lysM domain receptor-like kinase 3
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G57120 |
| fragaria_vesca | FvH4_3g31560 FvH4_7g19030 |
| malus_domestica | MD01G1105700.v1.1 MD03G1123700.v1.1 MD07G1172200.v1.1 MD12G1106300.v1.1 |
| prunus_persica | Prupe.2G211100_v2.0.a1 Prupe.6G106100_v2.0.a1 |
| pyrus_communis | pycom01g13250 pycom07g16650 pycom17g07150 |
| rosa_chinensis | RchiOBHm_Chr1g0362941 RchiOBHm_Chr5g0058201 |
| rosa_laevigata | RLG00000027610 RLG00000035203 |
| rosa_multiflora | Rmu_sc0000367.1_g000042 Rmu_sc0019019.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00022330 Rroxscaffold_4G00293630 |
| rosa_rugosa | Rorug01G0302200 Rorug05G0312700 |
| rosa_samantha | Rh1AG311800 Rh1BG274900 Rh1CG292100 Rh1DG305600 Rh5BG391900 Rh5CG415800 Rh5DG406400 |
| rosa_wichuraiana | Rw1G027630 Rw5G035840 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 931 |
| AccB1I | GGYRCC | 2 cut(s) | 470, 521 |
| AccI | GTMKAC | 3 cut(s) | 24, 504, 1044 |
| AccII | CGCG | 7 cut(s) | 351, 387, 494, 617, 923, 947, 1200 |
| AccIII | TCCGGA | 1 cut(s) | 543 |
| AclWI | GGATC | 4 cut(s) | 232, 618, 798, 1185 |
| AcoI | YGGCCR | 1 cut(s) | 121 |
| AcsI | RAATTY | 1 cut(s) | 380 |
| AcvI | CACGTG | 2 cut(s) | 582, 1168 |
| AcyI | GRCGYC | 5 cut(s) | 27, 360, 471, 522, 918 |
| AfaI | GTAC | 6 cut(s) | 773, 850, 890, 944, 998, 1164 |
| AfeI | AGCGCT | 1 cut(s) | 293 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 51, 67, 355, 543, 739, 858, 1193 |
| AflIII | ACRYGT | 7 cut(s) | 492, 891, 939, 945, 1142, 1165, 1198 |
| AgeI | ACCGGT | 1 cut(s) | 1268 |
| AgsI | TTSAA | 4 cut(s) | 298, 718, 844, 994 |
| AjiI | CACGTC | 1 cut(s) | 940 |
| AjnI | CCWGG | 5 cut(s) | 332, 528, 590, 1053, 1085 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1258, 1290 |
| Alw21I | GWGCWC | 5 cut(s) | 261, 411, 963, 972, 1264 |
| Alw26I | GTCTC | 3 cut(s) | 484, 755, 1285 |
| AlwI | GGATC | 4 cut(s) | 232, 618, 798, 1185 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 625 |
| Ama87I | CYCGRG | 1 cut(s) | 1291 |
| Aor13HI | TCCGGA | 1 cut(s) | 543 |
| Aor51HI | AGCGCT | 1 cut(s) | 293 |
| AoxI | GGCC | 9 cut(s) | 121, 585, 649, 744, 816, 826, 909, 1050, 1184 |
| ApeKI | GCWGC | 6 cut(s) | 339, 438, 533, 690, 855, 1058 |
| ApoI | RAATTY | 1 cut(s) | 380 |
| ArsI | GACNNNNNNTTYG | 3 cut(s) | 38, 1229, 1261 |
| AsiGI | ACCGGT | 1 cut(s) | 1268 |
| AspLEI | GCGC | 7 cut(s) | 57, 266, 294, 339, 473, 524, 619 |
| AsuC2I | CCSGG | 2 cut(s) | 404, 1175 |
| AsuHPI | GGTGA | 4 cut(s) | 448, 694, 892, 1031 |
| AsuII | TTCGAA | 1 cut(s) | 873 |
| AvaI | CYCGRG | 1 cut(s) | 1291 |
| AvaII | GGWCC | 4 cut(s) | 571, 1083, 1171, 1245 |
| BanI | GGYRCC | 2 cut(s) | 470, 521 |
| BanII | GRGCYC | 5 cut(s) | 261, 411, 711, 972, 1264 |
| BbrPI | CACGTG | 2 cut(s) | 582, 1168 |
| Bbv12I | GWGCWC | 5 cut(s) | 261, 411, 963, 972, 1264 |
| BbvI | GCAGC | 6 cut(s) | 326, 450, 545, 702, 867, 1045 |
| BccI | CCATC | 3 cut(s) | 209, 461, 786 |
| BceAI | ACGGC | 5 cut(s) | 82, 347, 434, 803, 1199 |
| BciT130I | CCWGG | 5 cut(s) | 334, 530, 592, 1055, 1087 |
| BcnI | CCSGG | 2 cut(s) | 404, 1175 |
| BcoDI | GTCTC | 3 cut(s) | 484, 755, 1285 |
| BfaI | CTAG | 1 cut(s) | 665 |
| BfoI | RGCGCY | 4 cut(s) | 295, 340, 474, 525 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 530 |
| Bme1390I | CCNGG | 7 cut(s) | 334, 404, 530, 592, 1055, 1087, 1175 |
| Bme18I | GGWCC | 4 cut(s) | 571, 1083, 1171, 1245 |
| BmeT110I | CYCGRG | 1 cut(s) | 1291 |
| BmgBI | CACGTC | 1 cut(s) | 940 |
| BmiI | GGNNCC | 5 cut(s) | 472, 523, 548, 829, 1173 |
| BmrFI | CCNGG | 7 cut(s) | 334, 404, 530, 592, 1055, 1087, 1175 |
| BmrI | ACTGGG | 1 cut(s) | 154 |
| BmsI | GCATC | 1 cut(s) | 585 |
| BmuI | ACTGGG | 1 cut(s) | 154 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1201 |
| BpmI | CTGGAG | 3 cut(s) | 466, 574, 1175 |
| Bpu10I | CCTNAGC | 2 cut(s) | 116, 410 |
| Bpu14I | TTCGAA | 1 cut(s) | 873 |
| BpuEI | CTTGAG | 2 cut(s) | 124, 1088 |
| BpuMI | CCSGG | 2 cut(s) | 404, 1175 |
| BsaAI | YACGTR | 2 cut(s) | 582, 1168 |
| BsaBI | GATNNNNATC | 1 cut(s) | 599 |
| BsaHI | GRCGYC | 5 cut(s) | 27, 360, 471, 522, 918 |
| BsaI | GGTCTC | 2 cut(s) | 755, 1285 |
| BsaJI | CCNNGG | 9 cut(s) | 50, 349, 402, 466, 606, 1035, 1053, 1086, 1119 |
| BsaWI | WCCGGW | 2 cut(s) | 543, 1268 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 51, 67, 355, 543, 739, 858, 1193 |
| Bse118I | RCCGGY | 1 cut(s) | 1268 |
| Bse1I | ACTGG | 2 cut(s) | 160, 868 |
| Bse8I | GATNNNNATC | 1 cut(s) | 599 |
| BseAI | TCCGGA | 1 cut(s) | 543 |
| BseBI | CCWGG | 5 cut(s) | 334, 530, 592, 1055, 1087 |
| BseDI | CCNNGG | 9 cut(s) | 50, 349, 402, 466, 606, 1035, 1053, 1086, 1119 |
| BseGI | GGATG | 3 cut(s) | 201, 600, 633 |
| BseJI | GATNNNNATC | 1 cut(s) | 599 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 51, 67, 355, 543, 739, 858, 1193 |
| BseMII | CTCAG | 3 cut(s) | 424, 1070, 1122 |
| BseNI | ACTGG | 2 cut(s) | 160, 868 |
| BseRI | GAGGAG | 7 cut(s) | 39, 145, 301, 304, 307, 310, 455 |
| BseX3I | CGGCCG | 1 cut(s) | 121 |
| BseXI | GCAGC | 6 cut(s) | 326, 450, 545, 702, 867, 1045 |
| BseYI | CCCAGC | 3 cut(s) | 33, 747, 1187 |
| BsgI | GTGCAG | 1 cut(s) | 325 |
| Bsh1236I | CGCG | 7 cut(s) | 351, 387, 494, 617, 923, 947, 1200 |
| Bsh1285I | CGRYCG | 1 cut(s) | 124 |
| BshFI | GGCC | 9 cut(s) | 123, 587, 651, 746, 818, 828, 911, 1052, 1186 |
| BshNI | GGYRCC | 2 cut(s) | 470, 521 |
| BshTI | ACCGGT | 1 cut(s) | 1268 |
| BsiEI | CGRYCG | 1 cut(s) | 124 |
| BsiHKAI | GWGCWC | 5 cut(s) | 261, 411, 963, 972, 1264 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1291 |
| BsiSI | CCGG | 7 cut(s) | 404, 544, 859, 899, 915, 1175, 1269 |
| BslFI | GGGAC | 3 cut(s) | 148, 209, 1209 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 51, 67, 355, 543, 739, 858, 1193 |
| BsmAI | GTCTC | 3 cut(s) | 484, 755, 1285 |
| BsmBI | CGTCTC | 1 cut(s) | 484 |
| BsmFI | GGGAC | 3 cut(s) | 148, 209, 1209 |
| BsnI | GGCC | 9 cut(s) | 123, 587, 651, 746, 818, 828, 911, 1052, 1186 |
| Bso31I | GGTCTC | 2 cut(s) | 755, 1285 |
| BsoBI | CYCGRG | 1 cut(s) | 1291 |
| Bsp119I | TTCGAA | 1 cut(s) | 873 |
| Bsp1286I | GDGCHC | 6 cut(s) | 261, 411, 711, 963, 972, 1264 |
| Bsp13I | TCCGGA | 1 cut(s) | 543 |
| Bsp143I | GATC | 5 cut(s) | 237, 600, 610, 803, 1177 |
| Bsp68I | TCGCGA | 1 cut(s) | 923 |
| BspANI | GGCC | 9 cut(s) | 123, 587, 651, 746, 818, 828, 911, 1052, 1186 |
| BspCNI | CTCAG | 3 cut(s) | 423, 1071, 1123 |
| BspEI | TCCGGA | 1 cut(s) | 543 |
| BspFNI | CGCG | 7 cut(s) | 351, 387, 494, 617, 923, 947, 1200 |
| BspLI | GGNNCC | 5 cut(s) | 472, 523, 548, 829, 1173 |
| BspPI | GGATC | 4 cut(s) | 232, 618, 798, 1185 |
| BspT104I | TTCGAA | 1 cut(s) | 873 |
| BspT107I | GGYRCC | 2 cut(s) | 470, 521 |
| BspTNI | GGTCTC | 2 cut(s) | 755, 1285 |
| BsrFI | RCCGGY | 1 cut(s) | 1268 |
| BsrI | ACTGG | 2 cut(s) | 160, 868 |
| BssAI | RCCGGY | 1 cut(s) | 1268 |
| BssECI | CCNNGG | 9 cut(s) | 50, 349, 402, 466, 606, 1035, 1053, 1086, 1119 |
| BssMI | GATC | 5 cut(s) | 237, 600, 610, 803, 1177 |
| BssNI | GRCGYC | 5 cut(s) | 27, 360, 471, 522, 918 |
| Bst2UI | CCWGG | 5 cut(s) | 334, 530, 592, 1055, 1087 |
| Bst4CI | ACNGT | 2 cut(s) | 571, 848 |
| Bst6I | CTCTTC | 2 cut(s) | 91, 184 |
| BstACI | GRCGYC | 5 cut(s) | 27, 360, 471, 522, 918 |
| BstBAI | YACGTR | 2 cut(s) | 582, 1168 |
| BstBI | TTCGAA | 1 cut(s) | 873 |
| BstC8I | GCNNGC | 6 cut(s) | 475, 526, 538, 724, 1100, 1287 |
| BstDEI | CTNAG | 5 cut(s) | 116, 410, 499, 1079, 1131 |
| BstDSI | CCRYGG | 3 cut(s) | 349, 606, 1119 |
| BstEII | GGTNACC | 1 cut(s) | 700 |
| BstF5I | GGATG | 3 cut(s) | 201, 600, 633 |
| BstFNI | CGCG | 7 cut(s) | 351, 387, 494, 617, 923, 947, 1200 |
| BstH2I | RGCGCY | 4 cut(s) | 295, 340, 474, 525 |
| BstHHI | GCGC | 7 cut(s) | 57, 266, 294, 339, 473, 524, 619 |
| BstKTI | GATC | 5 cut(s) | 240, 603, 613, 806, 1180 |
| BstMAI | GTCTC | 3 cut(s) | 484, 755, 1285 |
| BstMBI | GATC | 5 cut(s) | 237, 600, 610, 803, 1177 |
| BstMCI | CGRYCG | 1 cut(s) | 124 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 61, 348, 384, 483, 525, 530, 967, 1058, 1197 |
| BstNI | CCWGG | 5 cut(s) | 334, 530, 592, 1055, 1087 |
| BstNSI | RCATGY | 1 cut(s) | 895 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1201 |
| BstPI | GGTNACC | 1 cut(s) | 700 |
| BstSCI | CCNGG | 7 cut(s) | 332, 402, 528, 590, 1053, 1085, 1173 |
| BstUI | CGCG | 7 cut(s) | 351, 387, 494, 617, 923, 947, 1200 |
| BstV1I | GCAGC | 6 cut(s) | 326, 450, 545, 702, 867, 1045 |
| BstX2I | RGATCY | 1 cut(s) | 610 |
| BstYI | RGATCY | 1 cut(s) | 610 |
| BstZI | CGGCCG | 1 cut(s) | 121 |
| BsuRI | GGCC | 9 cut(s) | 123, 587, 651, 746, 818, 828, 911, 1052, 1186 |
| BtgI | CCRYGG | 3 cut(s) | 349, 606, 1119 |
| BtrI | CACGTC | 1 cut(s) | 940 |
| BtsCI | GGATG | 3 cut(s) | 201, 600, 633 |
| BtuMI | TCGCGA | 1 cut(s) | 923 |
| Cac8I | GCNNGC | 6 cut(s) | 475, 526, 538, 724, 1100, 1287 |
| CaiI | CAGNNNCTG | 1 cut(s) | 625 |
| CciNI | GCGGCCGC | 1 cut(s) | 121 |
| CfoI | GCGC | 7 cut(s) | 57, 266, 294, 339, 473, 524, 619 |
| Cfr10I | RCCGGY | 1 cut(s) | 1268 |
| Cfr42I | CCGCGG | 1 cut(s) | 352 |
| CseI | GACGC | 6 cut(s) | 35, 368, 466, 907, 934, 1206 |
| Csp6I | GTAC | 6 cut(s) | 772, 849, 889, 943, 997, 1163 |
| CspAI | ACCGGT | 1 cut(s) | 1268 |
| CviAII | CATG | 4 cut(s) | 892, 1070, 1192, 1255 |
| CviQI | GTAC | 6 cut(s) | 772, 849, 889, 943, 997, 1163 |
| DdeI | CTNAG | 5 cut(s) | 116, 410, 499, 1079, 1131 |
| DinI | GGCGCC | 2 cut(s) | 472, 523 |
| DpnI | GATC | 5 cut(s) | 239, 602, 612, 805, 1179 |
| DpnII | GATC | 5 cut(s) | 237, 600, 610, 803, 1177 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 931 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 931 |
| EaeI | YGGCCR | 1 cut(s) | 121 |
| EagI | CGGCCG | 1 cut(s) | 121 |
| Eam1104I | CTCTTC | 2 cut(s) | 91, 184 |
| EarI | CTCTTC | 2 cut(s) | 91, 184 |
| Ecl136II | GAGCTC | 4 cut(s) | 259, 409, 970, 1262 |
| EclXI | CGGCCG | 1 cut(s) | 121 |
| Eco147I | AGGCCT | 1 cut(s) | 911 |
| Eco24I | GRGCYC | 5 cut(s) | 261, 411, 711, 972, 1264 |
| Eco31I | GGTCTC | 2 cut(s) | 755, 1285 |
| Eco47I | GGWCC | 4 cut(s) | 571, 1083, 1171, 1245 |
| Eco47III | AGCGCT | 1 cut(s) | 293 |
| Eco52I | CGGCCG | 1 cut(s) | 121 |
| Eco53kI | GAGCTC | 4 cut(s) | 259, 409, 970, 1262 |
| Eco72I | CACGTG | 2 cut(s) | 582, 1168 |
| Eco88I | CYCGRG | 1 cut(s) | 1291 |
| Eco91I | GGTNACC | 1 cut(s) | 700 |
| EcoICRI | GAGCTC | 4 cut(s) | 259, 409, 970, 1262 |
| EcoO109I | RGGNCCY | 2 cut(s) | 827, 1083 |
| EcoO65I | GGTNACC | 1 cut(s) | 700 |
| EcoRII | CCWGG | 5 cut(s) | 332, 528, 590, 1053, 1085 |
| EcoT38I | GRGCYC | 5 cut(s) | 261, 411, 711, 972, 1264 |
| EgeI | GGCGCC | 2 cut(s) | 472, 523 |
| EheI | GGCGCC | 2 cut(s) | 472, 523 |
| Esp3I | CGTCTC | 1 cut(s) | 484 |
| FaeI | CATG | 4 cut(s) | 895, 1073, 1195, 1258 |
| FaiI | YATR | 4 cut(s) | 893, 1071, 1193, 1256 |
| FaqI | GGGAC | 3 cut(s) | 148, 209, 1209 |
| FatI | CATG | 4 cut(s) | 891, 1069, 1191, 1254 |
| FauI | CCCGC | 2 cut(s) | 69, 731 |
| FblI | GTMKAC | 3 cut(s) | 24, 504, 1044 |
| FokI | GGATG | 3 cut(s) | 188, 607, 620 |
| FriOI | GRGCYC | 5 cut(s) | 261, 411, 711, 972, 1264 |
| FspBI | CTAG | 1 cut(s) | 665 |
| GlaI | GCGC | 7 cut(s) | 56, 265, 293, 338, 472, 523, 618 |
| GsaI | CCCAGC | 3 cut(s) | 37, 751, 1191 |
| GsuI | CTGGAG | 3 cut(s) | 466, 574, 1175 |
| HaeII | RGCGCY | 4 cut(s) | 295, 340, 474, 525 |
| HaeIII | GGCC | 9 cut(s) | 123, 587, 651, 746, 818, 828, 911, 1052, 1186 |
| HapII | CCGG | 7 cut(s) | 404, 544, 859, 899, 915, 1175, 1269 |
| HgaI | GACGC | 6 cut(s) | 35, 368, 466, 907, 934, 1206 |
| HhaI | GCGC | 7 cut(s) | 57, 266, 294, 339, 473, 524, 619 |
| Hin1I | GRCGYC | 5 cut(s) | 27, 360, 471, 522, 918 |
| Hin1II | CATG | 4 cut(s) | 895, 1073, 1195, 1258 |
| Hin6I | GCGC | 7 cut(s) | 55, 264, 292, 337, 471, 522, 617 |
| HinP1I | GCGC | 7 cut(s) | 55, 264, 292, 337, 471, 522, 617 |
| HincII | GTYRAC | 4 cut(s) | 25, 189, 1045, 1140 |
| HindII | GTYRAC | 4 cut(s) | 25, 189, 1045, 1140 |
| HindIII | AAGCTT | 1 cut(s) | 1220 |
| HinfI | GANTC | 7 cut(s) | 212, 767, 790, 1046, 1063, 1109, 1232 |
| HpaII | CCGG | 7 cut(s) | 404, 544, 859, 899, 915, 1175, 1269 |
| HphI | GGTGA | 4 cut(s) | 448, 694, 892, 1031 |
| Hpy188I | TCNGA | 6 cut(s) | 256, 808, 937, 1031, 1080, 1249 |
| Hpy188III | TCNNGA | 5 cut(s) | 544, 782, 801, 922, 1154 |
| Hpy99I | CGWCG | 4 cut(s) | 29, 824, 923, 928 |
| HpyAV | CCTTC | 3 cut(s) | 100, 818, 869 |
| HpyCH4III | ACNGT | 2 cut(s) | 571, 848 |
| HpyCH4IV | ACGT | 5 cut(s) | 581, 657, 939, 1144, 1167 |
| HpyCH4V | TGCA | 3 cut(s) | 6, 342, 598 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 61, 348, 384, 483, 525, 530, 967, 1058, 1197 |
| HpyF3I | CTNAG | 5 cut(s) | 116, 410, 499, 1079, 1131 |
| HpySE526I | ACGT | 5 cut(s) | 581, 657, 939, 1144, 1167 |
| Hsp92I | GRCGYC | 5 cut(s) | 27, 360, 471, 522, 918 |
| Hsp92II | CATG | 4 cut(s) | 895, 1073, 1195, 1258 |
| HspAI | GCGC | 7 cut(s) | 55, 264, 292, 337, 471, 522, 617 |
| KasI | GGCGCC | 2 cut(s) | 470, 521 |
| Kpn2I | TCCGGA | 1 cut(s) | 543 |
| KspI | CCGCGG | 1 cut(s) | 352 |
| Kzo9I | GATC | 5 cut(s) | 237, 600, 610, 803, 1177 |
| LmnI | GCTCC | 5 cut(s) | 406, 468, 967, 975, 1267 |
| Lsp1109I | GCAGC | 6 cut(s) | 326, 450, 545, 702, 867, 1045 |
| LweI | GCATC | 1 cut(s) | 585 |
| MaeI | CTAG | 1 cut(s) | 665 |
| MaeII | ACGT | 5 cut(s) | 581, 657, 939, 1144, 1167 |
| MaeIII | GTNAC | 1 cut(s) | 700 |
| MalI | GATC | 5 cut(s) | 239, 602, 612, 805, 1179 |
| MboI | GATC | 5 cut(s) | 237, 600, 610, 803, 1177 |
| MboII | GAAGA | 2 cut(s) | 78, 171 |
| MfeI | CAATTG | 1 cut(s) | 65 |
| MflI | RGATCY | 1 cut(s) | 610 |
| MhlI | GDGCHC | 6 cut(s) | 261, 411, 711, 963, 972, 1264 |
| MluCI | AATT | 4 cut(s) | 65, 380, 562, 839 |
| MluI | ACGCGT | 3 cut(s) | 492, 945, 1198 |
| Mly113I | GGCGCC | 2 cut(s) | 471, 522 |
| MlyI | GAGTC | 4 cut(s) | 206, 1040, 1103, 1241 |
| MmeI | TCCRAC | 4 cut(s) | 132, 397, 1272, 1289 |
| MroI | TCCGGA | 1 cut(s) | 543 |
| MseI | TTAA | 1 cut(s) | 390 |
| MspA1I | CMGCKG | 2 cut(s) | 351, 519 |
| MspI | CCGG | 7 cut(s) | 404, 544, 859, 899, 915, 1175, 1269 |
| MspR9I | CCNGG | 7 cut(s) | 334, 404, 530, 592, 1055, 1087, 1175 |
| MunI | CAATTG | 1 cut(s) | 65 |
| MvaI | CCWGG | 5 cut(s) | 334, 530, 592, 1055, 1087 |
| MvnI | CGCG | 7 cut(s) | 351, 387, 494, 617, 923, 947, 1200 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 61, 348, 384, 483, 525, 530, 967, 1058, 1197 |
| NarI | GGCGCC | 2 cut(s) | 471, 522 |
| NciI | CCSGG | 2 cut(s) | 404, 1175 |
| NdeII | GATC | 5 cut(s) | 237, 600, 610, 803, 1177 |
| NlaIII | CATG | 4 cut(s) | 895, 1073, 1195, 1258 |
| NlaIV | GGNNCC | 5 cut(s) | 472, 523, 548, 829, 1173 |
| NmeAIII | GCCGAG | 3 cut(s) | 31, 447, 1028 |
| NmuCI | GTSAC | 1 cut(s) | 700 |
| NotI | GCGGCCGC | 1 cut(s) | 121 |
| NruI | TCGCGA | 1 cut(s) | 923 |
| NspI | RCATGY | 1 cut(s) | 895 |
| NspV | TTCGAA | 1 cut(s) | 873 |
| PceI | AGGCCT | 1 cut(s) | 911 |
| PciI | ACATGT | 1 cut(s) | 891 |
| PcsI | WCGNNNNNNNCGW | 6 cut(s) | 252, 474, 819, 828, 951, 1289 |
| PfeI | GAWTC | 3 cut(s) | 767, 790, 1063 |
| PflFI | GACNNNGTC | 1 cut(s) | 362 |
| PfoI | TCCNGGA | 1 cut(s) | 590 |
| PinAI | ACCGGT | 1 cut(s) | 1268 |
| PleI | GAGTC | 4 cut(s) | 206, 1040, 1103, 1240 |
| PluTI | GGCGCC | 2 cut(s) | 474, 525 |
| PmaCI | CACGTG | 2 cut(s) | 582, 1168 |
| PmlI | CACGTG | 2 cut(s) | 582, 1168 |
| PpsI | GAGTC | 4 cut(s) | 206, 1040, 1103, 1240 |
| Ppu21I | YACGTR | 2 cut(s) | 582, 1168 |
| PpuMI | RGGWCCY | 1 cut(s) | 1083 |
| PscI | ACATGT | 1 cut(s) | 891 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1201 |
| Psp124BI | GAGCTC | 4 cut(s) | 261, 411, 972, 1264 |
| Psp5II | RGGWCCY | 1 cut(s) | 1083 |
| Psp6I | CCWGG | 5 cut(s) | 332, 528, 590, 1053, 1085 |
| PspCI | CACGTG | 2 cut(s) | 582, 1168 |
| PspEI | GGTNACC | 1 cut(s) | 700 |
| PspFI | CCCAGC | 3 cut(s) | 33, 747, 1187 |
| PspGI | CCWGG | 5 cut(s) | 332, 528, 590, 1053, 1085 |
| PspN4I | GGNNCC | 5 cut(s) | 472, 523, 548, 829, 1173 |
| PspPPI | RGGWCCY | 1 cut(s) | 1083 |
| PstNI | CAGNNNCTG | 1 cut(s) | 625 |
| PsuI | RGATCY | 1 cut(s) | 610 |
| PsyI | GACNNNGTC | 1 cut(s) | 362 |
| RruI | TCGCGA | 1 cut(s) | 923 |
| RsaI | GTAC | 6 cut(s) | 773, 850, 890, 944, 998, 1164 |
| RsaNI | GTAC | 6 cut(s) | 772, 849, 889, 943, 997, 1163 |
| SacI | GAGCTC | 4 cut(s) | 261, 411, 972, 1264 |
| SacII | CCGCGG | 1 cut(s) | 352 |
| SalI | GTCGAC | 2 cut(s) | 23, 1043 |
| SaqAI | TTAA | 1 cut(s) | 390 |
| Sau3AI | GATC | 5 cut(s) | 237, 600, 610, 803, 1177 |
| SchI | GAGTC | 4 cut(s) | 206, 1040, 1103, 1241 |
| ScrFI | CCNGG | 7 cut(s) | 334, 404, 530, 592, 1055, 1087, 1175 |
| SduI | GDGCHC | 6 cut(s) | 261, 411, 711, 963, 972, 1264 |
| SfaNI | GCATC | 1 cut(s) | 585 |
| SfoI | GGCGCC | 2 cut(s) | 472, 523 |
| Sfr303I | CCGCGG | 1 cut(s) | 352 |
| SfuI | TTCGAA | 1 cut(s) | 873 |
| SgrBI | CCGCGG | 1 cut(s) | 352 |
| SinI | GGWCC | 4 cut(s) | 571, 1083, 1171, 1245 |
| SmlI | CTYRAG | 2 cut(s) | 139, 1103 |
| SmoI | CTYRAG | 2 cut(s) | 139, 1103 |
| Sse9I | AATT | 4 cut(s) | 65, 380, 562, 839 |
| SseBI | AGGCCT | 1 cut(s) | 911 |
| SspDI | GGCGCC | 2 cut(s) | 470, 521 |
| SspMI | CTAG | 1 cut(s) | 665 |
| SstI | GAGCTC | 4 cut(s) | 261, 411, 972, 1264 |
| StuI | AGGCCT | 1 cut(s) | 911 |
| StyD4I | CCNGG | 7 cut(s) | 332, 402, 528, 590, 1053, 1085, 1173 |
| TaaI | ACNGT | 2 cut(s) | 571, 848 |
| TaiI | ACGT | 5 cut(s) | 584, 660, 942, 1147, 1170 |
| TaqI | TCGA | 8 cut(s) | 24, 93, 783, 813, 822, 873, 1044, 1235 |
| TaqII | GACCGA | 2 cut(s) | 779, 1267 |
| TasI | AATT | 4 cut(s) | 65, 380, 562, 839 |
| TatI | WGTACW | 1 cut(s) | 996 |
| TauI | GCSGC | 9 cut(s) | 123, 126, 269, 354, 438, 522, 690, 746, 759 |
| TfiI | GAWTC | 3 cut(s) | 767, 790, 1063 |
| Tru1I | TTAA | 1 cut(s) | 390 |
| Tru9I | TTAA | 1 cut(s) | 390 |
| TseFI | GTSAC | 1 cut(s) | 700 |
| TseI | GCWGC | 6 cut(s) | 339, 438, 533, 690, 855, 1058 |
| Tsp45I | GTSAC | 1 cut(s) | 700 |
| TspGWI | ACGGA | 1 cut(s) | 623 |
| Tth111I | GACNNNGTC | 1 cut(s) | 362 |
| VpaK11BI | GGWCC | 4 cut(s) | 571, 1083, 1171, 1245 |
| XapI | RAATTY | 1 cut(s) | 380 |
| XceI | RCATGY | 1 cut(s) | 895 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1225 |
| XmiI | GTMKAC | 3 cut(s) | 24, 504, 1044 |
| XspI | CTAG | 1 cut(s) | 665 |