Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0009604

Physical Location & Seq

Genomic Coordinates Reverse (-)

20381437 .. 20389249

Gene Structure 7813 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g25100.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3228 bp

ATGGAGGATCCCTCCGAGCTAGAGATTGGGAATTCCGTCGTGTCCTTCCACAAGTTCGTCGACTCGCAGAGGCAGCTATTCCATAGCCAGATCGATGAGCTCCAGAAAATCGTCGTCACTCAATGCAAGCTCACCGGCGCCAATCCTCTCTCCCAGGAGATGGCAGCTGGTGCGCTCTCTATTAATATCGGAAAAAGACCTAGGGATTTGTTGAATCCAAAGGCTATCAAGTATATGCAGTCTGTTTTTTCTGTTAAAGATGCGATTACGAAGAAGGAATCTCGCGAGCTCAGTGCACTGTTCGGGGTTTCCGTCTCGCAGGTTCGTGAATTTTTTAACACTCAACGATCCAGAGTTAGAAAAATAGTTCAGTTGTCAAGGGAGAAGGCCATCAGATCCACTGAGCATAAAGGATTGCTGGAGGGGGTGCCAACAAGCTTTGATCCATTGGTACCAATCAATCCTCTTCCTTTAAACACTATTGGTCCCTCCAATGTTAACCCCCTTCCTTTAAACACTATTGGCCCCTCCGATGTTAATCTCCTTCCTTTAAACACTATTGGCCCCTCCGATGTTAATCCACTTCCTTTAAACACTATTGGTTCCTCCAATTCTAATCCCCTTCCTTTAAACACTGTTGGTCCATCCAATGTTGAGGATGCACCATCTTGCTCAACACAAGATGATACTCCTCCTGGACTAGATGACGTTGATAAACATTTTGTTGAAAATATTTTCAACTTGATGCGGAAAGAAGAAACATTTTCTGGGCAAGTGAAAGTGTTAGAGTTGATATTGCGGATACAAAATTCTTCAGTATTATGCTGGTTTTTAACTAAAGGTGGCGTGATGATTTTAGTAACATGGTTGACTCAAGCAGCTGATGAAGAACAAACGAGTGTTATACTTGTCATCTTAAAGGTTCTTTGTCATTTGCCTCTATCCAAAGCTCTTCCTGCACATATGTCAGCCATACTGCAAAGTGTCAATAGATTGCGCTTCTACAGGACATCAGAAATATCAAACAGGGCAAGGGTTTTGTTATCAAGATGGAGCAAATCAATAGCAAGAACCCAAGCTTTGAAGAAACCGAATGGTGTGAAAACATCTGATGATTCACAAGAATTGGCATTGCTGAAGCGAAGTATTGATGAAGCTATAGGTGATGATCCATGGAACTCGAATGGTGATGTTCACGAAAACATCCTTGCATTGCCATTTGAAAGTGCTGATAGATTAAGGAAATCTGAGTCTTCAGAACCAATGAAGCTACTGACAGCATCATCAGATGATTTGAATAAGAAACACATCCTAGGTGTATCTTCATCCCTATTTAGAGGACGTAGGAAAGTTCAATTGGTGGAACAGCCAGGCCAAAAGACAGCTGGGAGAAGTTCACAGGCTGCAAGAGCAACACCTGTCAGTCAGGCTCGCCCAATGTCTGTTGATGATATCCAAAAAGCAAAATTGCGAGCACAATATATGCAAAGCAAGTATGGAAAGTCTGCTTCCTCTAATGAAAATAAAGAAGTGAAGGCTGAAGGTGTGAACAAACTTCCAGTCTCTCAGGCCAGCACTTTGCCTGTAGTATCCATTGTTCCAGTTCAGTCCAGCATTGAGGAATCCAAGAAACCTGCAACACTTCCATTTAAAGAGAGGGAAACTCCTGATATGAGTGTACAGTCTATTGCGAGTTTCCAGCCTATCGCTCCAAAGCTGAAAACAGATATAAAGGAGCACATCTGGGAGAAGTGCAGGAGAGTTCAGGTGCCGTGGAAGACTCCACCAGAAATTAAACTCAATCCAGAATGGAGGGTTGGAGGTGGTGAGAATGGCAAAGAAATGGAAGTCCAGAAAAACAGAAACCACCGTGAGCAGGAAACTATCTACAAGACATTGAAGGAGATACCACCTAACCCGAAGGAACCTTGGGATATTGAAATGGACTATGATGACTCATTGACTCCAGTAATACCAACAGAACAGCCTCCTGACAGTGATTGTACTGAAACACAACCTTCCCATAGTCAAGAAGTAAATAATGCAGCAGAAACGTTGGCCCCTCCTCCTCAAGGAGTAAACAGTGTTATTTCGCCGCCAACTAATACGGCAAGCAGCACAGCCGCACCAGATCTAGAGTTGCTTGCTGTGCTGCTAAAAAATCCAGAATTGGTGTTCGCCTTAACTTCTGGGCAGGCCGCTAACTTGTCGAGTGAGGATACAGTAAAATTGCTGGATATGATTAAGGCTGGTGGGGCTGGTTTTGCTGGTAGTTTAAACGGGTTAGCTAGTAAAATGGAGGAGAAGGTTGAAGTTTCTCTTCCATCCCCAACACCTTCAAGCGACCCTGGAACGAGTGGATGGAGACCAGAAGCTACAAGGAATGCATTTTCCCAACAAAACTCGATGCAGAACCGAGTGAGCCCTGGTTACAGTTCACCAGCAATGGTGGCCAACAACTCGGTGCTGTCACAGCTTCCATCAGCTCTTACTAGTCCTCTTCCGCAGCGGCTATTGGGTGCCCAACAAGCAGTACCTGCATATTCACCAGAGCATGTCCATCAAATTCCCCACAGTACTACCGTACCATCACACTTGCAGCATAACTATTCAAACATGGCTGTTCCTTCTGTTTGGGGTGAAAGCACAAGTAATCGCAAACCAGGCCCGCTGTATAACTCGTATAATGTAGCAGCAGAAAGGCAGCCTAACTCGCTGCCACCACCCTTCTTGCCCACTCTGACACACCAACAAAGACACTCCCCGCAACCACTGCAACAACAAACCCCTTACTCTGAGTCTCATTATTCAGAGTCTCCCCAATACTCCGAGTCACCCTATTTCTCTAAACCACCAACTGTGAAACAAGGCCCTCCTCTGTCTGATTCATGGAGATCTGGTAGGCAGGGTTTACCTTCGAACTATCATTATTTAGAGAACCAAAATCAGTACTACAATGCACCACCATCATATGGAGGACCTTTGCAGCAACAACCTCAGTTGAGGTCGGGTCCTCCTTGTGAAGGAAATGAATTTGTGAACAATGGAGGAGGTTTTGAATCGTGGAGTCCTCCAGAGGATAGTCCGGCTAGAAATGCCGAGTATAACATGTATGGAAGAAACGCTTACAGGCCTGTGGAAAGGTCGAGGCAAACTCAGACTCCTGGATACCGAGATTATAGTAGGCAGGGACAAACGTGGCCTGACCGCGGCAGATTCACACAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009791 GO:0009889 GO:0010228 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox

Protein Analysis

1076

Amino Acids

118.52

Weight (kDa)

7.64

Isoelectric Point (pI)

59.59

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009604)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02560 AT4G02560
fragaria_vesca	FvH4_2g25100 FvH4_2g25100 FvH4_2g25100
malus_domestica	MD03G1284300.v1.1 MD11G1302000.v1.1
prunus_persica	Prupe.8G255600_v2.0.a1 Prupe.8G255600_v2.0.a1
pyrus_communis	pycom03g22510 pycom11g26460
rosa_chinensis	RchiOBHm_Chr6g0293161
rosa_laevigata	RLG00000011970
rosa_multiflora	Rmu_sc0014786.1_g000002
rosa_roxburghii	Rroxscaffold_7G00174400
rosa_rugosa	Rorug06G0233000 Rorug06G0233100
rosa_samantha	Rh6AG345700 Rh6BG353500 Rh6CG359900 Rh6DG346300
rosa_wichuraiana	Rw6G030130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	3 cut(s)	310, 1642, 2545
Acc65I	GGTACC	1 cut(s)	451
AccB1I	GGYRCC	5 cut(s)	137, 427, 451, 1768, 2519
AccB7I	CCANNNNNTGG	2 cut(s)	160, 2972
AccI	GTMKAC	1 cut(s)	60
AccII	CGCG	2 cut(s)	285, 3210
AclI	AACGTT	1 cut(s)	2054
AclWI	GGATC	6 cut(s)	2, 15, 342, 390, 437, 1163
AcoI	YGGCCR	1 cut(s)	2451
AcsI	RAATTY	5 cut(s)	31, 329, 808, 2565, 3032
AcuI	CTGAAG	4 cut(s)	798, 1157, 1239, 1560
AcyI	GRCGYC	1 cut(s)	138
AfaI	GTAC	7 cut(s)	453, 1680, 2005, 2535, 2578, 2586, 2951
AfiI	CCNNNNNNNGG	6 cut(s)	160, 1876, 2072, 2972, 3023, 3209
AflIII	ACRYGT	1 cut(s)	3108
AhlI	ACTAGT	1 cut(s)	2492
AjnI	CCWGG	7 cut(s)	153, 694, 1369, 2347, 2425, 2662, 3163
AjuI	GAANNNNNNNTTGG	4 cut(s)	1340, 1372, 1800, 1832
Alw21I	GWGCWC	5 cut(s)	102, 291, 298, 1477, 1740
Alw26I	GTCTC	5 cut(s)	319, 1567, 2359, 2805, 2820
Alw44I	GTGCAC	1 cut(s)	294
AlwI	GGATC	6 cut(s)	2, 15, 342, 390, 437, 1163
AlwNI	CAGNNNCTG	1 cut(s)	2537
ApaLI	GTGCAC	1 cut(s)	294
ApoI	RAATTY	5 cut(s)	31, 329, 808, 2565, 3032
ArsI	GACNNNNNNTTYG	2 cut(s)	1545, 1577
AseI	ATTAAT	1 cut(s)	183
Asp718I	GGTACC	1 cut(s)	451
AspA2I	CCTAGG	2 cut(s)	200, 1312
AspLEI	GCGC	3 cut(s)	140, 175, 999
AspS9I	GGNCC	9 cut(s)	485, 524, 563, 641, 2059, 2666, 2870, 2978, 3011
AsuHPI	GGTGA	8 cut(s)	124, 1175, 1199, 1838, 2430, 2538, 2651, 2826
AsuII	TTCGAA	1 cut(s)	2918
AvaII	GGWCC	4 cut(s)	485, 641, 2978, 3011
AvrII	CCTAGG	2 cut(s)	200, 1312
BaeGI	GKGCMC	2 cut(s)	298, 2524
BaeI	ACNNNNGTAYC	2 cut(s)	2568, 2601
BalI	TGGCCA	1 cut(s)	2453
BamHI	GGATCC	1 cut(s)	7
BanI	GGYRCC	5 cut(s)	137, 427, 451, 1768, 2519
BanII	GRGCYC	3 cut(s)	102, 291, 2426
BbsI	GAAGAC	2 cut(s)	1245, 1784
Bbv12I	GWGCWC	5 cut(s)	102, 291, 298, 1477, 1740
BceAI	ACGGC	2 cut(s)	1756, 2124
BcgI	CGANNNNNNTGC	2 cut(s)	275, 309
BciT130I	CCWGG	7 cut(s)	155, 696, 1371, 2349, 2427, 2664, 3165
BciVI	GTATCC	4 cut(s)	795, 1600, 2212, 3161
BcoDI	GTCTC	5 cut(s)	319, 1567, 2359, 2805, 2820
BcuI	ACTAGT	1 cut(s)	2492
BfaI	CTAG	8 cut(s)	20, 201, 701, 1313, 2135, 2289, 2493, 3090
BfmI	CTRYAG	3 cut(s)	1003, 1158, 1584
BfoI	RGCGCY	1 cut(s)	141
BfuAI	ACCTGC	3 cut(s)	310, 1642, 2545
BfuI	GTATCC	4 cut(s)	795, 1600, 2212, 3161
BglII	AGATCT	2 cut(s)	2131, 2894
BlnI	CCTAGG	2 cut(s)	200, 1312
BmcAI	AGTACT	2 cut(s)	2578, 2951
Bme1390I	CCNGG	7 cut(s)	155, 696, 1371, 2349, 2427, 2664, 3165
Bme18I	GGWCC	4 cut(s)	485, 641, 2978, 3011
BmgT120I	GGNCC	9 cut(s)	485, 524, 563, 641, 2059, 2666, 2870, 2978, 3011
BmrFI	CCNGG	7 cut(s)	155, 696, 1371, 2349, 2427, 2664, 3165
BmsI	GCATC	5 cut(s)	250, 649, 735, 1289, 2397
BpiI	GAAGAC	2 cut(s)	1245, 1784
BplI	GAGNNNNNCTC	5 cut(s)	28, 1648, 1680, 3139, 3171
BpmI	CTGGAG	4 cut(s)	86, 440, 1950, 3057
Bpu14I	TTCGAA	1 cut(s)	2918
BpuEI	CTTGAG	2 cut(s)	858, 2055
Bsa29I	ATCGAT	1 cut(s)	93
BsaBI	GATNNNNATC	2 cut(s)	537, 576
BsaHI	GRCGYC	1 cut(s)	138
BsaI	GGTCTC	1 cut(s)	2359
BsaJI	CCNNGG	9 cut(s)	153, 200, 1172, 1312, 1772, 1928, 2347, 2425, 3208
BsaXI	ACNNNNNCTCC	4 cut(s)	2884, 2914, 3145, 3175
Bsc4I	CCNNNNNNNGG	6 cut(s)	160, 1876, 2072, 2972, 3023, 3209
Bse118I	RCCGGY	1 cut(s)	134
Bse1I	ACTGG	3 cut(s)	1559, 1601, 1967
Bse3DI	GCAATG	3 cut(s)	1130, 1211, 2451
Bse8I	GATNNNNATC	2 cut(s)	537, 576
BseBI	CCWGG	7 cut(s)	155, 696, 1371, 2349, 2427, 2664, 3165
BseCI	ATCGAT	1 cut(s)	93
BseDI	CCNNGG	9 cut(s)	153, 200, 1172, 1312, 1772, 1928, 2347, 2425, 3208
BseGI	GGATG	7 cut(s)	644, 664, 1203, 1308, 1325, 2324, 2366
BseJI	GATNNNNATC	2 cut(s)	537, 576
BseLI	CCNNNNNNNGG	6 cut(s)	160, 1876, 2072, 2972, 3023, 3209
BseMI	GCAATG	3 cut(s)	1130, 1211, 2451
BseMII	CTCAG	7 cut(s)	304, 393, 1239, 1580, 2787, 3011, 3170
BseNI	ACTGG	3 cut(s)	1559, 1601, 1967
BseRI	GAGGAG	6 cut(s)	681, 2055, 2058, 2315, 2865, 3063
BseSI	GKGCMC	2 cut(s)	298, 2524
BseYI	CCCAGC	1 cut(s)	1385
BsgI	GTGCAG	2 cut(s)	942, 1774
Bsh1236I	CGCG	2 cut(s)	285, 3210
BshNI	GGYRCC	5 cut(s)	137, 427, 451, 1768, 2519
BshVI	ATCGAT	1 cut(s)	93
BsiHKAI	GWGCWC	5 cut(s)	102, 291, 298, 1477, 1740
BsiSI	CCGG	2 cut(s)	135, 3086
BslFI	GGGAC	2 cut(s)	471, 3204
BslI	CCNNNNNNNGG	6 cut(s)	160, 1876, 2072, 2972, 3023, 3209
BsmAI	GTCTC	5 cut(s)	319, 1567, 2359, 2805, 2820
BsmBI	CGTCTC	1 cut(s)	319
BsmFI	GGGAC	2 cut(s)	471, 3204
BsmI	GAATGC	1 cut(s)	2389
Bso31I	GGTCTC	1 cut(s)	2359
Bsp119I	TTCGAA	1 cut(s)	2918
Bsp1286I	GDGCHC	7 cut(s)	102, 291, 298, 1477, 1740, 2426, 2524
Bsp1407I	TGTACA	1 cut(s)	1678
Bsp143I	GATC	8 cut(s)	7, 90, 347, 395, 442, 1168, 2131, 2894
Bsp19I	CCATGG	1 cut(s)	1172
Bsp68I	TCGCGA	1 cut(s)	285
BspCNI	CTCAG	7 cut(s)	303, 394, 1240, 1579, 2788, 3010, 3169
BspDI	ATCGAT	1 cut(s)	93
BspFNI	CGCG	2 cut(s)	285, 3210
BspMI	ACCTGC	3 cut(s)	310, 1642, 2545
BspPI	GGATC	6 cut(s)	2, 15, 342, 390, 437, 1163
BspQI	GCTCTTC	1 cut(s)	957
BspT104I	TTCGAA	1 cut(s)	2918
BspT107I	GGYRCC	5 cut(s)	137, 427, 451, 1768, 2519
BspTNI	GGTCTC	1 cut(s)	2359
BsrDI	GCAATG	3 cut(s)	1130, 1211, 2451
BsrFI	RCCGGY	1 cut(s)	134
BsrGI	TGTACA	1 cut(s)	1678
BsrI	ACTGG	3 cut(s)	1559, 1601, 1967
BssAI	RCCGGY	1 cut(s)	134
BssECI	CCNNGG	9 cut(s)	153, 200, 1172, 1312, 1772, 1928, 2347, 2425, 3208
BssMI	GATC	8 cut(s)	7, 90, 347, 395, 442, 1168, 2131, 2894
BssNI	GRCGYC	1 cut(s)	138
BssT1I	CCWWGG	4 cut(s)	200, 1172, 1312, 1928
Bst2UI	CCWGG	7 cut(s)	155, 696, 1371, 2349, 2427, 2664, 3165
Bst6I	CTCTTC	4 cut(s)	471, 957, 2325, 2505
BstACI	GRCGYC	1 cut(s)	138
BstAPI	GCANNNNNTGC	3 cut(s)	170, 2537, 2773
BstAUI	TGTACA	1 cut(s)	1678
BstBI	TTCGAA	1 cut(s)	2918
BstC8I	GCNNGC	9 cut(s)	128, 287, 1432, 1473, 1573, 2113, 2145, 2196, 2669
BstDEI	CTNAG	7 cut(s)	290, 402, 1248, 1566, 2796, 2997, 3156
BstDSI	CCRYGG	3 cut(s)	1172, 1772, 3208
BstENI	CCTNNNNNAGG	2 cut(s)	2070, 3021
BstF5I	GGATG	7 cut(s)	644, 664, 1203, 1308, 1325, 2324, 2366
BstFNI	CGCG	2 cut(s)	285, 3210
BstH2I	RGCGCY	1 cut(s)	141
BstHHI	GCGC	3 cut(s)	140, 175, 999
BstKTI	GATC	8 cut(s)	10, 93, 350, 398, 445, 1171, 2134, 2897
BstMAI	GTCTC	5 cut(s)	319, 1567, 2359, 2805, 2820
BstMBI	GATC	8 cut(s)	7, 90, 347, 395, 442, 1168, 2131, 2894
BstNI	CCWGG	7 cut(s)	155, 696, 1371, 2349, 2427, 2664, 3165
BstNSI	RCATGY	2 cut(s)	2558, 3112
BstSCI	CCNGG	7 cut(s)	153, 694, 1369, 2347, 2425, 2662, 3163
BstSFI	CTRYAG	3 cut(s)	1003, 1158, 1584
BstSLI	GKGCMC	2 cut(s)	298, 2524
BstUI	CGCG	2 cut(s)	285, 3210
BstV2I	GAAGAC	2 cut(s)	1245, 1784
BstX2I	RGATCY	4 cut(s)	7, 395, 2131, 2894
BstYI	RGATCY	4 cut(s)	7, 395, 2131, 2894
Bsu15I	ATCGAT	1 cut(s)	93
BsuI	GTATCC	4 cut(s)	795, 1600, 2212, 3161
BsuTUI	ATCGAT	1 cut(s)	93
BtgI	CCRYGG	3 cut(s)	1172, 1772, 3208
BtsCI	GGATG	7 cut(s)	644, 664, 1203, 1308, 1325, 2324, 2366
BtsI	GCAGTG	1 cut(s)	2771
BtsIMutI	CAGTG	7 cut(s)	296, 298, 399, 633, 2002, 2089, 2771
BtuMI	TCGCGA	1 cut(s)	285
BveI	ACCTGC	3 cut(s)	310, 1642, 2545
Cac8I	GCNNGC	9 cut(s)	128, 287, 1432, 1473, 1573, 2113, 2145, 2196, 2669
CaiI	CAGNNNCTG	1 cut(s)	2537
CfoI	GCGC	3 cut(s)	140, 175, 999
Cfr10I	RCCGGY	1 cut(s)	134
Cfr13I	GGNCC	9 cut(s)	485, 524, 563, 641, 2059, 2666, 2870, 2978, 3011
Cfr42I	CCGCGG	1 cut(s)	3211
ClaI	ATCGAT	1 cut(s)	93
Csp6I	GTAC	7 cut(s)	452, 1679, 2004, 2534, 2577, 2585, 2950
CspCI	CAANNNNNGTGG	2 cut(s)	2712, 2747
CviAII	CATG	6 cut(s)	864, 1173, 2555, 2617, 2889, 3109
CviQI	GTAC	7 cut(s)	452, 1679, 2004, 2534, 2577, 2585, 2950
DdeI	CTNAG	7 cut(s)	290, 402, 1248, 1566, 2796, 2997, 3156
DinI	GGCGCC	1 cut(s)	139
DpnI	GATC	8 cut(s)	9, 92, 349, 397, 444, 1170, 2133, 2896
DpnII	GATC	8 cut(s)	7, 90, 347, 395, 442, 1168, 2131, 2894
DraI	TTTAAA	7 cut(s)	474, 513, 552, 591, 630, 1651, 2277
EaeI	YGGCCR	1 cut(s)	2451
Eam1104I	CTCTTC	4 cut(s)	471, 957, 2325, 2505
EarI	CTCTTC	4 cut(s)	471, 957, 2325, 2505
Ecl136II	GAGCTC	2 cut(s)	100, 289
Eco130I	CCWWGG	4 cut(s)	200, 1172, 1312, 1928
Eco147I	AGGCCT	1 cut(s)	3133
Eco24I	GRGCYC	3 cut(s)	102, 291, 2426
Eco31I	GGTCTC	1 cut(s)	2359
Eco32I	GATATC	1 cut(s)	1453
Eco47I	GGWCC	4 cut(s)	485, 641, 2978, 3011
Eco53kI	GAGCTC	2 cut(s)	100, 289
Eco57I	CTGAAG	4 cut(s)	798, 1157, 1239, 1560
EcoICRI	GAGCTC	2 cut(s)	100, 289
EcoNI	CCTNNNNNAGG	2 cut(s)	2070, 3021
EcoO109I	RGGNCCY	3 cut(s)	2870, 2978, 3011
EcoRI	GAATTC	1 cut(s)	31
EcoRII	CCWGG	7 cut(s)	153, 694, 1369, 2347, 2425, 2662, 3163
EcoRV	GATATC	1 cut(s)	1453
EcoT14I	CCWWGG	4 cut(s)	200, 1172, 1312, 1928
EcoT22I	ATGCAT	1 cut(s)	2389
EcoT38I	GRGCYC	3 cut(s)	102, 291, 2426
EgeI	GGCGCC	1 cut(s)	139
EheI	GGCGCC	1 cut(s)	139
ErhI	CCWWGG	4 cut(s)	200, 1172, 1312, 1928
Esp3I	CGTCTC	1 cut(s)	319
FaeI	CATG	6 cut(s)	867, 1176, 2558, 2620, 2892, 3112
FalI	AAGNNNNNCTT	4 cut(s)	2304, 2336, 3109, 3141
FaqI	GGGAC	2 cut(s)	471, 3204
FatI	CATG	6 cut(s)	863, 1172, 2554, 2616, 2888, 3108
FauI	CCCGC	2 cut(s)	2676, 2772
FauNDI	CATATG	2 cut(s)	963, 2971
FblI	GTMKAC	1 cut(s)	60
FokI	GGATG	7 cut(s)	631, 671, 1190, 1295, 1312, 2311, 2373
FriOI	GRGCYC	3 cut(s)	102, 291, 2426
FspBI	CTAG	8 cut(s)	20, 201, 701, 1313, 2135, 2289, 2493, 3090
GlaI	GCGC	3 cut(s)	139, 174, 998
GsaI	CCCAGC	1 cut(s)	1389
GsuI	CTGGAG	4 cut(s)	86, 440, 1950, 3057
HaeII	RGCGCY	1 cut(s)	141
HapII	CCGG	2 cut(s)	135, 3086
HhaI	GCGC	3 cut(s)	140, 175, 999
Hin1I	GRCGYC	1 cut(s)	138
Hin1II	CATG	6 cut(s)	867, 1176, 2558, 2620, 2892, 3112
Hin6I	GCGC	3 cut(s)	138, 173, 997
HinP1I	GCGC	3 cut(s)	138, 173, 997
HincII	GTYRAC	3 cut(s)	61, 499, 870
HindII	GTYRAC	3 cut(s)	61, 499, 870
HindIII	AAGCTT	2 cut(s)	436, 1077
HpaI	GTTAAC	1 cut(s)	499
HpaII	CCGG	2 cut(s)	135, 3086
HphI	GGTGA	8 cut(s)	124, 1175, 1199, 1838, 2430, 2538, 2651, 2826
Hpy99I	CGWCG	3 cut(s)	41, 62, 116
HpyCH4IV	ACGT	4 cut(s)	708, 1342, 2054, 3197
HpyF3I	CTNAG	7 cut(s)	290, 402, 1248, 1566, 2796, 2997, 3156
HpySE526I	ACGT	4 cut(s)	708, 1342, 2054, 3197
Hsp92I	GRCGYC	1 cut(s)	138
Hsp92II	CATG	6 cut(s)	867, 1176, 2558, 2620, 2892, 3112
HspAI	GCGC	3 cut(s)	138, 173, 997
KasI	GGCGCC	1 cut(s)	137
KpnI	GGTACC	1 cut(s)	455
KspAI	GTTAAC	1 cut(s)	499
KspI	CCGCGG	1 cut(s)	3211
Kzo9I	GATC	8 cut(s)	7, 90, 347, 395, 442, 1168, 2131, 2894
LguI	GCTCTTC	1 cut(s)	957
LmnI	GCTCC	4 cut(s)	105, 1053, 1714, 1735
LweI	GCATC	5 cut(s)	250, 649, 735, 1289, 2397
MaeI	CTAG	8 cut(s)	20, 201, 701, 1313, 2135, 2289, 2493, 3090
MaeII	ACGT	4 cut(s)	708, 1342, 2054, 3197
MaeIII	GTNAC	5 cut(s)	115, 859, 2429, 2469, 2832
MalI	GATC	8 cut(s)	9, 92, 349, 397, 444, 1170, 2133, 2896
MboI	GATC	8 cut(s)	7, 90, 347, 395, 442, 1168, 2131, 2894
MfeI	CAATTG	1 cut(s)	1355
MflI	RGATCY	4 cut(s)	7, 395, 2131, 2894
MhlI	GDGCHC	7 cut(s)	102, 291, 298, 1477, 1740, 2426, 2524
MlsI	TGGCCA	1 cut(s)	2453
MluNI	TGGCCA	1 cut(s)	2453
Mly113I	GGCGCC	1 cut(s)	138
MmeI	TCCRAC	1 cut(s)	1798
Mox20I	TGGCCA	1 cut(s)	2453
Mph1103I	ATGCAT	1 cut(s)	2389
MscI	TGGCCA	1 cut(s)	2453
Msp20I	TGGCCA	1 cut(s)	2453
MspA1I	CMGCKG	6 cut(s)	167, 881, 1385, 2509, 2671, 3210
MspI	CCGG	2 cut(s)	135, 3086
MspR9I	CCNGG	7 cut(s)	155, 696, 1371, 2349, 2427, 2664, 3165
MssI	GTTTAAAC	1 cut(s)	2277
MunI	CAATTG	1 cut(s)	1355
Mva1269I	GAATGC	1 cut(s)	2389
MvaI	CCWGG	7 cut(s)	155, 696, 1371, 2349, 2427, 2664, 3165
MvnI	CGCG	2 cut(s)	285, 3210
NarI	GGCGCC	1 cut(s)	138
NcoI	CCATGG	1 cut(s)	1172
NdeI	CATATG	2 cut(s)	963, 2971
NdeII	GATC	8 cut(s)	7, 90, 347, 395, 442, 1168, 2131, 2894
NlaIII	CATG	6 cut(s)	867, 1176, 2558, 2620, 2892, 3112
NmeAIII	GCCGAG	1 cut(s)	3124
NmuCI	GTSAC	3 cut(s)	115, 2469, 2832
NruI	TCGCGA	1 cut(s)	285
NsiI	ATGCAT	1 cut(s)	2389
NspI	RCATGY	2 cut(s)	2558, 3112
NspV	TTCGAA	1 cut(s)	2918
PceI	AGGCCT	1 cut(s)	3133
PciI	ACATGT	1 cut(s)	3108
PciSI	GCTCTTC	1 cut(s)	957
PcsI	WCGNNNNNNNCGW	1 cut(s)	309
PctI	GAATGC	1 cut(s)	2389
PfeI	GAWTC	7 cut(s)	214, 278, 1115, 1622, 2885, 3059, 3216
PflMI	CCANNNNNTGG	2 cut(s)	160, 2972
PfoI	TCCNGGA	2 cut(s)	694, 3163
PluTI	GGCGCC	1 cut(s)	141
PmeI	GTTTAAAC	1 cut(s)	2277
PpuMI	RGGWCCY	2 cut(s)	2978, 3011
PscI	ACATGT	1 cut(s)	3108
PshBI	ATTAAT	1 cut(s)	183
Psp124BI	GAGCTC	2 cut(s)	102, 291
Psp1406I	AACGTT	1 cut(s)	2054
Psp5II	RGGWCCY	2 cut(s)	2978, 3011
Psp6I	CCWGG	7 cut(s)	153, 694, 1369, 2347, 2425, 2662, 3163
PspFI	CCCAGC	1 cut(s)	1385
PspGI	CCWGG	7 cut(s)	153, 694, 1369, 2347, 2425, 2662, 3163
PspPI	GGNCC	9 cut(s)	485, 524, 563, 641, 2059, 2666, 2870, 2978, 3011
PspPPI	RGGWCCY	2 cut(s)	2978, 3011
PsrI	GAACNNNNNNTAC	2 cut(s)	1581, 1613
PstNI	CAGNNNCTG	1 cut(s)	2537
PsuI	RGATCY	4 cut(s)	7, 395, 2131, 2894
PvuII	CAGCTG	3 cut(s)	167, 881, 1385
RruI	TCGCGA	1 cut(s)	285
RsaI	GTAC	7 cut(s)	453, 1680, 2005, 2535, 2578, 2586, 2951
RsaNI	GTAC	7 cut(s)	452, 1679, 2004, 2534, 2577, 2585, 2950
SacI	GAGCTC	2 cut(s)	102, 291
SacII	CCGCGG	1 cut(s)	3211
SalI	GTCGAC	1 cut(s)	59
SapI	GCTCTTC	1 cut(s)	957
Sau3AI	GATC	8 cut(s)	7, 90, 347, 395, 442, 1168, 2131, 2894
Sau96I	GGNCC	9 cut(s)	485, 524, 563, 641, 2059, 2666, 2870, 2978, 3011
ScaI	AGTACT	2 cut(s)	2578, 2951
ScrFI	CCNGG	7 cut(s)	155, 696, 1371, 2349, 2427, 2664, 3165
SduI	GDGCHC	7 cut(s)	102, 291, 298, 1477, 1740, 2426, 2524
SfaNI	GCATC	5 cut(s)	250, 649, 735, 1289, 2397
SfcI	CTRYAG	3 cut(s)	1003, 1158, 1584
SfoI	GGCGCC	1 cut(s)	139
Sfr303I	CCGCGG	1 cut(s)	3211
SfuI	TTCGAA	1 cut(s)	2918
SgrAI	CRCCGGYG	1 cut(s)	134
SgrBI	CCGCGG	1 cut(s)	3211
SinI	GGWCC	4 cut(s)	485, 641, 2978, 3011
SmlI	CTYRAG	2 cut(s)	873, 2070
SmoI	CTYRAG	2 cut(s)	873, 2070
SpeI	ACTAGT	1 cut(s)	2492
SseBI	AGGCCT	1 cut(s)	3133
SspDI	GGCGCC	1 cut(s)	137
SspI	AATATT	1 cut(s)	733
SspMI	CTAG	8 cut(s)	20, 201, 701, 1313, 2135, 2289, 2493, 3090
SstI	GAGCTC	2 cut(s)	102, 291
StuI	AGGCCT	1 cut(s)	3133
StyD4I	CCNGG	7 cut(s)	153, 694, 1369, 2347, 2425, 2662, 3163
StyI	CCWWGG	4 cut(s)	200, 1172, 1312, 1928
TaiI	ACGT	4 cut(s)	711, 1345, 2057, 3200
TaqI	TCGA	7 cut(s)	60, 93, 1181, 2210, 2405, 2918, 3146
TatI	WGTACW	4 cut(s)	1678, 2003, 2576, 2949
TauI	GCSGC	5 cut(s)	2098, 2126, 2201, 2512, 3213
TfiI	GAWTC	7 cut(s)	214, 278, 1115, 1622, 2885, 3059, 3216
TscAI	CASTG	7 cut(s)	298, 303, 406, 640, 2002, 2089, 2778
TseFI	GTSAC	3 cut(s)	115, 2469, 2832
Tsp45I	GTSAC	3 cut(s)	115, 2469, 2832
TspDTI	ATGAA	7 cut(s)	900, 1167, 1280, 1314, 1533, 2877, 3045
TspGWI	ACGGA	2 cut(s)	25, 301
TspRI	CASTG	7 cut(s)	298, 303, 406, 640, 2002, 2089, 2778
Van91I	CCANNNNNTGG	2 cut(s)	160, 2972
VneI	GTGCAC	1 cut(s)	294
VpaK11BI	GGWCC	4 cut(s)	485, 641, 2978, 3011
VspI	ATTAAT	1 cut(s)	183
XagI	CCTNNNNNAGG	2 cut(s)	2070, 3021
XapI	RAATTY	5 cut(s)	31, 329, 808, 2565, 3032
XbaI	TCTAGA	1 cut(s)	2134
XceI	RCATGY	2 cut(s)	2558, 3112
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1382
XmaJI	CCTAGG	2 cut(s)	200, 1312
XmiI	GTMKAC	1 cut(s)	60
XspI	CTAG	8 cut(s)	20, 201, 701, 1313, 2135, 2289, 2493, 3090
ZrmI	AGTACT	2 cut(s)	2578, 2951
Zsp2I	ATGCAT	1 cut(s)	2389

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.