pycom13g17120

serine threonine-protein kinase HT1-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Reverse (-)
12849772 .. 12854601
4830 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g17120.3

Sequence Viewer

Length: 1221 bp
ATGGATTCAAGGACAAGTGAGAATGTTGAAGTTGCAGATGTACCAAACATGGTGGATCACCAGAAAGGTAATATGAATTCAAAACTTAGGAGTGCAGGGAGTATGAGTTTCAAAGAGGTGGAACCAAAAATTAATGGCACAGGAAGTATTAGTAGCAAAGAGATGATCTTCCGAGCAGATAAAATCGATTTGAAGAACTTAGATATACAGCTTGAGAAACATTTGAGCCGGGTTTGGTCTAGAAACATTGAGAGTACCAGGCCTAAGGAAGAATGGGAGATTGATTTAGCTAAATTGGAAATAAGATATATTGTAGCTCGAGGGACCTATGGTACCGTATTCAGGGGCACCTATGATGATCAAGATGTTGCAGTGAAGCTGTTGGACTGGGGGGAGGATGGCTATGCCACAGGTGCTGAAACTGCTGCTCTGCGGGCATCATTTCAAAAAGAAGTTGCTGTCTGGCACAAGCTTGACCATCCTAATGTTACCAAATTCATTGGAGCTTCAATGGGAACTTCAGATCTTAAAATTCCTACAAAAGGCTCTTCAAGTGATGGTGTAGATTCACATCCTGCTAGAGCGTGTTGTGTTGTTGTGGAATATCTCGCTGGTGGGACACTAAAGCAATTCTTGATAAGAAACAGGCAAAAGAAACTTGCCTTTAAGGTTGTGATCCAACTTGCTTTGGACCTCTCTAGAGGTCTTGGCTATCTGCATTCTCAAAAGATCGTACACCGTGATGTCAAAACAGAGAATATGCTACTTGATACTCGCATAAACCTTAAAATAGCTGATTTTGGTGTTGCTCGTGTTGAAGCTCAAAATCCAAGAGACATGACTGGTGAAACTGGTACCCTTGGATACATGGCTCCAGAGGTTCTGGATGGTAAGCCTTATAATAGAAGATGTGATGTCTATAGCTTTGGCATATGCTTATGGGAAATTTATTGCTGCGACATGCCCTACCCAGATCTTAGCTTTGCTGATGTATCATCTGCAGTTGTTCGGCAGAACCTACGACCAGAAATCCCCAAATGCTGTCCAAGTTCTTTGGCAAACATCATGCGCAAGTGCTGGGATGGAAATGCAGATAAACGTCCTGAAATGGGTGAGGTGGTGAAAATGTTGGAAGTAATTGATACAAGCAAAGGAGGCGGAATGATACCTGAAGACCGTTCTCCGGGCTGTTTCTGTTTTGCTCCCACTCGCGGGCCATGA

Protein Analysis

407

Amino Acids

45.24

Weight (kDa)

7.03

Isoelectric Point (pI)

34.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 900
Acc16I TGCGCA 1 cut(s) 1070
Acc65I GGTACC 2 cut(s) 332, 854
AccB1I GGYRCC 3 cut(s) 332, 347, 854
AccII CGCG 1 cut(s) 1212
AciI CCGC 3 cut(s) 433, 1158, 1212
AclWI GGATC 2 cut(s) 63, 670
AcsI RAATTY 4 cut(s) 76, 494, 531, 945
AcuI CTGAAG 2 cut(s) 504, 1191
AfaI GTAC 5 cut(s) 42, 256, 334, 735, 856
AfiI CCNNNNNNNGG 6 cut(s) 342, 542, 1109, 1183, 1211, 1212
AgsI TTSAA 9 cut(s) 9, 29, 81, 112, 193, 446, 510, 552, 818
AjnI CCWGG 1 cut(s) 257
Alw26I GTCTC 1 cut(s) 828
AlwI GGATC 2 cut(s) 63, 670
AlwNI CAGNNNCTG 1 cut(s) 416
Ama87I CYCGRG 1 cut(s) 318
AoxI GGCC 2 cut(s) 260, 1214
ApeKI GCWGC 2 cut(s) 425, 954
ApoI RAATTY 4 cut(s) 76, 494, 531, 945
AseI ATTAAT 1 cut(s) 132
Asp718I GGTACC 2 cut(s) 332, 854
AspLEI GCGC 1 cut(s) 1071
AspS9I GGNCC 3 cut(s) 324, 691, 1214
AsuC2I CCSGG 2 cut(s) 230, 1185
AsuHPI GGTGA 4 cut(s) 50, 857, 1124, 1132
AvaI CYCGRG 1 cut(s) 318
AvaII GGWCC 2 cut(s) 324, 691
AxyI CCTNAGG 1 cut(s) 264
BaeGI GKGCMC 1 cut(s) 350
BanI GGYRCC 3 cut(s) 332, 347, 854
BauI CACGAG 1 cut(s) 810
BbsI GAAGAC 1 cut(s) 1179
BbvI GCAGC 2 cut(s) 412, 941
BccI CCATC 5 cut(s) 392, 486, 551, 881, 1076
BciT130I CCWGG 1 cut(s) 259
BciVI GTATCC 1 cut(s) 857
BclI TGATCA 1 cut(s) 358
BcnI CCSGG 2 cut(s) 230, 1185
BcoDI GTCTC 1 cut(s) 828
BfaI CTAG 3 cut(s) 240, 579, 699
BfmI CTRYAG 2 cut(s) 919, 999
BfuI GTATCC 1 cut(s) 857
BglII AGATCT 2 cut(s) 523, 973
BisI GCNGC 2 cut(s) 426, 955
BlsI GCNGC 2 cut(s) 427, 956
Bme1390I CCNGG 3 cut(s) 230, 259, 1185
Bme18I GGWCC 2 cut(s) 324, 691
BmeT110I CYCGRG 1 cut(s) 318
BmgT120I GGNCC 3 cut(s) 324, 691, 1214
BmiI GGNNCC 6 cut(s) 123, 325, 334, 349, 856, 873
BmrFI CCNGG 3 cut(s) 230, 259, 1185
BmrI ACTGGG 1 cut(s) 397
BmsI GCATC 1 cut(s) 446
BmuI ACTGGG 1 cut(s) 397
BpiI GAAGAC 1 cut(s) 1179
BpmI CTGGAG 1 cut(s) 858
BpuEI CTTGAG 1 cut(s) 233
BpuMI CCSGG 2 cut(s) 230, 1185
Bsa29I ATCGAT 1 cut(s) 186
BsaBI GATNNNNATC 1 cut(s) 570
BsaJI CCNNGG 1 cut(s) 859
BsaXI ACNNNNNCTCC 2 cut(s) 91, 121
Bsc4I CCNNNNNNNGG 6 cut(s) 342, 542, 1109, 1183, 1211, 1212
Bse1I ACTGG 3 cut(s) 392, 847, 856
Bse21I CCTNAGG 1 cut(s) 264
Bse8I GATNNNNATC 1 cut(s) 570
BseBI CCWGG 1 cut(s) 259
BseCI ATCGAT 1 cut(s) 186
BseDI CCNNGG 1 cut(s) 859
BseGI GGATG 5 cut(s) 403, 478, 571, 892, 1087
BseJI GATNNNNATC 1 cut(s) 570
BseLI CCNNNNNNNGG 6 cut(s) 342, 542, 1109, 1183, 1211, 1212
BseNI ACTGG 3 cut(s) 392, 847, 856
BseSI GKGCMC 1 cut(s) 350
BseXI GCAGC 2 cut(s) 412, 941
BseYI CCCAGC 1 cut(s) 1077
BsgI GTGCAG 1 cut(s) 114
Bsh1236I CGCG 1 cut(s) 1212
BshFI GGCC 2 cut(s) 262, 1216
BshNI GGYRCC 3 cut(s) 332, 347, 854
BshVI ATCGAT 1 cut(s) 186
BsiHKCI CYCGRG 1 cut(s) 318
BsiSI CCGG 2 cut(s) 229, 1184
BslFI GGGAC 2 cut(s) 337, 631
BslI CCNNNNNNNGG 6 cut(s) 342, 542, 1109, 1183, 1211, 1212
BsmAI GTCTC 1 cut(s) 828
BsmFI GGGAC 2 cut(s) 337, 631
BsmI GAATGC 1 cut(s) 718
BsnI GGCC 2 cut(s) 262, 1216
BsoBI CYCGRG 1 cut(s) 318
Bsp1286I GDGCHC 1 cut(s) 350
Bsp143I GATC 7 cut(s) 55, 165, 358, 523, 675, 729, 973
BspACI CCGC 3 cut(s) 433, 1158, 1212
BspANI GGCC 2 cut(s) 262, 1216
BspDI ATCGAT 1 cut(s) 186
BspFNI CGCG 1 cut(s) 1212
BspLI GGNNCC 6 cut(s) 123, 325, 334, 349, 856, 873
BspMAI CTGCAG 1 cut(s) 1003
BspPI GGATC 2 cut(s) 63, 670
BspQI GCTCTTC 1 cut(s) 553
BspT107I GGYRCC 3 cut(s) 332, 347, 854
BsrI ACTGG 3 cut(s) 392, 847, 856
BssECI CCNNGG 1 cut(s) 859
BssMI GATC 7 cut(s) 55, 165, 358, 523, 675, 729, 973
BssSI CACGAG 1 cut(s) 810
BssT1I CCWWGG 1 cut(s) 859
Bst2BI CACGAG 1 cut(s) 810
Bst2UI CCWGG 1 cut(s) 259
Bst4CI ACNGT 3 cut(s) 337, 740, 1178
Bst6I CTCTTC 1 cut(s) 553
BstC8I GCNNGC 2 cut(s) 435, 1214
BstDEI CTNAG 4 cut(s) 86, 199, 264, 977
BstENI CCTNNNNNAGG 1 cut(s) 540
BstF5I GGATG 5 cut(s) 403, 478, 571, 892, 1087
BstFNI CGCG 1 cut(s) 1212
BstHHI GCGC 1 cut(s) 1071
BstKTI GATC 7 cut(s) 58, 168, 361, 526, 678, 732, 976
BstMAI GTCTC 1 cut(s) 828
BstMBI GATC 7 cut(s) 55, 165, 358, 523, 675, 729, 973
BstMWI GCNNNNNNNGC 4 cut(s) 413, 422, 434, 1155
BstNI CCWGG 1 cut(s) 259
BstNSI RCATGY 1 cut(s) 964
BstSCI CCNGG 3 cut(s) 228, 257, 1183
BstSFI CTRYAG 2 cut(s) 919, 999
BstSLI GKGCMC 1 cut(s) 350
BstUI CGCG 1 cut(s) 1212
BstV1I GCAGC 2 cut(s) 412, 941
BstV2I GAAGAC 1 cut(s) 1179
BstX2I RGATCY 2 cut(s) 523, 973
BstYI RGATCY 2 cut(s) 523, 973
Bsu15I ATCGAT 1 cut(s) 186
Bsu36I CCTNAGG 1 cut(s) 264
BsuI GTATCC 1 cut(s) 857
BsuRI GGCC 2 cut(s) 262, 1216
BsuTUI ATCGAT 1 cut(s) 186
BtsCI GGATG 5 cut(s) 403, 478, 571, 892, 1087
BtsI GCAGTG 1 cut(s) 378
BtsIMutI CAGTG 1 cut(s) 378
Cac8I GCNNGC 2 cut(s) 435, 1214
CaiI CAGNNNCTG 1 cut(s) 416
CfoI GCGC 1 cut(s) 1071
Cfr13I GGNCC 3 cut(s) 324, 691, 1214
ClaI ATCGAT 1 cut(s) 186
Csp6I GTAC 5 cut(s) 41, 255, 333, 734, 855
CspCI CAANNNNNGTGG 2 cut(s) 33, 68
CviAII CATG 6 cut(s) 49, 838, 868, 961, 1066, 1218
CviQI GTAC 5 cut(s) 41, 255, 333, 734, 855
DdeI CTNAG 4 cut(s) 86, 199, 264, 977
DpnI GATC 7 cut(s) 57, 167, 360, 525, 677, 731, 975
DpnII GATC 7 cut(s) 55, 165, 358, 523, 675, 729, 973
Eam1104I CTCTTC 1 cut(s) 553
EarI CTCTTC 1 cut(s) 553
EciI GGCGGA 1 cut(s) 1173
Eco130I CCWWGG 1 cut(s) 859
Eco147I AGGCCT 1 cut(s) 262
Eco47I GGWCC 2 cut(s) 324, 691
Eco57I CTGAAG 2 cut(s) 504, 1191
Eco81I CCTNAGG 1 cut(s) 264
Eco88I CYCGRG 1 cut(s) 318
EcoNI CCTNNNNNAGG 1 cut(s) 540
EcoO109I RGGNCCY 1 cut(s) 324
EcoRI GAATTC 1 cut(s) 76
EcoRII CCWGG 1 cut(s) 257
EcoT14I CCWWGG 1 cut(s) 859
ErhI CCWWGG 1 cut(s) 859
FaeI CATG 6 cut(s) 52, 841, 871, 964, 1069, 1221
FalI AAGNNNNNCTT 2 cut(s) 617, 649
FaqI GGGAC 2 cut(s) 337, 631
FatI CATG 6 cut(s) 48, 837, 867, 960, 1065, 1217
FauI CCCGC 2 cut(s) 426, 1205
FauNDI CATATG 1 cut(s) 932
FbaI TGATCA 1 cut(s) 358
Fnu4HI GCNGC 2 cut(s) 426, 955
FokI GGATG 5 cut(s) 410, 465, 558, 899, 1094
Fsp4HI GCNGC 2 cut(s) 426, 955
FspBI CTAG 3 cut(s) 240, 579, 699
FspI TGCGCA 1 cut(s) 1070
GlaI GCGC 1 cut(s) 1070
GluI GCNGC 2 cut(s) 426, 955
GsaI CCCAGC 1 cut(s) 1081
GsuI CTGGAG 1 cut(s) 858
HaeIII GGCC 2 cut(s) 262, 1216
HapII CCGG 2 cut(s) 229, 1184
HhaI GCGC 1 cut(s) 1071
Hin1II CATG 6 cut(s) 52, 841, 871, 964, 1069, 1221
Hin6I GCGC 1 cut(s) 1069
HinP1I GCGC 1 cut(s) 1069
HindIII AAGCTT 1 cut(s) 470
HinfI GANTC 2 cut(s) 5, 566
HpaII CCGG 2 cut(s) 229, 1184
HphI GGTGA 4 cut(s) 50, 857, 1124, 1132
Hpy166II GTNNAC 1 cut(s) 736
Hpy188I TCNGA 2 cut(s) 173, 523
Hpy188III TCNNGA 7 cut(s) 240, 362, 634, 699, 875, 884, 1103
Hpy8I GTNNAC 1 cut(s) 736
HpyCH4III ACNGT 3 cut(s) 337, 740, 1178
HpyCH4IV ACGT 1 cut(s) 1099
HpyCH4V TGCA 6 cut(s) 35, 95, 371, 718, 1001, 1091
HpyF10VI GCNNNNNNNGC 4 cut(s) 413, 422, 434, 1155
HpyF3I CTNAG 4 cut(s) 86, 199, 264, 977
HpySE526I ACGT 1 cut(s) 1099
Hsp92II CATG 6 cut(s) 52, 841, 871, 964, 1069, 1221
HspAI GCGC 1 cut(s) 1069
KpnI GGTACC 2 cut(s) 336, 858
Ksp22I TGATCA 1 cut(s) 358
Kzo9I GATC 7 cut(s) 55, 165, 358, 523, 675, 729, 973
LguI GCTCTTC 1 cut(s) 553
LmnI GCTCC 3 cut(s) 503, 877, 1207
Lsp1109I GCAGC 2 cut(s) 412, 941
LweI GCATC 1 cut(s) 446
MaeI CTAG 3 cut(s) 240, 579, 699
MaeII ACGT 1 cut(s) 1099
MaeIII GTNAC 1 cut(s) 487
MalI GATC 7 cut(s) 57, 167, 360, 525, 677, 731, 975
MboI GATC 7 cut(s) 55, 165, 358, 523, 675, 729, 973
MboII GAAGA 6 cut(s) 160, 205, 281, 540, 918, 1184
MflI RGATCY 2 cut(s) 523, 973
MhlI GDGCHC 1 cut(s) 350
MluCI AATT 8 cut(s) 76, 129, 293, 494, 531, 629, 945, 1137
MmeI TCCRAC 3 cut(s) 363, 703, 1110
MnlI CCTC 8 cut(s) 109, 314, 388, 695, 704, 871, 1108, 1148
MseI TTAA 4 cut(s) 132, 528, 666, 786
MslI CAYNNNNRTG 2 cut(s) 483, 741
MspI CCGG 2 cut(s) 229, 1184
MspR9I CCNGG 3 cut(s) 230, 259, 1185
Mva1269I GAATGC 1 cut(s) 718
MvaI CCWGG 1 cut(s) 259
MvnI CGCG 1 cut(s) 1212
MwoI GCNNNNNNNGC 4 cut(s) 413, 422, 434, 1155
NciI CCSGG 2 cut(s) 230, 1185
NdeI CATATG 1 cut(s) 932
NdeII GATC 7 cut(s) 55, 165, 358, 523, 675, 729, 973
NlaIII CATG 6 cut(s) 52, 841, 871, 964, 1069, 1221
NlaIV GGNNCC 6 cut(s) 123, 325, 334, 349, 856, 873
NsbI TGCGCA 1 cut(s) 1070
NspI RCATGY 1 cut(s) 964
PaeR7I CTCGAG 1 cut(s) 318
PceI AGGCCT 1 cut(s) 262
PciSI GCTCTTC 1 cut(s) 553
PctI GAATGC 1 cut(s) 718
PfeI GAWTC 2 cut(s) 5, 566
PkrI GCNGC 2 cut(s) 427, 956
PpuMI RGGWCCY 1 cut(s) 324
PshBI ATTAAT 1 cut(s) 132
PsiI TTATAA 1 cut(s) 900
Psp5II RGGWCCY 1 cut(s) 324
Psp6I CCWGG 1 cut(s) 257
PspFI CCCAGC 1 cut(s) 1077
PspGI CCWGG 1 cut(s) 257
PspN4I GGNNCC 6 cut(s) 123, 325, 334, 349, 856, 873
PspPI GGNCC 3 cut(s) 324, 691, 1214
PspPPI RGGWCCY 1 cut(s) 324
PspXI VCTCGAGB 1 cut(s) 318
PstI CTGCAG 1 cut(s) 1003
PstNI CAGNNNCTG 1 cut(s) 416
PsuI RGATCY 2 cut(s) 523, 973
RsaI GTAC 5 cut(s) 42, 256, 334, 735, 856
RsaNI GTAC 5 cut(s) 41, 255, 333, 734, 855
RseI CAYNNNNRTG 2 cut(s) 483, 741
SapI GCTCTTC 1 cut(s) 553
SaqAI TTAA 4 cut(s) 132, 528, 666, 786
SatI GCNGC 2 cut(s) 426, 955
Sau3AI GATC 7 cut(s) 55, 165, 358, 523, 675, 729, 973
Sau96I GGNCC 3 cut(s) 324, 691, 1214
ScrFI CCNGG 3 cut(s) 230, 259, 1185
SduI GDGCHC 1 cut(s) 350
SfaNI GCATC 1 cut(s) 446
SfcI CTRYAG 2 cut(s) 919, 999
Sfr274I CTCGAG 1 cut(s) 318
SinI GGWCC 2 cut(s) 324, 691
SlaI CTCGAG 1 cut(s) 318
SmiMI CAYNNNNRTG 2 cut(s) 483, 741
SmlI CTYRAG 2 cut(s) 212, 318
SmoI CTYRAG 2 cut(s) 212, 318
Sse9I AATT 8 cut(s) 76, 129, 293, 494, 531, 629, 945, 1137
SseBI AGGCCT 1 cut(s) 262
SsiI CCGC 3 cut(s) 433, 1158, 1212
SspMI CTAG 3 cut(s) 240, 579, 699
StuI AGGCCT 1 cut(s) 262
StyD4I CCNGG 3 cut(s) 228, 257, 1183
StyI CCWWGG 1 cut(s) 859
TaaI ACNGT 3 cut(s) 337, 740, 1178
TaiI ACGT 1 cut(s) 1102
TaqI TCGA 2 cut(s) 186, 319
TasI AATT 8 cut(s) 76, 129, 293, 494, 531, 629, 945, 1137
TfiI GAWTC 2 cut(s) 5, 566
Tru1I TTAA 4 cut(s) 132, 528, 666, 786
Tru9I TTAA 4 cut(s) 132, 528, 666, 786
TscAI CASTG 1 cut(s) 378
TseI GCWGC 2 cut(s) 425, 954
TspDTI ATGAA 2 cut(s) 89, 487
TspRI CASTG 1 cut(s) 378
VpaK11BI GGWCC 2 cut(s) 324, 691
VspI ATTAAT 1 cut(s) 132
XagI CCTNNNNNAGG 1 cut(s) 540
XapI RAATTY 4 cut(s) 76, 494, 531, 945
XbaI TCTAGA 2 cut(s) 239, 698
XceI RCATGY 1 cut(s) 964
XhoI CTCGAG 1 cut(s) 318
XspI CTAG 3 cut(s) 240, 579, 699
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.