Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004876.1

Orthogroup ID

OG0005145

Physical Location & Seq

Genomic Coordinates Forward (+)

30131 .. 33668

Gene Structure 3538 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004876.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2400 bp

atgtcgaatccaccaccgcaaccttcccttggatactcgatcagtttcagtagtccctcacagtcagacacaccatcacctgaccctgctaaaaatgccattcctcctcctcctccaccttcggtttcgcccggacaatccagattccctcctccaccaaagtttcagctagatcaatttccttctccctcggtcaaaaccccgaacgggccgtcaccggctagtggtggtggattgaaaaccggcagccccattcctcatttgagtactccccccggacctcccgtctttacttcccctgtccgtcccgctgctgtgccttttcgtgcttcgcctgttactcctcagccggttgctttctctacggccgcatccttgccaacgtcttcgcctgtcaacttttcgaatggatcacttgaattggaccaccaactgtccaatgtcacagacgatgatgcagtttctgttggtgaaccaccgtatgtcttattctcagctcataaggtgttgaaacagaagaaacaagcaaatgtcccaagtttgggttttggggcattggtttcccctgggagggaaatttctccaggtcctcaaataatacaacgtgatcctcatcgctgccatagttgtggagcttatgcaaatatctactgcaacattttgctgggctcaggtcagtggcagtgtgtaatctgccgagaattgaatggtagtgagggggaatatatagctcctagcaaggaagatcttgccaactttccagagttgtcatctcccatggttgattatgttcaaactgcgaacaatagacctggttttgttccagtttctgattctagaatgtctgcaccccttgttcttgttatagacgagtgtttagatgaaccacatctctggcatttacagagctccttgcatgcctttgtcgattcacttccccctacaacgagaattggaatagtactatatggtcgcacagtatcagtttatgatttttcagaggaatcagttgcatctgctgatgtgcttccaggcgacaaatcaccatgccaggagtccttgaaggcattgatatatggaaccggtatatatttgtctccaatgcatgcttcactgcctgtagcacatgccatattctcatcattaaggccgtataaattgaacattccagaagcttctagagaccggtgccttggcacagcagttgaggttgctcttgctataattcaaggcccatcagcagacatttctcgaggggtaataaaaaggtcaggaggtaatagcagagtcatagtttgtgctggtggacccaatacttatggtcctggatctgttcctcattctttcagtcacccaaattatgctcacttggaaaagaccgcattgaaatggatggagcatctgggtcaagaggcacaccgacacaatacagtagttgatattctttgcgctgggcaatgccctgtaagggttcctgttttgcagcctcttgcaaaagcttctgggggcgttttcgttctccatgatgactttggtgaagcctttggagtgaacttgcaaagggcatccatcagggcagcaggcttccgtgggttcttggcaattcgctgttcagatgatattctcataacccaagttgtgggtcctggtgaagaggcacatgtagacactcatgaaacgttcaaaaatgacacatctctttacatacaaatgccaagtgtcgaagaaacacagagcttctcactctccttggaaaataagagggacattaggactgagtatgtatatttccagtttacaactcagtttctgaatgtttatcaagctgatatatcaagagtaataactgttagattgccaacagttgatagtgtttcagcatatcttgagagtgttcaagaggaagtggcagcagttcttattgcaaagaggactctcttgcgagccaaaaacagttctgatgcaattgatatgcaatcaacaatagatgaaagaattaaagacattgctttaaaatatggttctcaagtaccaaaatcaaagcaatatcgtttcccaaaggagatgtctttattaccagagcacctgtttcatcttagaaggggcccacttttgggaaacattgttggccatgaagatgagaggtctgtgttacggaacttgtttctgaatgcatcctttgatctgtctctgcgaatggttgcgcctcgttgtctaatgcatcgggaagggggtactttcgaggaactaccagcttatgaccttgctatgcagtctgatgcagcagttgtacttgatcatggcacagatgtcttcatttggttgcttttaagatgggaggccaagtgcagattagagcttatggtccctagaaaacttagtactggtgatatgctttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Gelsolin Sec23_BS Sec23_helical Sec23_trunk zf-Sec23_Sec24

Protein Analysis

799

Amino Acids

86.81

Weight (kDa)

6.13

Isoelectric Point (pI)

57.27

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005145)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G01810 AT4G01810 AT4G01810
fragaria_vesca	FvH4_1g26250 FvH4_1g26250 FvH4_1g26250 FvH4_1g26250 FvH4_1g26250
malus_domestica	MD09G1290300.v1.1 MD17G1284900.v1.1
prunus_persica	Prupe.3G002800_v2.0.a1 Prupe.3G002800_v2.0.a1 Prupe.3G002800_v2.0.a1 Prupe.3G002800_v2.0.a1
pyrus_communis	pycom09g19810 pycom17g28070
rosa_chinensis	RchiOBHm_Chr3g0485911
rosa_laevigata	RLG00000023123
rosa_multiflora	Rmu_sc0004876.1_g000006 Rmu_sc0012870.1_g000011
rosa_roxburghii	Rroxscaffold_6G00396210
rosa_rugosa	Rorug03G0222000 Rorug03G0222100 Rorug03G0222200 Rorug03G0222300
rosa_samantha	Rh3AG271700 Rh3BG306700 Rh3DG301400
rosa_wichuraiana	Rw0G015510 Rw3G024140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1188
AccB7I	CCANNNNNTGG	1 cut(s)	1639
AccI	GTMKAC	1 cut(s)	1665
AciI	CCGC	4 cut(s)	17, 309, 369, 1380
AclI	AACGTT	1 cut(s)	1679
AclWI	GGATC	3 cut(s)	418, 602, 1336
AcoI	YGGCCR	2 cut(s)	366, 2128
AcsI	RAATTY	1 cut(s)	576
AfaI	GTAC	6 cut(s)	268, 963, 2031, 2236, 2292, 2383
AflIII	ACRYGT	1 cut(s)	1660
AgeI	ACCGGT	2 cut(s)	1082, 1185
AhdI	GACNNNNNGTC	1 cut(s)	284
AjnI	CCWGG	7 cut(s)	565, 583, 811, 1030, 1050, 1324, 1645
AjuI	GAANNNNNNNTTGG	2 cut(s)	1093, 1125
Alw21I	GWGCWC	2 cut(s)	911, 2085
Alw26I	GTCTC	3 cut(s)	1101, 1176, 2193
AlwI	GGATC	3 cut(s)	418, 602, 1336
AlwNI	CAGNNNCTG	3 cut(s)	464, 830, 1810
Ama87I	CYCGRG	1 cut(s)	1251
AoxI	GGCC	7 cut(s)	209, 366, 1148, 1231, 2104, 2128, 2340
ApaI	GGGCCC	1 cut(s)	2108
ApeKI	GCWGC	7 cut(s)	246, 311, 618, 1483, 1577, 1910, 2282
ApoI	RAATTY	1 cut(s)	576
ArsI	GACNNNNNNTTYG	4 cut(s)	197, 229, 2051, 2083
AsiGI	ACCGGT	2 cut(s)	1082, 1185
AspLEI	GCGC	2 cut(s)	1451, 2206
AsuC2I	CCSGG	2 cut(s)	132, 276
AsuHPI	GGTGA	8 cut(s)	69, 207, 482, 1035, 1343, 1547, 1661, 2399
AsuII	TTCGAA	1 cut(s)	404
AvaI	CYCGRG	1 cut(s)	1251
AvaII	GGWCC	7 cut(s)	278, 424, 587, 1307, 1322, 1643, 2365
BaeGI	GKGCMC	1 cut(s)	2108
BalI	TGGCCA	1 cut(s)	2130
BanI	GGYRCC	1 cut(s)	1188
BanII	GRGCYC	3 cut(s)	671, 911, 2108
BbsI	GAAGAC	2 cut(s)	378, 2305
Bbv12I	GWGCWC	2 cut(s)	911, 2085
BbvCI	CCTCAGC	1 cut(s)	345
BbvI	GCAGC	7 cut(s)	258, 298, 605, 1495, 1589, 1922, 2294
BccI	CCATC	5 cut(s)	82, 1243, 1387, 1577, 2328
BceAI	ACGGC	3 cut(s)	196, 381, 1135
BciT130I	CCWGG	7 cut(s)	567, 585, 813, 1032, 1052, 1326, 1647
BciVI	GTATCC	1 cut(s)	26
BclI	TGATCA	1 cut(s)	2296
BcnI	CCSGG	2 cut(s)	132, 276
BcoDI	GTCTC	3 cut(s)	1101, 1176, 2193
BfaI	CTAG	6 cut(s)	170, 222, 735, 837, 1179, 2370
BfmI	CTRYAG	1 cut(s)	1119
BfuI	GTATCC	1 cut(s)	26
BglII	AGATCT	1 cut(s)	745
BisI	GCNGC	8 cut(s)	247, 312, 369, 619, 1484, 1578, 1911, 2283
BlsI	GCNGC	8 cut(s)	248, 313, 370, 620, 1485, 1579, 1912, 2284
BmcAI	AGTACT	3 cut(s)	268, 963, 2383
Bme1390I	CCNGG	9 cut(s)	132, 276, 567, 585, 813, 1032, 1052, 1326, 1647
Bme18I	GGWCC	7 cut(s)	278, 424, 587, 1307, 1322, 1643, 2365
BmeRI	GACNNNNNGTC	1 cut(s)	284
BmeT110I	CYCGRG	1 cut(s)	1251
BmiI	GGNNCC	8 cut(s)	1081, 1190, 1309, 1473, 1644, 2105, 2106, 2367
BmrFI	CCNGG	9 cut(s)	132, 276, 567, 585, 813, 1032, 1052, 1326, 1647
BmsI	GCATC	9 cut(s)	380, 445, 1022, 1408, 1574, 1951, 2183, 2230, 2269
BpiI	GAAGAC	2 cut(s)	378, 2305
BpmI	CTGGAG	1 cut(s)	567
Bpu10I	CCTNAGC	2 cut(s)	345, 670
Bpu14I	TTCGAA	1 cut(s)	404
BpuEI	CTTGAG	2 cut(s)	1907, 2010
BpuMI	CCSGG	2 cut(s)	132, 276
BsaBI	GATNNNNATC	1 cut(s)	612
BsaI	GGTCTC	1 cut(s)	1176
BsaJI	CCNNGG	9 cut(s)	28, 189, 274, 565, 566, 777, 1192, 1588, 1749
BsaWI	WCCGGW	2 cut(s)	1082, 1185
BsaXI	ACNNNNNCTCC	2 cut(s)	2330, 2360
Bse118I	RCCGGY	5 cut(s)	217, 242, 349, 1082, 1185
Bse1I	ACTGG	3 cut(s)	824, 1792, 2389
Bse3DI	GCAATG	2 cut(s)	1463, 2004
Bse8I	GATNNNNATC	1 cut(s)	612
BseBI	CCWGG	7 cut(s)	567, 585, 813, 1032, 1052, 1326, 1647
BseDI	CCNNGG	9 cut(s)	28, 189, 274, 565, 566, 777, 1192, 1588, 1749
BseGI	GGATG	4 cut(s)	371, 1398, 1565, 2174
BseJI	GATNNNNATC	1 cut(s)	612
BseMI	GCAATG	2 cut(s)	1463, 2004
BseMII	CTCAG	5 cut(s)	359, 507, 684, 1767, 1817
BseNI	ACTGG	3 cut(s)	824, 1792, 2389
BseRI	GAGGAG	5 cut(s)	96, 99, 102, 141, 333
BseSI	GKGCMC	1 cut(s)	2108
BseX3I	CGGCCG	1 cut(s)	366
BseXI	GCAGC	7 cut(s)	258, 298, 605, 1495, 1589, 1922, 2294
BseYI	CCCAGC	2 cut(s)	664, 1451
BsgI	GTGCAG	2 cut(s)	831, 2368
Bsh1285I	CGRYCG	1 cut(s)	369
BshFI	GGCC	7 cut(s)	211, 368, 1150, 1233, 2106, 2130, 2342
BshNI	GGYRCC	1 cut(s)	1188
BshTI	ACCGGT	2 cut(s)	1082, 1185
BsiEI	CGRYCG	1 cut(s)	369
BsiHKAI	GWGCWC	2 cut(s)	911, 2085
BsiHKCI	CYCGRG	1 cut(s)	1251
BsiSI	CCGG	7 cut(s)	132, 218, 243, 276, 350, 1083, 1186
BslFI	GGGAC	5 cut(s)	39, 291, 518, 1778, 2351
BsmAI	GTCTC	3 cut(s)	1101, 1176, 2193
BsmFI	GGGAC	5 cut(s)	39, 291, 518, 1778, 2351
BsmI	GAATGC	1 cut(s)	2176
BsnI	GGCC	7 cut(s)	211, 368, 1150, 1233, 2106, 2130, 2342
Bso31I	GGTCTC	1 cut(s)	1176
BsoBI	CYCGRG	1 cut(s)	1251
Bsp119I	TTCGAA	1 cut(s)	404
Bsp120I	GGGCCC	1 cut(s)	2104
Bsp1286I	GDGCHC	4 cut(s)	671, 911, 2085, 2108
Bsp143I	GATC	8 cut(s)	39, 172, 410, 607, 745, 1328, 2182, 2296
Bsp19I	CCATGG	1 cut(s)	777
BspACI	CCGC	4 cut(s)	17, 309, 369, 1380
BspANI	GGCC	7 cut(s)	211, 368, 1150, 1233, 2106, 2130, 2342
BspCNI	CTCAG	5 cut(s)	358, 506, 683, 1768, 1816
BspHI	TCATGA	1 cut(s)	1672
BspLI	GGNNCC	8 cut(s)	1081, 1190, 1309, 1473, 1644, 2105, 2106, 2367
BspPI	GGATC	3 cut(s)	418, 602, 1336
BspT104I	TTCGAA	1 cut(s)	404
BspT107I	GGYRCC	1 cut(s)	1188
BspTNI	GGTCTC	1 cut(s)	1176
BsrDI	GCAATG	2 cut(s)	1463, 2004
BsrFI	RCCGGY	5 cut(s)	217, 242, 349, 1082, 1185
BsrI	ACTGG	3 cut(s)	824, 1792, 2389
BssAI	RCCGGY	5 cut(s)	217, 242, 349, 1082, 1185
BssECI	CCNNGG	9 cut(s)	28, 189, 274, 565, 566, 777, 1192, 1588, 1749
BssMI	GATC	8 cut(s)	39, 172, 410, 607, 745, 1328, 2182, 2296
BssT1I	CCWWGG	4 cut(s)	28, 777, 1192, 1749
Bst2UI	CCWGG	7 cut(s)	567, 585, 813, 1032, 1052, 1326, 1647
Bst4CI	ACNGT	8 cut(s)	63, 435, 480, 979, 1432, 1849, 1864, 1955
Bst6I	CTCTTC	1 cut(s)	1647
BstBI	TTCGAA	1 cut(s)	404
BstC8I	GCNNGC	4 cut(s)	918, 1107, 1582, 1944
BstDEI	CTNAG	7 cut(s)	345, 493, 670, 1776, 1803, 2096, 2378
BstDSI	CCRYGG	2 cut(s)	777, 1588
BstF5I	GGATG	4 cut(s)	371, 1398, 1565, 2174
BstHHI	GCGC	2 cut(s)	1451, 2206
BstKTI	GATC	8 cut(s)	42, 175, 413, 610, 748, 1331, 2185, 2299
BstMAI	GTCTC	3 cut(s)	1101, 1176, 2193
BstMBI	GATC	8 cut(s)	39, 172, 410, 607, 745, 1328, 2182, 2296
BstMCI	CGRYCG	1 cut(s)	369
BstMWI	GCNNNNNNNGC	1 cut(s)	95
BstNI	CCWGG	7 cut(s)	567, 585, 813, 1032, 1052, 1326, 1647
BstNSI	RCATGY	4 cut(s)	920, 1109, 1130, 1664
BstSCI	CCNGG	9 cut(s)	130, 274, 565, 583, 811, 1030, 1050, 1324, 1645
BstSFI	CTRYAG	1 cut(s)	1119
BstSLI	GKGCMC	1 cut(s)	2108
BstV1I	GCAGC	7 cut(s)	258, 298, 605, 1495, 1589, 1922, 2294
BstV2I	GAAGAC	2 cut(s)	378, 2305
BstX2I	RGATCY	2 cut(s)	745, 1328
BstXI	CCANNNNNNTGG	2 cut(s)	629, 894
BstYI	RGATCY	2 cut(s)	745, 1328
BstZI	CGGCCG	1 cut(s)	366
BsuI	GTATCC	1 cut(s)	26
BsuRI	GGCC	7 cut(s)	211, 368, 1150, 1233, 2106, 2130, 2342
BtgI	CCRYGG	2 cut(s)	777, 1588
BtgZI	GCGATG	1 cut(s)	599
BtsCI	GGATG	4 cut(s)	371, 1398, 1565, 2174
BtsI	GCAGTG	2 cut(s)	689, 1112
BtsIMutI	CAGTG	3 cut(s)	683, 689, 1112
Cac8I	GCNNGC	4 cut(s)	918, 1107, 1582, 1944
CaiI	CAGNNNCTG	3 cut(s)	464, 830, 1810
CciI	TCATGA	1 cut(s)	1672
CfoI	GCGC	2 cut(s)	1451, 2206
Cfr10I	RCCGGY	5 cut(s)	217, 242, 349, 1082, 1185
CsiI	ACCWGGT	1 cut(s)	811
Csp6I	GTAC	6 cut(s)	267, 962, 2030, 2235, 2291, 2382
CspAI	ACCGGT	2 cut(s)	1082, 1185
CviQI	GTAC	6 cut(s)	267, 962, 2030, 2235, 2291, 2382
DdeI	CTNAG	7 cut(s)	345, 493, 670, 1776, 1803, 2096, 2378
DpnI	GATC	8 cut(s)	41, 174, 412, 609, 747, 1330, 2184, 2298
DpnII	GATC	8 cut(s)	39, 172, 410, 607, 745, 1328, 2182, 2296
DraI	TTTAAA	1 cut(s)	2013
DriI	GACNNNNNGTC	1 cut(s)	284
EaeI	YGGCCR	2 cut(s)	366, 2128
EagI	CGGCCG	1 cut(s)	366
Eam1104I	CTCTTC	1 cut(s)	1647
Eam1105I	GACNNNNNGTC	1 cut(s)	284
EarI	CTCTTC	1 cut(s)	1647
Ecl136II	GAGCTC	1 cut(s)	909
EclXI	CGGCCG	1 cut(s)	366
Eco130I	CCWWGG	4 cut(s)	28, 777, 1192, 1749
Eco24I	GRGCYC	3 cut(s)	671, 911, 2108
Eco31I	GGTCTC	1 cut(s)	1176
Eco47I	GGWCC	7 cut(s)	278, 424, 587, 1307, 1322, 1643, 2365
Eco52I	CGGCCG	1 cut(s)	366
Eco53kI	GAGCTC	1 cut(s)	909
Eco88I	CYCGRG	1 cut(s)	1251
EcoICRI	GAGCTC	1 cut(s)	909
EcoO109I	RGGNCCY	3 cut(s)	587, 1643, 2104
EcoRII	CCWGG	7 cut(s)	565, 583, 811, 1030, 1050, 1324, 1645
EcoT14I	CCWWGG	4 cut(s)	28, 777, 1192, 1749
EcoT22I	ATGCAT	3 cut(s)	1107, 2176, 2223
EcoT38I	GRGCYC	3 cut(s)	671, 911, 2108
ErhI	CCWWGG	4 cut(s)	28, 777, 1192, 1749
FaqI	GGGAC	5 cut(s)	39, 291, 518, 1778, 2351
FauI	CCCGC	1 cut(s)	316
FbaI	TGATCA	1 cut(s)	2296
FblI	GTMKAC	1 cut(s)	1665
Fnu4HI	GCNGC	8 cut(s)	247, 312, 369, 619, 1484, 1578, 1911, 2283
FokI	GGATG	4 cut(s)	358, 1405, 1552, 2161
FriOI	GRGCYC	3 cut(s)	671, 911, 2108
Fsp4HI	GCNGC	8 cut(s)	247, 312, 369, 619, 1484, 1578, 1911, 2283
FspBI	CTAG	6 cut(s)	170, 222, 735, 837, 1179, 2370
GlaI	GCGC	2 cut(s)	1450, 2205
GluI	GCNGC	8 cut(s)	247, 312, 369, 619, 1484, 1578, 1911, 2283
GsaI	CCCAGC	2 cut(s)	668, 1455
GsuI	CTGGAG	1 cut(s)	567
HaeIII	GGCC	7 cut(s)	211, 368, 1150, 1233, 2106, 2130, 2342
HapII	CCGG	7 cut(s)	132, 218, 243, 276, 350, 1083, 1186
HhaI	GCGC	2 cut(s)	1451, 2206
Hin6I	GCGC	2 cut(s)	1449, 2204
HinP1I	GCGC	2 cut(s)	1449, 2204
HincII	GTYRAC	1 cut(s)	397
HindII	GTYRAC	1 cut(s)	397
HindIII	AAGCTT	2 cut(s)	1173, 1497
HinfI	GANTC	8 cut(s)	7, 144, 833, 929, 1004, 1055, 1287, 1933
HpaII	CCGG	7 cut(s)	132, 218, 243, 276, 350, 1083, 1186
HphI	GGTGA	8 cut(s)	69, 207, 482, 1035, 1343, 1547, 1661, 2399
Hpy166II	GTNNAC	6 cut(s)	397, 473, 1307, 1552, 1666, 1797
Hpy188I	TCNGA	8 cut(s)	67, 832, 1000, 1615, 1812, 1960, 2169, 2278
Hpy8I	GTNNAC	6 cut(s)	397, 473, 1307, 1552, 1666, 1797
HpyAV	CCTTC	6 cut(s)	33, 129, 192, 1057, 2094, 2222
HpyCH4III	ACNGT	8 cut(s)	63, 435, 480, 979, 1432, 1849, 1864, 1955
HpyCH4IV	ACGT	3 cut(s)	383, 604, 1679
HpyF10VI	GCNNNNNNNGC	1 cut(s)	95
HpyF3I	CTNAG	7 cut(s)	345, 493, 670, 1776, 1803, 2096, 2378
HpySE526I	ACGT	3 cut(s)	383, 604, 1679
HspAI	GCGC	2 cut(s)	1449, 2204
Ksp22I	TGATCA	1 cut(s)	2296
Kzo9I	GATC	8 cut(s)	39, 172, 410, 607, 745, 1328, 2182, 2296
LmnI	GCTCC	4 cut(s)	632, 736, 914, 1396
Lsp1109I	GCAGC	7 cut(s)	258, 298, 605, 1495, 1589, 1922, 2294
LweI	GCATC	9 cut(s)	380, 445, 1022, 1408, 1574, 1951, 2183, 2230, 2269
MabI	ACCWGGT	1 cut(s)	811
MaeI	CTAG	6 cut(s)	170, 222, 735, 837, 1179, 2370
MaeII	ACGT	3 cut(s)	383, 604, 1679
MaeIII	GTNAC	5 cut(s)	213, 337, 442, 1349, 2151
MalI	GATC	8 cut(s)	41, 174, 412, 609, 747, 1330, 2184, 2298
MboI	GATC	8 cut(s)	39, 172, 410, 607, 745, 1328, 2182, 2296
MboII	GAAGA	7 cut(s)	378, 529, 755, 1664, 1736, 2147, 2305
MfeI	CAATTG	1 cut(s)	1965
MflI	RGATCY	2 cut(s)	745, 1328
MhlI	GDGCHC	4 cut(s)	671, 911, 2085, 2108
MlsI	TGGCCA	1 cut(s)	2130
MluNI	TGGCCA	1 cut(s)	2130
MlyI	GAGTC	3 cut(s)	1064, 1296, 1927
Mox20I	TGGCCA	1 cut(s)	2130
Mph1103I	ATGCAT	3 cut(s)	1107, 2176, 2223
MscI	TGGCCA	1 cut(s)	2130
MseI	TTAA	4 cut(s)	1145, 1998, 2012, 2330
MslI	CAYNNNNRTG	4 cut(s)	627, 1387, 1709, 2136
Msp20I	TGGCCA	1 cut(s)	2130
MspA1I	CMGCKG	1 cut(s)	311
MspI	CCGG	7 cut(s)	132, 218, 243, 276, 350, 1083, 1186
MspR9I	CCNGG	9 cut(s)	132, 276, 567, 585, 813, 1032, 1052, 1326, 1647
MunI	CAATTG	1 cut(s)	1965
Mva1269I	GAATGC	1 cut(s)	2176
MvaI	CCWGG	7 cut(s)	567, 585, 813, 1032, 1052, 1326, 1647
MwoI	GCNNNNNNNGC	1 cut(s)	95
NciI	CCSGG	2 cut(s)	132, 276
NcoI	CCATGG	1 cut(s)	777
NdeII	GATC	8 cut(s)	39, 172, 410, 607, 745, 1328, 2182, 2296
NlaIV	GGNNCC	8 cut(s)	1081, 1190, 1309, 1473, 1644, 2105, 2106, 2367
NmeAIII	GCCGAG	1 cut(s)	722
NmuCI	GTSAC	3 cut(s)	213, 442, 1349
NsiI	ATGCAT	3 cut(s)	1107, 2176, 2223
NspI	RCATGY	4 cut(s)	920, 1109, 1130, 1664
NspV	TTCGAA	1 cut(s)	404
PaeI	GCATGC	2 cut(s)	920, 1109
PaeR7I	CTCGAG	1 cut(s)	1251
PagI	TCATGA	1 cut(s)	1672
PasI	CCCWGGG	1 cut(s)	566
PciI	ACATGT	1 cut(s)	1660
PctI	GAATGC	1 cut(s)	2176
PfeI	GAWTC	5 cut(s)	7, 144, 833, 929, 1004
PflMI	CCANNNNNTGG	1 cut(s)	1639
PfoI	TCCNGGA	1 cut(s)	1324
PinAI	ACCGGT	2 cut(s)	1082, 1185
PkrI	GCNGC	8 cut(s)	248, 313, 370, 620, 1485, 1579, 1912, 2284
PleI	GAGTC	3 cut(s)	1063, 1295, 1927
PpsI	GAGTC	3 cut(s)	1063, 1295, 1927
PpuMI	RGGWCCY	2 cut(s)	587, 1643
PscI	ACATGT	1 cut(s)	1660
Psp124BI	GAGCTC	1 cut(s)	911
Psp1406I	AACGTT	1 cut(s)	1679
Psp5II	RGGWCCY	2 cut(s)	587, 1643
Psp6I	CCWGG	7 cut(s)	565, 583, 811, 1030, 1050, 1324, 1645
PspFI	CCCAGC	2 cut(s)	664, 1451
PspGI	CCWGG	7 cut(s)	565, 583, 811, 1030, 1050, 1324, 1645
PspN4I	GGNNCC	8 cut(s)	1081, 1190, 1309, 1473, 1644, 2105, 2106, 2367
PspOMI	GGGCCC	1 cut(s)	2104
PspPPI	RGGWCCY	2 cut(s)	587, 1643
PstNI	CAGNNNCTG	3 cut(s)	464, 830, 1810
PsuI	RGATCY	2 cut(s)	745, 1328
RsaI	GTAC	6 cut(s)	268, 963, 2031, 2236, 2292, 2383
RsaNI	GTAC	6 cut(s)	267, 962, 2030, 2235, 2291, 2382
RseI	CAYNNNNRTG	4 cut(s)	627, 1387, 1709, 2136
SacI	GAGCTC	1 cut(s)	911
SaqAI	TTAA	4 cut(s)	1145, 1998, 2012, 2330
SatI	GCNGC	8 cut(s)	247, 312, 369, 619, 1484, 1578, 1911, 2283
Sau3AI	GATC	8 cut(s)	39, 172, 410, 607, 745, 1328, 2182, 2296
ScaI	AGTACT	3 cut(s)	268, 963, 2383
SchI	GAGTC	3 cut(s)	1064, 1296, 1927
ScrFI	CCNGG	9 cut(s)	132, 276, 567, 585, 813, 1032, 1052, 1326, 1647
SduI	GDGCHC	4 cut(s)	671, 911, 2085, 2108
SexAI	ACCWGGT	1 cut(s)	811
SfaNI	GCATC	9 cut(s)	380, 445, 1022, 1408, 1574, 1951, 2183, 2230, 2269
SfcI	CTRYAG	1 cut(s)	1119
Sfr274I	CTCGAG	1 cut(s)	1251
SfuI	TTCGAA	1 cut(s)	404
SinI	GGWCC	7 cut(s)	278, 424, 587, 1307, 1322, 1643, 2365
SlaI	CTCGAG	1 cut(s)	1251
SmiMI	CAYNNNNRTG	4 cut(s)	627, 1387, 1709, 2136
SmlI	CTYRAG	3 cut(s)	1251, 1886, 2025
SmoI	CTYRAG	3 cut(s)	1251, 1886, 2025
SphI	GCATGC	2 cut(s)	920, 1109
SsiI	CCGC	4 cut(s)	17, 309, 369, 1380
SspMI	CTAG	6 cut(s)	170, 222, 735, 837, 1179, 2370
SstI	GAGCTC	1 cut(s)	911
StyD4I	CCNGG	9 cut(s)	130, 274, 565, 583, 811, 1030, 1050, 1324, 1645
StyI	CCWWGG	4 cut(s)	28, 777, 1192, 1749
TaaI	ACNGT	8 cut(s)	63, 435, 480, 979, 1432, 1849, 1864, 1955
TaiI	ACGT	3 cut(s)	386, 607, 1682
TaqI	TCGA	7 cut(s)	5, 38, 404, 927, 1252, 1722, 2241
TaqII	GACCGA	1 cut(s)	181
TatI	WGTACW	4 cut(s)	266, 961, 2290, 2381
TauI	GCSGC	1 cut(s)	371
TfiI	GAWTC	5 cut(s)	7, 144, 833, 929, 1004
Tru1I	TTAA	4 cut(s)	1145, 1998, 2012, 2330
Tru9I	TTAA	4 cut(s)	1145, 1998, 2012, 2330
TscAI	CASTG	3 cut(s)	683, 689, 1119
TseFI	GTSAC	3 cut(s)	213, 442, 1349
TseI	GCWGC	7 cut(s)	246, 311, 618, 1483, 1577, 1910, 2282
Tsp45I	GTSAC	3 cut(s)	213, 442, 1349
TspDTI	ATGAA	6 cut(s)	897, 1689, 2004, 2081, 2148, 2305
TspGWI	ACGGA	3 cut(s)	293, 1577, 2170
TspRI	CASTG	3 cut(s)	683, 689, 1119
Van91I	CCANNNNNTGG	1 cut(s)	1639
VpaK11BI	GGWCC	7 cut(s)	278, 424, 587, 1307, 1322, 1643, 2365
XapI	RAATTY	1 cut(s)	576
XbaI	TCTAGA	2 cut(s)	836, 1178
XceI	RCATGY	4 cut(s)	920, 1109, 1130, 1664
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1529
XhoI	CTCGAG	1 cut(s)	1251
XmiI	GTMKAC	1 cut(s)	1665
XspI	CTAG	6 cut(s)	170, 222, 735, 837, 1179, 2370
ZrmI	AGTACT	3 cut(s)	268, 963, 2383
Zsp2I	ATGCAT	3 cut(s)	1107, 2176, 2223

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.