Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009604

Physical Location & Seq

Genomic Coordinates Reverse (-)

1123475 .. 1128490

Gene Structure 5016 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G02560.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2862 bp

ATGGACGCGTTCAAGGAGGAGATAGAAATCGGGAGCTCGGTGGAGTCTTTAATGGAGCTATTGGATTCGCAGAAGGTGCTTTTTCATAGCCAGATCGATCAGCTCCAAGATGTCGTCGTTGCGCAATGCAAACTTACCGGCGTTAATCCCCTTGCGCAAGAAATGGCTGCTGGTGCTTTGTCCATTAAAATTGGAAAGCGGCCAAGAGACTTGTTGAATCCTAAGGCTGTTAAGTATCTACAAGCAGTTTTCGCAATTAAAGATGCTATTAGTAAGAGGGAATCTCGGGAGATAAGTGCTTTATTTGGCATCACAGTCGCCCAGGTTCGAGAATTTTTTGTTACTCAAAAGACAAGAGTGAGGAAACAGGTGAGGCTTTCAAGGGAGAAAGTAGTTATGTCCAATACGCATGCTTTACAAGATGATGGTGTTCCGGAAAATAACAATGCCACAAATCATGTTGAACCCGTTCCCTTGAACTCTATACATCCGGAGGCATGTTCTATAAGCTGGGGTGAAGGTGAAACAGTGGCACTTATTCCACCTGAAGATATTCCACCTGACATCAGCGATTCAGACAAATACTTTGTTGAGAATATATTTTCTCTGCTGCGTAAAGAGGAAACATTTTCAGGCCAGGTGAAACTAATGGAGTGGATCATGCAGATACAAGATGCTTCTGTGCTGATCTGGTTTTTATCAAAAGGAGGGGTTTTGATACTTACAACATGGTTAAGTCAAGCTGCTAGTGAAGAGCAAACAAGTGTCTTACTTCTTATCCTGAAGGTTCTTTGTCATTTACCTCTCCACAAAGCATCTCCTGAAAATATGTCTGCCATATTACAAAGCGTTAATGGACTTCGTTTCTATAGGATATCAGACATATCAAACAGGGCAAAAGGTTTGTTATCAAGGTGGACCAAGTTATTTGCGAAAATCCAAGCTATGAAGAAACAAAATCGTAACAGTTCGCAAATTGATTCGCAGAGTCAATTGCTTCTGAAACAGAGTATTGCTGAAATCATGGGTGATAGTAGCAATCCTGAAGATATTCTTAGTCTCTCAAATGGAAAGTCAGAGAATGTCAGGAGGATTGAATCGTCACAGGGTCCAAAACTGTTGCTTACTTCTGCAGATGATTCCACCAAGAAACACATGCTTGGTTCAAATCCATCGTATAACAAAGAACGCAGGAAAGTACAGATGGTGGAACAACCAGGCCAAAAAGCTGCTGGAAAGAGTCCGCAGACAGTAAGAATAGGAACTTCAGGTCGAAGCCGCCCAATGTCTGCTGATGATATTCAGAAAGCAAAGATGCGTGCCCTTTATATGCAGAGCAAGAACAGTAAAAAGGATCCTTTACCAAGTGCCATTGGTGATTCGAAAATCGTTGCTCCTGAGAAGCCCTTGGCTCTTCATTCAGCCAAGGATTCTCCACCTATTCAGAACAATGAAGCTAAGACTGAAGACACACCTGTACTCTCGACTGTTCAGCCCGTCAATGGATTTTCAACTATTCAGCCCGTCAATGGACCTTCAGCTGTTCAGCCCGTCAATGGACCTTTGGCTGTTCAGCCTGTCAATGGACCTTCGGCTCTTCAGCCCGTCAATGGACCTTCGGCCGTAATTGTCCCGGTACAAGCTGATGAAATTAAAAAACCTTCAACACCTCCTAAAAGCATTTCTAGTAAGGTGGGAGTTATGATGAAAATGAGTTCACAAACTATTCTCAAGAATTGCAAGAGAAAACAGATTGATTGGCATGTACCACCAGGAATGGAACTTGACGAACTCTGGAGAGTAGCCGCTGGTGGTAATAGCAAGGAGGCTGATGTTCAGAGAAACAGAAACCGGCGAGAAAGAGAAACAACATATCAGTCTCTTCAAACTATACCGTTGAACCCTAAAGAACCATGGGATAGGGAAATGGACTATGATGACAGTTTGACCCCTGAAATTCCATCTCAACAGCCACCAGAAGAAAGTTTAACGGAACCACAGGATTCACTTGATGAACGAAGAATTGCTGCTGGTGCTGCCACAACCTCTTCATCTCTAAGCAGTCCTGAACCTGATCTCGAGTTATTAGCTGCGTTACTTAAGAACCCAGATCTTGTTTATGCACTAACTTCGGGAAAACCCAGTAATTTAGCCGGCCAAGATATGGTAAAACTGCTTGATGTGATTAAGACTGGTGCACCAAACTCAAGCAGTAGCTCAAATAAACAGGTTGAAGAAAGGGTCGAAGTTTCCCTTCCATCTCCCACTCCATCAACTAATCCTGGAATGAGTGGATGGGGACAAGAAGGGATTCGGAATCCATTTTCAAGGCAAAACCAAGTTGGTACTGCAGTTGCTAGATCGGGTACACAGCTTCGTGTTGGTTCAATGCAATGGCATCAAACAAATGAACAATCAATCCCACGACATGCTCCATCAGCATACAGTAACTCGATCACATTGGCTCACACAGAAAGAGAACAGCAACAATATATGCAACCAAAACTTCATCACAATTTACATTTTCAACAACAACAACAACAACCAATCTCAACAACCTCGTATGCAGTTAGGGAACCAGTAGGACAAATGGGAACAGGTACATCGAGTTCATGGAGGAGTCAGCAGAGTCAGAACAGTTACTACTCACATCAAGAAAACGAGATTGCATCGGCTTCACAAGTTACTTCATACCAAGGGAATAGCCAGTACATGAGTAGCAATCCAGGATATGAATCATGGAGTCCTGATAATAGCCCAAGTAGGAACCAGCTTAACATGAGGGGACAACAACAACAAGCATCAAGGAAACATGATTCTTCTACTCATCCATATTGGAACCAAAACAAAAGATGGCGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009791 GO:0009889 GO:0010228 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox

Protein Analysis

953

Amino Acids

105.41

Weight (kDa)

8.8

Isoelectric Point (pI)

61.25

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009604)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02560 AT4G02560
fragaria_vesca	FvH4_2g25100 FvH4_2g25100 FvH4_2g25100
malus_domestica	MD03G1284300.v1.1 MD11G1302000.v1.1
prunus_persica	Prupe.8G255600_v2.0.a1 Prupe.8G255600_v2.0.a1
pyrus_communis	pycom03g22510 pycom11g26460
rosa_chinensis	RchiOBHm_Chr6g0293161
rosa_laevigata	RLG00000011970
rosa_multiflora	Rmu_sc0014786.1_g000002
rosa_roxburghii	Rroxscaffold_7G00174400
rosa_rugosa	Rorug06G0233000 Rorug06G0233100
rosa_samantha	Rh6AG345700 Rh6BG353500 Rh6CG359900 Rh6DG346300
rosa_wichuraiana	Rw6G030130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	123, 156
AccB7I	CCANNNNNTGG	1 cut(s)	2164
AccII	CGCG	1 cut(s)	8
AccIII	TCCGGA	2 cut(s)	433, 490
AciI	CCGC	4 cut(s)	199, 1244, 1279, 1806
AclWI	GGATC	3 cut(s)	665, 1349, 1362
AcoI	YGGCCR	3 cut(s)	200, 1620, 2155
AcsI	RAATTY	2 cut(s)	332, 1956
AcuI	CTGAAG	7 cut(s)	567, 803, 1065, 1251, 1485, 1521, 1583
AfaI	GTAC	8 cut(s)	1200, 1479, 1638, 1767, 2347, 2368, 2602, 2711
AfiI	CCNNNNNNNGG	6 cut(s)	1502, 1529, 1556, 1583, 1610, 2164
AflII	CTTAAG	1 cut(s)	2099
AflIII	ACRYGT	1 cut(s)	6
AjnI	CCWGG	6 cut(s)	321, 636, 1216, 1771, 2281, 2725
AloI	GAACNNNNNNTCC	2 cut(s)	2403, 2435
Alw21I	GWGCWC	2 cut(s)	38, 2200
Alw26I	GTCTC	3 cut(s)	201, 1064, 1884
Alw44I	GTGCAC	1 cut(s)	2196
AlwI	GGATC	3 cut(s)	665, 1349, 1362
Ama87I	CYCGRG	2 cut(s)	285, 2078
Aor13HI	TCCGGA	2 cut(s)	433, 490
AoxI	GGCC	5 cut(s)	200, 634, 1219, 1620, 2155
ApaLI	GTGCAC	1 cut(s)	2196
ApeKI	GCWGC	7 cut(s)	167, 610, 743, 1229, 2027, 2036, 2090
ApoI	RAATTY	2 cut(s)	332, 1956
ArsI	GACNNNNNNTTYG	4 cut(s)	569, 601, 1058, 1090
Asp700I	GAANNNNTTC	4 cut(s)	468, 552, 1050, 2310
AspLEI	GCGC	2 cut(s)	124, 157
AspS9I	GGNCC	6 cut(s)	918, 1109, 1532, 1559, 1586, 1613
AsuC2I	CCSGG	1 cut(s)	1634
AsuHPI	GGTGA	6 cut(s)	382, 527, 533, 652, 1040, 1388
AsuII	TTCGAA	1 cut(s)	1382
AvaI	CYCGRG	2 cut(s)	285, 2078
AvaII	GGWCC	6 cut(s)	918, 1109, 1532, 1559, 1586, 1613
AxyI	CCTNAGG	1 cut(s)	222
BaeGI	GKGCMC	2 cut(s)	1324, 2200
BaeI	ACNNNNGTAYC	2 cut(s)	2337, 2370
BamHI	GGATCC	1 cut(s)	1354
BanII	GRGCYC	1 cut(s)	38
BbsI	GAAGAC	1 cut(s)	1473
Bbv12I	GWGCWC	2 cut(s)	38, 2200
BbvI	GCAGC	7 cut(s)	154, 597, 730, 1216, 2014, 2023, 2077
BccI	CCATC	9 cut(s)	419, 1180, 1198, 1969, 2266, 2278, 2289, 2443, 2847
BceAI	ACGGC	1 cut(s)	1607
BcgI	CGANNNNNNTGC	4 cut(s)	298, 332, 2112, 2146
BciT130I	CCWGG	6 cut(s)	323, 638, 1218, 1773, 2283, 2727
BcnI	CCSGG	1 cut(s)	1634
BcoDI	GTCTC	3 cut(s)	201, 1064, 1884
BfaI	CTAG	3 cut(s)	747, 1686, 2358
BfmI	CTRYAG	3 cut(s)	868, 1131, 2349
BfrI	CTTAAG	1 cut(s)	2099
BglII	AGATCT	1 cut(s)	2110
Bme1390I	CCNGG	7 cut(s)	323, 638, 1218, 1634, 1773, 2283, 2727
Bme18I	GGWCC	6 cut(s)	918, 1109, 1532, 1559, 1586, 1613
BmeT110I	CYCGRG	2 cut(s)	285, 2078
BmgT120I	GGNCC	6 cut(s)	918, 1109, 1532, 1559, 1586, 1613
BmiI	GGNNCC	6 cut(s)	1110, 1356, 1995, 2577, 2768, 2840
BmrFI	CCNGG	7 cut(s)	323, 638, 1218, 1634, 1773, 2283, 2727
BmrI	ACTGGG	1 cut(s)	2136
BmsI	GCATC	8 cut(s)	253, 318, 664, 824, 1305, 2407, 2678, 2810
BmuI	ACTGGG	1 cut(s)	2136
BpiI	GAAGAC	1 cut(s)	1473
BplI	GAGNNNNNCTC	2 cut(s)	268, 300
BpmI	CTGGAG	1 cut(s)	1816
Bpu14I	TTCGAA	1 cut(s)	1382
BpuEI	CTTGAG	2 cut(s)	1715, 2191
BpuMI	CCSGG	1 cut(s)	1634
Bsa29I	ATCGAT	1 cut(s)	96
BsaBI	GATNNNNATC	2 cut(s)	26, 2734
BsaJI	CCNNGG	5 cut(s)	321, 1407, 1425, 1913, 2695
BsaWI	WCCGGW	2 cut(s)	433, 490
Bsc4I	CCNNNNNNNGG	6 cut(s)	1502, 1529, 1556, 1583, 1610, 2164
Bse118I	RCCGGY	3 cut(s)	137, 1851, 2153
Bse1I	ACTGG	4 cut(s)	2142, 2197, 2579, 2707
Bse21I	CCTNAGG	1 cut(s)	222
Bse3DI	GCAATG	2 cut(s)	131, 2399
Bse8I	GATNNNNATC	2 cut(s)	26, 2734
BseAI	TCCGGA	2 cut(s)	433, 490
BseBI	CCWGG	6 cut(s)	323, 638, 1218, 1773, 2283, 2727
BseCI	ATCGAT	1 cut(s)	96
BseDI	CCNNGG	5 cut(s)	321, 1407, 1425, 1913, 2695
BseGI	GGATG	3 cut(s)	487, 2300, 2827
BseJI	GATNNNNATC	2 cut(s)	26, 2734
BseLI	CCNNNNNNNGG	6 cut(s)	1502, 1529, 1556, 1583, 1610, 2164
BseMI	GCAATG	2 cut(s)	131, 2399
BseMII	CTCAG	1 cut(s)	1389
BseNI	ACTGG	4 cut(s)	2142, 2197, 2579, 2707
BseRI	GAGGAG	2 cut(s)	32, 2632
BseSI	GKGCMC	2 cut(s)	1324, 2200
BseX3I	CGGCCG	1 cut(s)	1620
BseXI	GCAGC	7 cut(s)	154, 597, 730, 1216, 2014, 2023, 2077
BseYI	CCCAGC	1 cut(s)	510
Bsh1236I	CGCG	1 cut(s)	8
Bsh1285I	CGRYCG	1 cut(s)	1623
BshFI	GGCC	5 cut(s)	202, 636, 1221, 1622, 2157
BshVI	ATCGAT	1 cut(s)	96
BsiEI	CGRYCG	1 cut(s)	1623
BsiHKAI	GWGCWC	2 cut(s)	38, 2200
BsiHKCI	CYCGRG	2 cut(s)	285, 2078
BsiSI	CCGG	6 cut(s)	138, 434, 491, 1634, 1852, 2154
BslFI	GGGAC	3 cut(s)	1616, 2313, 2799
BslI	CCNNNNNNNGG	6 cut(s)	1502, 1529, 1556, 1583, 1610, 2164
BsmAI	GTCTC	3 cut(s)	201, 1064, 1884
BsmFI	GGGAC	3 cut(s)	1616, 2313, 2799
BsnI	GGCC	5 cut(s)	202, 636, 1221, 1622, 2157
BsoBI	CYCGRG	2 cut(s)	285, 2078
Bsp119I	TTCGAA	1 cut(s)	1382
Bsp1286I	GDGCHC	3 cut(s)	38, 1324, 2200
Bsp13I	TCCGGA	2 cut(s)	433, 490
Bsp143I	GATC	9 cut(s)	93, 97, 657, 687, 1354, 2074, 2110, 2360, 2454
Bsp19I	CCATGG	1 cut(s)	1913
BspACI	CCGC	4 cut(s)	199, 1244, 1279, 1806
BspANI	GGCC	5 cut(s)	202, 636, 1221, 1622, 2157
BspCNI	CTCAG	1 cut(s)	1390
BspDI	ATCGAT	1 cut(s)	96
BspEI	TCCGGA	2 cut(s)	433, 490
BspFNI	CGCG	1 cut(s)	8
BspLI	GGNNCC	6 cut(s)	1110, 1356, 1995, 2577, 2768, 2840
BspMAI	CTGCAG	2 cut(s)	1135, 2353
BspPI	GGATC	3 cut(s)	665, 1349, 1362
BspQI	GCTCTTC	3 cut(s)	747, 1419, 1602
BspT104I	TTCGAA	1 cut(s)	1382
BspTI	CTTAAG	1 cut(s)	2099
BsrDI	GCAATG	2 cut(s)	131, 2399
BsrFI	RCCGGY	3 cut(s)	137, 1851, 2153
BsrI	ACTGG	4 cut(s)	2142, 2197, 2579, 2707
BssAI	RCCGGY	3 cut(s)	137, 1851, 2153
BssECI	CCNNGG	5 cut(s)	321, 1407, 1425, 1913, 2695
BssMI	GATC	9 cut(s)	93, 97, 657, 687, 1354, 2074, 2110, 2360, 2454
BssT1I	CCWWGG	4 cut(s)	1407, 1425, 1913, 2695
Bst2UI	CCWGG	6 cut(s)	323, 638, 1218, 1773, 2283, 2727
Bst6I	CTCTTC	5 cut(s)	747, 1419, 1602, 1887, 2053
BstAFI	CTTAAG	1 cut(s)	2099
BstAPI	GCANNNNNTGC	1 cut(s)	76
BstBI	TTCGAA	1 cut(s)	1382
BstC8I	GCNNGC	3 cut(s)	411, 1320, 2155
BstDEI	CTNAG	5 cut(s)	222, 1055, 1398, 1458, 2057
BstDSI	CCRYGG	1 cut(s)	1913
BstF5I	GGATG	3 cut(s)	487, 2300, 2827
BstFNI	CGCG	1 cut(s)	8
BstHHI	GCGC	2 cut(s)	124, 157
BstKTI	GATC	9 cut(s)	96, 100, 660, 690, 1357, 2077, 2113, 2363, 2457
BstMAI	GTCTC	3 cut(s)	201, 1064, 1884
BstMBI	GATC	9 cut(s)	93, 97, 657, 687, 1354, 2074, 2110, 2360, 2454
BstMCI	CGRYCG	1 cut(s)	1623
BstMWI	GCNNNNNNNGC	6 cut(s)	76, 173, 251, 2033, 2036, 2438
BstNI	CCWGG	6 cut(s)	323, 638, 1218, 1773, 2283, 2727
BstNSI	RCATGY	5 cut(s)	413, 501, 1159, 1766, 2432
BstSCI	CCNGG	7 cut(s)	321, 636, 1216, 1632, 1771, 2281, 2725
BstSFI	CTRYAG	3 cut(s)	868, 1131, 2349
BstSLI	GKGCMC	2 cut(s)	1324, 2200
BstUI	CGCG	1 cut(s)	8
BstV1I	GCAGC	7 cut(s)	154, 597, 730, 1216, 2014, 2023, 2077
BstV2I	GAAGAC	1 cut(s)	1473
BstX2I	RGATCY	2 cut(s)	1354, 2110
BstYI	RGATCY	2 cut(s)	1354, 2110
BstZI	CGGCCG	1 cut(s)	1620
Bsu15I	ATCGAT	1 cut(s)	96
Bsu36I	CCTNAGG	1 cut(s)	222
BsuRI	GGCC	5 cut(s)	202, 636, 1221, 1622, 2157
BsuTUI	ATCGAT	1 cut(s)	96
BtgI	CCRYGG	1 cut(s)	1913
BtsCI	GGATG	3 cut(s)	487, 2300, 2827
BtsIMutI	CAGTG	1 cut(s)	534
Cac8I	GCNNGC	3 cut(s)	411, 1320, 2155
CfoI	GCGC	2 cut(s)	124, 157
Cfr10I	RCCGGY	3 cut(s)	137, 1851, 2153
Cfr13I	GGNCC	6 cut(s)	918, 1109, 1532, 1559, 1586, 1613
ClaI	ATCGAT	1 cut(s)	96
CseI	GACGC	1 cut(s)	14
Csp6I	GTAC	8 cut(s)	1199, 1478, 1637, 1766, 2346, 2367, 2601, 2710
CviQI	GTAC	8 cut(s)	1199, 1478, 1637, 1766, 2346, 2367, 2601, 2710
DdeI	CTNAG	5 cut(s)	222, 1055, 1398, 1458, 2057
DpnI	GATC	9 cut(s)	95, 99, 659, 689, 1356, 2076, 2112, 2362, 2456
DpnII	GATC	9 cut(s)	93, 97, 657, 687, 1354, 2074, 2110, 2360, 2454
EaeI	YGGCCR	3 cut(s)	200, 1620, 2155
EagI	CGGCCG	1 cut(s)	1620
Eam1104I	CTCTTC	5 cut(s)	747, 1419, 1602, 1887, 2053
EarI	CTCTTC	5 cut(s)	747, 1419, 1602, 1887, 2053
Ecl136II	GAGCTC	1 cut(s)	36
EclXI	CGGCCG	1 cut(s)	1620
Eco130I	CCWWGG	4 cut(s)	1407, 1425, 1913, 2695
Eco24I	GRGCYC	1 cut(s)	38
Eco32I	GATATC	1 cut(s)	876
Eco47I	GGWCC	6 cut(s)	918, 1109, 1532, 1559, 1586, 1613
Eco52I	CGGCCG	1 cut(s)	1620
Eco53kI	GAGCTC	1 cut(s)	36
Eco57I	CTGAAG	7 cut(s)	567, 803, 1065, 1251, 1485, 1521, 1583
Eco81I	CCTNAGG	1 cut(s)	222
Eco88I	CYCGRG	2 cut(s)	285, 2078
EcoICRI	GAGCTC	1 cut(s)	36
EcoRII	CCWGG	6 cut(s)	321, 636, 1216, 1771, 2281, 2725
EcoRV	GATATC	1 cut(s)	876
EcoT14I	CCWWGG	4 cut(s)	1407, 1425, 1913, 2695
EcoT38I	GRGCYC	1 cut(s)	38
ErhI	CCWWGG	4 cut(s)	1407, 1425, 1913, 2695
FalI	AAGNNNNNCTT	4 cut(s)	1038, 1070, 2238, 2270
FaqI	GGGAC	3 cut(s)	1616, 2313, 2799
FokI	GGATG	3 cut(s)	474, 2307, 2814
FriOI	GRGCYC	1 cut(s)	38
FspBI	CTAG	3 cut(s)	747, 1686, 2358
FspI	TGCGCA	2 cut(s)	123, 156
GlaI	GCGC	2 cut(s)	123, 156
GsaI	CCCAGC	1 cut(s)	514
GsuI	CTGGAG	1 cut(s)	1816
HaeIII	GGCC	5 cut(s)	202, 636, 1221, 1622, 2157
HapII	CCGG	6 cut(s)	138, 434, 491, 1634, 1852, 2154
HgaI	GACGC	1 cut(s)	14
HhaI	GCGC	2 cut(s)	124, 157
Hin6I	GCGC	2 cut(s)	122, 155
HinP1I	GCGC	2 cut(s)	122, 155
HpaII	CCGG	6 cut(s)	138, 434, 491, 1634, 1852, 2154
HphI	GGTGA	6 cut(s)	382, 527, 533, 652, 1040, 1388
Hpy166II	GTNNAC	4 cut(s)	918, 1718, 2198, 2369
Hpy188I	TCNGA	9 cut(s)	577, 880, 1002, 1078, 1305, 1446, 1839, 2316, 2634
Hpy8I	GTNNAC	4 cut(s)	918, 1718, 2198, 2369
Hpy99I	CGWCG	1 cut(s)	119
HpyAV	CCTTC	9 cut(s)	67, 512, 778, 1545, 1599, 1626, 1671, 2264, 2300
HpyF10VI	GCNNNNNNNGC	6 cut(s)	76, 173, 251, 2033, 2036, 2438
HpyF3I	CTNAG	5 cut(s)	222, 1055, 1398, 1458, 2057
HspAI	GCGC	2 cut(s)	122, 155
Kpn2I	TCCGGA	2 cut(s)	433, 490
KroI	GCCGGC	1 cut(s)	2153
KroNI	GCCGGC	1 cut(s)	2155
Kzo9I	GATC	9 cut(s)	93, 97, 657, 687, 1354, 2074, 2110, 2360, 2454
LguI	GCTCTTC	3 cut(s)	747, 1419, 1602
LmnI	GCTCC	5 cut(s)	33, 55, 108, 1399, 2437
Lsp1109I	GCAGC	7 cut(s)	154, 597, 730, 1216, 2014, 2023, 2077
LweI	GCATC	8 cut(s)	253, 318, 664, 824, 1305, 2407, 2678, 2810
MaeI	CTAG	3 cut(s)	747, 1686, 2358
MaeIII	GTNAC	7 cut(s)	340, 962, 1101, 2094, 2447, 2639, 2683
MalI	GATC	9 cut(s)	95, 99, 659, 689, 1356, 2076, 2112, 2362, 2456
MboI	GATC	9 cut(s)	93, 97, 657, 687, 1354, 2074, 2110, 2360, 2454
MfeI	CAATTG	1 cut(s)	992
MflI	RGATCY	2 cut(s)	1354, 2110
MhlI	GDGCHC	3 cut(s)	38, 1324, 2200
MluI	ACGCGT	1 cut(s)	6
MlyI	GAGTC	6 cut(s)	53, 997, 1249, 2629, 2638, 2752
MroI	TCCGGA	2 cut(s)	433, 490
MroNI	GCCGGC	1 cut(s)	2153
MroXI	GAANNNNTTC	4 cut(s)	468, 552, 1050, 2310
MspA1I	CMGCKG	2 cut(s)	1541, 1808
MspCI	CTTAAG	1 cut(s)	2099
MspI	CCGG	6 cut(s)	138, 434, 491, 1634, 1852, 2154
MspR9I	CCNGG	7 cut(s)	323, 638, 1218, 1634, 1773, 2283, 2727
MunI	CAATTG	1 cut(s)	992
MvaI	CCWGG	6 cut(s)	323, 638, 1218, 1773, 2283, 2727
MvnI	CGCG	1 cut(s)	8
MwoI	GCNNNNNNNGC	6 cut(s)	76, 173, 251, 2033, 2036, 2438
NaeI	GCCGGC	1 cut(s)	2155
NciI	CCSGG	1 cut(s)	1634
NcoI	CCATGG	1 cut(s)	1913
NdeII	GATC	9 cut(s)	93, 97, 657, 687, 1354, 2074, 2110, 2360, 2454
NgoMIV	GCCGGC	1 cut(s)	2153
NlaIV	GGNNCC	6 cut(s)	1110, 1356, 1995, 2577, 2768, 2840
NmuCI	GTSAC	1 cut(s)	1101
NsbI	TGCGCA	2 cut(s)	123, 156
NspI	RCATGY	5 cut(s)	413, 501, 1159, 1766, 2432
NspV	TTCGAA	1 cut(s)	1382
PaeI	GCATGC	1 cut(s)	413
PaeR7I	CTCGAG	1 cut(s)	2078
PciSI	GCTCTTC	3 cut(s)	747, 1419, 1602
PdiI	GCCGGC	1 cut(s)	2155
PdmI	GAANNNNTTC	4 cut(s)	468, 552, 1050, 2310
PflMI	CCANNNNNTGG	1 cut(s)	2164
PfoI	TCCNGGA	2 cut(s)	2281, 2725
PleI	GAGTC	6 cut(s)	52, 996, 1248, 2628, 2637, 2751
PpsI	GAGTC	6 cut(s)	52, 996, 1248, 2628, 2637, 2751
Psp124BI	GAGCTC	1 cut(s)	38
Psp6I	CCWGG	6 cut(s)	321, 636, 1216, 1771, 2281, 2725
PspFI	CCCAGC	1 cut(s)	510
PspGI	CCWGG	6 cut(s)	321, 636, 1216, 1771, 2281, 2725
PspN4I	GGNNCC	6 cut(s)	1110, 1356, 1995, 2577, 2768, 2840
PspPI	GGNCC	6 cut(s)	918, 1109, 1532, 1559, 1586, 1613
PsrI	GAACNNNNNNTAC	4 cut(s)	2593, 2625, 2627, 2659
PstI	CTGCAG	2 cut(s)	1135, 2353
PsuI	RGATCY	2 cut(s)	1354, 2110
PvuII	CAGCTG	1 cut(s)	1541
RsaI	GTAC	8 cut(s)	1200, 1479, 1638, 1767, 2347, 2368, 2602, 2711
RsaNI	GTAC	8 cut(s)	1199, 1478, 1637, 1766, 2346, 2367, 2601, 2710
SacI	GAGCTC	1 cut(s)	38
SapI	GCTCTTC	3 cut(s)	747, 1419, 1602
Sau3AI	GATC	9 cut(s)	93, 97, 657, 687, 1354, 2074, 2110, 2360, 2454
Sau96I	GGNCC	6 cut(s)	918, 1109, 1532, 1559, 1586, 1613
SchI	GAGTC	6 cut(s)	53, 997, 1249, 2629, 2638, 2752
ScrFI	CCNGG	7 cut(s)	323, 638, 1218, 1634, 1773, 2283, 2727
SduI	GDGCHC	3 cut(s)	38, 1324, 2200
SfaNI	GCATC	8 cut(s)	253, 318, 664, 824, 1305, 2407, 2678, 2810
SfcI	CTRYAG	3 cut(s)	868, 1131, 2349
Sfr274I	CTCGAG	1 cut(s)	2078
SfuI	TTCGAA	1 cut(s)	1382
SinI	GGWCC	6 cut(s)	918, 1109, 1532, 1559, 1586, 1613
SlaI	CTCGAG	1 cut(s)	2078
SmlI	CTYRAG	4 cut(s)	1730, 2078, 2099, 2206
SmoI	CTYRAG	4 cut(s)	1730, 2078, 2099, 2206
SphI	GCATGC	1 cut(s)	413
SsiI	CCGC	4 cut(s)	199, 1244, 1279, 1806
SspMI	CTAG	3 cut(s)	747, 1686, 2358
SstI	GAGCTC	1 cut(s)	38
StyD4I	CCNGG	7 cut(s)	321, 636, 1216, 1632, 1771, 2281, 2725
StyI	CCWWGG	4 cut(s)	1407, 1425, 1913, 2695
TaqI	TCGA	9 cut(s)	96, 328, 1273, 1382, 1484, 2079, 2244, 2453, 2606
TatI	WGTACW	3 cut(s)	1198, 1477, 2709
TauI	GCSGC	3 cut(s)	202, 1281, 1808
TscAI	CASTG	1 cut(s)	534
TseFI	GTSAC	1 cut(s)	1101
TseI	GCWGC	7 cut(s)	167, 610, 743, 1229, 2027, 2036, 2090
Tsp45I	GTSAC	1 cut(s)	1101
TspGWI	ACGGA	1 cut(s)	2006
TspRI	CASTG	1 cut(s)	534
Van91I	CCANNNNNTGG	1 cut(s)	2164
Vha464I	CTTAAG	1 cut(s)	2099
VneI	GTGCAC	1 cut(s)	2196
VpaK11BI	GGWCC	6 cut(s)	918, 1109, 1532, 1559, 1586, 1613
XapI	RAATTY	2 cut(s)	332, 1956
XceI	RCATGY	5 cut(s)	413, 501, 1159, 1766, 2432
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1229
XhoI	CTCGAG	1 cut(s)	2078
XmnI	GAANNNNTTC	4 cut(s)	468, 552, 1050, 2310
XspI	CTAG	3 cut(s)	747, 1686, 2358

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.