lysM domain receptor-like kinase 3
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G57120 |
| fragaria_vesca | FvH4_3g31560 FvH4_7g19030 |
| malus_domestica | MD01G1105700.v1.1 MD03G1123700.v1.1 MD07G1172200.v1.1 MD12G1106300.v1.1 |
| prunus_persica | Prupe.2G211100_v2.0.a1 Prupe.6G106100_v2.0.a1 |
| pyrus_communis | pycom01g13250 pycom07g16650 pycom17g07150 |
| rosa_chinensis | RchiOBHm_Chr1g0362941 RchiOBHm_Chr5g0058201 |
| rosa_laevigata | RLG00000027610 RLG00000035203 |
| rosa_multiflora | Rmu_sc0000367.1_g000042 Rmu_sc0019019.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00022330 Rroxscaffold_4G00293630 |
| rosa_rugosa | Rorug01G0302200 Rorug05G0312700 |
| rosa_samantha | Rh1AG311800 Rh1BG274900 Rh1CG292100 Rh1DG305600 Rh5BG391900 Rh5CG415800 Rh5DG406400 |
| rosa_wichuraiana | Rw1G027630 Rw5G035840 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 332, 539 |
| Acc36I | ACCTGC | 1 cut(s) | 559 |
| AccB1I | GGYRCC | 1 cut(s) | 437 |
| AccI | GTMKAC | 2 cut(s) | 9, 548 |
| AccII | CGCG | 4 cut(s) | 243, 318, 990, 1173 |
| AclWI | GGATC | 2 cut(s) | 58, 71 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AcsI | RAATTY | 2 cut(s) | 476, 1245 |
| AcvI | CACGTG | 2 cut(s) | 1118, 1141 |
| AcyI | GRCGYC | 3 cut(s) | 12, 438, 891 |
| AfaI | GTAC | 4 cut(s) | 863, 917, 971, 1137 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 466, 589, 847, 1166, 1215 |
| AflIII | ACRYGT | 6 cut(s) | 864, 912, 1115, 1117, 1138, 1171 |
| AgsI | TTSAA | 2 cut(s) | 967, 1251 |
| AjiI | CACGTC | 1 cut(s) | 913 |
| AjnI | CCWGG | 1 cut(s) | 582 |
| AleI | CACNNNNGTG | 1 cut(s) | 635 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 374, 406 |
| AluBI | AGCT | 7 cut(s) | 138, 145, 189, 361, 430, 943, 1111 |
| AluI | AGCT | 7 cut(s) | 138, 145, 189, 361, 430, 943, 1111 |
| Alw21I | GWGCWC | 1 cut(s) | 642 |
| Alw26I | GTCTC | 2 cut(s) | 451, 562 |
| Alw44I | GTGCAC | 1 cut(s) | 638 |
| AlwI | GGATC | 2 cut(s) | 58, 71 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 595, 699 |
| Ama87I | CYCGRG | 1 cut(s) | 1026 |
| AoxI | GGCC | 5 cut(s) | 3, 109, 714, 732, 835 |
| ApaI | GGGCCC | 1 cut(s) | 839 |
| ApaLI | GTGCAC | 1 cut(s) | 638 |
| ApeKI | GCWGC | 5 cut(s) | 186, 306, 405, 657, 660 |
| ApoI | RAATTY | 2 cut(s) | 476, 1245 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 315, 347 |
| AspLEI | GCGC | 5 cut(s) | 245, 273, 306, 440, 1126 |
| AspS9I | GGNCC | 6 cut(s) | 110, 715, 835, 836, 1144, 1262 |
| AsuC2I | CCSGG | 4 cut(s) | 61, 206, 1148, 1210 |
| AsuHPI | GGTGA | 8 cut(s) | 24, 76, 268, 529, 664, 788, 943, 1004 |
| AsuII | TTCGAA | 1 cut(s) | 758 |
| AvaI | CYCGRG | 1 cut(s) | 1026 |
| AvaII | GGWCC | 2 cut(s) | 1144, 1262 |
| BaeGI | GKGCMC | 2 cut(s) | 642, 839 |
| BamHI | GGATCC | 1 cut(s) | 63 |
| BanI | GGYRCC | 1 cut(s) | 437 |
| BanII | GRGCYC | 2 cut(s) | 821, 839 |
| BauI | CACGAG | 1 cut(s) | 298 |
| BbrPI | CACGTG | 2 cut(s) | 1118, 1141 |
| BbsI | GAAGAC | 1 cut(s) | 328 |
| Bbv12I | GWGCWC | 1 cut(s) | 642 |
| BbvI | GCAGC | 5 cut(s) | 198, 293, 417, 669, 672 |
| BccI | CCATC | 3 cut(s) | 428, 745, 1057 |
| BceAI | ACGGC | 3 cut(s) | 729, 946, 1019 |
| BciT130I | CCWGG | 1 cut(s) | 584 |
| BcnI | CCSGG | 4 cut(s) | 61, 206, 1148, 1210 |
| BcoDI | GTCTC | 2 cut(s) | 451, 562 |
| BfaI | CTAG | 1 cut(s) | 681 |
| BfoI | RGCGCY | 4 cut(s) | 274, 307, 441, 1127 |
| BfuAI | ACCTGC | 1 cut(s) | 559 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 584 |
| BglII | AGATCT | 1 cut(s) | 1185 |
| Bme1390I | CCNGG | 5 cut(s) | 61, 206, 584, 1148, 1210 |
| Bme18I | GGWCC | 2 cut(s) | 1144, 1262 |
| BmeT110I | CYCGRG | 1 cut(s) | 1026 |
| BmgBI | CACGTC | 1 cut(s) | 913 |
| BmgT120I | GGNCC | 6 cut(s) | 110, 715, 835, 836, 1144, 1262 |
| BmiI | GGNNCC | 9 cut(s) | 65, 112, 439, 818, 836, 837, 838, 960, 1146 |
| BmrFI | CCNGG | 5 cut(s) | 61, 206, 584, 1148, 1210 |
| BmrI | ACTGGG | 1 cut(s) | 712 |
| BmsI | GCATC | 1 cut(s) | 657 |
| BmuI | ACTGGG | 1 cut(s) | 712 |
| BoxI | GACNNNNGTC | 1 cut(s) | 554 |
| BpiI | GAAGAC | 1 cut(s) | 328 |
| BpmI | CTGGAG | 5 cut(s) | 151, 274, 544, 959, 1148 |
| Bpu14I | TTCGAA | 1 cut(s) | 758 |
| BpuEI | CTTGAG | 1 cut(s) | 362 |
| BpuMI | CCSGG | 4 cut(s) | 61, 206, 1148, 1210 |
| BsaAI | YACGTR | 2 cut(s) | 1118, 1141 |
| BsaHI | GRCGYC | 3 cut(s) | 12, 438, 891 |
| BsaI | GGTCTC | 1 cut(s) | 562 |
| BsaJI | CCNNGG | 4 cut(s) | 181, 316, 433, 988 |
| BsaWI | WCCGGW | 2 cut(s) | 1090, 1241 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 466, 589, 847, 1166, 1215 |
| Bse118I | RCCGGY | 1 cut(s) | 773 |
| Bse1I | ACTGG | 2 cut(s) | 600, 718 |
| BseBI | CCWGG | 1 cut(s) | 584 |
| BseDI | CCNNGG | 4 cut(s) | 181, 316, 433, 988 |
| BseGI | GGATG | 3 cut(s) | 176, 1068, 1080 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 466, 589, 847, 1166, 1215 |
| BseNI | ACTGG | 2 cut(s) | 600, 718 |
| BseSI | GKGCMC | 2 cut(s) | 642, 839 |
| BseXI | GCAGC | 5 cut(s) | 198, 293, 417, 669, 672 |
| BseYI | CCCAGC | 2 cut(s) | 18, 1160 |
| BsgI | GTGCAG | 1 cut(s) | 292 |
| Bsh1236I | CGCG | 4 cut(s) | 243, 318, 990, 1173 |
| BshFI | GGCC | 5 cut(s) | 5, 111, 716, 734, 837 |
| BshNI | GGYRCC | 1 cut(s) | 437 |
| BsiHKAI | GWGCWC | 1 cut(s) | 642 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1026 |
| BslFI | GGGAC | 4 cut(s) | 606, 724, 864, 1182 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 466, 589, 847, 1166, 1215 |
| BsmAI | GTCTC | 2 cut(s) | 451, 562 |
| BsmBI | CGTCTC | 1 cut(s) | 451 |
| BsmFI | GGGAC | 4 cut(s) | 606, 724, 864, 1182 |
| BsmI | GAATGC | 2 cut(s) | 570, 920 |
| BsnI | GGCC | 5 cut(s) | 5, 111, 716, 734, 837 |
| Bso31I | GGTCTC | 1 cut(s) | 562 |
| BsoBI | CYCGRG | 1 cut(s) | 1026 |
| Bsp119I | TTCGAA | 1 cut(s) | 758 |
| Bsp120I | GGGCCC | 1 cut(s) | 835 |
| Bsp1286I | GDGCHC | 3 cut(s) | 642, 821, 839 |
| Bsp143I | GATC | 3 cut(s) | 63, 780, 1185 |
| BspANI | GGCC | 5 cut(s) | 5, 111, 716, 734, 837 |
| BspFNI | CGCG | 4 cut(s) | 243, 318, 990, 1173 |
| BspLI | GGNNCC | 9 cut(s) | 65, 112, 439, 818, 836, 837, 838, 960, 1146 |
| BspMI | ACCTGC | 1 cut(s) | 559 |
| BspPI | GGATC | 2 cut(s) | 58, 71 |
| BspT104I | TTCGAA | 1 cut(s) | 758 |
| BspT107I | GGYRCC | 1 cut(s) | 437 |
| BspTNI | GGTCTC | 1 cut(s) | 562 |
| BsrFI | RCCGGY | 1 cut(s) | 773 |
| BsrI | ACTGG | 2 cut(s) | 600, 718 |
| BssAI | RCCGGY | 1 cut(s) | 773 |
| BssECI | CCNNGG | 4 cut(s) | 181, 316, 433, 988 |
| BssMI | GATC | 3 cut(s) | 63, 780, 1185 |
| BssNI | GRCGYC | 3 cut(s) | 12, 438, 891 |
| BssSI | CACGAG | 1 cut(s) | 298 |
| BssT1I | CCWWGG | 1 cut(s) | 433 |
| Bst2BI | CACGAG | 1 cut(s) | 298 |
| Bst2UI | CCWGG | 1 cut(s) | 584 |
| Bst4CI | ACNGT | 3 cut(s) | 331, 541, 1012 |
| BstACI | GRCGYC | 3 cut(s) | 12, 438, 891 |
| BstBAI | YACGTR | 2 cut(s) | 1118, 1141 |
| BstBI | TTCGAA | 1 cut(s) | 758 |
| BstC8I | GCNNGC | 3 cut(s) | 359, 496, 1042 |
| BstDSI | CCRYGG | 2 cut(s) | 316, 988 |
| BstEII | GGTNACC | 1 cut(s) | 670 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 587 |
| BstF5I | GGATG | 3 cut(s) | 176, 1068, 1080 |
| BstFNI | CGCG | 4 cut(s) | 243, 318, 990, 1173 |
| BstH2I | RGCGCY | 4 cut(s) | 274, 307, 441, 1127 |
| BstHHI | GCGC | 5 cut(s) | 245, 273, 306, 440, 1126 |
| BstKTI | GATC | 3 cut(s) | 66, 783, 1188 |
| BstMAI | GTCTC | 2 cut(s) | 451, 562 |
| BstMBI | GATC | 3 cut(s) | 63, 780, 1185 |
| BstNI | CCWGG | 1 cut(s) | 584 |
| BstNSI | RCATGY | 1 cut(s) | 868 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 554 |
| BstPI | GGTNACC | 1 cut(s) | 670 |
| BstSCI | CCNGG | 5 cut(s) | 59, 204, 582, 1146, 1208 |
| BstSLI | GKGCMC | 2 cut(s) | 642, 839 |
| BstUI | CGCG | 4 cut(s) | 243, 318, 990, 1173 |
| BstV1I | GCAGC | 5 cut(s) | 198, 293, 417, 669, 672 |
| BstV2I | GAAGAC | 1 cut(s) | 328 |
| BstX2I | RGATCY | 2 cut(s) | 63, 1185 |
| BstYI | RGATCY | 2 cut(s) | 63, 1185 |
| BsuRI | GGCC | 5 cut(s) | 5, 111, 716, 734, 837 |
| BtgI | CCRYGG | 2 cut(s) | 316, 988 |
| BtrI | CACGTC | 1 cut(s) | 913 |
| BtsCI | GGATG | 3 cut(s) | 176, 1068, 1080 |
| BtsIMutI | CAGTG | 1 cut(s) | 799 |
| BveI | ACCTGC | 1 cut(s) | 559 |
| Cac8I | GCNNGC | 3 cut(s) | 359, 496, 1042 |
| CaiI | CAGNNNCTG | 2 cut(s) | 595, 699 |
| CfoI | GCGC | 5 cut(s) | 245, 273, 306, 440, 1126 |
| Cfr10I | RCCGGY | 1 cut(s) | 773 |
| Cfr13I | GGNCC | 6 cut(s) | 110, 715, 835, 836, 1144, 1262 |
| Cfr42I | CCGCGG | 2 cut(s) | 319, 991 |
| CseI | GACGC | 4 cut(s) | 20, 652, 880, 1179 |
| Csp6I | GTAC | 4 cut(s) | 862, 916, 970, 1136 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 997, 1032 |
| CviAII | CATG | 3 cut(s) | 394, 865, 1165 |
| CviQI | GTAC | 4 cut(s) | 862, 916, 970, 1136 |
| DinI | GGCGCC | 1 cut(s) | 439 |
| DpnI | GATC | 3 cut(s) | 65, 782, 1187 |
| DpnII | GATC | 3 cut(s) | 63, 780, 1185 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 332, 539 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 332, 539 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| EciI | GGCGGA | 4 cut(s) | 182, 341, 481, 1012 |
| Eco130I | CCWWGG | 1 cut(s) | 433 |
| Eco24I | GRGCYC | 2 cut(s) | 821, 839 |
| Eco31I | GGTCTC | 1 cut(s) | 562 |
| Eco47I | GGWCC | 2 cut(s) | 1144, 1262 |
| Eco72I | CACGTG | 2 cut(s) | 1118, 1141 |
| Eco88I | CYCGRG | 1 cut(s) | 1026 |
| Eco91I | GGTNACC | 1 cut(s) | 670 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 587 |
| EcoO109I | RGGNCCY | 2 cut(s) | 835, 836 |
| EcoO65I | GGTNACC | 1 cut(s) | 670 |
| EcoRI | GAATTC | 1 cut(s) | 476 |
| EcoRII | CCWGG | 1 cut(s) | 582 |
| EcoT14I | CCWWGG | 1 cut(s) | 433 |
| EcoT38I | GRGCYC | 2 cut(s) | 821, 839 |
| EgeI | GGCGCC | 1 cut(s) | 439 |
| EheI | GGCGCC | 1 cut(s) | 439 |
| ErhI | CCWWGG | 1 cut(s) | 433 |
| Esp3I | CGTCTC | 1 cut(s) | 451 |
| FaeI | CATG | 3 cut(s) | 397, 868, 1168 |
| FaiI | YATR | 4 cut(s) | 395, 744, 866, 1166 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1184, 1216 |
| FaqI | GGGAC | 4 cut(s) | 606, 724, 864, 1182 |
| FatI | CATG | 3 cut(s) | 393, 864, 1164 |
| FauI | CCCGC | 2 cut(s) | 995, 1171 |
| FblI | GTMKAC | 2 cut(s) | 9, 548 |
| FokI | GGATG | 3 cut(s) | 163, 1075, 1087 |
| FriOI | GRGCYC | 2 cut(s) | 821, 839 |
| FspBI | CTAG | 1 cut(s) | 681 |
| GlaI | GCGC | 5 cut(s) | 244, 272, 305, 439, 1125 |
| GsaI | CCCAGC | 2 cut(s) | 22, 1164 |
| GsuI | CTGGAG | 5 cut(s) | 151, 274, 544, 959, 1148 |
| HaeII | RGCGCY | 4 cut(s) | 274, 307, 441, 1127 |
| HaeIII | GGCC | 5 cut(s) | 5, 111, 716, 734, 837 |
| HgaI | GACGC | 4 cut(s) | 20, 652, 880, 1179 |
| HhaI | GCGC | 5 cut(s) | 245, 273, 306, 440, 1126 |
| Hin1I | GRCGYC | 3 cut(s) | 12, 438, 891 |
| Hin1II | CATG | 3 cut(s) | 397, 868, 1168 |
| Hin6I | GCGC | 5 cut(s) | 243, 271, 304, 438, 1124 |
| HinP1I | GCGC | 5 cut(s) | 243, 271, 304, 438, 1124 |
| HincII | GTYRAC | 3 cut(s) | 10, 549, 1018 |
| HindII | GTYRAC | 3 cut(s) | 10, 549, 1018 |
| HinfI | GANTC | 7 cut(s) | 53, 696, 755, 934, 1019, 1082, 1205 |
| HphI | GGTGA | 8 cut(s) | 24, 76, 268, 529, 664, 788, 943, 1004 |
| Hpy166II | GTNNAC | 9 cut(s) | 10, 472, 549, 607, 640, 916, 1018, 1138, 1144 |
| Hpy188I | TCNGA | 7 cut(s) | 52, 235, 816, 882, 910, 1222, 1266 |
| Hpy188III | TCNNGA | 6 cut(s) | 67, 379, 561, 709, 938, 956 |
| Hpy8I | GTNNAC | 9 cut(s) | 10, 472, 549, 607, 640, 916, 1018, 1138, 1144 |
| Hpy99I | CGWCG | 6 cut(s) | 11, 14, 335, 896, 914, 1040 |
| HpyAV | CCTTC | 2 cut(s) | 91, 1072 |
| HpyCH4III | ACNGT | 3 cut(s) | 331, 541, 1012 |
| HpyCH4IV | ACGT | 4 cut(s) | 603, 912, 1117, 1140 |
| HpyCH4V | TGCA | 4 cut(s) | 309, 568, 640, 687 |
| HpySE526I | ACGT | 4 cut(s) | 603, 912, 1117, 1140 |
| Hsp92I | GRCGYC | 3 cut(s) | 12, 438, 891 |
| Hsp92II | CATG | 3 cut(s) | 397, 868, 1168 |
| HspAI | GCGC | 5 cut(s) | 243, 271, 304, 438, 1124 |
| KasI | GGCGCC | 1 cut(s) | 437 |
| KspI | CCGCGG | 2 cut(s) | 319, 991 |
| Kzo9I | GATC | 3 cut(s) | 63, 780, 1185 |
| LmnI | GCTCC | 5 cut(s) | 366, 435, 816, 940, 958 |
| Lsp1109I | GCAGC | 5 cut(s) | 198, 293, 417, 669, 672 |
| LweI | GCATC | 1 cut(s) | 657 |
| MaeI | CTAG | 1 cut(s) | 681 |
| MaeII | ACGT | 4 cut(s) | 603, 912, 1117, 1140 |
| MaeIII | GTNAC | 1 cut(s) | 670 |
| MalI | GATC | 3 cut(s) | 65, 782, 1187 |
| MboI | GATC | 3 cut(s) | 63, 780, 1185 |
| MboII | GAAGA | 2 cut(s) | 328, 1195 |
| MflI | RGATCY | 2 cut(s) | 63, 1185 |
| MhlI | GDGCHC | 3 cut(s) | 642, 821, 839 |
| MluCI | AATT | 3 cut(s) | 476, 842, 1245 |
| MluI | ACGCGT | 1 cut(s) | 1171 |
| Mly113I | GGCGCC | 1 cut(s) | 438 |
| MlyI | GAGTC | 2 cut(s) | 1013, 1076 |
| MmeI | TCCRAC | 4 cut(s) | 364, 794, 933, 1200 |
| MslI | CAYNNNNRTG | 1 cut(s) | 635 |
| MspA1I | CMGCKG | 4 cut(s) | 318, 888, 990, 1044 |
| MspR9I | CCNGG | 5 cut(s) | 61, 206, 584, 1148, 1210 |
| Mva1269I | GAATGC | 2 cut(s) | 570, 920 |
| MvaI | CCWGG | 1 cut(s) | 584 |
| MvnI | CGCG | 4 cut(s) | 243, 318, 990, 1173 |
| NarI | GGCGCC | 1 cut(s) | 438 |
| NciI | CCSGG | 4 cut(s) | 61, 206, 1148, 1210 |
| NdeII | GATC | 3 cut(s) | 63, 780, 1185 |
| NlaIII | CATG | 3 cut(s) | 397, 868, 1168 |
| NlaIV | GGNNCC | 9 cut(s) | 65, 112, 439, 818, 836, 837, 838, 960, 1146 |
| NmeAIII | GCCGAG | 2 cut(s) | 162, 1129 |
| NmuCI | GTSAC | 1 cut(s) | 670 |
| NspI | RCATGY | 1 cut(s) | 868 |
| NspV | TTCGAA | 1 cut(s) | 758 |
| OliI | CACNNNNGTG | 1 cut(s) | 635 |
| PciI | ACATGT | 1 cut(s) | 864 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 231, 1262 |
| PctI | GAATGC | 2 cut(s) | 570, 920 |
| PfeI | GAWTC | 5 cut(s) | 53, 696, 755, 934, 1205 |
| PflFI | GACNNNGTC | 2 cut(s) | 329, 1216 |
| PfoI | TCCNGGA | 2 cut(s) | 204, 1208 |
| PleI | GAGTC | 2 cut(s) | 1013, 1076 |
| PluTI | GGCGCC | 1 cut(s) | 441 |
| PmaCI | CACGTG | 2 cut(s) | 1118, 1141 |
| PmlI | CACGTG | 2 cut(s) | 1118, 1141 |
| PpsI | GAGTC | 2 cut(s) | 1013, 1076 |
| Ppu21I | YACGTR | 2 cut(s) | 1118, 1141 |
| PscI | ACATGT | 1 cut(s) | 864 |
| PshAI | GACNNNNGTC | 1 cut(s) | 554 |
| Psp6I | CCWGG | 1 cut(s) | 582 |
| PspCI | CACGTG | 2 cut(s) | 1118, 1141 |
| PspEI | GGTNACC | 1 cut(s) | 670 |
| PspFI | CCCAGC | 2 cut(s) | 18, 1160 |
| PspGI | CCWGG | 1 cut(s) | 582 |
| PspN4I | GGNNCC | 9 cut(s) | 65, 112, 439, 818, 836, 837, 838, 960, 1146 |
| PspOMI | GGGCCC | 1 cut(s) | 835 |
| PspPI | GGNCC | 6 cut(s) | 110, 715, 835, 836, 1144, 1262 |
| PstNI | CAGNNNCTG | 2 cut(s) | 595, 699 |
| PsuI | RGATCY | 2 cut(s) | 63, 1185 |
| PsyI | GACNNNGTC | 2 cut(s) | 329, 1216 |
| RsaI | GTAC | 4 cut(s) | 863, 917, 971, 1137 |
| RsaNI | GTAC | 4 cut(s) | 862, 916, 970, 1136 |
| RseI | CAYNNNNRTG | 1 cut(s) | 635 |
| SacII | CCGCGG | 2 cut(s) | 319, 991 |
| SalI | GTCGAC | 2 cut(s) | 8, 547 |
| Sau3AI | GATC | 3 cut(s) | 63, 780, 1185 |
| Sau96I | GGNCC | 6 cut(s) | 110, 715, 835, 836, 1144, 1262 |
| SchI | GAGTC | 2 cut(s) | 1013, 1076 |
| ScrFI | CCNGG | 5 cut(s) | 61, 206, 584, 1148, 1210 |
| SduI | GDGCHC | 3 cut(s) | 642, 821, 839 |
| SfaNI | GCATC | 1 cut(s) | 657 |
| SfoI | GGCGCC | 1 cut(s) | 439 |
| Sfr303I | CCGCGG | 2 cut(s) | 319, 991 |
| SfuI | TTCGAA | 1 cut(s) | 758 |
| SgrBI | CCGCGG | 2 cut(s) | 319, 991 |
| SgrDI | CGTCGACG | 1 cut(s) | 8 |
| SinI | GGWCC | 2 cut(s) | 1144, 1262 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 635 |
| SmlI | CTYRAG | 1 cut(s) | 377 |
| SmoI | CTYRAG | 1 cut(s) | 377 |
| Sse9I | AATT | 3 cut(s) | 476, 842, 1245 |
| SspDI | GGCGCC | 1 cut(s) | 437 |
| SspMI | CTAG | 1 cut(s) | 681 |
| StyD4I | CCNGG | 5 cut(s) | 59, 204, 582, 1146, 1208 |
| StyI | CCWWGG | 1 cut(s) | 433 |
| TaaI | ACNGT | 3 cut(s) | 331, 541, 1012 |
| TaiI | ACGT | 4 cut(s) | 606, 915, 1120, 1143 |
| TaqI | TCGA | 7 cut(s) | 9, 37, 548, 758, 827, 846, 978 |
| TasI | AATT | 3 cut(s) | 476, 842, 1245 |
| TatI | WGTACW | 1 cut(s) | 969 |
| TfiI | GAWTC | 5 cut(s) | 53, 696, 755, 934, 1205 |
| TscAI | CASTG | 1 cut(s) | 799 |
| TseFI | GTSAC | 1 cut(s) | 670 |
| TseI | GCWGC | 5 cut(s) | 186, 306, 405, 657, 660 |
| Tsp45I | GTSAC | 1 cut(s) | 670 |
| TspDTI | ATGAA | 1 cut(s) | 1091 |
| TspGWI | ACGGA | 1 cut(s) | 433 |
| TspRI | CASTG | 1 cut(s) | 799 |
| Tth111I | GACNNNGTC | 2 cut(s) | 329, 1216 |
| VneI | GTGCAC | 1 cut(s) | 638 |
| VpaK11BI | GGWCC | 2 cut(s) | 1144, 1262 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 587 |
| XapI | RAATTY | 2 cut(s) | 476, 1245 |
| XceI | RCATGY | 1 cut(s) | 868 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1198 |
| XmiI | GTMKAC | 2 cut(s) | 9, 548 |
| XspI | CTAG | 1 cut(s) | 681 |