AT3G57120

Protein tyrosine kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0004825
Physical Location & Seq
Forward (+)
21138821 .. 21140667
1847 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G57120.1

Sequence Viewer

Length: 1371 bp
ATGTCTGATCTTCTAGGTCACCTCCACAAATTCGAACAAGAATTTGTCTTTATGTGCAAAACCAAAATGGGAGTCAATGCTTCAGAGCCAAAACGAACACGATCGCGACCAAGTCAATCGCAGGGGAGGCATCCGTCGACGAGACGATCTCCGTCAACGAGCAACACCGGCACAACAACAACCACGACGACATCGAATTCTAACAAAACTGGTGCCTCCTCTTCCTCCTCCGGTGCGGCTTCTTCCTCAGTCGCTAGTCGAACATCTCTCGCTAGTCTCCGAGAATCCTTACCGGAAAATCCTCACATATACAACGTCTCCGAGATTCGTGCCGCTACCAACAATTTCCTCGCTAATCGCTTATCTTCCTCTTCCTCTAAAGCCTCCTGGCGTTGCAATTTAAGAGGGAAAGAAGTCGTTGTGTTTCAGAGAAAGTTTAGGCGAAGGATCGACACGGATGAGCTTAGAGATCGTCTTTCAGATATTTGCCGGAGCCACCACGGAAGCATCATTAATCTACTCGGCGCTTCTGTTTCCGGCGGTGGAAGAGTAGGAGGAGGAGGAGGAGGAGGAGGTGATCACATCTACTTGGTCTACGAATACGTCAACGGAGCATCTCTAGCTGATTGCTTGAGAAACCCTAAGAACCCTAAATTTACAGTTCTATCGAATTGGACTTCACGGATTCAAATTGCAACAGATCTAGCTCATGGACTCGATTACATCCACAACAAAACCGGATTAAAGATCGAAAACCTAGTTCACAATCACATCAAGAGCTCGGCGGTGATCGTGACGGAGCCAGATTTCAACGCTAAGATCTGTCACTTCGGAACTGCGCAGCTTTGCGGCGAAACAGATGAAATGTCACTGGAGAGAGACGAATCGAGAAATTCAAGGCGATCTGATAGCAGAGCGATCAGATTCGAAGGAGTTAGAGGTTACATGTCGCCGGAATTTCAAAATTTGGGAATCGCTACTCAGAAATCGGATGTTTACGCTTTCGGAGTTATGATGTTGGAGCTTCTCTCAGGCGAGGAGCCGTTGAAGTACAGGTATGATAAAGCCACAGGAGATTTCGAGCGGACGTCGGTGATTGAAACGGCGAGAGCGGCGATCGAAGATGGAGATGGTGATAGAGATGGAAGACTGAGGAGGTGGATGGATCGGAGATTGGAGGATTCGTTTCCTGTGACGGTGGTGGAGAAGTTAACGAGGCTAGCGTTGGATTGTGTTCAGGATGATCCAGTGAATAGGCCGGAGATGGGAAGAGTCGCCGGAAAAATATCACAACTGTATTTAGAATCGGAAAAATGGTCGGCGAATATGAAACGGCCAACGGATATCACCGTCTCTTTCGCTCCCAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase Pkinase_Tyr

Protein Analysis

456

Amino Acids

50.51

Weight (kDa)

9.23

Isoelectric Point (pI)

59.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 151 - 426 1.3e-18 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 164 - 422 5.4e-20 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1091
Acc16I TGCGCA 1 cut(s) 840
AccB1I GGYRCC 1 cut(s) 212
AccBSI CCGCTC 2 cut(s) 1084, 1112
AccI GTMKAC 2 cut(s) 137, 594
AccII CGCG 1 cut(s) 106
AciI CCGC 7 cut(s) 236, 333, 540, 785, 849, 1084, 1112
AclWI GGATC 3 cut(s) 455, 1173, 1238
AcoI YGGCCR 1 cut(s) 1334
AcsI RAATTY 7 cut(s) 29, 41, 196, 653, 892, 956, 964
AcuI CTGAAG 1 cut(s) 66
AcyI GRCGYC 1 cut(s) 1088
AfaI GTAC 1 cut(s) 1052
AfiI CCNNNNNNNGG 1 cut(s) 1265
AflIII ACRYGT 1 cut(s) 945
AgsI TTSAA 6 cut(s) 689, 811, 897, 962, 1048, 1100
AjnI CCWGG 1 cut(s) 386
AluBI AGCT 6 cut(s) 463, 623, 707, 780, 844, 1024
AluI AGCT 6 cut(s) 463, 623, 707, 780, 844, 1024
Alw21I GWGCWC 1 cut(s) 782
Alw26I GTCTC 5 cut(s) 136, 281, 322, 873, 1357
AlwI GGATC 3 cut(s) 455, 1173, 1238
AoxI GGCC 2 cut(s) 1256, 1334
ApeKI GCWGC 1 cut(s) 841
ApoI RAATTY 7 cut(s) 29, 41, 196, 653, 892, 956, 964
ArsI GACNNNNNNTTYG 2 cut(s) 57, 89
AseI ATTAAT 1 cut(s) 513
AspLEI GCGC 2 cut(s) 527, 841
AsuHPI GGTGA 6 cut(s) 11, 587, 799, 1105, 1145, 1339
AsuII TTCGAA 2 cut(s) 33, 927
AsuNHI GCTAGC 1 cut(s) 1219
BanI GGYRCC 1 cut(s) 212
BanII GRGCYC 1 cut(s) 782
BbsI GAAGAC 1 cut(s) 1153
Bbv12I GWGCWC 1 cut(s) 782
BbvI GCAGC 1 cut(s) 853
BccI CCATC 5 cut(s) 1118, 1124, 1136, 1156, 1258
BceAI ACGGC 3 cut(s) 1027, 1119, 1349
BcgI CGANNNNNNTGC 2 cut(s) 311, 345
BciT130I CCWGG 1 cut(s) 388
BclI TGATCA 1 cut(s) 577
BcoDI GTCTC 5 cut(s) 136, 281, 322, 873, 1357
BfaI CTAG 7 cut(s) 14, 255, 273, 620, 704, 758, 1220
BfoI RGCGCY 1 cut(s) 528
BglII AGATCT 2 cut(s) 700, 819
BisI GCNGC 5 cut(s) 237, 333, 842, 850, 1113
BlsI GCNGC 5 cut(s) 238, 334, 843, 851, 1114
Bme1390I CCNGG 1 cut(s) 388
BmiI GGNNCC 4 cut(s) 214, 494, 801, 1041
BmrFI CCNGG 1 cut(s) 388
BmsI GCATC 3 cut(s) 139, 516, 623
BmtI GCTAGC 1 cut(s) 1223
BpiI GAAGAC 1 cut(s) 1153
BplI GAGNNNNNCTC 4 cut(s) 133, 165, 1013, 1045
BpmI CTGGAG 1 cut(s) 893
Bpu14I TTCGAA 2 cut(s) 33, 927
BpuEI CTTGAG 1 cut(s) 652
BsaHI GRCGYC 1 cut(s) 1088
BsaJI CCNNGG 1 cut(s) 499
BsaWI WCCGGW 3 cut(s) 230, 292, 737
BsaXI ACNNNNNCTCC 4 cut(s) 302, 332, 1169, 1199
Bsc4I CCNNNNNNNGG 1 cut(s) 1265
Bse118I RCCGGY 1 cut(s) 167
Bse1I ACTGG 3 cut(s) 214, 876, 1247
BseBI CCWGG 1 cut(s) 388
BseDI CCNNGG 1 cut(s) 499
BseGI GGATG 6 cut(s) 130, 463, 723, 997, 1167, 1246
BseLI CCNNNNNNNGG 1 cut(s) 1265
BseMII CTCAG 4 cut(s) 261, 995, 1044, 1142
BseNI ACTGG 3 cut(s) 214, 876, 1247
BseXI GCAGC 1 cut(s) 853
Bsh1236I CGCG 1 cut(s) 106
Bsh1285I CGRYCG 2 cut(s) 104, 1119
BshFI GGCC 2 cut(s) 1258, 1336
BshNI GGYRCC 1 cut(s) 212
BsiEI CGRYCG 2 cut(s) 104, 1119
BsiHKAI GWGCWC 1 cut(s) 782
BsiSI CCGG 9 cut(s) 168, 231, 293, 490, 537, 738, 953, 1259, 1278
BslI CCNNNNNNNGG 1 cut(s) 1265
BsmAI GTCTC 5 cut(s) 136, 281, 322, 873, 1357
BsmBI CGTCTC 4 cut(s) 136, 322, 873, 1357
BsnI GGCC 2 cut(s) 1258, 1336
Bsp119I TTCGAA 2 cut(s) 33, 927
Bsp1286I GDGCHC 1 cut(s) 782
Bsp68I TCGCGA 1 cut(s) 106
BspACI CCGC 7 cut(s) 236, 333, 540, 785, 849, 1084, 1112
BspANI GGCC 2 cut(s) 1258, 1336
BspCNI CTCAG 4 cut(s) 260, 994, 1043, 1143
BspFNI CGCG 1 cut(s) 106
BspLI GGNNCC 4 cut(s) 214, 494, 801, 1041
BspOI GCTAGC 1 cut(s) 1223
BspPI GGATC 3 cut(s) 455, 1173, 1238
BspT104I TTCGAA 2 cut(s) 33, 927
BspT107I GGYRCC 1 cut(s) 212
BsrBI CCGCTC 2 cut(s) 1084, 1112
BsrFI RCCGGY 1 cut(s) 167
BsrI ACTGG 3 cut(s) 214, 876, 1247
BssAI RCCGGY 1 cut(s) 167
BssECI CCNNGG 1 cut(s) 499
BssNI GRCGYC 1 cut(s) 1088
Bst2UI CCWGG 1 cut(s) 388
Bst4CI ACNGT 4 cut(s) 661, 1198, 1296, 1351
Bst6I CTCTTC 4 cut(s) 226, 376, 541, 1264
BstACI GRCGYC 1 cut(s) 1088
BstBI TTCGAA 2 cut(s) 33, 927
BstC8I GCNNGC 1 cut(s) 1221
BstDEI CTNAG 7 cut(s) 247, 464, 642, 816, 981, 1030, 1151
BstDSI CCRYGG 1 cut(s) 499
BstEII GGTNACC 1 cut(s) 17
BstF5I GGATG 6 cut(s) 130, 463, 723, 997, 1167, 1246
BstFNI CGCG 1 cut(s) 106
BstH2I RGCGCY 1 cut(s) 528
BstHHI GCGC 2 cut(s) 527, 841
BstMAI GTCTC 5 cut(s) 136, 281, 322, 873, 1357
BstMCI CGRYCG 2 cut(s) 104, 1119
BstMWI GCNNNNNNNGC 4 cut(s) 127, 168, 620, 1112
BstNI CCWGG 1 cut(s) 388
BstNSI RCATGY 1 cut(s) 949
BstPI GGTNACC 1 cut(s) 17
BstSCI CCNGG 1 cut(s) 386
BstUI CGCG 1 cut(s) 106
BstV1I GCAGC 1 cut(s) 853
BstV2I GAAGAC 1 cut(s) 1153
BstX2I RGATCY 2 cut(s) 700, 819
BstYI RGATCY 2 cut(s) 700, 819
BsuRI GGCC 2 cut(s) 1258, 1336
BtgI CCRYGG 1 cut(s) 499
BtsCI GGATG 6 cut(s) 130, 463, 723, 997, 1167, 1246
BtsIMutI CAGTG 2 cut(s) 869, 1254
BtuMI TCGCGA 1 cut(s) 106
Cac8I GCNNGC 1 cut(s) 1221
CfoI GCGC 2 cut(s) 527, 841
Cfr10I RCCGGY 1 cut(s) 167
Csp6I GTAC 1 cut(s) 1051
CviAII CATG 2 cut(s) 710, 946
CviQI GTAC 1 cut(s) 1051
DdeI CTNAG 7 cut(s) 247, 464, 642, 816, 981, 1030, 1151
EaeI YGGCCR 1 cut(s) 1334
Eam1104I CTCTTC 4 cut(s) 226, 376, 541, 1264
EarI CTCTTC 4 cut(s) 226, 376, 541, 1264
Ecl136II GAGCTC 1 cut(s) 780
Eco24I GRGCYC 1 cut(s) 782
Eco32I GATATC 1 cut(s) 1345
Eco53kI GAGCTC 1 cut(s) 780
Eco57I CTGAAG 1 cut(s) 66
Eco91I GGTNACC 1 cut(s) 17
EcoICRI GAGCTC 1 cut(s) 780
EcoO65I GGTNACC 1 cut(s) 17
EcoRI GAATTC 1 cut(s) 196
EcoRII CCWGG 1 cut(s) 386
EcoRV GATATC 1 cut(s) 1345
EcoT38I GRGCYC 1 cut(s) 782
Esp3I CGTCTC 4 cut(s) 136, 322, 873, 1357
FaeI CATG 2 cut(s) 713, 949
FaiI YATR 8 cut(s) 53, 308, 310, 711, 947, 1013, 1059, 1328
FatI CATG 2 cut(s) 709, 945
FbaI TGATCA 1 cut(s) 577
FblI GTMKAC 2 cut(s) 137, 594
Fnu4HI GCNGC 5 cut(s) 237, 333, 842, 850, 1113
FokI GGATG 6 cut(s) 117, 470, 710, 1004, 1174, 1253
FriOI GRGCYC 1 cut(s) 782
Fsp4HI GCNGC 5 cut(s) 237, 333, 842, 850, 1113
FspBI CTAG 7 cut(s) 14, 255, 273, 620, 704, 758, 1220
FspI TGCGCA 1 cut(s) 840
GlaI GCGC 2 cut(s) 526, 840
GluI GCNGC 5 cut(s) 237, 333, 842, 850, 1113
GsuI CTGGAG 1 cut(s) 893
HaeII RGCGCY 1 cut(s) 528
HaeIII GGCC 2 cut(s) 1258, 1336
HapII CCGG 9 cut(s) 168, 231, 293, 490, 537, 738, 953, 1259, 1278
HhaI GCGC 2 cut(s) 527, 841
Hin1I GRCGYC 1 cut(s) 1088
Hin1II CATG 2 cut(s) 713, 949
Hin6I GCGC 2 cut(s) 525, 839
HinP1I GCGC 2 cut(s) 525, 839
HincII GTYRAC 4 cut(s) 138, 156, 607, 1212
HindII GTYRAC 4 cut(s) 138, 156, 607, 1212
HpaI GTTAAC 1 cut(s) 1212
HpaII CCGG 9 cut(s) 168, 231, 293, 490, 537, 738, 953, 1259, 1278
HphI GGTGA 6 cut(s) 11, 587, 799, 1105, 1145, 1339
Hpy166II GTNNAC 7 cut(s) 138, 156, 595, 607, 763, 997, 1212
Hpy188III TCNNGA 5 cut(s) 105, 775, 793, 888, 1238
Hpy8I GTNNAC 7 cut(s) 138, 156, 595, 607, 763, 997, 1212
Hpy99I CGWCG 4 cut(s) 139, 142, 190, 1093
HpyAV CCTTC 2 cut(s) 438, 923
HpyCH4III ACNGT 4 cut(s) 661, 1198, 1296, 1351
HpyCH4IV ACGT 3 cut(s) 315, 603, 1088
HpyCH4V TGCA 3 cut(s) 57, 396, 695
HpyF10VI GCNNNNNNNGC 4 cut(s) 127, 168, 620, 1112
HpyF3I CTNAG 7 cut(s) 247, 464, 642, 816, 981, 1030, 1151
HpySE526I ACGT 3 cut(s) 315, 603, 1088
Hsp92I GRCGYC 1 cut(s) 1088
Hsp92II CATG 2 cut(s) 713, 949
HspAI GCGC 2 cut(s) 525, 839
Ksp22I TGATCA 1 cut(s) 577
KspAI GTTAAC 1 cut(s) 1212
LmnI GCTCC 6 cut(s) 492, 611, 799, 1021, 1039, 1366
Lsp1109I GCAGC 1 cut(s) 853
LweI GCATC 3 cut(s) 139, 516, 623
MaeI CTAG 7 cut(s) 14, 255, 273, 620, 704, 758, 1220
MaeII ACGT 3 cut(s) 315, 603, 1088
MaeIII GTNAC 6 cut(s) 17, 793, 824, 867, 941, 1192
MbiI CCGCTC 2 cut(s) 1084, 1112
MboII GAAGA 8 cut(s) 213, 234, 357, 363, 558, 1133, 1158, 1281
MflI RGATCY 2 cut(s) 700, 819
MhlI GDGCHC 1 cut(s) 782
MlyI GAGTC 3 cut(s) 81, 708, 1281
MmeI TCCRAC 2 cut(s) 999, 1206
MseI TTAA 4 cut(s) 401, 513, 743, 1211
MspI CCGG 9 cut(s) 168, 231, 293, 490, 537, 738, 953, 1259, 1278
MspR9I CCNGG 1 cut(s) 388
MvaI CCWGG 1 cut(s) 388
MvnI CGCG 1 cut(s) 106
MwoI GCNNNNNNNGC 4 cut(s) 127, 168, 620, 1112
NheI GCTAGC 1 cut(s) 1219
NlaIII CATG 2 cut(s) 713, 949
NlaIV GGNNCC 4 cut(s) 214, 494, 801, 1041
NmeAIII GCCGAG 2 cut(s) 501, 761
NmuCI GTSAC 5 cut(s) 17, 793, 824, 867, 1192
NruI TCGCGA 1 cut(s) 106
NsbI TGCGCA 1 cut(s) 840
NspI RCATGY 1 cut(s) 949
NspV TTCGAA 2 cut(s) 33, 927
PciI ACATGT 1 cut(s) 945
PcsI WCGNNNNNNNCGW 2 cut(s) 191, 1220
PfeI GAWTC 8 cut(s) 284, 325, 685, 884, 924, 972, 1181, 1304
PflFI GACNNNGTC 1 cut(s) 111
PkrI GCNGC 5 cut(s) 238, 334, 843, 851, 1114
Ple19I CGATCG 2 cut(s) 104, 1119
PleI GAGTC 3 cut(s) 80, 708, 1280
PpsI GAGTC 3 cut(s) 80, 708, 1280
PscI ACATGT 1 cut(s) 945
PshBI ATTAAT 1 cut(s) 513
Psp124BI GAGCTC 1 cut(s) 782
Psp6I CCWGG 1 cut(s) 386
PspEI GGTNACC 1 cut(s) 17
PspGI CCWGG 1 cut(s) 386
PspN4I GGNNCC 4 cut(s) 214, 494, 801, 1041
PsuI RGATCY 2 cut(s) 700, 819
PsyI GACNNNGTC 1 cut(s) 111
PvuI CGATCG 2 cut(s) 104, 1119
RruI TCGCGA 1 cut(s) 106
RsaI GTAC 1 cut(s) 1052
RsaNI GTAC 1 cut(s) 1051
SacI GAGCTC 1 cut(s) 782
SalI GTCGAC 1 cut(s) 136
SaqAI TTAA 4 cut(s) 401, 513, 743, 1211
SatI GCNGC 5 cut(s) 237, 333, 842, 850, 1113
SchI GAGTC 3 cut(s) 81, 708, 1281
ScrFI CCNGG 1 cut(s) 388
SduI GDGCHC 1 cut(s) 782
SfaNI GCATC 3 cut(s) 139, 516, 623
SfuI TTCGAA 2 cut(s) 33, 927
SgrDI CGTCGACG 1 cut(s) 136
SmlI CTYRAG 1 cut(s) 631
SmoI CTYRAG 1 cut(s) 631
SsiI CCGC 7 cut(s) 236, 333, 540, 785, 849, 1084, 1112
SspMI CTAG 7 cut(s) 14, 255, 273, 620, 704, 758, 1220
SstI GAGCTC 1 cut(s) 782
StyD4I CCNGG 1 cut(s) 386
TaaI ACNGT 4 cut(s) 661, 1198, 1296, 1351
TaiI ACGT 3 cut(s) 318, 606, 1091
TatI WGTACW 1 cut(s) 1050
TauI GCSGC 4 cut(s) 239, 335, 852, 1115
TfiI GAWTC 8 cut(s) 284, 325, 685, 884, 924, 972, 1181, 1304
Tru1I TTAA 4 cut(s) 401, 513, 743, 1211
Tru9I TTAA 4 cut(s) 401, 513, 743, 1211
TscAI CASTG 2 cut(s) 876, 1254
TseFI GTSAC 5 cut(s) 17, 793, 824, 867, 1192
TseI GCWGC 1 cut(s) 841
Tsp45I GTSAC 5 cut(s) 17, 793, 824, 867, 1192
TspDTI ATGAA 2 cut(s) 876, 1343
TspGWI ACGGA 8 cut(s) 123, 141, 470, 516, 624, 697, 812, 1355
TspRI CASTG 2 cut(s) 876, 1254
Tth111I GACNNNGTC 1 cut(s) 111
VspI ATTAAT 1 cut(s) 513
XapI RAATTY 7 cut(s) 29, 41, 196, 653, 892, 956, 964
XceI RCATGY 1 cut(s) 949
XmiI GTMKAC 2 cut(s) 137, 594
XspI CTAG 7 cut(s) 14, 255, 273, 620, 704, 758, 1220
ZraI GACGTC 1 cut(s) 1089
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.