Rh3AG271700

transport protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3A
OG0005145
Physical Location & Seq
Reverse (-)
30961052 .. 30977719
16668 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3AG271700.1

Sequence Viewer

Length: 2436 bp
ATGTCGAATCCACCACCGCAACCTTCCCTTGGATACTCGATCAGTTTCAGTAGTCCCTCACAGTCAGACACACCATCACCTGACCCTGCTAAAAATGCCATTCCTCCTCCTCCTCCACCTTCGGTTTCGCCCGGACAATCCAGATTCCCTCCTCCACCAAAGTTTCAGCTAGATCAATTTCCTTCTCCCTCAGTCAAAACCCCGAACGGGCCGTCACCGGCTAGTGGTGGTGGATTGAAAACCGGCAGCCCCATTCCTCATTTGAGTACTCCCCCCGGACCTCCCGTCTTTACTTCCCCTGTCCGTCCCGCTGCTGTGCCTTTTCGTGCTTCACCTGTTACTCCTCAGCCGGTTGCTTTCTCTCCGGCCGCATCCTTGCCAACGTCTTCGCCTGTCAATTTTTCGAATGGATCACTTGAATTGGACCACCAACTGTCCAATGTCACAGACGATGATGCAGTTTCTGTTGGTGAACCACCGTATGTCTTATTCTCAGCTCATAAGGTGTTGAAACAGAAGAAACAAGCAAATGTCCCAAGTTTGGGTTTTGGGGCATTGGTTTCCCCTGGGAGGGAAATTTCTCCAGGTCCTCAAATAATACAACGTGATCCTCATCGCTGCCATAGTTGTGGAGCTTATGCAAATATCTACTGCAACATTTTGCTGGGCTCAGGTCAGTGGCAGTGTGTAATCTGCCGAGAATTGAATGGTAGTGAGGGGGAATATATAGCTCCTAGCAAGGAAGATCTTGCCAACTTTCCAGAGTTGTCATCTCCCATGGTTGATTATGTTCAAACTGCGAACAATAGACCTGGTTTTGTTCCAGTTTCTGATTCTAGAATGTCTGCACCCCTTGTTCTTGTTATAGACGAGTGTTTAGATGAACCACATCTCTGGCATTTACAGAGCTCCTTACATGCCTTTGTCGATTCACTTCCCCCTACAACGAGAATTGGAATAGTACTGTATGGTCGCACAGTATCAGTTTATGATTTTTCAGAGGAATCAGTTGCATCTGCTGATGTGCTTCCAGGCGACAAATCACCATGCCAGGAGTCCTTGAAGGCATTGATATATGGAACCGGTATATATTTGTCTCCAATGCATGCTTCACTGCCTGTAGCACATGCCATATTCTCATCATTAAGGCCGTATAAATTGAACATTCCAGAAGCTTCTAGAGACCGGTGCCTTGGCACAGCAGTTGAGGTTGCTCTTGCTATAATTCAAGGCCCATCAGCAGACATTTCTCGAGGGGTAATAAAAAGGTCAGGAGGTAATAGCAGAGTCATAGTTTGTGCTGGTGGACCCAGTACTTATGGTCCTGGATCTGTTCCTCATTCTTTCAGTCACCCAAATTATGCTCACTTGGAAAAGACTGCATTGAAATGGATGGAGCATCTGGGTCAAGAGGCACACCGACACAATACAGTAGTTGATATTCTTTGTGCTGGGCAATGCCCTGTAAGGGTTCCTGTTTTGCAGCCTCTTGCAAAAGCTTCTGGGGGCGTTTTCGTTCTCCATGATGACTTTGGTGAAGCCTTTGGAGTGAACTTGCAAAGGGCATCCACCAGGGCAGCAGGCTTCCGTGGGTTCTTGGCAATTCGCTGTTCAGATGATATTCTCATAACCCAAGTTGTGGGTCCTGGTGAAGAGGCACATGTAGACACTCATGAAACGTTCAAAAATGACACATCTCTTTACATACAAATGCCAAGTGTCGAAGAAACACAGAGCTTCTCACTCTCCTTGGAAAATAAGAGGGACATTAGGACTGAGTATGTATATTTCCAGTTTACAACTCAGTTTCTGAATGTTTATCAAGCTGATATATCAAGAGTAATAACTGTTAGATTGCCAACAGTTGATAGTGTTTCAGCATATCTTGAGAGTGTTCAAGAGGAAGTGGCAGCAGTTCTTATTGCAAAGAGGACTCTCTTGAGAGCCAAAAACAGTTCTGATGCAATTGATATGCAATCAACAATAGATGAAAGAATTAAAGACATTGCTTTAAAATATGGTTCTCAAGTACCAAAATCAAAGCAATATCGTTTCCCAAAGGAGATGTCTTTATTACCAGAGCACCTGTTTCATCTTAGAAGGGGCCCACTTTTGGGAAACATTGTTGGCCATGAAGATGAGAGGTCTGTGTTACGGAACTTGTTTCTGAATGCATCCTTTGATCTGTCTCTGCGAATGGTTGCGCCTCGTTGTCTAATGCATCGGGAAGGGGGAACTTTCGAGGAACTACCAGCTTATGACCTTGCTATGCAGTCTGATGCAGCAGTTGTACTTGATCATGGCACAGATGTCTTCATTTGGTTGGTATGTCCTTTAGCTCCTATTATTGTCATTTGTTTTATACATCTTGATTCTGTCTCTCTACGTTTTGGTGTGCTTTTTCTTTTTGTCCTGGGGAACCTTGCTCCTTGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Gelsolin Sec23_BS Sec23_helical Sec23_trunk zf-Sec23_Sec24

Protein Analysis

811

Amino Acids

87.81

Weight (kDa)

6.03

Isoelectric Point (pI)

57.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-Sec23_Sec24 PF04810 204 - 242 1.7e-10 Sec23/Sec24 zinc finger
Sec23_trunk PF04811 286 - 512 5.8e-13 Sec23/Sec24 trunk domain
Sec23_BS PF08033 528 - 621 5.7e-13 Sec23/Sec24 beta-sandwich domain
Sec23_helical PF04815 635 - 731 2.1e-15 Sec23/Sec24 helical domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1188
AccB7I CCANNNNNTGG 1 cut(s) 1639
AccI GTMKAC 1 cut(s) 1665
AciI CCGC 3 cut(s) 17, 309, 369
AclI AACGTT 1 cut(s) 1679
AclWI GGATC 3 cut(s) 418, 602, 1336
AcoI YGGCCR 2 cut(s) 366, 2128
AcsI RAATTY 1 cut(s) 576
AfaI GTAC 5 cut(s) 268, 963, 1315, 2031, 2292
AflIII ACRYGT 1 cut(s) 1660
AgeI ACCGGT 2 cut(s) 1082, 1185
AhdI GACNNNNNGTC 1 cut(s) 284
AjnI CCWGG 9 cut(s) 565, 583, 811, 1030, 1050, 1324, 1571, 1645, 2412
AjuI GAANNNNNNNTTGG 2 cut(s) 1093, 1125
Alw21I GWGCWC 2 cut(s) 911, 2085
Alw26I GTCTC 4 cut(s) 1101, 1176, 2193, 2383
AlwI GGATC 3 cut(s) 418, 602, 1336
AlwNI CAGNNNCTG 3 cut(s) 464, 830, 1810
Ama87I CYCGRG 1 cut(s) 1251
AoxI GGCC 6 cut(s) 209, 366, 1148, 1231, 2104, 2128
ApaI GGGCCC 1 cut(s) 2108
ApeKI GCWGC 7 cut(s) 246, 311, 618, 1483, 1577, 1910, 2282
ApoI RAATTY 1 cut(s) 576
ArsI GACNNNNNNTTYG 4 cut(s) 197, 229, 2051, 2083
AsiGI ACCGGT 2 cut(s) 1082, 1185
AspLEI GCGC 1 cut(s) 2206
AsuC2I CCSGG 2 cut(s) 132, 276
AsuHPI GGTGA 8 cut(s) 69, 207, 324, 482, 1035, 1343, 1547, 1661
AsuII TTCGAA 1 cut(s) 404
AvaI CYCGRG 1 cut(s) 1251
AvaII GGWCC 6 cut(s) 278, 424, 587, 1307, 1322, 1643
BaeGI GKGCMC 1 cut(s) 2108
BalI TGGCCA 1 cut(s) 2130
BanI GGYRCC 1 cut(s) 1188
BanII GRGCYC 3 cut(s) 671, 911, 2108
BbsI GAAGAC 2 cut(s) 378, 2305
Bbv12I GWGCWC 2 cut(s) 911, 2085
BbvCI CCTCAGC 1 cut(s) 345
BbvI GCAGC 7 cut(s) 258, 298, 605, 1495, 1589, 1922, 2294
BccI CCATC 3 cut(s) 82, 1243, 1387
BceAI ACGGC 2 cut(s) 196, 1135
BciT130I CCWGG 9 cut(s) 567, 585, 813, 1032, 1052, 1326, 1573, 1647, 2414
BciVI GTATCC 1 cut(s) 26
BclI TGATCA 1 cut(s) 2296
BcnI CCSGG 2 cut(s) 132, 276
BcoDI GTCTC 4 cut(s) 1101, 1176, 2193, 2383
BfaI CTAG 5 cut(s) 170, 222, 735, 837, 1179
BfmI CTRYAG 1 cut(s) 1119
BfuI GTATCC 1 cut(s) 26
BglII AGATCT 1 cut(s) 745
BisI GCNGC 8 cut(s) 247, 312, 369, 619, 1484, 1578, 1911, 2283
BlsI GCNGC 8 cut(s) 248, 313, 370, 620, 1485, 1579, 1912, 2284
BmcAI AGTACT 3 cut(s) 268, 963, 1315
Bme18I GGWCC 6 cut(s) 278, 424, 587, 1307, 1322, 1643
BmeRI GACNNNNNGTC 1 cut(s) 284
BmeT110I CYCGRG 1 cut(s) 1251
BmiI GGNNCC 8 cut(s) 1081, 1190, 1309, 1473, 1644, 2105, 2106, 2420
BmrI ACTGGG 1 cut(s) 1305
BmsI GCATC 9 cut(s) 380, 445, 1022, 1408, 1574, 1951, 2183, 2230, 2269
BmuI ACTGGG 1 cut(s) 1305
BpiI GAAGAC 2 cut(s) 378, 2305
BpmI CTGGAG 1 cut(s) 567
Bpu10I CCTNAGC 2 cut(s) 345, 670
Bpu14I TTCGAA 1 cut(s) 404
BpuEI CTTGAG 3 cut(s) 1907, 1960, 2010
BpuMI CCSGG 2 cut(s) 132, 276
BsaBI GATNNNNATC 1 cut(s) 612
BsaI GGTCTC 1 cut(s) 1176
BsaWI WCCGGW 2 cut(s) 1082, 1185
Bse118I RCCGGY 5 cut(s) 217, 242, 349, 1082, 1185
Bse1I ACTGG 3 cut(s) 824, 1311, 1792
Bse3DI GCAATG 2 cut(s) 1463, 2004
Bse8I GATNNNNATC 1 cut(s) 612
BseBI CCWGG 9 cut(s) 567, 585, 813, 1032, 1052, 1326, 1573, 1647, 2414
BseGI GGATG 4 cut(s) 371, 1398, 1565, 2174
BseJI GATNNNNATC 1 cut(s) 612
BseMI GCAATG 2 cut(s) 1463, 2004
BseMII CTCAG 6 cut(s) 204, 359, 507, 684, 1767, 1817
BseNI ACTGG 3 cut(s) 824, 1311, 1792
BseRI GAGGAG 5 cut(s) 96, 99, 102, 141, 333
BseSI GKGCMC 1 cut(s) 2108
BseX3I CGGCCG 1 cut(s) 366
BseXI GCAGC 7 cut(s) 258, 298, 605, 1495, 1589, 1922, 2294
BseYI CCCAGC 2 cut(s) 664, 1451
BsgI GTGCAG 1 cut(s) 831
Bsh1285I CGRYCG 1 cut(s) 369
BshFI GGCC 6 cut(s) 211, 368, 1150, 1233, 2106, 2130
BshNI GGYRCC 1 cut(s) 1188
BshTI ACCGGT 2 cut(s) 1082, 1185
BsiEI CGRYCG 1 cut(s) 369
BsiHKAI GWGCWC 2 cut(s) 911, 2085
BsiHKCI CYCGRG 1 cut(s) 1251
BsiSI CCGG 8 cut(s) 132, 218, 243, 276, 350, 365, 1083, 1186
BslFI GGGAC 4 cut(s) 39, 291, 518, 1778
BsmAI GTCTC 4 cut(s) 1101, 1176, 2193, 2383
BsmFI GGGAC 4 cut(s) 39, 291, 518, 1778
BsmI GAATGC 1 cut(s) 2176
BsnI GGCC 6 cut(s) 211, 368, 1150, 1233, 2106, 2130
Bso31I GGTCTC 1 cut(s) 1176
BsoBI CYCGRG 1 cut(s) 1251
Bsp119I TTCGAA 1 cut(s) 404
Bsp120I GGGCCC 1 cut(s) 2104
Bsp1286I GDGCHC 4 cut(s) 671, 911, 2085, 2108
Bsp143I GATC 8 cut(s) 39, 172, 410, 607, 745, 1328, 2182, 2296
Bsp19I CCATGG 1 cut(s) 777
BspACI CCGC 3 cut(s) 17, 309, 369
BspANI GGCC 6 cut(s) 211, 368, 1150, 1233, 2106, 2130
BspCNI CTCAG 6 cut(s) 203, 358, 506, 683, 1768, 1816
BspHI TCATGA 1 cut(s) 1672
BspLI GGNNCC 8 cut(s) 1081, 1190, 1309, 1473, 1644, 2105, 2106, 2420
BspPI GGATC 3 cut(s) 418, 602, 1336
BspT104I TTCGAA 1 cut(s) 404
BspT107I GGYRCC 1 cut(s) 1188
BspTNI GGTCTC 1 cut(s) 1176
BsrDI GCAATG 2 cut(s) 1463, 2004
BsrFI RCCGGY 5 cut(s) 217, 242, 349, 1082, 1185
BsrI ACTGG 3 cut(s) 824, 1311, 1792
BssAI RCCGGY 5 cut(s) 217, 242, 349, 1082, 1185
BssMI GATC 8 cut(s) 39, 172, 410, 607, 745, 1328, 2182, 2296
BssT1I CCWWGG 4 cut(s) 28, 777, 1192, 1749
Bst2UI CCWGG 9 cut(s) 567, 585, 813, 1032, 1052, 1326, 1573, 1647, 2414
Bst4CI ACNGT 9 cut(s) 63, 435, 480, 966, 979, 1432, 1849, 1864, 1955
Bst6I CTCTTC 1 cut(s) 1647
BstBI TTCGAA 1 cut(s) 404
BstC8I GCNNGC 2 cut(s) 1107, 1582
BstDEI CTNAG 7 cut(s) 190, 345, 493, 670, 1776, 1803, 2096
BstDSI CCRYGG 2 cut(s) 777, 1588
BstF5I GGATG 4 cut(s) 371, 1398, 1565, 2174
BstHHI GCGC 1 cut(s) 2206
BstKTI GATC 8 cut(s) 42, 175, 413, 610, 748, 1331, 2185, 2299
BstMAI GTCTC 4 cut(s) 1101, 1176, 2193, 2383
BstMBI GATC 8 cut(s) 39, 172, 410, 607, 745, 1328, 2182, 2296
BstMCI CGRYCG 1 cut(s) 369
BstMWI GCNNNNNNNGC 1 cut(s) 95
BstNI CCWGG 9 cut(s) 567, 585, 813, 1032, 1052, 1326, 1573, 1647, 2414
BstNSI RCATGY 4 cut(s) 920, 1109, 1130, 1664
BstSFI CTRYAG 1 cut(s) 1119
BstSLI GKGCMC 1 cut(s) 2108
BstV1I GCAGC 7 cut(s) 258, 298, 605, 1495, 1589, 1922, 2294
BstV2I GAAGAC 2 cut(s) 378, 2305
BstX2I RGATCY 2 cut(s) 745, 1328
BstXI CCANNNNNNTGG 2 cut(s) 629, 894
BstYI RGATCY 2 cut(s) 745, 1328
BstZI CGGCCG 1 cut(s) 366
BsuI GTATCC 1 cut(s) 26
BsuRI GGCC 6 cut(s) 211, 368, 1150, 1233, 2106, 2130
BtgI CCRYGG 2 cut(s) 777, 1588
BtgZI GCGATG 1 cut(s) 599
BtsCI GGATG 4 cut(s) 371, 1398, 1565, 2174
BtsI GCAGTG 2 cut(s) 689, 1112
BtsIMutI CAGTG 3 cut(s) 683, 689, 1112
Cac8I GCNNGC 2 cut(s) 1107, 1582
CaiI CAGNNNCTG 3 cut(s) 464, 830, 1810
CciI TCATGA 1 cut(s) 1672
CfoI GCGC 1 cut(s) 2206
Cfr10I RCCGGY 5 cut(s) 217, 242, 349, 1082, 1185
CsiI ACCWGGT 1 cut(s) 811
Csp6I GTAC 5 cut(s) 267, 962, 1314, 2030, 2291
CspAI ACCGGT 2 cut(s) 1082, 1185
CviQI GTAC 5 cut(s) 267, 962, 1314, 2030, 2291
DdeI CTNAG 7 cut(s) 190, 345, 493, 670, 1776, 1803, 2096
DpnI GATC 8 cut(s) 41, 174, 412, 609, 747, 1330, 2184, 2298
DpnII GATC 8 cut(s) 39, 172, 410, 607, 745, 1328, 2182, 2296
DraI TTTAAA 1 cut(s) 2013
DriI GACNNNNNGTC 1 cut(s) 284
EaeI YGGCCR 2 cut(s) 366, 2128
EagI CGGCCG 1 cut(s) 366
Eam1104I CTCTTC 1 cut(s) 1647
Eam1105I GACNNNNNGTC 1 cut(s) 284
EarI CTCTTC 1 cut(s) 1647
Ecl136II GAGCTC 1 cut(s) 909
EclXI CGGCCG 1 cut(s) 366
Eco130I CCWWGG 4 cut(s) 28, 777, 1192, 1749
Eco24I GRGCYC 3 cut(s) 671, 911, 2108
Eco31I GGTCTC 1 cut(s) 1176
Eco47I GGWCC 6 cut(s) 278, 424, 587, 1307, 1322, 1643
Eco52I CGGCCG 1 cut(s) 366
Eco53kI GAGCTC 1 cut(s) 909
Eco88I CYCGRG 1 cut(s) 1251
EcoICRI GAGCTC 1 cut(s) 909
EcoO109I RGGNCCY 3 cut(s) 587, 1643, 2104
EcoRII CCWGG 9 cut(s) 565, 583, 811, 1030, 1050, 1324, 1571, 1645, 2412
EcoT14I CCWWGG 4 cut(s) 28, 777, 1192, 1749
EcoT22I ATGCAT 3 cut(s) 1107, 2176, 2223
EcoT38I GRGCYC 3 cut(s) 671, 911, 2108
ErhI CCWWGG 4 cut(s) 28, 777, 1192, 1749
FaqI GGGAC 4 cut(s) 39, 291, 518, 1778
FauI CCCGC 1 cut(s) 316
FbaI TGATCA 1 cut(s) 2296
FblI GTMKAC 1 cut(s) 1665
Fnu4HI GCNGC 8 cut(s) 247, 312, 369, 619, 1484, 1578, 1911, 2283
FokI GGATG 4 cut(s) 358, 1405, 1552, 2161
FriOI GRGCYC 3 cut(s) 671, 911, 2108
Fsp4HI GCNGC 8 cut(s) 247, 312, 369, 619, 1484, 1578, 1911, 2283
FspBI CTAG 5 cut(s) 170, 222, 735, 837, 1179
GlaI GCGC 1 cut(s) 2205
GluI GCNGC 8 cut(s) 247, 312, 369, 619, 1484, 1578, 1911, 2283
GsaI CCCAGC 2 cut(s) 668, 1455
GsuI CTGGAG 1 cut(s) 567
HaeIII GGCC 6 cut(s) 211, 368, 1150, 1233, 2106, 2130
HapII CCGG 8 cut(s) 132, 218, 243, 276, 350, 365, 1083, 1186
HhaI GCGC 1 cut(s) 2206
Hin6I GCGC 1 cut(s) 2204
HinP1I GCGC 1 cut(s) 2204
HindIII AAGCTT 2 cut(s) 1173, 1497
HinfI GANTC 9 cut(s) 7, 144, 833, 929, 1004, 1055, 1287, 1933, 2372
HpaII CCGG 8 cut(s) 132, 218, 243, 276, 350, 365, 1083, 1186
HphI GGTGA 8 cut(s) 69, 207, 324, 482, 1035, 1343, 1547, 1661
Hpy166II GTNNAC 5 cut(s) 473, 1307, 1552, 1666, 1797
Hpy188I TCNGA 8 cut(s) 67, 832, 1000, 1615, 1812, 1960, 2169, 2278
Hpy8I GTNNAC 5 cut(s) 473, 1307, 1552, 1666, 1797
HpyAV CCTTC 6 cut(s) 33, 129, 192, 1057, 2094, 2222
HpyCH4III ACNGT 9 cut(s) 63, 435, 480, 966, 979, 1432, 1849, 1864, 1955
HpyCH4IV ACGT 4 cut(s) 383, 604, 1679, 2386
HpyF10VI GCNNNNNNNGC 1 cut(s) 95
HpyF3I CTNAG 7 cut(s) 190, 345, 493, 670, 1776, 1803, 2096
HpySE526I ACGT 4 cut(s) 383, 604, 1679, 2386
HspAI GCGC 1 cut(s) 2204
Ksp22I TGATCA 1 cut(s) 2296
Kzo9I GATC 8 cut(s) 39, 172, 410, 607, 745, 1328, 2182, 2296
LmnI GCTCC 6 cut(s) 632, 736, 914, 1396, 2344, 2431
Lsp1109I GCAGC 7 cut(s) 258, 298, 605, 1495, 1589, 1922, 2294
LweI GCATC 9 cut(s) 380, 445, 1022, 1408, 1574, 1951, 2183, 2230, 2269
MabI ACCWGGT 1 cut(s) 811
MaeI CTAG 5 cut(s) 170, 222, 735, 837, 1179
MaeII ACGT 4 cut(s) 383, 604, 1679, 2386
MaeIII GTNAC 5 cut(s) 213, 337, 442, 1349, 2151
MalI GATC 8 cut(s) 41, 174, 412, 609, 747, 1330, 2184, 2298
MboI GATC 8 cut(s) 39, 172, 410, 607, 745, 1328, 2182, 2296
MboII GAAGA 7 cut(s) 378, 529, 755, 1664, 1736, 2147, 2305
MfeI CAATTG 1 cut(s) 1965
MflI RGATCY 2 cut(s) 745, 1328
MhlI GDGCHC 4 cut(s) 671, 911, 2085, 2108
MlsI TGGCCA 1 cut(s) 2130
MluNI TGGCCA 1 cut(s) 2130
MlyI GAGTC 3 cut(s) 1064, 1296, 1927
Mox20I TGGCCA 1 cut(s) 2130
Mph1103I ATGCAT 3 cut(s) 1107, 2176, 2223
MscI TGGCCA 1 cut(s) 2130
MseI TTAA 4 cut(s) 1145, 1998, 2012, 2434
MslI CAYNNNNRTG 4 cut(s) 627, 1387, 1709, 2136
Msp20I TGGCCA 1 cut(s) 2130
MspA1I CMGCKG 1 cut(s) 311
MspI CCGG 8 cut(s) 132, 218, 243, 276, 350, 365, 1083, 1186
MunI CAATTG 1 cut(s) 1965
Mva1269I GAATGC 1 cut(s) 2176
MvaI CCWGG 9 cut(s) 567, 585, 813, 1032, 1052, 1326, 1573, 1647, 2414
MwoI GCNNNNNNNGC 1 cut(s) 95
NciI CCSGG 2 cut(s) 132, 276
NcoI CCATGG 1 cut(s) 777
NdeII GATC 8 cut(s) 39, 172, 410, 607, 745, 1328, 2182, 2296
NlaIV GGNNCC 8 cut(s) 1081, 1190, 1309, 1473, 1644, 2105, 2106, 2420
NmeAIII GCCGAG 1 cut(s) 722
NmuCI GTSAC 3 cut(s) 213, 442, 1349
NsiI ATGCAT 3 cut(s) 1107, 2176, 2223
NspI RCATGY 4 cut(s) 920, 1109, 1130, 1664
NspV TTCGAA 1 cut(s) 404
PaeI GCATGC 1 cut(s) 1109
PaeR7I CTCGAG 1 cut(s) 1251
PagI TCATGA 1 cut(s) 1672
PasI CCCWGGG 1 cut(s) 566
PciI ACATGT 1 cut(s) 1660
PctI GAATGC 1 cut(s) 2176
PfeI GAWTC 6 cut(s) 7, 144, 833, 929, 1004, 2372
PflMI CCANNNNNTGG 1 cut(s) 1639
PfoI TCCNGGA 1 cut(s) 1324
PinAI ACCGGT 2 cut(s) 1082, 1185
PkrI GCNGC 8 cut(s) 248, 313, 370, 620, 1485, 1579, 1912, 2284
PleI GAGTC 3 cut(s) 1063, 1295, 1927
PpsI GAGTC 3 cut(s) 1063, 1295, 1927
PpuMI RGGWCCY 2 cut(s) 587, 1643
PscI ACATGT 1 cut(s) 1660
Psp124BI GAGCTC 1 cut(s) 911
Psp1406I AACGTT 1 cut(s) 1679
Psp5II RGGWCCY 2 cut(s) 587, 1643
Psp6I CCWGG 9 cut(s) 565, 583, 811, 1030, 1050, 1324, 1571, 1645, 2412
PspFI CCCAGC 2 cut(s) 664, 1451
PspGI CCWGG 9 cut(s) 565, 583, 811, 1030, 1050, 1324, 1571, 1645, 2412
PspN4I GGNNCC 8 cut(s) 1081, 1190, 1309, 1473, 1644, 2105, 2106, 2420
PspOMI GGGCCC 1 cut(s) 2104
PspPPI RGGWCCY 2 cut(s) 587, 1643
PstNI CAGNNNCTG 3 cut(s) 464, 830, 1810
PsuI RGATCY 2 cut(s) 745, 1328
RsaI GTAC 5 cut(s) 268, 963, 1315, 2031, 2292
RsaNI GTAC 5 cut(s) 267, 962, 1314, 2030, 2291
RseI CAYNNNNRTG 4 cut(s) 627, 1387, 1709, 2136
SacI GAGCTC 1 cut(s) 911
SaqAI TTAA 4 cut(s) 1145, 1998, 2012, 2434
SatI GCNGC 8 cut(s) 247, 312, 369, 619, 1484, 1578, 1911, 2283
Sau3AI GATC 8 cut(s) 39, 172, 410, 607, 745, 1328, 2182, 2296
ScaI AGTACT 3 cut(s) 268, 963, 1315
SchI GAGTC 3 cut(s) 1064, 1296, 1927
SduI GDGCHC 4 cut(s) 671, 911, 2085, 2108
SexAI ACCWGGT 1 cut(s) 811
SfaNI GCATC 9 cut(s) 380, 445, 1022, 1408, 1574, 1951, 2183, 2230, 2269
SfcI CTRYAG 1 cut(s) 1119
Sfr274I CTCGAG 1 cut(s) 1251
SfuI TTCGAA 1 cut(s) 404
SinI GGWCC 6 cut(s) 278, 424, 587, 1307, 1322, 1643
SlaI CTCGAG 1 cut(s) 1251
SmiMI CAYNNNNRTG 4 cut(s) 627, 1387, 1709, 2136
SmlI CTYRAG 4 cut(s) 1251, 1886, 1939, 2025
SmoI CTYRAG 4 cut(s) 1251, 1886, 1939, 2025
SphI GCATGC 1 cut(s) 1109
SsiI CCGC 3 cut(s) 17, 309, 369
SspMI CTAG 5 cut(s) 170, 222, 735, 837, 1179
SstI GAGCTC 1 cut(s) 911
StyI CCWWGG 4 cut(s) 28, 777, 1192, 1749
TaaI ACNGT 9 cut(s) 63, 435, 480, 966, 979, 1432, 1849, 1864, 1955
TaiI ACGT 4 cut(s) 386, 607, 1682, 2389
TaqI TCGA 7 cut(s) 5, 38, 404, 927, 1252, 1722, 2241
TatI WGTACW 4 cut(s) 266, 961, 1313, 2290
TauI GCSGC 1 cut(s) 371
TfiI GAWTC 6 cut(s) 7, 144, 833, 929, 1004, 2372
Tru1I TTAA 4 cut(s) 1145, 1998, 2012, 2434
Tru9I TTAA 4 cut(s) 1145, 1998, 2012, 2434
TscAI CASTG 3 cut(s) 683, 689, 1119
TseFI GTSAC 3 cut(s) 213, 442, 1349
TseI GCWGC 7 cut(s) 246, 311, 618, 1483, 1577, 1910, 2282
Tsp45I GTSAC 3 cut(s) 213, 442, 1349
TspDTI ATGAA 6 cut(s) 897, 1689, 2004, 2081, 2148, 2305
TspGWI ACGGA 3 cut(s) 293, 1577, 2170
TspRI CASTG 3 cut(s) 683, 689, 1119
Van91I CCANNNNNTGG 1 cut(s) 1639
VpaK11BI GGWCC 6 cut(s) 278, 424, 587, 1307, 1322, 1643
XapI RAATTY 1 cut(s) 576
XbaI TCTAGA 2 cut(s) 836, 1178
XceI RCATGY 4 cut(s) 920, 1109, 1130, 1664
XcmI CCANNNNNNNNNTGG 1 cut(s) 1529
XhoI CTCGAG 1 cut(s) 1251
XmiI GTMKAC 1 cut(s) 1665
XspI CTAG 5 cut(s) 170, 222, 735, 837, 1179
ZrmI AGTACT 3 cut(s) 268, 963, 1315
Zsp2I ATGCAT 3 cut(s) 1107, 2176, 2223
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.