Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0012870.1

Orthogroup ID

OG0005145

Physical Location & Seq

Genomic Coordinates Reverse (-)

70677 .. 75445

Gene Structure 4769 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0012870.1_g000011.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2589 bp

atgtcgaatccaccaccgcaaccttcccttggatactcgatcagtttcagtagtccctcacagtcagacacaccatcacctgaccctgctaaaaatgccattcctcctcctcctccaccttcggtttcgcccggacaatccagattccctcctccaccaaagtttcagctagatcaatttccttctccctcggtcaaaaccccgaacgggccgtcaccggctagtggtggtggattgaaaaccggcagccccattcctcatttgagtactccccccggacctcccgtctttacttcccctgtccgtcccgctgctgtgccttttcgtgcttcgcctgttactcctcagccggttgctttctctacggccgcatccttgccaacgtcttcgcctgtcaacttttcgaatggatcacttgaattggaccaccaactgtccaatgtcacagacgatgatgcagtttctgttggtgaaccaccgtatgtcttattctcagctcataaggtgttgaaacagaagaaacaagcaaatgtcccaagtttgggttttggggcattggtttcccctgggagggaaatttctccaggtcctcaaataatacaacgtgatcctcatcgctgccatagttgtggagcttatgcaaatatctactgcaacattttgctgggctcaggtcagtggcagtgtgtaatctgccgagaattgaatggtagtgagggggaatatatagctcctagcaaggaagatcttgccaactttccagagttgtcatctcccatggttgattatgttcaaactgcgaacaatagacctggttttgttccagtttctgattctagaatgtctgcaccccttgttcttgttatagacgagtgtttagatgaaccacatctctggcatttacagagctccttgcatgcctttgtcgattcacttccccctacaacgagaattggaatagtactatatggtcgcacagtatcagtttatgatttttcagaggaatcagttgcatctgctgatgtgcttccaggcgacaaatcaccatgccaggagtccttgaaggcattgatatatggaaccggtatatatttgtctccaatgcatgcttcactgcctgtagcacatgccatattctcatcattaaggccgtataaattgaacattccagaagcttctagagaccggtgccttggcacagcagttgaggttgctcttgctataattcaaggcccatcagcagacatttctcgaggggtaataaaaaggtcaggaggtaatagcagagtcatagtttgtgctggtggacccaatacttatggtcctggatctgttcctcattctttcagtcacccaaattatgctcacttggaaaagaccgcattgaaatggatggagcatctgggtcaagaggcacaccgacacaatacagtagttgatattctttgcgctgggcaatgccctgtaagggttcctgttttgcagcctcttgcaaaagcttctgggggcgttttcgttctccatgatgactttggtgaagcctttggagtgaacttgcaaagggcatccatcagggcagcaggcttccgtgggttcttggcaattcgctgttcagatgatattctcataacccaagttgtgggtcctggtgaagaggcacatgtagacactcatgaaacgttcaaaaatgacacatctctttacatacaaatgccaagtgtcgaagaaacacagagcttctcactctccttggaaaataagagggacattaggactgagtatgtatatttccagtttacaactcagtttctgaatgtttatcaagctgatatatcaagagtaataactgttagattgccaacagttgatagggtttcagtatctcttgagagtgttcaagaggaaggggcagcagttcttattgcaaagaggactctcttgcgagccaaaaacagttctgatgcaattgatatgcaatcaacaatagatgaaagaattaaagacattgctttaaaatatggttctcaagtaccaaaatcaaagcaatatcgtttcccaaaggagatgtctttattaccagagcacctgtttcatcttagaaggggcccacttttgggaaacattgttggccatgaagatgagaggtctgtgttacggaacttgtttctgaatgcatcctttgatctgtctctgcgaatggttgcgcctcgttgtctaatgcatcgggaagggggtactttcgaggaactaccagcttatgaccttgctatgcagtctgatgcagcagttgtacttgatcatggcacagatgtcttcatttggttgggtgctgaacttgctgctgatgaagggaaaagtgcagctgctttagctgcgaagttctcagcctctgaggctcggtattttgtatcgcggctcaatcctgcgcacaaggatcctccttatgagcaggaggcaagatttcctcagctacgaactttgacgatagaacggcgcacaaagctgaaaagcagttttattagttttgatgatcctagcttctgtgagtgggtacgaagcttgagagtggttcccccagaaccaagttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Gelsolin Sec23_BS Sec23_helical Sec23_trunk zf-Sec23_Sec24

Protein Analysis

862

Amino Acids

93.67

Weight (kDa)

6.16

Isoelectric Point (pI)

57.39

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005145)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G01810 AT4G01810 AT4G01810
fragaria_vesca	FvH4_1g26250 FvH4_1g26250 FvH4_1g26250 FvH4_1g26250 FvH4_1g26250
malus_domestica	MD09G1290300.v1.1 MD17G1284900.v1.1
prunus_persica	Prupe.3G002800_v2.0.a1 Prupe.3G002800_v2.0.a1 Prupe.3G002800_v2.0.a1 Prupe.3G002800_v2.0.a1
pyrus_communis	pycom09g19810 pycom17g28070
rosa_chinensis	RchiOBHm_Chr3g0485911
rosa_laevigata	RLG00000023123
rosa_multiflora	Rmu_sc0004876.1_g000006 Rmu_sc0012870.1_g000011
rosa_roxburghii	Rroxscaffold_6G00396210
rosa_rugosa	Rorug03G0222000 Rorug03G0222100 Rorug03G0222200 Rorug03G0222300
rosa_samantha	Rh3AG271700 Rh3BG306700 Rh3DG301400
rosa_wichuraiana	Rw0G015510 Rw3G024140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	2427
AccB1I	GGYRCC	1 cut(s)	1188
AccB7I	CCANNNNNTGG	1 cut(s)	1639
AccI	GTMKAC	1 cut(s)	1665
AccII	CGCG	1 cut(s)	2413
AciI	CCGC	5 cut(s)	17, 309, 369, 1380, 2413
AclI	AACGTT	1 cut(s)	1679
AclWI	GGATC	6 cut(s)	418, 602, 1336, 2429, 2442, 2525
AcoI	YGGCCR	2 cut(s)	366, 2128
AcsI	RAATTY	1 cut(s)	576
AfaI	GTAC	6 cut(s)	268, 963, 2031, 2236, 2292, 2553
AflIII	ACRYGT	1 cut(s)	1660
AgeI	ACCGGT	2 cut(s)	1082, 1185
AhdI	GACNNNNNGTC	1 cut(s)	284
AjnI	CCWGG	7 cut(s)	565, 583, 811, 1030, 1050, 1324, 1645
AjuI	GAANNNNNNNTTGG	2 cut(s)	1093, 1125
Alw21I	GWGCWC	2 cut(s)	911, 2085
Alw26I	GTCTC	3 cut(s)	1101, 1176, 2193
AlwI	GGATC	6 cut(s)	418, 602, 1336, 2429, 2442, 2525
AlwNI	CAGNNNCTG	4 cut(s)	464, 830, 1810, 2390
Ama87I	CYCGRG	1 cut(s)	1251
AoxI	GGCC	6 cut(s)	209, 366, 1148, 1231, 2104, 2128
ApaI	GGGCCC	1 cut(s)	2108
ApoI	RAATTY	1 cut(s)	576
ArsI	GACNNNNNNTTYG	4 cut(s)	197, 229, 2051, 2083
AsiGI	ACCGGT	2 cut(s)	1082, 1185
AspLEI	GCGC	4 cut(s)	1451, 2206, 2428, 2496
AsuC2I	CCSGG	2 cut(s)	132, 276
AsuHPI	GGTGA	7 cut(s)	69, 207, 482, 1035, 1343, 1547, 1661
AsuII	TTCGAA	1 cut(s)	404
AvaI	CYCGRG	1 cut(s)	1251
AvaII	GGWCC	6 cut(s)	278, 424, 587, 1307, 1322, 1643
BaeGI	GKGCMC	1 cut(s)	2108
BalI	TGGCCA	1 cut(s)	2130
BamHI	GGATCC	1 cut(s)	2434
BanI	GGYRCC	1 cut(s)	1188
BanII	GRGCYC	3 cut(s)	671, 911, 2108
BbsI	GAAGAC	2 cut(s)	378, 2305
Bbv12I	GWGCWC	2 cut(s)	911, 2085
BbvCI	CCTCAGC	2 cut(s)	345, 2466
BccI	CCATC	4 cut(s)	82, 1243, 1387, 1577
BceAI	ACGGC	4 cut(s)	196, 381, 1135, 2507
BciT130I	CCWGG	7 cut(s)	567, 585, 813, 1032, 1052, 1326, 1647
BciVI	GTATCC	1 cut(s)	26
BclI	TGATCA	1 cut(s)	2296
BcnI	CCSGG	2 cut(s)	132, 276
BcoDI	GTCTC	3 cut(s)	1101, 1176, 2193
BfaI	CTAG	6 cut(s)	170, 222, 735, 837, 1179, 2535
BfmI	CTRYAG	1 cut(s)	1119
BfuI	GTATCC	1 cut(s)	26
BglI	GCCNNNNNGGC	1 cut(s)	2393
BglII	AGATCT	1 cut(s)	745
BmcAI	AGTACT	2 cut(s)	268, 963
Bme1390I	CCNGG	9 cut(s)	132, 276, 567, 585, 813, 1032, 1052, 1326, 1647
Bme18I	GGWCC	6 cut(s)	278, 424, 587, 1307, 1322, 1643
BmeRI	GACNNNNNGTC	1 cut(s)	284
BmeT110I	CYCGRG	1 cut(s)	1251
BmiI	GGNNCC	9 cut(s)	1081, 1190, 1309, 1473, 1644, 2105, 2106, 2436, 2571
BmrFI	CCNGG	9 cut(s)	132, 276, 567, 585, 813, 1032, 1052, 1326, 1647
BmsI	GCATC	9 cut(s)	380, 445, 1022, 1408, 1574, 1951, 2183, 2230, 2269
BpiI	GAAGAC	2 cut(s)	378, 2305
BpmI	CTGGAG	1 cut(s)	567
Bpu10I	CCTNAGC	3 cut(s)	345, 670, 2466
Bpu14I	TTCGAA	1 cut(s)	404
BpuEI	CTTGAG	3 cut(s)	1907, 2010, 2581
BpuMI	CCSGG	2 cut(s)	132, 276
BsaBI	GATNNNNATC	1 cut(s)	612
BsaI	GGTCTC	1 cut(s)	1176
BsaJI	CCNNGG	9 cut(s)	28, 189, 274, 565, 566, 777, 1192, 1588, 1749
BsaWI	WCCGGW	2 cut(s)	1082, 1185
Bse118I	RCCGGY	5 cut(s)	217, 242, 349, 1082, 1185
Bse1I	ACTGG	2 cut(s)	824, 1792
Bse3DI	GCAATG	2 cut(s)	1463, 2004
Bse8I	GATNNNNATC	1 cut(s)	612
BseBI	CCWGG	7 cut(s)	567, 585, 813, 1032, 1052, 1326, 1647
BseDI	CCNNGG	9 cut(s)	28, 189, 274, 565, 566, 777, 1192, 1588, 1749
BseGI	GGATG	4 cut(s)	371, 1398, 1565, 2174
BseJI	GATNNNNATC	1 cut(s)	612
BseMI	GCAATG	2 cut(s)	1463, 2004
BseMII	CTCAG	8 cut(s)	359, 507, 684, 1767, 1817, 2382, 2397, 2480
BseNI	ACTGG	2 cut(s)	824, 1792
BseRI	GAGGAG	5 cut(s)	96, 99, 102, 141, 333
BseSI	GKGCMC	1 cut(s)	2108
BseX3I	CGGCCG	1 cut(s)	366
BseYI	CCCAGC	2 cut(s)	664, 1451
BsgI	GTGCAG	2 cut(s)	831, 2379
Bsh1236I	CGCG	1 cut(s)	2413
Bsh1285I	CGRYCG	1 cut(s)	369
BshFI	GGCC	6 cut(s)	211, 368, 1150, 1233, 2106, 2130
BshNI	GGYRCC	1 cut(s)	1188
BshTI	ACCGGT	2 cut(s)	1082, 1185
BsiEI	CGRYCG	1 cut(s)	369
BsiHKAI	GWGCWC	2 cut(s)	911, 2085
BsiHKCI	CYCGRG	1 cut(s)	1251
BsiSI	CCGG	7 cut(s)	132, 218, 243, 276, 350, 1083, 1186
BslFI	GGGAC	4 cut(s)	39, 291, 518, 1778
BsmAI	GTCTC	3 cut(s)	1101, 1176, 2193
BsmFI	GGGAC	4 cut(s)	39, 291, 518, 1778
BsmI	GAATGC	1 cut(s)	2176
BsnI	GGCC	6 cut(s)	211, 368, 1150, 1233, 2106, 2130
Bso31I	GGTCTC	1 cut(s)	1176
BsoBI	CYCGRG	1 cut(s)	1251
Bsp119I	TTCGAA	1 cut(s)	404
Bsp120I	GGGCCC	1 cut(s)	2104
Bsp1286I	GDGCHC	4 cut(s)	671, 911, 2085, 2108
Bsp19I	CCATGG	1 cut(s)	777
BspACI	CCGC	5 cut(s)	17, 309, 369, 1380, 2413
BspANI	GGCC	6 cut(s)	211, 368, 1150, 1233, 2106, 2130
BspCNI	CTCAG	8 cut(s)	358, 506, 683, 1768, 1816, 2383, 2396, 2479
BspFNI	CGCG	1 cut(s)	2413
BspHI	TCATGA	1 cut(s)	1672
BspLI	GGNNCC	9 cut(s)	1081, 1190, 1309, 1473, 1644, 2105, 2106, 2436, 2571
BspPI	GGATC	6 cut(s)	418, 602, 1336, 2429, 2442, 2525
BspT104I	TTCGAA	1 cut(s)	404
BspT107I	GGYRCC	1 cut(s)	1188
BspTNI	GGTCTC	1 cut(s)	1176
BsrDI	GCAATG	2 cut(s)	1463, 2004
BsrFI	RCCGGY	5 cut(s)	217, 242, 349, 1082, 1185
BsrI	ACTGG	2 cut(s)	824, 1792
BssAI	RCCGGY	5 cut(s)	217, 242, 349, 1082, 1185
BssECI	CCNNGG	9 cut(s)	28, 189, 274, 565, 566, 777, 1192, 1588, 1749
BssT1I	CCWWGG	4 cut(s)	28, 777, 1192, 1749
Bst2UI	CCWGG	7 cut(s)	567, 585, 813, 1032, 1052, 1326, 1647
Bst4CI	ACNGT	8 cut(s)	63, 435, 480, 979, 1432, 1849, 1864, 1955
Bst6I	CTCTTC	1 cut(s)	1647
BstBI	TTCGAA	1 cut(s)	404
BstC8I	GCNNGC	4 cut(s)	918, 1107, 1582, 1944
BstDEI	CTNAG	9 cut(s)	345, 493, 670, 1776, 1803, 2096, 2383, 2391, 2466
BstDSI	CCRYGG	2 cut(s)	777, 1588
BstF5I	GGATG	4 cut(s)	371, 1398, 1565, 2174
BstFNI	CGCG	1 cut(s)	2413
BstHHI	GCGC	4 cut(s)	1451, 2206, 2428, 2496
BstMAI	GTCTC	3 cut(s)	1101, 1176, 2193
BstMCI	CGRYCG	1 cut(s)	369
BstMWI	GCNNNNNNNGC	6 cut(s)	95, 2336, 2369, 2372, 2393, 2500
BstNI	CCWGG	7 cut(s)	567, 585, 813, 1032, 1052, 1326, 1647
BstNSI	RCATGY	4 cut(s)	920, 1109, 1130, 1664
BstSCI	CCNGG	9 cut(s)	130, 274, 565, 583, 811, 1030, 1050, 1324, 1645
BstSFI	CTRYAG	1 cut(s)	1119
BstSLI	GKGCMC	1 cut(s)	2108
BstUI	CGCG	1 cut(s)	2413
BstV2I	GAAGAC	2 cut(s)	378, 2305
BstX2I	RGATCY	3 cut(s)	745, 1328, 2434
BstXI	CCANNNNNNTGG	2 cut(s)	629, 894
BstYI	RGATCY	3 cut(s)	745, 1328, 2434
BstZI	CGGCCG	1 cut(s)	366
BsuI	GTATCC	1 cut(s)	26
BsuRI	GGCC	6 cut(s)	211, 368, 1150, 1233, 2106, 2130
BtgI	CCRYGG	2 cut(s)	777, 1588
BtgZI	GCGATG	1 cut(s)	599
BtsCI	GGATG	4 cut(s)	371, 1398, 1565, 2174
BtsI	GCAGTG	2 cut(s)	689, 1112
BtsIMutI	CAGTG	3 cut(s)	683, 689, 1112
Cac8I	GCNNGC	4 cut(s)	918, 1107, 1582, 1944
CaiI	CAGNNNCTG	4 cut(s)	464, 830, 1810, 2390
CciI	TCATGA	1 cut(s)	1672
CfoI	GCGC	4 cut(s)	1451, 2206, 2428, 2496
Cfr10I	RCCGGY	5 cut(s)	217, 242, 349, 1082, 1185
CsiI	ACCWGGT	1 cut(s)	811
Csp6I	GTAC	6 cut(s)	267, 962, 2030, 2235, 2291, 2552
CspAI	ACCGGT	2 cut(s)	1082, 1185
CviQI	GTAC	6 cut(s)	267, 962, 2030, 2235, 2291, 2552
DdeI	CTNAG	9 cut(s)	345, 493, 670, 1776, 1803, 2096, 2383, 2391, 2466
DraI	TTTAAA	1 cut(s)	2013
DriI	GACNNNNNGTC	1 cut(s)	284
EaeI	YGGCCR	2 cut(s)	366, 2128
EagI	CGGCCG	1 cut(s)	366
Eam1104I	CTCTTC	1 cut(s)	1647
Eam1105I	GACNNNNNGTC	1 cut(s)	284
EarI	CTCTTC	1 cut(s)	1647
Ecl136II	GAGCTC	1 cut(s)	909
EclXI	CGGCCG	1 cut(s)	366
Eco130I	CCWWGG	4 cut(s)	28, 777, 1192, 1749
Eco24I	GRGCYC	3 cut(s)	671, 911, 2108
Eco31I	GGTCTC	1 cut(s)	1176
Eco47I	GGWCC	6 cut(s)	278, 424, 587, 1307, 1322, 1643
Eco52I	CGGCCG	1 cut(s)	366
Eco53kI	GAGCTC	1 cut(s)	909
Eco88I	CYCGRG	1 cut(s)	1251
EcoICRI	GAGCTC	1 cut(s)	909
EcoO109I	RGGNCCY	3 cut(s)	587, 1643, 2104
EcoRII	CCWGG	7 cut(s)	565, 583, 811, 1030, 1050, 1324, 1645
EcoT14I	CCWWGG	4 cut(s)	28, 777, 1192, 1749
EcoT22I	ATGCAT	3 cut(s)	1107, 2176, 2223
EcoT38I	GRGCYC	3 cut(s)	671, 911, 2108
ErhI	CCWWGG	4 cut(s)	28, 777, 1192, 1749
FaqI	GGGAC	4 cut(s)	39, 291, 518, 1778
FauI	CCCGC	1 cut(s)	316
FbaI	TGATCA	1 cut(s)	2296
FblI	GTMKAC	1 cut(s)	1665
FokI	GGATG	4 cut(s)	358, 1405, 1552, 2161
FriOI	GRGCYC	3 cut(s)	671, 911, 2108
FspBI	CTAG	6 cut(s)	170, 222, 735, 837, 1179, 2535
FspI	TGCGCA	1 cut(s)	2427
GlaI	GCGC	4 cut(s)	1450, 2205, 2427, 2495
GsaI	CCCAGC	2 cut(s)	668, 1455
GsuI	CTGGAG	1 cut(s)	567
HaeIII	GGCC	6 cut(s)	211, 368, 1150, 1233, 2106, 2130
HapII	CCGG	7 cut(s)	132, 218, 243, 276, 350, 1083, 1186
HhaI	GCGC	4 cut(s)	1451, 2206, 2428, 2496
Hin6I	GCGC	4 cut(s)	1449, 2204, 2426, 2494
HinP1I	GCGC	4 cut(s)	1449, 2204, 2426, 2494
HincII	GTYRAC	1 cut(s)	397
HindII	GTYRAC	1 cut(s)	397
HindIII	AAGCTT	3 cut(s)	1173, 1497, 2557
HinfI	GANTC	8 cut(s)	7, 144, 833, 929, 1004, 1055, 1287, 1933
HpaII	CCGG	7 cut(s)	132, 218, 243, 276, 350, 1083, 1186
HphI	GGTGA	7 cut(s)	69, 207, 482, 1035, 1343, 1547, 1661
Hpy166II	GTNNAC	6 cut(s)	397, 473, 1307, 1552, 1666, 1797
Hpy188I	TCNGA	9 cut(s)	67, 832, 1000, 1615, 1812, 1960, 2169, 2278, 2392
Hpy8I	GTNNAC	6 cut(s)	397, 473, 1307, 1552, 1666, 1797
HpyAV	CCTTC	8 cut(s)	33, 129, 192, 1057, 1898, 2094, 2222, 2342
HpyCH4III	ACNGT	8 cut(s)	63, 435, 480, 979, 1432, 1849, 1864, 1955
HpyCH4IV	ACGT	3 cut(s)	383, 604, 1679
HpyF10VI	GCNNNNNNNGC	6 cut(s)	95, 2336, 2369, 2372, 2393, 2500
HpyF3I	CTNAG	9 cut(s)	345, 493, 670, 1776, 1803, 2096, 2383, 2391, 2466
HpySE526I	ACGT	3 cut(s)	383, 604, 1679
HspAI	GCGC	4 cut(s)	1449, 2204, 2426, 2494
Ksp22I	TGATCA	1 cut(s)	2296
LmnI	GCTCC	4 cut(s)	632, 736, 914, 1396
LweI	GCATC	9 cut(s)	380, 445, 1022, 1408, 1574, 1951, 2183, 2230, 2269
MabI	ACCWGGT	1 cut(s)	811
MaeI	CTAG	6 cut(s)	170, 222, 735, 837, 1179, 2535
MaeII	ACGT	3 cut(s)	383, 604, 1679
MaeIII	GTNAC	5 cut(s)	213, 337, 442, 1349, 2151
MboII	GAAGA	7 cut(s)	378, 529, 755, 1664, 1736, 2147, 2305
MfeI	CAATTG	1 cut(s)	1965
MflI	RGATCY	3 cut(s)	745, 1328, 2434
MhlI	GDGCHC	4 cut(s)	671, 911, 2085, 2108
MlsI	TGGCCA	1 cut(s)	2130
MluNI	TGGCCA	1 cut(s)	2130
MlyI	GAGTC	3 cut(s)	1064, 1296, 1927
Mox20I	TGGCCA	1 cut(s)	2130
Mph1103I	ATGCAT	3 cut(s)	1107, 2176, 2223
MscI	TGGCCA	1 cut(s)	2130
MseI	TTAA	3 cut(s)	1145, 1998, 2012
MslI	CAYNNNNRTG	4 cut(s)	627, 1387, 1709, 2136
Msp20I	TGGCCA	1 cut(s)	2130
MspA1I	CMGCKG	2 cut(s)	311, 2363
MspI	CCGG	7 cut(s)	132, 218, 243, 276, 350, 1083, 1186
MspR9I	CCNGG	9 cut(s)	132, 276, 567, 585, 813, 1032, 1052, 1326, 1647
MunI	CAATTG	1 cut(s)	1965
Mva1269I	GAATGC	1 cut(s)	2176
MvaI	CCWGG	7 cut(s)	567, 585, 813, 1032, 1052, 1326, 1647
MvnI	CGCG	1 cut(s)	2413
MwoI	GCNNNNNNNGC	6 cut(s)	95, 2336, 2369, 2372, 2393, 2500
NciI	CCSGG	2 cut(s)	132, 276
NcoI	CCATGG	1 cut(s)	777
NlaIV	GGNNCC	9 cut(s)	1081, 1190, 1309, 1473, 1644, 2105, 2106, 2436, 2571
NmeAIII	GCCGAG	1 cut(s)	722
NmuCI	GTSAC	3 cut(s)	213, 442, 1349
NsbI	TGCGCA	1 cut(s)	2427
NsiI	ATGCAT	3 cut(s)	1107, 2176, 2223
NspI	RCATGY	4 cut(s)	920, 1109, 1130, 1664
NspV	TTCGAA	1 cut(s)	404
PaeI	GCATGC	2 cut(s)	920, 1109
PaeR7I	CTCGAG	1 cut(s)	1251
PagI	TCATGA	1 cut(s)	1672
PasI	CCCWGGG	1 cut(s)	566
PciI	ACATGT	1 cut(s)	1660
PctI	GAATGC	1 cut(s)	2176
PfeI	GAWTC	5 cut(s)	7, 144, 833, 929, 1004
PflMI	CCANNNNNTGG	1 cut(s)	1639
PfoI	TCCNGGA	1 cut(s)	1324
PinAI	ACCGGT	2 cut(s)	1082, 1185
PleI	GAGTC	3 cut(s)	1063, 1295, 1927
PpsI	GAGTC	3 cut(s)	1063, 1295, 1927
PpuMI	RGGWCCY	2 cut(s)	587, 1643
PscI	ACATGT	1 cut(s)	1660
Psp124BI	GAGCTC	1 cut(s)	911
Psp1406I	AACGTT	1 cut(s)	1679
Psp5II	RGGWCCY	2 cut(s)	587, 1643
Psp6I	CCWGG	7 cut(s)	565, 583, 811, 1030, 1050, 1324, 1645
PspFI	CCCAGC	2 cut(s)	664, 1451
PspGI	CCWGG	7 cut(s)	565, 583, 811, 1030, 1050, 1324, 1645
PspN4I	GGNNCC	9 cut(s)	1081, 1190, 1309, 1473, 1644, 2105, 2106, 2436, 2571
PspOMI	GGGCCC	1 cut(s)	2104
PspPPI	RGGWCCY	2 cut(s)	587, 1643
PstNI	CAGNNNCTG	4 cut(s)	464, 830, 1810, 2390
PsuI	RGATCY	3 cut(s)	745, 1328, 2434
PvuII	CAGCTG	1 cut(s)	2363
RsaI	GTAC	6 cut(s)	268, 963, 2031, 2236, 2292, 2553
RsaNI	GTAC	6 cut(s)	267, 962, 2030, 2235, 2291, 2552
RseI	CAYNNNNRTG	4 cut(s)	627, 1387, 1709, 2136
SacI	GAGCTC	1 cut(s)	911
SaqAI	TTAA	3 cut(s)	1145, 1998, 2012
ScaI	AGTACT	2 cut(s)	268, 963
SchI	GAGTC	3 cut(s)	1064, 1296, 1927
ScrFI	CCNGG	9 cut(s)	132, 276, 567, 585, 813, 1032, 1052, 1326, 1647
SduI	GDGCHC	4 cut(s)	671, 911, 2085, 2108
SexAI	ACCWGGT	1 cut(s)	811
SfaNI	GCATC	9 cut(s)	380, 445, 1022, 1408, 1574, 1951, 2183, 2230, 2269
SfcI	CTRYAG	1 cut(s)	1119
Sfr274I	CTCGAG	1 cut(s)	1251
SfuI	TTCGAA	1 cut(s)	404
SinI	GGWCC	6 cut(s)	278, 424, 587, 1307, 1322, 1643
SlaI	CTCGAG	1 cut(s)	1251
SmiMI	CAYNNNNRTG	4 cut(s)	627, 1387, 1709, 2136
SmlI	CTYRAG	4 cut(s)	1251, 1886, 2025, 2560
SmoI	CTYRAG	4 cut(s)	1251, 1886, 2025, 2560
SphI	GCATGC	2 cut(s)	920, 1109
SsiI	CCGC	5 cut(s)	17, 309, 369, 1380, 2413
SspMI	CTAG	6 cut(s)	170, 222, 735, 837, 1179, 2535
SstI	GAGCTC	1 cut(s)	911
StyD4I	CCNGG	9 cut(s)	130, 274, 565, 583, 811, 1030, 1050, 1324, 1645
StyI	CCWWGG	4 cut(s)	28, 777, 1192, 1749
TaaI	ACNGT	8 cut(s)	63, 435, 480, 979, 1432, 1849, 1864, 1955
TaiI	ACGT	3 cut(s)	386, 607, 1682
TaqI	TCGA	7 cut(s)	5, 38, 404, 927, 1252, 1722, 2241
TaqII	GACCGA	1 cut(s)	181
TatI	WGTACW	3 cut(s)	266, 961, 2290
TauI	GCSGC	2 cut(s)	371, 2416
TfiI	GAWTC	5 cut(s)	7, 144, 833, 929, 1004
Tru1I	TTAA	3 cut(s)	1145, 1998, 2012
Tru9I	TTAA	3 cut(s)	1145, 1998, 2012
TscAI	CASTG	3 cut(s)	683, 689, 1119
TseFI	GTSAC	3 cut(s)	213, 442, 1349
Tsp45I	GTSAC	3 cut(s)	213, 442, 1349
TspDTI	ATGAA	7 cut(s)	897, 1689, 2004, 2081, 2148, 2305, 2361
TspGWI	ACGGA	3 cut(s)	293, 1577, 2170
TspRI	CASTG	3 cut(s)	683, 689, 1119
Van91I	CCANNNNNTGG	1 cut(s)	1639
VpaK11BI	GGWCC	6 cut(s)	278, 424, 587, 1307, 1322, 1643
XapI	RAATTY	1 cut(s)	576
XbaI	TCTAGA	2 cut(s)	836, 1178
XceI	RCATGY	4 cut(s)	920, 1109, 1130, 1664
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1529
XhoI	CTCGAG	1 cut(s)	1251
XmiI	GTMKAC	1 cut(s)	1665
XspI	CTAG	6 cut(s)	170, 222, 735, 837, 1179, 2535
ZrmI	AGTACT	2 cut(s)	268, 963
Zsp2I	ATGCAT	3 cut(s)	1107, 2176, 2223

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.