Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr9

Orthogroup ID

OG0005145

Physical Location & Seq

Genomic Coordinates Forward (+)

20642607 .. 20647380

Gene Structure 4774 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom09g19810.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2622 bp

ATGTCAAATCCACCGCAGCATCCCATTGGATACTCTGTCAGTATCACTCCCTCGCGCCCAGACACACCATCTCCTGACCCTGAGAAAATTTCTATTCCTCCACCACCTTTAATTGCTCTGAGATTCCCTCCACCAAAGTTTCAACAAGATCAAACTACTTCTCCATCCATCAAAACCCCAAATGCACCATCACCAGCTAATGGGTTGAAAACTGGCAGCCCTATTCCTCATTTGAGTACACCCCCTGGACCTCCTGTTTTTACTTCCCCTGTGCGTCCTGCTGCTGTGCCTTTTCGTGCTTCACCTGCAACTCCTCAGCCAGTTGCTTTCACCCCGGGCACATTTTTGCCAACATCTTCGCCTCCCAATTTTTCGAATGGCTCGCATGAACTACATCACCAACTTTCTAATGATACAGAGGATGATGCTGTGCCTGTTGGAGAATCACCATATGTCCTATTCTCAGCTCATAAGGTGTTGAAACAAAAGAAACAAGCAAATGTACCCAGTTTGGGTTTTGGGGCCTTGGTTTCACCTGGAAGGGGAATTTCACCTGGTCCCCAAATAATACAACGTGATCCTCATCGCTGCCACAGCTGTGGAGCTTATGCAAATATTTTTTGCAACATCTTATTGGGCTCAGGTCAGTGGCAATGTGTAATTTGCCGAGAACTGAATGGAAGTGAGGGAGAATACATAGTTCCTGGCAAGGAAGATCTTTGTGAGTTTCCAGAGTTGTCATCTCCTATGGTTGATTATGTCCAAACTGGGAACAATAGACCTGGCTTTGTTCCTCTTTCTGACTCAAGAATGTCTGCACCTATAGTTCTTGTCATAGATGAGTGTTTGGACGAACCACATCTGTGGGACTTACAGAGCTCCTTGCATGCATTTGTTGATTCACTTCCCCCGACAACAAGAATTGGAATAATACTGTATGGTCGGACAGTATCAGTCTATGACTTTTCAGAGGAATCAATTGCATCTGCTGATGTGCTTCCAGGAGATAAATCACCAAGTCAGGATGCCTTGAAAGCATTGATATATGGAACTGGTATATACTTGTCTCCAATGCATGCTTCCTTACCAGTAGCACATGCCATATTCTCATCATTGAGGCCATACAAAATGAAAACTCCAGAAACTTCTAGAGATCGGTGCCTGGGGACGGCAGTTGAGGTTGCTTTTGCTATAGTTCAAGGGCCATCAGGAGAAATGTCTCGAGGGCTAATTAAAAGGTCTGGAGGTAATAGCAGAGTCATTGTTTGTGCTGGTGGGCCTAATACATATGGTCCTGGATCTGTTCCCCATTCTTTCAGTCACCCAAATTATCCTCATATGGAAAAGACTGCATTGAAATGGATGGAGCATCTGGGTCAAGAGGCACACCGACAAAATACAGTGGTTGACATTTTGTGCGCTGGGCAATGCCCTGTAAGAGTTCCTGTTTTGCAGCCTCTTGCAAAAGCTTCTGGAGGCATTTTTGTTCTCCATGACGACTTTGGGGAAGCCTTTGGTGTGAACTTACAAAGGGCATCTACAAGGGCTGCAGGCTCCCGTGGGTTCTTGGCAATACGCTGTTCCGATGACATTCTCATAACTCAAGTTGTGGGTCCCGGTGAAGAGGCACATATTGACACTCATGAAACCTTCAAAAATGACACTTCTCTTTACATACAAATGCTTAGTGTTGAAGAGACACAGAGCTTCTCACTCTCCTTGGAAAATAAGAGGGACGTTAGGACTGAGTATGTGTATTTCCAGTTTACAATTCAGTATTTAAATGTGTATCAAGCTGATATATCAAGAGTAATTACTGTTAGATTGCCAACAGTTGATAGTGTTTCAGCATATCTTGCAAGTGTACAAGATGAAGTTGCAGCCGTTCTTATTGCAAAAAGGACTCTCTTGCGAGCTAAAAACTTTTCAGATGCAATTGATATGCGAGGAACAATAGATGAAAGAATTAAAGAGATTGCTCTGAAATTTGGGTCTCAAGTACCAAAGTCAAAGCTTTATCGGTTTCCAAAAGAGATCCCTTTATTGCCAGAGCTCCTGTTTCATCTAAGAAGGGGCCCACTGCTGGGAAGCATTGTTGGCCATGAAGATGAGAGATCTGTAATACGAAACTTGTTTCTGAATGCATCCTTTGATCTCTCACTCCGAATGGTAGCACCTCGTTGTTTAATGCATCGGGAAGGGGGAACATTTGAGGAACTACCAGCTTATGACCTTGCTATGCAGTCAGATGCCGCAGTTCTGATTGATCATGGCACAGATGTCTTCATTTGGTTGGGTGCTGAACTAGCTGCTGATGAAGGAAAAAGTGCAGCTGCTTTAGCGGCTTGCAGAACATTAGCTGAAGAGCTCACTGAACTGAGATTTCCAGCTCCTCGGATCCTGTCGTTCAAGGAAGGAAGTTCTCAGGCACGATATTTTGTATCGCGGCTCATACCCGCACACAAGGATCCTCCTTATGAGCAGGAGGCAAGATTCCCACAGCTACGAACATTGAGAACAGAAGAGCGGACGAAGCTGAAAAACAGTTTTATTAGTTTTGATGAGCCTAGTTTTTGCGAGTGGGTACGAAGCTTGAAAGTGGTGCCTCCGGAACCAAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Gelsolin Sec23_BS Sec23_helical Sec23_trunk zf-Sec23_Sec24

Protein Analysis

874

Amino Acids

95.56

Weight (kDa)

6.17

Isoelectric Point (pI)

53.03

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005145)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G01810 AT4G01810 AT4G01810
fragaria_vesca	FvH4_1g26250 FvH4_1g26250 FvH4_1g26250 FvH4_1g26250 FvH4_1g26250
malus_domestica	MD09G1290300.v1.1 MD17G1284900.v1.1
prunus_persica	Prupe.3G002800_v2.0.a1 Prupe.3G002800_v2.0.a1 Prupe.3G002800_v2.0.a1 Prupe.3G002800_v2.0.a1
pyrus_communis	pycom09g19810 pycom17g28070
rosa_chinensis	RchiOBHm_Chr3g0485911
rosa_laevigata	RLG00000023123
rosa_multiflora	Rmu_sc0004876.1_g000006 Rmu_sc0012870.1_g000011
rosa_roxburghii	Rroxscaffold_6G00396210
rosa_rugosa	Rorug03G0222000 Rorug03G0222100 Rorug03G0222200 Rorug03G0222300
rosa_samantha	Rh3AG271700 Rh3BG306700 Rh3DG301400
rosa_wichuraiana	Rw0G015510 Rw3G024140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	313
Acc36I	ACCTGC	1 cut(s)	313
AccB1I	GGYRCC	2 cut(s)	1158, 2602
AccB7I	CCANNNNNTGG	1 cut(s)	200
AccBSI	CCGCTC	1 cut(s)	2527
AccII	CGCG	2 cut(s)	55, 2446
AccIII	TCCGGA	1 cut(s)	2608
AciI	CCGC	6 cut(s)	14, 2253, 2342, 2446, 2457, 2527
AclWI	GGATC	7 cut(s)	572, 1306, 2029, 2392, 2405, 2462, 2475
AcoI	YGGCCR	1 cut(s)	2098
AcsI	RAATTY	3 cut(s)	87, 546, 1985
AcuI	CTGAAG	1 cut(s)	2382
AfaI	GTAC	5 cut(s)	238, 504, 1866, 2001, 2586
AfiI	CCNNNNNNNGG	6 cut(s)	200, 512, 542, 1168, 2083, 2084
AjnI	CCWGG	8 cut(s)	244, 535, 553, 703, 781, 1000, 1161, 1294
AjuI	GAANNNNNNNTTGG	2 cut(s)	1063, 1095
AleI	CACNNNNGTG	2 cut(s)	597, 862
Alw21I	GWGCWC	3 cut(s)	881, 2055, 2370
Alw26I	GTCTC	4 cut(s)	1071, 1224, 1691, 1998
AlwI	GGATC	7 cut(s)	572, 1306, 2029, 2392, 2405, 2462, 2475
Ama87I	CYCGRG	2 cut(s)	334, 1221
Aor13HI	TCCGGA	1 cut(s)	2608
AoxI	GGCC	6 cut(s)	522, 1118, 1202, 1277, 2074, 2098
ApaI	GGGCCC	1 cut(s)	2078
ApoI	RAATTY	3 cut(s)	87, 546, 1985
AspLEI	GCGC	2 cut(s)	57, 1421
AspS9I	GGNCC	9 cut(s)	248, 522, 557, 1202, 1277, 1292, 1613, 2074, 2075
AsuC2I	CCSGG	3 cut(s)	335, 336, 1617
AsuII	TTCGAA	1 cut(s)	374
AvaI	CYCGRG	2 cut(s)	334, 1221
AvaII	GGWCC	4 cut(s)	248, 557, 1292, 1613
BaeGI	GKGCMC	2 cut(s)	341, 2078
BalI	TGGCCA	1 cut(s)	2100
BamHI	GGATCC	2 cut(s)	2397, 2467
BanI	GGYRCC	2 cut(s)	1158, 2602
BanII	GRGCYC	5 cut(s)	641, 881, 2055, 2078, 2370
BbsI	GAAGAC	1 cut(s)	2275
Bbv12I	GWGCWC	3 cut(s)	881, 2055, 2370
BbvCI	CCTCAGC	1 cut(s)	315
BccI	CCATC	6 cut(s)	76, 172, 176, 196, 1213, 1357
BceAI	ACGGC	2 cut(s)	1185, 1868
BciT130I	CCWGG	8 cut(s)	246, 537, 555, 705, 783, 1002, 1163, 1296
BciVI	GTATCC	1 cut(s)	23
BclI	TGATCA	1 cut(s)	2266
BcnI	CCSGG	3 cut(s)	335, 336, 1617
BcoDI	GTCTC	4 cut(s)	1071, 1224, 1691, 1998
BfaI	CTAG	4 cut(s)	1149, 2306, 2568, 2620
BfmI	CTRYAG	3 cut(s)	822, 1191, 1548
BfuAI	ACCTGC	1 cut(s)	313
BfuI	GTATCC	1 cut(s)	23
BglII	AGATCT	2 cut(s)	715, 2114
Bme18I	GGWCC	4 cut(s)	248, 557, 1292, 1613
BmeT110I	CYCGRG	2 cut(s)	334, 1221
BmgT120I	GGNCC	9 cut(s)	248, 522, 557, 1202, 1277, 1292, 1613, 2074, 2075
BmrI	ACTGGG	2 cut(s)	501, 777
BmuI	ACTGGG	2 cut(s)	501, 777
BpiI	GAAGAC	1 cut(s)	2275
BplI	GAGNNNNNCTC	2 cut(s)	112, 144
BpmI	CTGGAG	3 cut(s)	1122, 1263, 1494
Bpu10I	CCTNAGC	2 cut(s)	315, 640
Bpu14I	TTCGAA	1 cut(s)	374
BpuEI	CTTGAG	3 cut(s)	790, 1587, 1980
BpuMI	CCSGG	3 cut(s)	335, 336, 1617
BsaBI	GATNNNNATC	1 cut(s)	582
BsaI	GGTCTC	1 cut(s)	1998
BsaJI	CCNNGG	8 cut(s)	244, 333, 334, 525, 1162, 1558, 1719, 2393
BsaWI	WCCGGW	1 cut(s)	2608
BsaXI	ACNNNNNCTCC	4 cut(s)	55, 85, 145, 175
Bsc4I	CCNNNNNNNGG	6 cut(s)	200, 512, 542, 1168, 2083, 2084
Bse1I	ACTGG	7 cut(s)	217, 320, 507, 772, 1057, 1088, 1762
Bse3DI	GCAATG	2 cut(s)	659, 1433
Bse8I	GATNNNNATC	1 cut(s)	582
BseAI	TCCGGA	1 cut(s)	2608
BseBI	CCWGG	8 cut(s)	246, 537, 555, 705, 783, 1002, 1163, 1296
BseDI	CCNNGG	8 cut(s)	244, 333, 334, 525, 1162, 1558, 1719, 2393
BseGI	GGATG	6 cut(s)	19, 164, 427, 1030, 1368, 2144
BseJI	GATNNNNATC	1 cut(s)	582
BseLI	CCNNNNNNNGG	6 cut(s)	200, 512, 542, 1168, 2083, 2084
BseMI	GCAATG	2 cut(s)	659, 1433
BseMII	CTCAG	8 cut(s)	72, 110, 329, 477, 654, 1737, 2369, 2438
BseNI	ACTGG	7 cut(s)	217, 320, 507, 772, 1057, 1088, 1762
BseRI	GAGGAG	2 cut(s)	303, 2382
BseSI	GKGCMC	2 cut(s)	341, 2078
BseYI	CCCAGC	2 cut(s)	1421, 2083
BsgI	GTGCAG	2 cut(s)	801, 2349
Bsh1236I	CGCG	2 cut(s)	55, 2446
BshFI	GGCC	6 cut(s)	524, 1120, 1204, 1279, 2076, 2100
BshNI	GGYRCC	2 cut(s)	1158, 2602
BsiHKAI	GWGCWC	3 cut(s)	881, 2055, 2370
BsiHKCI	CYCGRG	2 cut(s)	334, 1221
BsiSI	CCGG	3 cut(s)	335, 1617, 2609
BslFI	GGGAC	5 cut(s)	543, 881, 1180, 1599, 1748
BslI	CCNNNNNNNGG	6 cut(s)	200, 512, 542, 1168, 2083, 2084
BsmAI	GTCTC	4 cut(s)	1071, 1224, 1691, 1998
BsmFI	GGGAC	5 cut(s)	543, 881, 1180, 1599, 1748
BsmI	GAATGC	1 cut(s)	2146
BsnI	GGCC	6 cut(s)	524, 1120, 1204, 1279, 2076, 2100
Bso31I	GGTCTC	1 cut(s)	1998
BsoBI	CYCGRG	2 cut(s)	334, 1221
Bsp119I	TTCGAA	1 cut(s)	374
Bsp120I	GGGCCC	1 cut(s)	2074
Bsp1286I	GDGCHC	6 cut(s)	341, 641, 881, 2055, 2078, 2370
Bsp13I	TCCGGA	1 cut(s)	2608
Bsp1407I	TGTACA	1 cut(s)	1864
BspACI	CCGC	6 cut(s)	14, 2253, 2342, 2446, 2457, 2527
BspANI	GGCC	6 cut(s)	524, 1120, 1204, 1279, 2076, 2100
BspCNI	CTCAG	8 cut(s)	73, 111, 328, 476, 653, 1738, 2370, 2437
BspEI	TCCGGA	1 cut(s)	2608
BspFNI	CGCG	2 cut(s)	55, 2446
BspHI	TCATGA	1 cut(s)	1642
BspMAI	CTGCAG	1 cut(s)	1552
BspMI	ACCTGC	1 cut(s)	313
BspPI	GGATC	7 cut(s)	572, 1306, 2029, 2392, 2405, 2462, 2475
BspQI	GCTCTTC	2 cut(s)	2358, 2517
BspT104I	TTCGAA	1 cut(s)	374
BspT107I	GGYRCC	2 cut(s)	1158, 2602
BspTNI	GGTCTC	1 cut(s)	1998
BsrBI	CCGCTC	1 cut(s)	2527
BsrDI	GCAATG	2 cut(s)	659, 1433
BsrGI	TGTACA	1 cut(s)	1864
BsrI	ACTGG	7 cut(s)	217, 320, 507, 772, 1057, 1088, 1762
BssECI	CCNNGG	8 cut(s)	244, 333, 334, 525, 1162, 1558, 1719, 2393
BssT1I	CCWWGG	2 cut(s)	525, 1719
Bst2UI	CCWGG	8 cut(s)	246, 537, 555, 705, 783, 1002, 1163, 1296
Bst4CI	ACNGT	6 cut(s)	936, 949, 1402, 1819, 1834, 2546
Bst6I	CTCTTC	4 cut(s)	1617, 1689, 2358, 2517
BstAPI	GCANNNNNTGC	1 cut(s)	1856
BstAUI	TGTACA	1 cut(s)	1864
BstBI	TTCGAA	1 cut(s)	374
BstC8I	GCNNGC	6 cut(s)	383, 888, 1077, 1552, 1914, 2347
BstDSI	CCRYGG	1 cut(s)	1558
BstF5I	GGATG	6 cut(s)	19, 164, 427, 1030, 1368, 2144
BstFNI	CGCG	2 cut(s)	55, 2446
BstHHI	GCGC	2 cut(s)	57, 1421
BstMAI	GTCTC	4 cut(s)	1071, 1224, 1691, 1998
BstMWI	GCNNNNNNNGC	9 cut(s)	305, 594, 1034, 1856, 2097, 2306, 2339, 2342, 2533
BstNI	CCWGG	8 cut(s)	246, 537, 555, 705, 783, 1002, 1163, 1296
BstNSI	RCATGY	3 cut(s)	890, 1079, 1100
BstSFI	CTRYAG	3 cut(s)	822, 1191, 1548
BstSLI	GKGCMC	2 cut(s)	341, 2078
BstUI	CGCG	2 cut(s)	55, 2446
BstV2I	GAAGAC	1 cut(s)	2275
BstX2I	RGATCY	6 cut(s)	715, 1298, 2034, 2114, 2397, 2467
BstXI	CCANNNNNNTGG	2 cut(s)	599, 864
BstYI	RGATCY	6 cut(s)	715, 1298, 2034, 2114, 2397, 2467
BsuI	GTATCC	1 cut(s)	23
BsuRI	GGCC	6 cut(s)	524, 1120, 1204, 1279, 2076, 2100
BtgI	CCRYGG	1 cut(s)	1558
BtgZI	GCGATG	1 cut(s)	569
BtsCI	GGATG	6 cut(s)	19, 164, 427, 1030, 1368, 2144
BtsI	GCAGTG	1 cut(s)	2078
BtsIMutI	CAGTG	4 cut(s)	653, 1407, 2078, 2370
BveI	ACCTGC	1 cut(s)	313
Cac8I	GCNNGC	6 cut(s)	383, 888, 1077, 1552, 1914, 2347
CciI	TCATGA	1 cut(s)	1642
CfoI	GCGC	2 cut(s)	57, 1421
Cfr13I	GGNCC	9 cut(s)	248, 522, 557, 1202, 1277, 1292, 1613, 2074, 2075
Cfr9I	CCCGGG	1 cut(s)	334
CseI	GACGC	1 cut(s)	263
CsiI	ACCWGGT	1 cut(s)	553
Csp6I	GTAC	5 cut(s)	237, 503, 1865, 2000, 2585
CviAII	CATG	8 cut(s)	386, 887, 1076, 1097, 1493, 1643, 2102, 2270
CviQI	GTAC	5 cut(s)	237, 503, 1865, 2000, 2585
DraI	TTTAAA	1 cut(s)	1782
EaeI	YGGCCR	1 cut(s)	2098
Eam1104I	CTCTTC	4 cut(s)	1617, 1689, 2358, 2517
EarI	CTCTTC	4 cut(s)	1617, 1689, 2358, 2517
Ecl136II	GAGCTC	3 cut(s)	879, 2053, 2368
Eco130I	CCWWGG	2 cut(s)	525, 1719
Eco24I	GRGCYC	5 cut(s)	641, 881, 2055, 2078, 2370
Eco31I	GGTCTC	1 cut(s)	1998
Eco47I	GGWCC	4 cut(s)	248, 557, 1292, 1613
Eco53kI	GAGCTC	3 cut(s)	879, 2053, 2368
Eco57I	CTGAAG	1 cut(s)	2382
Eco88I	CYCGRG	2 cut(s)	334, 1221
EcoICRI	GAGCTC	3 cut(s)	879, 2053, 2368
EcoO109I	RGGNCCY	3 cut(s)	522, 1613, 2074
EcoRII	CCWGG	8 cut(s)	244, 535, 553, 703, 781, 1000, 1161, 1294
EcoT14I	CCWWGG	2 cut(s)	525, 1719
EcoT22I	ATGCAT	4 cut(s)	892, 1077, 2146, 2193
EcoT38I	GRGCYC	5 cut(s)	641, 881, 2055, 2078, 2370
ErhI	CCWWGG	2 cut(s)	525, 1719
FaeI	CATG	8 cut(s)	389, 890, 1079, 1100, 1496, 1646, 2105, 2273
FaqI	GGGAC	5 cut(s)	543, 881, 1180, 1599, 1748
FatI	CATG	8 cut(s)	385, 886, 1075, 1096, 1492, 1642, 2101, 2269
FauI	CCCGC	1 cut(s)	2464
FauNDI	CATATG	3 cut(s)	451, 1288, 1338
FbaI	TGATCA	1 cut(s)	2266
FokI	GGATG	6 cut(s)	6, 151, 434, 1037, 1375, 2131
FriOI	GRGCYC	5 cut(s)	641, 881, 2055, 2078, 2370
FspBI	CTAG	4 cut(s)	1149, 2306, 2568, 2620
GlaI	GCGC	2 cut(s)	56, 1420
GsaI	CCCAGC	2 cut(s)	1425, 2087
GsuI	CTGGAG	3 cut(s)	1122, 1263, 1494
HaeIII	GGCC	6 cut(s)	524, 1120, 1204, 1279, 2076, 2100
HapII	CCGG	3 cut(s)	335, 1617, 2609
HgaI	GACGC	1 cut(s)	263
HhaI	GCGC	2 cut(s)	57, 1421
Hin1II	CATG	8 cut(s)	389, 890, 1079, 1100, 1496, 1646, 2105, 2273
Hin6I	GCGC	2 cut(s)	55, 1419
HinP1I	GCGC	2 cut(s)	55, 1419
HincII	GTYRAC	1 cut(s)	1408
HindII	GTYRAC	1 cut(s)	1408
HindIII	AAGCTT	3 cut(s)	1467, 2012, 2590
HinfI	GANTC	8 cut(s)	123, 443, 803, 899, 974, 1257, 1903, 2493
HpaII	CCGG	3 cut(s)	335, 1617, 2609
Hpy166II	GTNNAC	5 cut(s)	239, 1408, 1522, 1767, 1865
Hpy8I	GTNNAC	5 cut(s)	239, 1408, 1522, 1767, 1865
HpyAV	CCTTC	6 cut(s)	534, 1660, 2064, 2192, 2312, 2408
HpyCH4III	ACNGT	6 cut(s)	936, 949, 1402, 1819, 1834, 2546
HpyCH4IV	ACGT	2 cut(s)	574, 1737
HpyF10VI	GCNNNNNNNGC	9 cut(s)	305, 594, 1034, 1856, 2097, 2306, 2339, 2342, 2533
HpySE526I	ACGT	2 cut(s)	574, 1737
Hsp92II	CATG	8 cut(s)	389, 890, 1079, 1100, 1496, 1646, 2105, 2273
HspAI	GCGC	2 cut(s)	55, 1419
KflI	GGGWCCC	1 cut(s)	1613
Kpn2I	TCCGGA	1 cut(s)	2608
Ksp22I	TGATCA	1 cut(s)	2266
LguI	GCTCTTC	2 cut(s)	2358, 2517
LmnI	GCTCC	6 cut(s)	602, 884, 1366, 1559, 2058, 2395
MabI	ACCWGGT	1 cut(s)	553
MaeI	CTAG	4 cut(s)	1149, 2306, 2568, 2620
MaeII	ACGT	2 cut(s)	574, 1737
MaeIII	GTNAC	1 cut(s)	1319
MbiI	CCGCTC	1 cut(s)	2527
MboII	GAAGA	8 cut(s)	348, 725, 1634, 1706, 2117, 2275, 2375, 2534
MfeI	CAATTG	2 cut(s)	978, 1935
MflI	RGATCY	6 cut(s)	715, 1298, 2034, 2114, 2397, 2467
MhlI	GDGCHC	6 cut(s)	341, 641, 881, 2055, 2078, 2370
MlsI	TGGCCA	1 cut(s)	2100
MluNI	TGGCCA	1 cut(s)	2100
MlyI	GAGTC	3 cut(s)	797, 1266, 1897
MmeI	TCCRAC	2 cut(s)	418, 923
Mox20I	TGGCCA	1 cut(s)	2100
Mph1103I	ATGCAT	4 cut(s)	892, 1077, 2146, 2193
MroI	TCCGGA	1 cut(s)	2608
MscI	TGGCCA	1 cut(s)	2100
MseI	TTAA	5 cut(s)	110, 1233, 1781, 1968, 2186
MslI	CAYNNNNRTG	5 cut(s)	597, 862, 1357, 1679, 2106
Msp20I	TGGCCA	1 cut(s)	2100
MspA1I	CMGCKG	2 cut(s)	597, 2333
MspI	CCGG	3 cut(s)	335, 1617, 2609
MunI	CAATTG	2 cut(s)	978, 1935
Mva1269I	GAATGC	1 cut(s)	2146
MvaI	CCWGG	8 cut(s)	246, 537, 555, 705, 783, 1002, 1163, 1296
MvnI	CGCG	2 cut(s)	55, 2446
MwoI	GCNNNNNNNGC	9 cut(s)	305, 594, 1034, 1856, 2097, 2306, 2339, 2342, 2533
NciI	CCSGG	3 cut(s)	335, 336, 1617
NdeI	CATATG	3 cut(s)	451, 1288, 1338
NlaIII	CATG	8 cut(s)	389, 890, 1079, 1100, 1496, 1646, 2105, 2273
NmeAIII	GCCGAG	1 cut(s)	692
NmuCI	GTSAC	1 cut(s)	1319
NsiI	ATGCAT	4 cut(s)	892, 1077, 2146, 2193
NspI	RCATGY	3 cut(s)	890, 1079, 1100
NspV	TTCGAA	1 cut(s)	374
OliI	CACNNNNGTG	2 cut(s)	597, 862
PaeI	GCATGC	2 cut(s)	890, 1079
PaeR7I	CTCGAG	1 cut(s)	1221
PagI	TCATGA	1 cut(s)	1642
PaqCI	CACCTGC	1 cut(s)	313
PciSI	GCTCTTC	2 cut(s)	2358, 2517
PctI	GAATGC	1 cut(s)	2146
PfeI	GAWTC	5 cut(s)	123, 443, 899, 974, 2493
PflMI	CCANNNNNTGG	1 cut(s)	200
PfoI	TCCNGGA	2 cut(s)	1000, 1294
PleI	GAGTC	3 cut(s)	797, 1265, 1897
PpsI	GAGTC	3 cut(s)	797, 1265, 1897
PpuMI	RGGWCCY	1 cut(s)	1613
Psp124BI	GAGCTC	3 cut(s)	881, 2055, 2370
Psp5II	RGGWCCY	1 cut(s)	1613
Psp6I	CCWGG	8 cut(s)	244, 535, 553, 703, 781, 1000, 1161, 1294
PspFI	CCCAGC	2 cut(s)	1421, 2083
PspGI	CCWGG	8 cut(s)	244, 535, 553, 703, 781, 1000, 1161, 1294
PspOMI	GGGCCC	1 cut(s)	2074
PspPI	GGNCC	9 cut(s)	248, 522, 557, 1202, 1277, 1292, 1613, 2074, 2075
PspPPI	RGGWCCY	1 cut(s)	1613
PstI	CTGCAG	1 cut(s)	1552
PsuI	RGATCY	6 cut(s)	715, 1298, 2034, 2114, 2397, 2467
PvuII	CAGCTG	2 cut(s)	597, 2333
RsaI	GTAC	5 cut(s)	238, 504, 1866, 2001, 2586
RsaNI	GTAC	5 cut(s)	237, 503, 1865, 2000, 2585
RseI	CAYNNNNRTG	5 cut(s)	597, 862, 1357, 1679, 2106
SacI	GAGCTC	3 cut(s)	881, 2055, 2370
SapI	GCTCTTC	2 cut(s)	2358, 2517
SaqAI	TTAA	5 cut(s)	110, 1233, 1781, 1968, 2186
Sau96I	GGNCC	9 cut(s)	248, 522, 557, 1202, 1277, 1292, 1613, 2074, 2075
SchI	GAGTC	3 cut(s)	797, 1266, 1897
SduI	GDGCHC	6 cut(s)	341, 641, 881, 2055, 2078, 2370
SexAI	ACCWGGT	1 cut(s)	553
SfcI	CTRYAG	3 cut(s)	822, 1191, 1548
Sfr274I	CTCGAG	1 cut(s)	1221
SfuI	TTCGAA	1 cut(s)	374
SinI	GGWCC	4 cut(s)	248, 557, 1292, 1613
SlaI	CTCGAG	1 cut(s)	1221
SmaI	CCCGGG	1 cut(s)	336
SmiI	ATTTAAAT	1 cut(s)	1782
SmiMI	CAYNNNNRTG	5 cut(s)	597, 862, 1357, 1679, 2106
SmlI	CTYRAG	4 cut(s)	805, 1221, 1602, 1995
SmoI	CTYRAG	4 cut(s)	805, 1221, 1602, 1995
SphI	GCATGC	2 cut(s)	890, 1079
SsiI	CCGC	6 cut(s)	14, 2253, 2342, 2446, 2457, 2527
SspI	AATATT	1 cut(s)	616
SspMI	CTAG	4 cut(s)	1149, 2306, 2568, 2620
SstI	GAGCTC	3 cut(s)	881, 2055, 2370
StyI	CCWWGG	2 cut(s)	525, 1719
SwaI	ATTTAAAT	1 cut(s)	1782
TaaI	ACNGT	6 cut(s)	936, 949, 1402, 1819, 1834, 2546
TaiI	ACGT	2 cut(s)	577, 1740
TaqI	TCGA	2 cut(s)	374, 1222
TatI	WGTACW	2 cut(s)	236, 1864
TauI	GCSGC	3 cut(s)	2255, 2345, 2449
TfiI	GAWTC	5 cut(s)	123, 443, 899, 974, 2493
Tru1I	TTAA	5 cut(s)	110, 1233, 1781, 1968, 2186
Tru9I	TTAA	5 cut(s)	110, 1233, 1781, 1968, 2186
TscAI	CASTG	4 cut(s)	653, 1407, 2085, 2377
TseFI	GTSAC	1 cut(s)	1319
Tsp45I	GTSAC	1 cut(s)	1319
TspDTI	ATGAA	9 cut(s)	402, 1145, 1659, 1887, 1974, 2051, 2118, 2275, 2331
TspMI	CCCGGG	1 cut(s)	334
TspRI	CASTG	4 cut(s)	653, 1407, 2085, 2377
Van91I	CCANNNNNTGG	1 cut(s)	200
VpaK11BI	GGWCC	4 cut(s)	248, 557, 1292, 1613
XapI	RAATTY	3 cut(s)	87, 546, 1985
XbaI	TCTAGA	1 cut(s)	1148
XceI	RCATGY	3 cut(s)	890, 1079, 1100
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1499
XhoI	CTCGAG	1 cut(s)	1221
XmaI	CCCGGG	1 cut(s)	334
XspI	CTAG	4 cut(s)	1149, 2306, 2568, 2620
Zsp2I	ATGCAT	4 cut(s)	892, 1077, 2146, 2193

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.