Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0003595

Physical Location & Seq

Genomic Coordinates Forward (+)

20910253 .. 20912873

Gene Structure 2621 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G236500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1158 bp

ATGGATTCAAGAAATGGTACTGAGGGAGTTGAAAAGTCTAGCACCGAAGAGACGGCCTTTGGCTCAAAGGGGAAGGTTGTGGGAGGTACTGAGCAAGAAGTGTTTTTCCGAGCAGATAAGATTGATTTTAAGAGCTGGGATATCCAGTTAGAGAAGCACTTGAGCAGGGGCTGGGCAAGGGAGAGTGAAGAACACAAGCAGATGGAAGAGTGGGAGATTGATTTGTCTAAATTGGATATAAGACATGTCATTGCTCATGGAACTTATGGTACTGTCTACCGTGGTGCCTATGACGGCCAAGATGTTGCAGTGAAAATATTGGATTGGGGGGAGGATGGTATTGCCACAGCAGCTGAAACTGCTGCTCTTCGGGCGTCGTTTCAGCAAGAAGTTGCTGTTTGGCATAAGCTTGACCATCCAAATATTCCGAAGTTTGTCGGAGCTTCAATGGGAACTTCCAATCTTAGAATCCCTACTAAAAGCACATCAAATGATAGTCATAATTCTCCTCCTTCCAGAGCTTGTTGCGTTGTTGTTGAGTATGTTCCAGGTGGGACGCTAAAGAACTTTTTGATCAGGAATAGAAGAAAGAAACTTGCCTTTAAGGTTGTGATTCAACTTGCTCTGGATCTCTCTAAAGGTTTGAGTTATCTTCACTCAAAGAAAATTGTACACCGTGATGTCAAGACAGAAAATATGTTGCTAGATACTCATAGAACTTTGAAAATTGCTGATTTTGGCGTTGCTCGAGTAGAAGCTCAAAATCCAAGGGACATGACCGGAGAGACTGGTACCCTTGGGTACATGGCCCCAGAGGTCCTTGATGGCAAGCCTTACAACAGGAAATGTGACGTCTACAGTTTTGGTATTTGCTTATGGGAAATCTATTGCTGCGACATGCCTTATCCTAATCTAAGTTTTGCTGATGTCTCATCTGCAGTAGTGCGACAGAACTTACGACCAGAAATCCCAAGATGTTGCCCGACTGCATTGGCTAGCGTCATGCGAAAATGTTGGGATGTGAGCCCAGATAAACGCCCTGAGATGGAAGAGGTAGTGAAGCTGTTGTATGCCATAGACACAAGCAAAGGAGGTGGCATGATACCTGAAGACCAGTCTACTGGCTGTTTCTGCTTCGGCAAACGTCGTGGCCCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

386

Amino Acids

43.05

Weight (kDa)

7.12

Isoelectric Point (pI)

38.22

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003595)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22750 AT4G14780
fragaria_vesca	FvH4_2g23120 FvH4_2g23120 FvH4_4g00810 FvH4_4g00810 FvH4_4g00810
malus_domestica	MD03G1260300.v1.1 MD11G1280600.v1.1 MD13G1197700.v1.1 MD16G1197600.v1.1
prunus_persica	Prupe.1G019000_v2.0.a1 Prupe.8G236500_v2.0.a1
pyrus_communis	pycom11g24840 pycom13g17120 pycom16g16650
rosa_chinensis	RchiOBHm_Chr4g0387361 RchiOBHm_Chr6g0290371
rosa_laevigata	RLG00000010127 RLG00000012225
rosa_multiflora	Rmu_sc0000013.1_g000027 Rmu_ssc0000094.1_g000001
rosa_roxburghii	Rroxscaffold_5G00334090 Rroxscaffold_7G00177130
rosa_rugosa	Rorug03G0308900 Rorug06G0212000
rosa_samantha	Rh4BG010400 Rh4DG011300 Rh4DG011700 Rh6AG322300 Rh6BG329700 Rh6CG335700
rosa_wichuraiana	Rw4G000960 Rw6G027830 Rw6G027930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	855
Acc65I	GGTACC	1 cut(s)	791
AccB1I	GGYRCC	2 cut(s)	284, 791
AccI	GTMKAC	3 cut(s)	276, 855, 1118
AclWI	GGATC	1 cut(s)	636
AcoI	YGGCCR	1 cut(s)	295
AcuI	CTGAAG	1 cut(s)	1128
AcyI	GRCGYC	2 cut(s)	374, 852
AfaI	GTAC	6 cut(s)	19, 88, 271, 672, 793, 803
AfiI	CCNNNNNNNGG	1 cut(s)	1045
AflIII	ACRYGT	1 cut(s)	244
AgsI	TTSAA	5 cut(s)	9, 32, 447, 617, 724
AjnI	CCWGG	1 cut(s)	547
AluBI	AGCT	7 cut(s)	135, 353, 409, 443, 521, 758, 1063
AluI	AGCT	7 cut(s)	135, 353, 409, 443, 521, 758, 1063
Alw26I	GTCTC	3 cut(s)	44, 779, 934
AlwI	GGATC	1 cut(s)	636
AlwNI	CAGNNNCTG	2 cut(s)	171, 353
Ama87I	CYCGRG	1 cut(s)	747
AoxI	GGCC	4 cut(s)	54, 295, 807, 1150
ApeKI	GCWGC	3 cut(s)	350, 362, 891
Asp718I	GGTACC	1 cut(s)	791
AspS9I	GGNCC	3 cut(s)	808, 817, 1151
AsuNHI	GCTAGC	1 cut(s)	995
AvaI	CYCGRG	1 cut(s)	747
AvaII	GGWCC	1 cut(s)	817
BanI	GGYRCC	2 cut(s)	284, 791
BanII	GRGCYC	1 cut(s)	1028
BbsI	GAAGAC	1 cut(s)	1116
BbvI	GCAGC	3 cut(s)	349, 362, 878
BccI	CCATC	5 cut(s)	196, 329, 423, 818, 1039
BceAI	ACGGC	2 cut(s)	69, 310
BciT130I	CCWGG	1 cut(s)	549
BclI	TGATCA	1 cut(s)	573
BcoDI	GTCTC	3 cut(s)	44, 779, 934
BfaI	CTAG	3 cut(s)	39, 704, 996
BfmI	CTRYAG	2 cut(s)	856, 936
BisI	GCNGC	3 cut(s)	351, 363, 892
BlsI	GCNGC	3 cut(s)	352, 364, 893
Bme1390I	CCNGG	1 cut(s)	549
Bme18I	GGWCC	1 cut(s)	817
BmeT110I	CYCGRG	1 cut(s)	747
BmgT120I	GGNCC	3 cut(s)	808, 817, 1151
BmiI	GGNNCC	4 cut(s)	286, 793, 810, 1153
BmrFI	CCNGG	1 cut(s)	549
BmtI	GCTAGC	1 cut(s)	999
BpiI	GAAGAC	1 cut(s)	1116
BpuEI	CTTGAG	1 cut(s)	181
BsaHI	GRCGYC	2 cut(s)	374, 852
BsaJI	CCNNGG	3 cut(s)	280, 767, 796
BsaWI	WCCGGW	1 cut(s)	779
Bsc4I	CCNNNNNNNGG	1 cut(s)	1045
Bse1I	ACTGG	4 cut(s)	145, 793, 1114, 1126
Bse3DI	GCAATG	1 cut(s)	249
BseBI	CCWGG	1 cut(s)	549
BseDI	CCNNGG	3 cut(s)	280, 767, 796
BseGI	GGATG	3 cut(s)	340, 415, 1024
BseLI	CCNNNNNNNGG	1 cut(s)	1045
BseMI	GCAATG	1 cut(s)	249
BseMII	CTCAG	3 cut(s)	12, 81, 1032
BseNI	ACTGG	4 cut(s)	145, 793, 1114, 1126
BseRI	GAGGAG	1 cut(s)	498
BseXI	GCAGC	3 cut(s)	349, 362, 878
BseYI	CCCAGC	2 cut(s)	135, 171
BshFI	GGCC	4 cut(s)	56, 297, 809, 1152
BshNI	GGYRCC	2 cut(s)	284, 791
BsiHKCI	CYCGRG	1 cut(s)	747
BsiSI	CCGG	1 cut(s)	780
BslFI	GGGAC	2 cut(s)	568, 785
BslI	CCNNNNNNNGG	1 cut(s)	1045
BsmAI	GTCTC	3 cut(s)	44, 779, 934
BsmBI	CGTCTC	1 cut(s)	44
BsmFI	GGGAC	2 cut(s)	568, 785
BsnI	GGCC	4 cut(s)	56, 297, 809, 1152
BsoBI	CYCGRG	1 cut(s)	747
Bsp1286I	GDGCHC	1 cut(s)	1028
Bsp1407I	TGTACA	1 cut(s)	670
Bsp143I	GATC	2 cut(s)	573, 628
BspANI	GGCC	4 cut(s)	56, 297, 809, 1152
BspCNI	CTCAG	3 cut(s)	13, 82, 1033
BspLI	GGNNCC	4 cut(s)	286, 793, 810, 1153
BspMAI	CTGCAG	1 cut(s)	940
BspOI	GCTAGC	1 cut(s)	999
BspPI	GGATC	1 cut(s)	636
BspQI	GCTCTTC	1 cut(s)	372
BspT107I	GGYRCC	2 cut(s)	284, 791
BsrDI	GCAATG	1 cut(s)	249
BsrGI	TGTACA	1 cut(s)	670
BsrI	ACTGG	4 cut(s)	145, 793, 1114, 1126
BssECI	CCNNGG	3 cut(s)	280, 767, 796
BssMI	GATC	2 cut(s)	573, 628
BssNI	GRCGYC	2 cut(s)	374, 852
BssT1I	CCWWGG	2 cut(s)	767, 796
Bst2UI	CCWGG	1 cut(s)	549
Bst4CI	ACNGT	4 cut(s)	274, 281, 677, 860
Bst6I	CTCTTC	4 cut(s)	42, 201, 372, 1044
BstACI	GRCGYC	2 cut(s)	374, 852
BstAUI	TGTACA	1 cut(s)	670
BstC8I	GCNNGC	2 cut(s)	830, 997
BstDEI	CTNAG	5 cut(s)	21, 90, 464, 914, 1041
BstDSI	CCRYGG	1 cut(s)	280
BstF5I	GGATG	3 cut(s)	340, 415, 1024
BstKTI	GATC	2 cut(s)	576, 631
BstMAI	GTCTC	3 cut(s)	44, 779, 934
BstMBI	GATC	2 cut(s)	573, 628
BstMWI	GCNNNNNNNGC	4 cut(s)	350, 359, 371, 1131
BstNI	CCWGG	1 cut(s)	549
BstNSI	RCATGY	2 cut(s)	248, 901
BstSCI	CCNGG	1 cut(s)	547
BstSFI	CTRYAG	2 cut(s)	856, 936
BstV1I	GCAGC	3 cut(s)	349, 362, 878
BstV2I	GAAGAC	1 cut(s)	1116
BstX2I	RGATCY	1 cut(s)	628
BstXI	CCANNNNNNTGG	1 cut(s)	1121
BstYI	RGATCY	1 cut(s)	628
BsuRI	GGCC	4 cut(s)	56, 297, 809, 1152
BtgI	CCRYGG	1 cut(s)	280
BtsCI	GGATG	3 cut(s)	340, 415, 1024
BtsI	GCAGTG	1 cut(s)	315
BtsIMutI	CAGTG	1 cut(s)	315
Cac8I	GCNNGC	2 cut(s)	830, 997
CaiI	CAGNNNCTG	2 cut(s)	171, 353
Cfr13I	GGNCC	3 cut(s)	808, 817, 1151
CseI	GACGC	3 cut(s)	363, 565, 988
Csp6I	GTAC	6 cut(s)	18, 87, 270, 671, 792, 802
CspCI	CAANNNNNGTGG	3 cut(s)	1075, 1110, 1129
CviAII	CATG	7 cut(s)	245, 257, 775, 805, 898, 1003, 1099
CviQI	GTAC	6 cut(s)	18, 87, 270, 671, 792, 802
DdeI	CTNAG	5 cut(s)	21, 90, 464, 914, 1041
DpnI	GATC	2 cut(s)	575, 630
DpnII	GATC	2 cut(s)	573, 628
EaeI	YGGCCR	1 cut(s)	295
Eam1104I	CTCTTC	4 cut(s)	42, 201, 372, 1044
EarI	CTCTTC	4 cut(s)	42, 201, 372, 1044
Eco130I	CCWWGG	2 cut(s)	767, 796
Eco24I	GRGCYC	1 cut(s)	1028
Eco32I	GATATC	1 cut(s)	142
Eco47I	GGWCC	1 cut(s)	817
Eco57I	CTGAAG	1 cut(s)	1128
Eco88I	CYCGRG	1 cut(s)	747
EcoO109I	RGGNCCY	1 cut(s)	817
EcoRII	CCWGG	1 cut(s)	547
EcoRV	GATATC	1 cut(s)	142
EcoT14I	CCWWGG	2 cut(s)	767, 796
EcoT38I	GRGCYC	1 cut(s)	1028
ErhI	CCWWGG	2 cut(s)	767, 796
Esp3I	CGTCTC	1 cut(s)	44
FaeI	CATG	7 cut(s)	248, 260, 778, 808, 901, 1006, 1102
FaqI	GGGAC	2 cut(s)	568, 785
FatI	CATG	7 cut(s)	244, 256, 774, 804, 897, 1002, 1098
FbaI	TGATCA	1 cut(s)	573
FblI	GTMKAC	3 cut(s)	276, 855, 1118
Fnu4HI	GCNGC	3 cut(s)	351, 363, 892
FokI	GGATG	3 cut(s)	347, 402, 1031
FriOI	GRGCYC	1 cut(s)	1028
Fsp4HI	GCNGC	3 cut(s)	351, 363, 892
FspBI	CTAG	3 cut(s)	39, 704, 996
GluI	GCNGC	3 cut(s)	351, 363, 892
GsaI	CCCAGC	2 cut(s)	139, 175
HaeIII	GGCC	4 cut(s)	56, 297, 809, 1152
HapII	CCGG	1 cut(s)	780
HgaI	GACGC	3 cut(s)	363, 565, 988
Hin1I	GRCGYC	2 cut(s)	374, 852
Hin1II	CATG	7 cut(s)	248, 260, 778, 808, 901, 1006, 1102
HindIII	AAGCTT	1 cut(s)	407
HinfI	GANTC	3 cut(s)	5, 468, 613
HpaII	CCGG	1 cut(s)	780
Hpy166II	GTNNAC	4 cut(s)	277, 673, 856, 1119
Hpy188I	TCNGA	3 cut(s)	110, 429, 440
Hpy188III	TCNNGA	5 cut(s)	9, 516, 577, 626, 685
Hpy8I	GTNNAC	4 cut(s)	277, 673, 856, 1119
Hpy99I	CGWCG	2 cut(s)	379, 1149
HpyAV	CCTTC	2 cut(s)	67, 522
HpyCH4III	ACNGT	4 cut(s)	274, 281, 677, 860
HpyCH4IV	ACGT	2 cut(s)	852, 1144
HpyCH4V	TGCA	3 cut(s)	308, 938, 989
HpyF10VI	GCNNNNNNNGC	4 cut(s)	350, 359, 371, 1131
HpyF3I	CTNAG	5 cut(s)	21, 90, 464, 914, 1041
HpySE526I	ACGT	2 cut(s)	852, 1144
Hsp92I	GRCGYC	2 cut(s)	374, 852
Hsp92II	CATG	7 cut(s)	248, 260, 778, 808, 901, 1006, 1102
KpnI	GGTACC	1 cut(s)	795
Ksp22I	TGATCA	1 cut(s)	573
Kzo9I	GATC	2 cut(s)	573, 628
LguI	GCTCTTC	1 cut(s)	372
LmnI	GCTCC	1 cut(s)	440
Lsp1109I	GCAGC	3 cut(s)	349, 362, 878
MaeI	CTAG	3 cut(s)	39, 704, 996
MaeII	ACGT	2 cut(s)	852, 1144
MaeIII	GTNAC	1 cut(s)	848
MalI	GATC	2 cut(s)	575, 630
MboI	GATC	2 cut(s)	573, 628
MboII	GAAGA	8 cut(s)	59, 200, 218, 359, 597, 644, 1061, 1121
MflI	RGATCY	1 cut(s)	628
MhlI	GDGCHC	1 cut(s)	1028
MluCI	AATT	4 cut(s)	230, 502, 666, 726
MmeI	TCCRAC	1 cut(s)	418
MnlI	CCTC	7 cut(s)	16, 77, 325, 519, 808, 1045, 1085
MseI	TTAA	2 cut(s)	129, 603
MslI	CAYNNNNRTG	1 cut(s)	678
MspA1I	CMGCKG	1 cut(s)	353
MspI	CCGG	1 cut(s)	780
MspR9I	CCNGG	1 cut(s)	549
MvaI	CCWGG	1 cut(s)	549
MwoI	GCNNNNNNNGC	4 cut(s)	350, 359, 371, 1131
NdeII	GATC	2 cut(s)	573, 628
NheI	GCTAGC	1 cut(s)	995
NlaIII	CATG	7 cut(s)	248, 260, 778, 808, 901, 1006, 1102
NlaIV	GGNNCC	4 cut(s)	286, 793, 810, 1153
NmuCI	GTSAC	1 cut(s)	848
NspI	RCATGY	2 cut(s)	248, 901
PaeR7I	CTCGAG	1 cut(s)	747
PciI	ACATGT	1 cut(s)	244
PciSI	GCTCTTC	1 cut(s)	372
PfeI	GAWTC	3 cut(s)	5, 468, 613
PkrI	GCNGC	3 cut(s)	352, 364, 893
PpuMI	RGGWCCY	1 cut(s)	817
PscI	ACATGT	1 cut(s)	244
Psp5II	RGGWCCY	1 cut(s)	817
Psp6I	CCWGG	1 cut(s)	547
PspFI	CCCAGC	2 cut(s)	135, 171
PspGI	CCWGG	1 cut(s)	547
PspN4I	GGNNCC	4 cut(s)	286, 793, 810, 1153
PspPI	GGNCC	3 cut(s)	808, 817, 1151
PspPPI	RGGWCCY	1 cut(s)	817
PspXI	VCTCGAGB	1 cut(s)	747
PsrI	GAACNNNNNNTAC	2 cut(s)	253, 285
PstI	CTGCAG	1 cut(s)	940
PstNI	CAGNNNCTG	2 cut(s)	171, 353
PsuI	RGATCY	1 cut(s)	628
PvuII	CAGCTG	1 cut(s)	353
RsaI	GTAC	6 cut(s)	19, 88, 271, 672, 793, 803
RsaNI	GTAC	6 cut(s)	18, 87, 270, 671, 792, 802
RseI	CAYNNNNRTG	1 cut(s)	678
SapI	GCTCTTC	1 cut(s)	372
SaqAI	TTAA	2 cut(s)	129, 603
SatI	GCNGC	3 cut(s)	351, 363, 892
Sau3AI	GATC	2 cut(s)	573, 628
Sau96I	GGNCC	3 cut(s)	808, 817, 1151
ScrFI	CCNGG	1 cut(s)	549
SduI	GDGCHC	1 cut(s)	1028
SfcI	CTRYAG	2 cut(s)	856, 936
Sfr274I	CTCGAG	1 cut(s)	747
SinI	GGWCC	1 cut(s)	817
SlaI	CTCGAG	1 cut(s)	747
SmiMI	CAYNNNNRTG	1 cut(s)	678
SmlI	CTYRAG	2 cut(s)	160, 747
SmoI	CTYRAG	2 cut(s)	160, 747
Sse9I	AATT	4 cut(s)	230, 502, 666, 726
SspI	AATATT	2 cut(s)	318, 424
SspMI	CTAG	3 cut(s)	39, 704, 996
StyD4I	CCNGG	1 cut(s)	547
StyI	CCWWGG	2 cut(s)	767, 796
TaaI	ACNGT	4 cut(s)	274, 281, 677, 860
TaiI	ACGT	2 cut(s)	855, 1147
TaqI	TCGA	1 cut(s)	748
TasI	AATT	4 cut(s)	230, 502, 666, 726
TatI	WGTACW	1 cut(s)	670
TfiI	GAWTC	3 cut(s)	5, 468, 613
Tru1I	TTAA	2 cut(s)	129, 603
Tru9I	TTAA	2 cut(s)	129, 603
TscAI	CASTG	1 cut(s)	315
TseFI	GTSAC	1 cut(s)	848
TseI	GCWGC	3 cut(s)	350, 362, 891
Tsp45I	GTSAC	1 cut(s)	848
TspRI	CASTG	1 cut(s)	315
VpaK11BI	GGWCC	1 cut(s)	817
XceI	RCATGY	2 cut(s)	248, 901
XhoI	CTCGAG	1 cut(s)	747
XmiI	GTMKAC	3 cut(s)	276, 855, 1118
XspI	CTAG	3 cut(s)	39, 704, 996
ZraI	GACGTC	1 cut(s)	853

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.