGAACATTGAGAGAACCCGGCCTAAGGAAGAGTGGGAGATTGATTTATCTAAATTGGATATAAGATATGTTGTAGCTAGAGGGACCTATGGTATTGTATACAGGGGTACCTACGATGAACGAGACGTTGCAGTTAAGGTGTTGGACTGGGGGGAGGATGGTTATGCCACAGCTAATGACACTAATGCTGCGCGGGAATCATTTCAAAAAGAAGTTGCTGTCTGGCACAAGCTTGACCACCCTAATGTTACAAAGTTCATTGGAGCTTCAATGGGAACTTCAGATCTTAAGATTCCTTCAAAAAGCTCTTCAAGTGATGGTCTAGATTCTAATCCTGCAAGAGCATGTTGTGTTGTTGTGGAGTATCTCGCTGGTGGGACACTAAAGCAATACTTGATAAGAAACAGGCAAAAGAAACTTGCCTTTAAGGTTGTGATCCAACTTGCTTTGGACCTGGCTAGAGGTCTTAGCTATCTGCATTCTCAAAAAATTGTACACCGTGATGTCAAAACAGAAAATATGTTGCTTGATACTCGCAGAAACCTTAAAATAGCTGATTTTGGTGTCGCTCGTGTTGAAGCTCAGAATCCAAGGGACATGACTGGTGAAACTGGTACCCTTGGATACATGGCCCCAGAGGTTCTGGATGGTAAGCCTTATAATAGAAGATGCGATGTCTACAGCTTTGGCATATGCTTATGGGAAGTTTATTGCTGCGATATGCCTTACCCAGACCTTAGCTTTGCTGATGTGTCATCTGCAGTTGTCCGACAGAACTTACGGCCAGAAATCCCCAGATGCTGTCCGAGTTCTTTTTCAAACATCATGCGCAAGTGCTGGGACGCAAATGCAAATAAACGTCCTGAAATGGGTGAGGTGGTGAGAATGTTGGAAGCAATTGATACGAGTAAAGGAGGTGGGATGATACCTGAAGACCGTTCTCCGGGCTGTTTCTGTTTTGCCCCTACTCGTGGTCCCTGA

Protein Analysis

424

Amino Acids

47.39

Weight (kDa)

8.5

Isoelectric Point (pI)

31.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 951
AarI CACCTGC 1 cut(s) 40
Acc16I TGCGCA 1 cut(s) 1121
Acc36I ACCTGC 1 cut(s) 40
Acc65I GGTACC 2 cut(s) 398, 905
AccB1I GGYRCC 2 cut(s) 398, 905
AccI GTMKAC 2 cut(s) 390, 969
AccII CGCG 1 cut(s) 484
AciI CCGC 1 cut(s) 484
AclWI GGATC 6 cut(s) 63, 122, 135, 167, 180, 721
AcoI YGGCCR 1 cut(s) 1073
AcsI RAATTY 2 cut(s) 22, 179
AcuI CTGAAG 3 cut(s) 205, 555, 1242
AfaI GTAC 6 cut(s) 94, 100, 145, 400, 786, 907
AfiI CCNNNNNNNGG 4 cut(s) 316, 1160, 1234, 1262
AflII CTTAAG 1 cut(s) 578
AjnI CCWGG 1 cut(s) 744
Alw26I GTCTC 1 cut(s) 408
AlwI GGATC 6 cut(s) 63, 122, 135, 167, 180, 721
AlwNI CAGNNNCTG 1 cut(s) 1092
AoxI GGCC 3 cut(s) 311, 921, 1073
ApeKI GCWGC 2 cut(s) 479, 1005
ApoI RAATTY 2 cut(s) 22, 179
ArsI GACNNNNNNTTYG 2 cut(s) 1016, 1048
Asp700I GAANNNNTTC 1 cut(s) 492
Asp718I GGTACC 2 cut(s) 398, 905
AspLEI GCGC 2 cut(s) 484, 1122
AspS9I GGNCC 5 cut(s) 288, 375, 742, 922, 1265
AsuC2I CCSGG 2 cut(s) 310, 1236
AsuHPI GGTGA 4 cut(s) 44, 908, 1175, 1183
AvaII GGWCC 4 cut(s) 288, 375, 742, 1265
AxyI CCTNAGG 1 cut(s) 315
BaeI ACNNNNGTAYC 2 cut(s) 382, 415
BamHI GGATCC 2 cut(s) 127, 172
BanI GGYRCC 2 cut(s) 398, 905
BauI CACGAG 2 cut(s) 861, 1260
BbsI GAAGAC 1 cut(s) 1230
BbvI GCAGC 2 cut(s) 466, 992
BccI CCATC 4 cut(s) 163, 443, 602, 932
BceAI ACGGC 1 cut(s) 1088
BciT130I CCWGG 1 cut(s) 746
BciVI GTATCC 1 cut(s) 908
BcnI CCSGG 2 cut(s) 310, 1236
BcoDI GTCTC 1 cut(s) 408
BfaI CTAG 3 cut(s) 369, 614, 750
BfmI CTRYAG 2 cut(s) 970, 1050
BfrI CTTAAG 1 cut(s) 578
BfuAI ACCTGC 1 cut(s) 40
BfuI GTATCC 1 cut(s) 908
BglII AGATCT 1 cut(s) 574
BisI GCNGC 2 cut(s) 480, 1006
BlsI GCNGC 2 cut(s) 481, 1007
Bme1390I CCNGG 3 cut(s) 310, 746, 1236
Bme18I GGWCC 4 cut(s) 288, 375, 742, 1265
BmgT120I GGNCC 5 cut(s) 288, 375, 742, 922, 1265
BmiI GGNNCC 7 cut(s) 129, 174, 376, 400, 907, 924, 1267
BmrFI CCNGG 3 cut(s) 310, 746, 1236
BmrI ACTGGG 1 cut(s) 448
BmsI GCATC 2 cut(s) 950, 1079
BmuI ACTGGG 1 cut(s) 448
BpiI GAAGAC 1 cut(s) 1230
BpmI CTGGAG 1 cut(s) 44
Bpu10I CCTNAGC 1 cut(s) 1028
BpuEI CTTGAG 2 cut(s) 284, 295
BpuMI CCSGG 2 cut(s) 310, 1236
BsaBI GATNNNNATC 2 cut(s) 126, 621
BsaJI CCNNGG 2 cut(s) 881, 910
Bsc4I CCNNNNNNNGG 4 cut(s) 316, 1160, 1234, 1262
Bse1I ACTGG 3 cut(s) 443, 898, 907
Bse21I CCTNAGG 1 cut(s) 315
Bse8I GATNNNNATC 2 cut(s) 126, 621
BseBI CCWGG 1 cut(s) 746
BseDI CCNNGG 2 cut(s) 881, 910
BseGI GGATG 3 cut(s) 454, 943, 1218
BseJI GATNNNNATC 2 cut(s) 126, 621
BseLI CCNNNNNNNGG 4 cut(s) 316, 1160, 1234, 1262
BseMII CTCAG 1 cut(s) 887
BseNI ACTGG 3 cut(s) 443, 898, 907
BseXI GCAGC 2 cut(s) 466, 992
BseYI CCCAGC 1 cut(s) 1128
BsgI GTGCAG 1 cut(s) 210
Bsh1236I CGCG 1 cut(s) 484
BshFI GGCC 3 cut(s) 313, 923, 1075
BshNI GGYRCC 2 cut(s) 398, 905
BsiSI CCGG 2 cut(s) 310, 1235
BslFI GGGAC 5 cut(s) 388, 682, 899, 1145, 1251
BslI CCNNNNNNNGG 4 cut(s) 316, 1160, 1234, 1262
BsmAI GTCTC 1 cut(s) 408
BsmBI CGTCTC 1 cut(s) 408
BsmFI GGGAC 5 cut(s) 388, 682, 899, 1145, 1251
BsmI GAATGC 1 cut(s) 769
BsnI GGCC 3 cut(s) 313, 923, 1075
Bsp1407I TGTACA 1 cut(s) 784
Bsp143I GATC 6 cut(s) 55, 127, 172, 216, 574, 726
BspACI CCGC 1 cut(s) 484
BspANI GGCC 3 cut(s) 313, 923, 1075
BspCNI CTCAG 1 cut(s) 886
BspFNI CGCG 1 cut(s) 484
BspLI GGNNCC 7 cut(s) 129, 174, 376, 400, 907, 924, 1267
BspMAI CTGCAG 1 cut(s) 1054
BspMI ACCTGC 1 cut(s) 40
BspPI GGATC 6 cut(s) 63, 122, 135, 167, 180, 721
BspQI GCTCTTC 1 cut(s) 604
BspT107I GGYRCC 2 cut(s) 398, 905
BspTI CTTAAG 1 cut(s) 578
BsrGI TGTACA 1 cut(s) 784
BsrI ACTGG 3 cut(s) 443, 898, 907
BssECI CCNNGG 2 cut(s) 881, 910
BssMI GATC 6 cut(s) 55, 127, 172, 216, 574, 726
BssNAI GTATAC 1 cut(s) 391
BssSI CACGAG 2 cut(s) 861, 1260
BssT1I CCWWGG 2 cut(s) 881, 910
Bst1107I GTATAC 1 cut(s) 391
Bst2BI CACGAG 2 cut(s) 861, 1260
Bst2UI CCWGG 1 cut(s) 746
Bst4CI ACNGT 2 cut(s) 791, 1229
Bst6I CTCTTC 2 cut(s) 315, 604
BstAFI CTTAAG 1 cut(s) 578
BstAUI TGTACA 1 cut(s) 784
BstDEI CTNAG 4 cut(s) 315, 758, 873, 1028
BstF5I GGATG 3 cut(s) 454, 943, 1218
BstFNI CGCG 1 cut(s) 484
BstHHI GCGC 2 cut(s) 484, 1122
BstKTI GATC 6 cut(s) 58, 130, 175, 219, 577, 729
BstMAI GTCTC 1 cut(s) 408
BstMBI GATC 6 cut(s) 55, 127, 172, 216, 574, 726
BstMWI GCNNNNNNNGC 1 cut(s) 268
BstNI CCWGG 1 cut(s) 746
BstNSI RCATGY 1 cut(s) 639
BstSCI CCNGG 3 cut(s) 308, 744, 1234
BstSFI CTRYAG 2 cut(s) 970, 1050
BstUI CGCG 1 cut(s) 484
BstV1I GCAGC 2 cut(s) 466, 992
BstV2I GAAGAC 1 cut(s) 1230
BstX2I RGATCY 4 cut(s) 55, 127, 172, 574
BstYI RGATCY 4 cut(s) 55, 127, 172, 574
BstZ17I GTATAC 1 cut(s) 391
Bsu36I CCTNAGG 1 cut(s) 315
BsuI GTATCC 1 cut(s) 908
BsuRI GGCC 3 cut(s) 313, 923, 1075
BtgZI GCGATG 1 cut(s) 978
BtsCI GGATG 3 cut(s) 454, 943, 1218
BveI ACCTGC 1 cut(s) 40
CaiI CAGNNNCTG 1 cut(s) 1092
CfoI GCGC 2 cut(s) 484, 1122
Cfr13I GGNCC 5 cut(s) 288, 375, 742, 922, 1265
CseI GACGC 1 cut(s) 1142
Csp6I GTAC 6 cut(s) 93, 99, 144, 399, 785, 906
CspCI CAANNNNNGTGG 2 cut(s) 33, 68
CviAII CATG 4 cut(s) 636, 889, 919, 1117
CviQI GTAC 6 cut(s) 93, 99, 144, 399, 785, 906
DdeI CTNAG 4 cut(s) 315, 758, 873, 1028
DpnI GATC 6 cut(s) 57, 129, 174, 218, 576, 728
DpnII GATC 6 cut(s) 55, 127, 172, 216, 574, 726
EaeI YGGCCR 1 cut(s) 1073
Eam1104I CTCTTC 2 cut(s) 315, 604
EarI CTCTTC 2 cut(s) 315, 604
Eco130I CCWWGG 2 cut(s) 881, 910
Eco47I GGWCC 4 cut(s) 288, 375, 742, 1265
Eco57I CTGAAG 3 cut(s) 205, 555, 1242
Eco81I CCTNAGG 1 cut(s) 315
EcoO109I RGGNCCY 1 cut(s) 375
EcoRII CCWGG 1 cut(s) 744
EcoT14I CCWWGG 2 cut(s) 881, 910
ErhI CCWWGG 2 cut(s) 881, 910
Esp3I CGTCTC 1 cut(s) 408
FaeI CATG 4 cut(s) 639, 892, 922, 1120
FalI AAGNNNNNCTT 2 cut(s) 668, 700
FaqI GGGAC 5 cut(s) 388, 682, 899, 1145, 1251
FatI CATG 4 cut(s) 635, 888, 918, 1116
FauI CCCGC 1 cut(s) 477
FauNDI CATATG 1 cut(s) 983
FblI GTMKAC 2 cut(s) 390, 969
Fnu4HI GCNGC 2 cut(s) 480, 1006
FokI GGATG 3 cut(s) 461, 950, 1225
Fsp4HI GCNGC 2 cut(s) 480, 1006
FspBI CTAG 3 cut(s) 369, 614, 750
FspI TGCGCA 1 cut(s) 1121
GlaI GCGC 2 cut(s) 483, 1121
GluI GCNGC 2 cut(s) 480, 1006
GsaI CCCAGC 1 cut(s) 1132
GsuI CTGGAG 1 cut(s) 44
HaeIII GGCC 3 cut(s) 313, 923, 1075
HapII CCGG 2 cut(s) 310, 1235
HgaI GACGC 1 cut(s) 1142
HhaI GCGC 2 cut(s) 484, 1122
Hin1II CATG 4 cut(s) 639, 892, 922, 1120
Hin6I GCGC 2 cut(s) 482, 1120
HinP1I GCGC 2 cut(s) 482, 1120
HindIII AAGCTT 1 cut(s) 521
HinfI GANTC 5 cut(s) 5, 488, 583, 617, 877
HpaII CCGG 2 cut(s) 310, 1235
HphI GGTGA 4 cut(s) 44, 908, 1175, 1183
Hpy166II GTNNAC 3 cut(s) 391, 787, 970
Hpy188I TCNGA 6 cut(s) 177, 224, 574, 876, 1061, 1098
Hpy188III TCNNGA 3 cut(s) 614, 935, 1154
Hpy8I GTNNAC 3 cut(s) 391, 787, 970
HpyAV CCTTC 2 cut(s) 23, 597
HpyCH4III ACNGT 2 cut(s) 791, 1229
HpyCH4IV ACGT 2 cut(s) 417, 1150
HpyCH4V TGCA 6 cut(s) 191, 422, 629, 769, 1052, 1142
HpyF10VI GCNNNNNNNGC 1 cut(s) 268
HpyF3I CTNAG 4 cut(s) 315, 758, 873, 1028
HpySE526I ACGT 2 cut(s) 417, 1150
Hsp92II CATG 4 cut(s) 639, 892, 922, 1120
HspAI GCGC 2 cut(s) 482, 1120
KpnI GGTACC 2 cut(s) 402, 909
Kzo9I GATC 6 cut(s) 55, 127, 172, 216, 574, 726
LguI GCTCTTC 1 cut(s) 604
LmnI GCTCC 1 cut(s) 554
Lsp1109I GCAGC 2 cut(s) 466, 992
LweI GCATC 2 cut(s) 950, 1079
MaeI CTAG 3 cut(s) 369, 614, 750
MaeII ACGT 2 cut(s) 417, 1150
MaeIII GTNAC 3 cut(s) 32, 158, 538
MalI GATC 6 cut(s) 57, 129, 174, 218, 576, 728
MboI GATC 6 cut(s) 55, 127, 172, 216, 574, 726
MboII GAAGA 5 cut(s) 211, 332, 591, 969, 1235
MfeI CAATTG 1 cut(s) 1188
MflI RGATCY 4 cut(s) 55, 127, 172, 574
MluCI AATT 7 cut(s) 22, 135, 179, 234, 344, 780, 1188
MmeI TCCRAC 4 cut(s) 414, 754, 1084, 1161
MnlI CCTC 6 cut(s) 365, 439, 746, 922, 1159, 1199
MroXI GAANNNNTTC 1 cut(s) 492
MseI TTAA 8 cut(s) 81, 87, 138, 183, 426, 579, 717, 837
MslI CAYNNNNRTG 2 cut(s) 534, 792
MspCI CTTAAG 1 cut(s) 578
MspI CCGG 2 cut(s) 310, 1235
MspR9I CCNGG 3 cut(s) 310, 746, 1236
MunI CAATTG 1 cut(s) 1188
Mva1269I GAATGC 1 cut(s) 769
MvaI CCWGG 1 cut(s) 746
MvnI CGCG 1 cut(s) 484
MwoI GCNNNNNNNGC 1 cut(s) 268
NciI CCSGG 2 cut(s) 310, 1236
NdeI CATATG 1 cut(s) 983
NdeII GATC 6 cut(s) 55, 127, 172, 216, 574, 726
NlaIII CATG 4 cut(s) 639, 892, 922, 1120
NlaIV GGNNCC 7 cut(s) 129, 174, 376, 400, 907, 924, 1267
NmuCI GTSAC 1 cut(s) 32
NsbI TGCGCA 1 cut(s) 1121
NspI RCATGY 1 cut(s) 639
PaqCI CACCTGC 1 cut(s) 40
PciSI GCTCTTC 1 cut(s) 604
PctI GAATGC 1 cut(s) 769
PdmI GAANNNNTTC 1 cut(s) 492
PfeI GAWTC 5 cut(s) 5, 488, 583, 617, 877
PkrI GCNGC 2 cut(s) 481, 1007
PpuMI RGGWCCY 1 cut(s) 375
PsiI TTATAA 1 cut(s) 951
Psp5II RGGWCCY 1 cut(s) 375
Psp6I CCWGG 1 cut(s) 744
PspFI CCCAGC 1 cut(s) 1128
PspGI CCWGG 1 cut(s) 744
PspN4I GGNNCC 7 cut(s) 129, 174, 376, 400, 907, 924, 1267
PspPI GGNCC 5 cut(s) 288, 375, 742, 922, 1265
PspPPI RGGWCCY 1 cut(s) 375
PstI CTGCAG 1 cut(s) 1054
PstNI CAGNNNCTG 1 cut(s) 1092
PsuI RGATCY 4 cut(s) 55, 127, 172, 574
RsaI GTAC 6 cut(s) 94, 100, 145, 400, 786, 907
RsaNI GTAC 6 cut(s) 93, 99, 144, 399, 785, 906
RseI CAYNNNNRTG 2 cut(s) 534, 792
SapI GCTCTTC 1 cut(s) 604
SaqAI TTAA 8 cut(s) 81, 87, 138, 183, 426, 579, 717, 837
SatI GCNGC 2 cut(s) 480, 1006
Sau3AI GATC 6 cut(s) 55, 127, 172, 216, 574, 726
Sau96I GGNCC 5 cut(s) 288, 375, 742, 922, 1265
ScrFI CCNGG 3 cut(s) 310, 746, 1236
SfaNI GCATC 2 cut(s) 950, 1079
SfcI CTRYAG 2 cut(s) 970, 1050
SinI GGWCC 4 cut(s) 288, 375, 742, 1265
SmiMI CAYNNNNRTG 2 cut(s) 534, 792
SmlI CTYRAG 3 cut(s) 263, 274, 578
SmoI CTYRAG 3 cut(s) 263, 274, 578
Sse9I AATT 7 cut(s) 22, 135, 179, 234, 344, 780, 1188
SsiI CCGC 1 cut(s) 484
SspMI CTAG 3 cut(s) 369, 614, 750
StyD4I CCNGG 3 cut(s) 308, 744, 1234
StyI CCWWGG 2 cut(s) 881, 910
TaaI ACNGT 2 cut(s) 791, 1229
TaiI ACGT 2 cut(s) 420, 1153
TasI AATT 7 cut(s) 22, 135, 179, 234, 344, 780, 1188
TatI WGTACW 1 cut(s) 784
TfiI GAWTC 5 cut(s) 5, 488, 583, 617, 877
Tru1I TTAA 8 cut(s) 81, 87, 138, 183, 426, 579, 717, 837
Tru9I TTAA 8 cut(s) 81, 87, 138, 183, 426, 579, 717, 837
TseFI GTSAC 1 cut(s) 32
TseI GCWGC 2 cut(s) 479, 1005
Tsp45I GTSAC 1 cut(s) 32
TspDTI ATGAA 3 cut(s) 89, 423, 538
Vha464I CTTAAG 1 cut(s) 578
VpaK11BI GGWCC 4 cut(s) 288, 375, 742, 1265
XapI RAATTY 2 cut(s) 22, 179
XbaI TCTAGA 1 cut(s) 613
XceI RCATGY 1 cut(s) 639
XmiI GTMKAC 2 cut(s) 390, 969
XmnI GAANNNNTTC 1 cut(s) 492
XspI CTAG 3 cut(s) 369, 614, 750
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.