AT4G01810

transport

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0005145
Physical Location & Seq
Reverse (-)
776414 .. 780355
3942 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G01810.1

Sequence Viewer

Length: 2643 bp
ATGGCTAACTTACCGAAATCGTCGGTTAATTACCCGGGAACTCTCACTCCTCTAGAGCCAAATAGGCCATCACCACAGCCAGATAGAACCCCGGTCCCTCATTCTCCTCCAGTAGTAGCTTCACCTATACCTCCTAGGTTTCCTCAACCAAGTTTTAGACCAGATCAGATGTCTTCACCGTCGATGAAATCCCCAAGTTTGTTGTCACCTGCGAATGGTATCAGAACCGGAAGTCCCATTCCTCGCTTGAGTACTCCGCCTGGTCCTCCTGTCTTTAATACTCCGGTTAAACCAGCTGCTGTGCCTTTCCGTACCTCTCCAGCTACTCCTCAGCCTATGGCATACTCTTCAGCTAATTCTTCTCTGCCCGTATCTACACCTTCCTTTTACTCAAACGGGTCATCTGTTGGATCTCAGCGTGATCTTCCAGATGTTGTTAGAATGGAAGAACCAATAGCTGCAGACTCACCTTATGTTTTGTTTTCAGCAAATAAGGTTTTAAAGCAGAAGAAGCTAGCAAATGTTGCTAGCTTGGGGTTTGGAGCAATAGTTTCTGCTGGGAGGGAGATTAGTCCTGGTCCTCAGATTATCCAACGTGATCCACATCGCTGTTTGAACTGTGGAGCATATTCAAATCCCTATAGCTCCATATTAATTGGCTCAGGCCAATGGCAGTGTGTCATCTGCGAGAACATGAATGGAAGTAAAGGTGAATATGTGGCTTCGAGCAAGAATGAGTTGCAAAACTTTCCAGAGCTTTCATTGCCTCTGGTTGATTATGTACAGACTGGAAACAAGAGACCTGGGTTTGTTCCTGCCTCTGATTCGCGGACATCTGCACCTGTCGTCCTTGTTATTGATGAGTGTTTAGATGAACCACATCTTCAGCACTTGCAGAGCTCTTTGCATGCATTTGTAGACTCGCTTCCACAAACTACCAGGCTTGGGATTATACTGTATGGTCGTACTGTTTCAATATATGATTTCTCTGAAGATTCCGTTGCTTCTGCGGATGTTATTTCTGGTGCAAAATCACCATCTGCAGAGTCGATGAAAGCGCTGATTTATGGGACCGGTGTATACTTGTCACCAATGCATGCATCACTAAAGGTAGCGCATGAGATATTCTCGTCCTTAAGACCATACACATTGAATGTACCTGAAGCCTCTAGAGATAGGTGCCTTGGAACTGCCGTTGAGGCTGCTCTGGCTATAATCCAAGGACCATCAGCCGAAATGTCTCGGGGAGTGGTCAGAAGAGCAGGAGGTAACAGTAGAATCATAGTTTGCGCTGGTGGTCCCATTACATATGGTCCTGGATCGGTACCTCATTCAATGAGTCATCCAAATTATCCATATATGGAAAAGACAGCCATAAAATGGATGGAAAATTTGGGGCGTGAAGCTCACAGGCACAATACGGTCGTCGACATATTGTGCGCTGGAACTTGCCCTCTCAGAGTTCCTATCCTGCAGCCACTTGCAAAAGCTTCAGGTGGTGTTTTGGTTCTTCACGATGATTTTGGTGAAGCCTTTGGTGTGGACTTGCAGAGGGCAGCCACTAGGGCAGCAGGTTCACATGGTCTGCTTGAAGTACGATGTTCAGATGATATTCTTATAACTCAGGTGATTGGACCTGGCGAAGAAGCACATTCAGAAACTCACGAGACGTTTAAGAGTGATGCGGCTCTCTCTATTCAGATGCTGAGTGTTGAAGAAACACAAAGCTTCTCTCTCTCAATGGAGAATAAGAGGGACATCAAAAGCGATCATGTATTTTTCCAGTTTGCTTTCCATTATTCGGATGTTTATCAAGCAGATGTGTCTCGGGTAATTACGTTCAAATTGCCAACTGTTGATAGCATCTCAGCATATCTTCAGAGTGTTGAGGACGAAGCTTCTGCGGTCCTCATCTCCAAGAGAACTCTTTTATTAGCGAAAAATCAGAAGGACGCAGTCGATATGCGTGCTACAGTAGACGAAAGAATCAAAGACATTGCTTTGAAATTCGGATCACAAGTGCCAAAATCAAAGCTTTATAGCTTCCCTAAGGAACTATCATCCCTCCCAGAACTCCTCTTCCATCTTAGAAGGGGTCCTTTACTGGGAAACATCATTGGTCATGAAGATGAAAGATCGGTGCTACGAAATTTGTTTCTAAACGCATCTTTCGATCTGTCTCTTCGTATGGTAGCACCCCGTTGCTTGATGCACCAAGAAGGTGGTACATTCGAGGAACTACCAGCGTATGATCTCTCTATGCAATCAGATAAGGCTGTTATTCTTGACCATGGCACAGATGTATTTATTTGGTTGGGAGCCGAACTGTCAGCTGACGAGGTGAAGAGTGCTGCAGTCTTAGCAGCTTGCAGAACGTTAGCTGAAGAGCTAACTGAATTCCGGTTTCCAGCTCCACGTATTCTCGCATTCAAGGAAGGAAGTTCCCAAGCTAGATATTTTGTTTGCCGGCTTATACCAGCACATAAAGACCCTCCTTATGAGCAGGAAGCAAGATTTCCACAGATAAGAACATTGACGACAGAGCAAAGAATGAAACTAAAGAGTAGTTTTATAGAGTTTGATGAAGCCAGTTTCTGCGAATGGATGAGGAGTTTGAAAGTAGTGCCTCCTGAGCCCAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Gelsolin Sec23_BS Sec23_helical Sec23_trunk zf-Sec23_Sec24

Protein Analysis

880

Amino Acids

96.0

Weight (kDa)

6.36

Isoelectric Point (pI)

53.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-Sec23_Sec24 PF04810 201 - 239 5.7e-11 Sec23/Sec24 zinc finger
Sec23_trunk PF04811 283 - 512 1.6e-12 Sec23/Sec24 trunk domain
Sec23_BS PF08033 526 - 619 1.2e-14 Sec23/Sec24 beta-sandwich domain
Sec23_helical PF04815 632 - 728 1.1e-11 Sec23/Sec24 helical domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1619
AarI CACCTGC 1 cut(s) 217
Acc36I ACCTGC 2 cut(s) 217, 1562
Acc65I GGTACC 1 cut(s) 1324
AccB1I GGYRCC 2 cut(s) 1179, 1324
AccB7I CCANNNNNTGG 1 cut(s) 1380
AccI GTMKAC 4 cut(s) 918, 1080, 1428, 1977
AccII CGCG 1 cut(s) 829
AciI CCGC 5 cut(s) 257, 829, 1010, 1685, 1904
AclI AACGTT 1 cut(s) 2375
AclWI GGATC 4 cut(s) 418, 593, 1327, 2020
AcsI RAATTY 4 cut(s) 1390, 2006, 2149, 2396
AcuI CTGAAG 7 cut(s) 333, 869, 1011, 1182, 1476, 1862, 2403
AfaI GTAC 8 cut(s) 253, 313, 783, 967, 1158, 1326, 1596, 2227
AfeI AGCGCT 1 cut(s) 1059
AfiI CCNNNNNNNGG 5 cut(s) 215, 945, 1380, 1801, 2105
AflII CTTAAG 1 cut(s) 1135
AgeI ACCGGT 1 cut(s) 1073
AjnI CCWGG 7 cut(s) 259, 574, 802, 938, 1315, 1636, 2636
AloI GAACNNNNNNTCC 6 cut(s) 31, 63, 217, 249, 2064, 2096
Alw21I GWGCWC 1 cut(s) 902
Alw26I GTCTC 5 cut(s) 793, 1245, 1661, 1830, 2184
AlwI GGATC 4 cut(s) 418, 593, 1327, 2020
AlwNI CAGNNNCTG 3 cut(s) 299, 1705, 2595
Ama87I CYCGRG 3 cut(s) 34, 1242, 1827
Aor51HI AGCGCT 1 cut(s) 1059
AoxI GGCC 2 cut(s) 65, 664
ApeKI GCWGC 8 cut(s) 296, 458, 1202, 1474, 1556, 1568, 2351, 2363
ApoI RAATTY 4 cut(s) 1390, 2006, 2149, 2396
AseI ATTAAT 1 cut(s) 653
AsiGI ACCGGT 1 cut(s) 1073
Asp718I GGTACC 1 cut(s) 1324
AspA2I CCTAGG 1 cut(s) 134
AspLEI GCGC 4 cut(s) 1060, 1117, 1292, 1442
AsuC2I CCSGG 3 cut(s) 35, 36, 92
AsuNHI GCTAGC 2 cut(s) 514, 527
AvaI CYCGRG 3 cut(s) 34, 1242, 1827
AvrII CCTAGG 1 cut(s) 134
AxyI CCTNAGG 1 cut(s) 2049
BanI GGYRCC 2 cut(s) 1179, 1324
BanII GRGCYC 2 cut(s) 902, 2637
BarI GAAGNNNNNNTAC 2 cut(s) 909, 941
BauI CACGAG 1 cut(s) 1664
BbsI GAAGAC 1 cut(s) 165
Bbv12I GWGCWC 1 cut(s) 902
BbvCI CCTCAGC 1 cut(s) 330
BbvI GCAGC 8 cut(s) 283, 445, 1189, 1486, 1568, 1580, 2338, 2375
BccI CCATC 5 cut(s) 76, 1045, 1234, 1378, 2091
BceAI ACGGC 1 cut(s) 1178
BcgI CGANNNNNNTGC 4 cut(s) 1883, 1917, 1949, 1983
BciT130I CCWGG 7 cut(s) 261, 576, 804, 940, 1317, 1638, 2638
BcnI CCSGG 3 cut(s) 35, 36, 92
BcoDI GTCTC 5 cut(s) 793, 1245, 1661, 1830, 2184
BfaI CTAG 7 cut(s) 53, 135, 515, 528, 1170, 1563, 2451
BfmI CTRYAG 6 cut(s) 459, 640, 1041, 1472, 1971, 2352
BfoI RGCGCY 1 cut(s) 1061
BfrI CTTAAG 1 cut(s) 1135
BfuAI ACCTGC 2 cut(s) 217, 1562
BglI GCCNNNNNGGC 3 cut(s) 64, 1199, 1565
BisI GCNGC 9 cut(s) 297, 459, 1203, 1475, 1557, 1569, 1686, 2352, 2364
BlnI CCTAGG 1 cut(s) 134
BlsI GCNGC 9 cut(s) 298, 460, 1204, 1476, 1558, 1570, 1687, 2353, 2365
BmcAI AGTACT 1 cut(s) 253
BmeT110I CYCGRG 3 cut(s) 34, 1242, 1827
BmiI GGNNCC 7 cut(s) 96, 1072, 1181, 1300, 1326, 2097, 2320
BmrI ACTGGG 1 cut(s) 2114
BmsI GCATC 6 cut(s) 1109, 1672, 1692, 1872, 2174, 2199
BmtI GCTAGC 2 cut(s) 518, 531
BmuI ACTGGG 1 cut(s) 2114
BpiI GAAGAC 1 cut(s) 165
BplI GAGNNNNNCTC 2 cut(s) 1112, 1144
BpmI CTGGAG 2 cut(s) 93, 303
Bpu10I CCTNAGC 3 cut(s) 330, 661, 2631
BpuEI CTTGAG 1 cut(s) 268
BpuMI CCSGG 3 cut(s) 35, 36, 92
BsaAI YACGTR 1 cut(s) 2417
BsaBI GATNNNNATC 2 cut(s) 603, 1809
BsaI GGTCTC 1 cut(s) 793
BsaJI CCNNGG 8 cut(s) 34, 90, 134, 803, 1183, 1219, 2290, 2636
BsaWI WCCGGW 4 cut(s) 227, 283, 1073, 2400
BsaXI ACNNNNNCTCC 4 cut(s) 31, 61, 534, 564
Bsc4I CCNNNNNNNGG 5 cut(s) 215, 945, 1380, 1801, 2105
Bse118I RCCGGY 2 cut(s) 1073, 2466
Bse1I ACTGG 5 cut(s) 110, 793, 1783, 2109, 2589
Bse21I CCTNAGG 1 cut(s) 2049
Bse3DI GCAATG 2 cut(s) 761, 1995
Bse8I GATNNNNATC 2 cut(s) 603, 1809
BseBI CCWGG 7 cut(s) 261, 576, 804, 940, 1317, 1638, 2638
BseDI CCNNGG 8 cut(s) 34, 90, 134, 803, 1183, 1219, 2290, 2636
BseGI GGATG 6 cut(s) 1018, 1342, 1389, 1810, 2060, 2610
BseJI GATNNNNATC 2 cut(s) 603, 1809
BseLI CCNNNNNNNGG 5 cut(s) 215, 945, 1380, 1801, 2105
BseMI GCAATG 2 cut(s) 761, 1995
BseMII CTCAG 9 cut(s) 344, 428, 596, 675, 1471, 1637, 1697, 1881, 2622
BseNI ACTGG 5 cut(s) 110, 793, 1783, 2109, 2589
BseRI GAGGAG 5 cut(s) 39, 96, 318, 2066, 2623
BseXI GCAGC 8 cut(s) 283, 445, 1189, 1486, 1568, 1580, 2338, 2375
BseYI CCCAGC 1 cut(s) 557
BsgI GTGCAG 1 cut(s) 822
Bsh1236I CGCG 1 cut(s) 829
Bsh1285I CGRYCG 1 cut(s) 1425
BshFI GGCC 2 cut(s) 67, 666
BshNI GGYRCC 2 cut(s) 1179, 1324
BshTI ACCGGT 1 cut(s) 1073
BsiEI CGRYCG 1 cut(s) 1425
BsiHKAI GWGCWC 1 cut(s) 902
BsiHKCI CYCGRG 3 cut(s) 34, 1242, 1827
BsiSI CCGG 7 cut(s) 35, 92, 228, 284, 1074, 2401, 2467
BslFI GGGAC 5 cut(s) 80, 219, 1084, 1284, 1769
BslI CCNNNNNNNGG 5 cut(s) 215, 945, 1380, 1801, 2105
BsmAI GTCTC 5 cut(s) 793, 1245, 1661, 1830, 2184
BsmBI CGTCTC 1 cut(s) 1661
BsmFI GGGAC 5 cut(s) 80, 219, 1084, 1284, 1769
BsmI GAATGC 1 cut(s) 2426
BsnI GGCC 2 cut(s) 67, 666
Bso31I GGTCTC 1 cut(s) 793
BsoBI CYCGRG 3 cut(s) 34, 1242, 1827
Bsp1286I GDGCHC 2 cut(s) 902, 2637
Bsp1407I TGTACA 1 cut(s) 781
Bsp19I CCATGG 1 cut(s) 2290
BspACI CCGC 5 cut(s) 257, 829, 1010, 1685, 1904
BspANI GGCC 2 cut(s) 67, 666
BspCNI CTCAG 9 cut(s) 343, 427, 595, 674, 1470, 1636, 1698, 1880, 2623
BspFNI CGCG 1 cut(s) 829
BspHI TCATGA 1 cut(s) 2122
BspLI GGNNCC 7 cut(s) 96, 1072, 1181, 1300, 1326, 2097, 2320
BspMAI CTGCAG 4 cut(s) 463, 1045, 1476, 2356
BspMI ACCTGC 2 cut(s) 217, 1562
BspOI GCTAGC 2 cut(s) 518, 531
BspPI GGATC 4 cut(s) 418, 593, 1327, 2020
BspQI GCTCTTC 2 cut(s) 1252, 2379
BspT107I GGYRCC 2 cut(s) 1179, 1324
BspTI CTTAAG 1 cut(s) 1135
BspTNI GGTCTC 1 cut(s) 793
BsrDI GCAATG 2 cut(s) 761, 1995
BsrFI RCCGGY 2 cut(s) 1073, 2466
BsrGI TGTACA 1 cut(s) 781
BsrI ACTGG 5 cut(s) 110, 793, 1783, 2109, 2589
BssAI RCCGGY 2 cut(s) 1073, 2466
BssECI CCNNGG 8 cut(s) 34, 90, 134, 803, 1183, 1219, 2290, 2636
BssNAI GTATAC 1 cut(s) 1081
BssSI CACGAG 1 cut(s) 1664
BssT1I CCWWGG 4 cut(s) 134, 1183, 1219, 2290
Bst1107I GTATAC 1 cut(s) 1081
Bst2BI CACGAG 1 cut(s) 1664
Bst2UI CCWGG 7 cut(s) 261, 576, 804, 940, 1317, 1638, 2638
Bst4CI ACNGT 9 cut(s) 180, 620, 957, 970, 1274, 1423, 1855, 1975, 2328
Bst6I CTCTTC 6 cut(s) 352, 1252, 2084, 2187, 2339, 2379
BstAFI CTTAAG 1 cut(s) 1135
BstAPI GCANNNNNTGC 1 cut(s) 524
BstAUI TGTACA 1 cut(s) 781
BstBAI YACGTR 1 cut(s) 2417
BstC8I GCNNGC 7 cut(s) 516, 529, 909, 1098, 1968, 2368, 2468
BstDSI CCRYGG 1 cut(s) 2290
BstF5I GGATG 6 cut(s) 1018, 1342, 1389, 1810, 2060, 2610
BstFNI CGCG 1 cut(s) 829
BstH2I RGCGCY 1 cut(s) 1061
BstHHI GCGC 4 cut(s) 1060, 1117, 1292, 1442
BstMAI GTCTC 5 cut(s) 793, 1245, 1661, 1830, 2184
BstMCI CGRYCG 1 cut(s) 1425
BstMWI GCNNNNNNNGC 9 cut(s) 64, 511, 524, 763, 1199, 1208, 1565, 2360, 2632
BstNI CCWGG 7 cut(s) 261, 576, 804, 940, 1317, 1638, 2638
BstNSI RCATGY 2 cut(s) 911, 1100
BstSFI CTRYAG 6 cut(s) 459, 640, 1041, 1472, 1971, 2352
BstUI CGCG 1 cut(s) 829
BstV1I GCAGC 8 cut(s) 283, 445, 1189, 1486, 1568, 1580, 2338, 2375
BstV2I GAAGAC 1 cut(s) 165
BstX2I RGATCY 1 cut(s) 410
BstXI CCANNNNNNTGG 1 cut(s) 2222
BstYI RGATCY 1 cut(s) 410
BstZ17I GTATAC 1 cut(s) 1081
Bsu36I CCTNAGG 1 cut(s) 2049
BsuRI GGCC 2 cut(s) 67, 666
BtgI CCRYGG 1 cut(s) 2290
BtgZI GCGATG 1 cut(s) 590
BtsCI GGATG 6 cut(s) 1018, 1342, 1389, 1810, 2060, 2610
BtsI GCAGTG 1 cut(s) 680
BtsIMutI CAGTG 1 cut(s) 680
BveI ACCTGC 2 cut(s) 217, 1562
Cac8I GCNNGC 7 cut(s) 516, 529, 909, 1098, 1968, 2368, 2468
CaiI CAGNNNCTG 3 cut(s) 299, 1705, 2595
CciI TCATGA 1 cut(s) 2122
CfoI GCGC 4 cut(s) 1060, 1117, 1292, 1442
Cfr10I RCCGGY 2 cut(s) 1073, 2466
Cfr9I CCCGGG 1 cut(s) 34
CseI GACGC 1 cut(s) 1961
Csp6I GTAC 8 cut(s) 252, 312, 782, 966, 1157, 1325, 1595, 2226
CspAI ACCGGT 1 cut(s) 1073
CviAII CATG 8 cut(s) 694, 908, 1097, 1118, 1580, 1772, 2123, 2291
CviQI GTAC 8 cut(s) 252, 312, 782, 966, 1157, 1325, 1595, 2226
DraI TTTAAA 1 cut(s) 501
Eam1104I CTCTTC 6 cut(s) 352, 1252, 2084, 2187, 2339, 2379
EarI CTCTTC 6 cut(s) 352, 1252, 2084, 2187, 2339, 2379
EciI GGCGGA 1 cut(s) 246
Ecl136II GAGCTC 1 cut(s) 900
Eco130I CCWWGG 4 cut(s) 134, 1183, 1219, 2290
Eco24I GRGCYC 2 cut(s) 902, 2637
Eco31I GGTCTC 1 cut(s) 793
Eco47III AGCGCT 1 cut(s) 1059
Eco53kI GAGCTC 1 cut(s) 900
Eco57I CTGAAG 7 cut(s) 333, 869, 1011, 1182, 1476, 1862, 2403
Eco81I CCTNAGG 1 cut(s) 2049
Eco88I CYCGRG 3 cut(s) 34, 1242, 1827
EcoICRI GAGCTC 1 cut(s) 900
EcoO109I RGGNCCY 1 cut(s) 2096
EcoRI GAATTC 1 cut(s) 2396
EcoRII CCWGG 7 cut(s) 259, 574, 802, 938, 1315, 1636, 2636
EcoT14I CCWWGG 4 cut(s) 134, 1183, 1219, 2290
EcoT22I ATGCAT 3 cut(s) 913, 1098, 1102
EcoT38I GRGCYC 2 cut(s) 902, 2637
ErhI CCWWGG 4 cut(s) 134, 1183, 1219, 2290
Esp3I CGTCTC 1 cut(s) 1661
FaeI CATG 8 cut(s) 697, 911, 1100, 1121, 1583, 1775, 2126, 2294
FalI AAGNNNNNCTT 2 cut(s) 2083, 2115
FaqI GGGAC 5 cut(s) 80, 219, 1084, 1284, 1769
FatI CATG 8 cut(s) 693, 907, 1096, 1117, 1579, 1771, 2122, 2290
FauNDI CATATG 1 cut(s) 1309
FblI GTMKAC 4 cut(s) 918, 1080, 1428, 1977
Fnu4HI GCNGC 9 cut(s) 297, 459, 1203, 1475, 1557, 1569, 1686, 2352, 2364
FokI GGATG 6 cut(s) 1025, 1329, 1396, 1817, 2047, 2617
FriOI GRGCYC 2 cut(s) 902, 2637
Fsp4HI GCNGC 9 cut(s) 297, 459, 1203, 1475, 1557, 1569, 1686, 2352, 2364
FspBI CTAG 7 cut(s) 53, 135, 515, 528, 1170, 1563, 2451
GlaI GCGC 4 cut(s) 1059, 1116, 1291, 1441
GluI GCNGC 9 cut(s) 297, 459, 1203, 1475, 1557, 1569, 1686, 2352, 2364
GsaI CCCAGC 1 cut(s) 561
GsuI CTGGAG 2 cut(s) 93, 303
HaeII RGCGCY 1 cut(s) 1061
HaeIII GGCC 2 cut(s) 67, 666
HapII CCGG 7 cut(s) 35, 92, 228, 284, 1074, 2401, 2467
HgaI GACGC 1 cut(s) 1961
HhaI GCGC 4 cut(s) 1060, 1117, 1292, 1442
Hin1II CATG 8 cut(s) 697, 911, 1100, 1121, 1583, 1775, 2126, 2294
Hin6I GCGC 4 cut(s) 1058, 1115, 1290, 1440
HinP1I GCGC 4 cut(s) 1058, 1115, 1290, 1440
HincII GTYRAC 1 cut(s) 1429
HindII GTYRAC 1 cut(s) 1429
HindIII AAGCTT 4 cut(s) 1488, 1726, 1896, 2033
HinfI GANTC 8 cut(s) 464, 824, 920, 995, 1046, 1278, 1339, 1986
HpaII CCGG 7 cut(s) 35, 92, 228, 284, 1074, 2401, 2467
Hpy166II GTNNAC 6 cut(s) 919, 1081, 1429, 1543, 1577, 1978
Hpy188III TCNNGA 9 cut(s) 53, 428, 752, 1170, 1514, 1664, 2123, 2285, 2630
Hpy8I GTNNAC 6 cut(s) 919, 1081, 1429, 1543, 1577, 1978
Hpy99I CGWCG 3 cut(s) 25, 184, 1430
HpyAV CCTTC 5 cut(s) 390, 1942, 2085, 2213, 2429
HpyCH4III ACNGT 9 cut(s) 180, 620, 957, 970, 1274, 1423, 1855, 1975, 2328
HpyCH4IV ACGT 5 cut(s) 595, 1670, 1838, 2375, 2416
HpyF10VI GCNNNNNNNGC 9 cut(s) 64, 511, 524, 763, 1199, 1208, 1565, 2360, 2632
HpySE526I ACGT 5 cut(s) 595, 1670, 1838, 2375, 2416
Hsp92II CATG 8 cut(s) 697, 911, 1100, 1121, 1583, 1775, 2126, 2294
HspAI GCGC 4 cut(s) 1058, 1115, 1290, 1440
KpnI GGTACC 1 cut(s) 1328
KroI GCCGGC 1 cut(s) 2466
KroNI GCCGGC 1 cut(s) 2468
LguI GCTCTTC 2 cut(s) 1252, 2379
LmnI GCTCC 5 cut(s) 542, 623, 650, 2318, 2416
Lsp1109I GCAGC 8 cut(s) 283, 445, 1189, 1486, 1568, 1580, 2338, 2375
LweI GCATC 6 cut(s) 1109, 1672, 1692, 1872, 2174, 2199
MaeI CTAG 7 cut(s) 53, 135, 515, 528, 1170, 1563, 2451
MaeII ACGT 5 cut(s) 595, 1670, 1838, 2375, 2416
MaeIII GTNAC 3 cut(s) 204, 1086, 1268
MflI RGATCY 1 cut(s) 410
MhlI GDGCHC 2 cut(s) 902, 2637
MlyI GAGTC 4 cut(s) 458, 914, 1055, 1348
MmeI TCCRAC 2 cut(s) 388, 616
Mph1103I ATGCAT 3 cut(s) 913, 1098, 1102
MroNI GCCGGC 1 cut(s) 2466
MseI TTAA 7 cut(s) 27, 276, 288, 500, 653, 1136, 1674
MslI CAYNNNNRTG 1 cut(s) 2127
MspA1I CMGCKG 2 cut(s) 296, 2333
MspCI CTTAAG 1 cut(s) 1135
MspI CCGG 7 cut(s) 35, 92, 228, 284, 1074, 2401, 2467
Mva1269I GAATGC 1 cut(s) 2426
MvaI CCWGG 7 cut(s) 261, 576, 804, 940, 1317, 1638, 2638
MvnI CGCG 1 cut(s) 829
MwoI GCNNNNNNNGC 9 cut(s) 64, 511, 524, 763, 1199, 1208, 1565, 2360, 2632
NaeI GCCGGC 1 cut(s) 2468
NciI CCSGG 3 cut(s) 35, 36, 92
NcoI CCATGG 1 cut(s) 2290
NdeI CATATG 1 cut(s) 1309
NgoMIV GCCGGC 1 cut(s) 2466
NheI GCTAGC 2 cut(s) 514, 527
NlaIII CATG 8 cut(s) 697, 911, 1100, 1121, 1583, 1775, 2126, 2294
NlaIV GGNNCC 7 cut(s) 96, 1072, 1181, 1300, 1326, 2097, 2320
NmuCI GTSAC 2 cut(s) 204, 1086
NsiI ATGCAT 3 cut(s) 913, 1098, 1102
NspI RCATGY 2 cut(s) 911, 1100
PaeI GCATGC 2 cut(s) 911, 1100
PagI TCATGA 1 cut(s) 2122
PaqCI CACCTGC 1 cut(s) 217
PciSI GCTCTTC 2 cut(s) 1252, 2379
PcsI WCGNNNNNNNCGW 1 cut(s) 2169
PctI GAATGC 1 cut(s) 2426
PdiI GCCGGC 1 cut(s) 2468
PfeI GAWTC 4 cut(s) 824, 995, 1278, 1986
PflFI GACNNNGTC 1 cut(s) 1955
PflMI CCANNNNNTGG 1 cut(s) 1380
PfoI TCCNGGA 1 cut(s) 1315
PinAI ACCGGT 1 cut(s) 1073
PkrI GCNGC 9 cut(s) 298, 460, 1204, 1476, 1558, 1570, 1687, 2353, 2365
PleI GAGTC 4 cut(s) 458, 914, 1054, 1347
PpsI GAGTC 4 cut(s) 458, 914, 1054, 1347
Ppu21I YACGTR 1 cut(s) 2417
PpuMI RGGWCCY 1 cut(s) 2096
PshBI ATTAAT 1 cut(s) 653
PsiI TTATAA 1 cut(s) 1619
Psp124BI GAGCTC 1 cut(s) 902
Psp1406I AACGTT 1 cut(s) 2375
Psp5II RGGWCCY 1 cut(s) 2096
Psp6I CCWGG 7 cut(s) 259, 574, 802, 938, 1315, 1636, 2636
PspFI CCCAGC 1 cut(s) 557
PspGI CCWGG 7 cut(s) 259, 574, 802, 938, 1315, 1636, 2636
PspN4I GGNNCC 7 cut(s) 96, 1072, 1181, 1300, 1326, 2097, 2320
PspPPI RGGWCCY 1 cut(s) 2096
PstI CTGCAG 4 cut(s) 463, 1045, 1476, 2356
PstNI CAGNNNCTG 3 cut(s) 299, 1705, 2595
PsuI RGATCY 1 cut(s) 410
PsyI GACNNNGTC 1 cut(s) 1955
PvuII CAGCTG 2 cut(s) 296, 2333
RsaI GTAC 8 cut(s) 253, 313, 783, 967, 1158, 1326, 1596, 2227
RsaNI GTAC 8 cut(s) 252, 312, 782, 966, 1157, 1325, 1595, 2226
RseI CAYNNNNRTG 1 cut(s) 2127
SacI GAGCTC 1 cut(s) 902
SalI GTCGAC 1 cut(s) 1427
SapI GCTCTTC 2 cut(s) 1252, 2379
SaqAI TTAA 7 cut(s) 27, 276, 288, 500, 653, 1136, 1674
SatI GCNGC 9 cut(s) 297, 459, 1203, 1475, 1557, 1569, 1686, 2352, 2364
ScaI AGTACT 1 cut(s) 253
SchI GAGTC 4 cut(s) 458, 914, 1055, 1348
SduI GDGCHC 2 cut(s) 902, 2637
SfaNI GCATC 6 cut(s) 1109, 1672, 1692, 1872, 2174, 2199
SfcI CTRYAG 6 cut(s) 459, 640, 1041, 1472, 1971, 2352
SmaI CCCGGG 1 cut(s) 36
SmiMI CAYNNNNRTG 1 cut(s) 2127
SmlI CTYRAG 2 cut(s) 247, 1135
SmoI CTYRAG 2 cut(s) 247, 1135
SphI GCATGC 2 cut(s) 911, 1100
SsiI CCGC 5 cut(s) 257, 829, 1010, 1685, 1904
SspMI CTAG 7 cut(s) 53, 135, 515, 528, 1170, 1563, 2451
SstI GAGCTC 1 cut(s) 902
StyI CCWWGG 4 cut(s) 134, 1183, 1219, 2290
TaaI ACNGT 9 cut(s) 180, 620, 957, 970, 1274, 1423, 1855, 1975, 2328
TaiI ACGT 5 cut(s) 598, 1673, 1841, 2378, 2419
TaqI TCGA 7 cut(s) 182, 725, 1049, 1428, 1959, 2172, 2232
TatI WGTACW 2 cut(s) 251, 781
TauI GCSGC 1 cut(s) 1688
TfiI GAWTC 4 cut(s) 824, 995, 1278, 1986
Tru1I TTAA 7 cut(s) 27, 276, 288, 500, 653, 1136, 1674
Tru9I TTAA 7 cut(s) 27, 276, 288, 500, 653, 1136, 1674
TscAI CASTG 1 cut(s) 680
TseFI GTSAC 2 cut(s) 204, 1086
TseI GCWGC 8 cut(s) 296, 458, 1202, 1474, 1556, 1568, 2351, 2363
Tsp45I GTSAC 2 cut(s) 204, 1086
TspDTI ATGAA 9 cut(s) 200, 710, 750, 888, 1067, 2139, 2145, 2567, 2598
TspGWI ACGGA 2 cut(s) 299, 988
TspMI CCCGGG 1 cut(s) 34
TspRI CASTG 1 cut(s) 680
Tth111I GACNNNGTC 1 cut(s) 1955
Van91I CCANNNNNTGG 1 cut(s) 1380
Vha464I CTTAAG 1 cut(s) 1135
VspI ATTAAT 1 cut(s) 653
XapI RAATTY 4 cut(s) 1390, 2006, 2149, 2396
XbaI TCTAGA 2 cut(s) 52, 1169
XceI RCATGY 2 cut(s) 911, 1100
XcmI CCANNNNNNNNNTGG 1 cut(s) 1381
XmaI CCCGGG 1 cut(s) 34
XmaJI CCTAGG 1 cut(s) 134
XmiI GTMKAC 4 cut(s) 918, 1080, 1428, 1977
XspI CTAG 7 cut(s) 53, 135, 515, 528, 1170, 1563, 2451
ZrmI AGTACT 1 cut(s) 253
Zsp2I ATGCAT 3 cut(s) 913, 1098, 1102
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.